Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

35652984 .. 35655323

Gene Structure 2340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00194000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGGAAGCCAAGTGCCATTCACCACAGCTCGGCTTTCGTACTCGGAATTCACTTACAGATTTCCAGTAAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCCCAGCTACATACAACGCGGACTTCGATAGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACACACTTCTCAAGGACTTCAACGCTTCTCTCGGTACTATCTACTATAACTCTGAGACACTACTTAGTGAATTCTGCCTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACATTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTCGGCAGCCCAAGGCGATGGGGCTAGTTATCTCGACAGCATCGGTAGCAGATATTATGTTGAAAACAACACCGCACTGGAGATGATCTTCCGAATCAACGTTGGTGGCAGCCCAGTATCTCCGAATGAAGACACCGGCATGTACCGCACCTGGAATCCAGTCGACGATCACTACTTAGATGATGTAAGTCAAAATTGGAGCATTGCACGACCAAGATATAATACTCCTCTCAATTTTGCAAAAATCCCTAACTACACTGCGCCCGAAGAGGTGTACCGAACGGGCCGGACAATGGGAGGGAACAAAACCATCAACAAGAGCTACAATCTCACCTGGGGATTCCCTGTAGATCCCGACTTTTCTTACCTGGTGACTTTTCTATGGACTACAGAAAATGGAATCGGAAATGGGATTCCCATATATAGGGACTACTTTGTGCCGATGCTGAATCTTGGAACCCAGAAGAAAGGTTTTGTTAATCTCTTTGTTGCACTACAAGCATATCCAGACGATAGCCAAACTCGATATAACGATGCAATCTTGAATGGGCTGGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGGCCCATCCCCGAGCTACCGAATATCCCGCCAAAGGTGACGTCGGAAAGCTCTAGAAACTCGAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGGTGTAGTTTCGGCCTTACTTGTTCTTTCCTTCCTCGGGTTTTTAGTTTTCAGGCGTGGAGGAAAAGTCAAGGATTCCAACTCCAGCCACAGGATGACGACGTCAACCATGACCCTTAGATCACCTTATCCATCTCATTTGTGCCGTGACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAAAACTTCGATGACACTTTAATCATTGGAGTTGGTGGGTTTGGCCATGTCTACAAAGGATACTTCGACAATGGGGCCACCCTTGTGGCAATCAAAAGGCTGAAAGCCACTTCATCGCAGGGCGCCCACGAGTTCATGACGGAAATCAAAATGCTCTCCCGATTGCGCCACTGTCATTTGGTTTCTCTTATAGGATTTTGTGCCGATCAAGGTGAGATGATCTTAGTCTACGATTACATGGCACATGGGACCCTCAGTGATCATTTGCACCGGACCAAGGAACCACATCTTCCTTGGAAACTACGGCTTCACATTTGTATTGGTGCAGCACAAGGTTTGCACTACCTTCACACAGTGTTATGCGAGGTATTGTGTGGGAGGCCAGCTGTGACCATTGTAGATAATAATAGAGTTGGGCTAGCTGGATGGGTCAAGAAGTGTCATCATGAAGGGAAACTTGATCAAGTTGTTGACCCCAATTTGGAAGGTGAAATTGCATTGCGATGCTTGCATAAATTTGTTTCCATCGCAATCAGTTGCATGGATGATAATGGGATCAATCGGCCGTCAATGGAGAATGTTGTGAGAGGGCTTCAATTTGCATTTGAAATGCAACAGAACAACGAGAATTATATTGATCACATTGAAAGGAAGGTTCAAGATGAGATTGGATTGATCAAGGACAATGAAGGGTCTAGTTCTAGAGAGCGAAGCAGTGGGGCTACAGAATCCATCCAAAGGTTGACCGGGACAATCTTCTCCGAGATCATCGATCCAGTTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

672

Amino Acids

75.06

Weight (kDa)

6.56

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	6 - 246	1.9e-14	Malectin-like domain
Pkinase	PF00069	418 - 528	7.4e-17	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	419 - 528	1.6e-22	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	995, 1154
AccB1I	GGYRCC	1 cut(s)	1352
AccI	GTMKAC	4 cut(s)	522, 1025, 1281, 1458
AccII	CGCG	1 cut(s)	122
AciI	CCGC	8 cut(s)	91, 122, 268, 432, 505, 951, 980, 1224
AclI	AACGTT	1 cut(s)	459
AclWI	GGATC	4 cut(s)	332, 704, 1793, 1997
AcoI	YGGCCR	2 cut(s)	1273, 1793
AcsI	RAATTY	3 cut(s)	47, 239, 1745
AcyI	GRCGYC	3 cut(s)	992, 1151, 1353
AdeI	CACNNNGTG	1 cut(s)	1585
AfaI	GTAC	4 cut(s)	41, 205, 503, 635
AgsI	TTSAA	8 cut(s)	190, 422, 904, 922, 1826, 1838, 1877, 1889
AjnI	CCWGG	5 cut(s)	73, 297, 509, 692, 726
AleI	CACNNNNGTG	1 cut(s)	1313
AluBI	AGCT	8 cut(s)	29, 110, 135, 681, 967, 1002, 1616, 1652
AluI	AGCT	8 cut(s)	29, 110, 135, 681, 967, 1002, 1616, 1652
Alw26I	GTCTC	1 cut(s)	218
AlwI	GGATC	4 cut(s)	332, 704, 1793, 1997
Ama87I	CYCGRG	2 cut(s)	962, 1085
AoxI	GGCC	8 cut(s)	76, 643, 953, 1062, 1273, 1305, 1610, 1793
ApaI	GGGCCC	1 cut(s)	957
ApeKI	GCWGC	3 cut(s)	365, 468, 1556
ApoI	RAATTY	3 cut(s)	47, 239, 1745
ArsI	GACNNNNNNTTYG	4 cut(s)	977, 1007, 1009, 1039
AspLEI	GCGC	3 cut(s)	622, 1355, 1398
AspS9I	GGNCC	6 cut(s)	643, 953, 954, 1305, 1479, 1503
AsuC2I	CCSGG	1 cut(s)	1978
AsuHPI	GGTGA	7 cut(s)	13, 682, 742, 1000, 1164, 1454, 1730
AsuNHI	GCTAGC	1 cut(s)	1648
AvaI	CYCGRG	2 cut(s)	962, 1085
AvaII	GGWCC	2 cut(s)	1479, 1503
BaeGI	GKGCMC	1 cut(s)	957
BalI	TGGCCA	1 cut(s)	1275
BanI	GGYRCC	1 cut(s)	1352
BanII	GRGCYC	1 cut(s)	957
BauI	CACGAG	1 cut(s)	1358
BbsI	GAAGAC	1 cut(s)	495
BbvI	GCAGC	3 cut(s)	377, 480, 1568
BccI	CCATC	7 cut(s)	371, 677, 965, 1189, 1650, 1763, 1970
BceAI	ACGGC	4 cut(s)	955, 1179, 1550, 1780
BcgI	CGANNNNNNTGC	2 cut(s)	1015, 1049
BciT130I	CCWGG	5 cut(s)	75, 299, 511, 694, 728
BciVI	GTATCC	2 cut(s)	299, 1283
BclI	TGATCA	4 cut(s)	1489, 1690, 1867, 1905
BcnI	CCSGG	1 cut(s)	1978
BcoDI	GTCTC	1 cut(s)	218
BfaI	CTAG	5 cut(s)	384, 1005, 1649, 1926, 1932
BfmI	CTRYAG	3 cut(s)	705, 747, 1953
BfoI	RGCGCY	1 cut(s)	1356
BfuI	GTATCC	2 cut(s)	299, 1283
BisI	GCNGC	4 cut(s)	366, 469, 1224, 1557
BlsI	GCNGC	4 cut(s)	367, 470, 1225, 1558
Bme1390I	CCNGG	6 cut(s)	75, 299, 511, 694, 728, 1978
Bme18I	GGWCC	2 cut(s)	1479, 1503
BmeT110I	CYCGRG	2 cut(s)	962, 1085
BmgT120I	GGNCC	6 cut(s)	643, 953, 954, 1305, 1479, 1503
BmiI	GGNNCC	7 cut(s)	817, 955, 1306, 1354, 1480, 1481, 1512
BmrFI	CCNGG	6 cut(s)	75, 299, 511, 694, 728, 1978
BmrI	ACTGGG	1 cut(s)	467
BmsI	GCATC	4 cut(s)	408, 792, 883, 1724
BmtI	GCTAGC	1 cut(s)	1652
BmuI	ACTGGG	1 cut(s)	467
BpiI	GAAGAC	1 cut(s)	495
BpmI	CTGGAG	2 cut(s)	458, 1117
BpuEI	CTTGAG	1 cut(s)	164
BpuMI	CCSGG	1 cut(s)	1978
Bsa29I	ATCGAT	1 cut(s)	2001
BsaBI	GATNNNNATC	1 cut(s)	329
BsaHI	GRCGYC	3 cut(s)	992, 1151, 1353
BsaJI	CCNNGG	6 cut(s)	298, 370, 693, 1084, 1506, 1523
BsaWI	WCCGGW	1 cut(s)	1500
BsaXI	ACNNNNNCTCC	4 cut(s)	274, 304, 1101, 1131
Bse118I	RCCGGY	3 cut(s)	161, 494, 1049
Bse1I	ACTGG	6 cut(s)	65, 441, 473, 518, 1212, 2006
Bse3DI	GCAATG	2 cut(s)	561, 1727
Bse8I	GATNNNNATC	1 cut(s)	329
BseBI	CCWGG	5 cut(s)	75, 299, 511, 694, 728
BseCI	ATCGAT	1 cut(s)	2001
BseDI	CCNNGG	6 cut(s)	298, 370, 693, 1084, 1506, 1523
BseGI	GGATG	6 cut(s)	87, 957, 1149, 1661, 1780, 1962
BseJI	GATNNNNATC	1 cut(s)	329
BseMI	GCAATG	2 cut(s)	561, 1727
BseMII	CTCAG	2 cut(s)	213, 1498
BseNI	ACTGG	6 cut(s)	65, 441, 473, 518, 1212, 2006
BseRI	GAGGAG	1 cut(s)	576
BseSI	GKGCMC	1 cut(s)	957
BseX3I	CGGCCG	1 cut(s)	1793
BseXI	GCAGC	3 cut(s)	377, 480, 1568
BseYI	CCCAGC	2 cut(s)	106, 293
BsgI	GTGCAG	1 cut(s)	1575
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	1 cut(s)	1796
BshFI	GGCC	8 cut(s)	78, 645, 955, 1064, 1275, 1307, 1612, 1795
BshNI	GGYRCC	1 cut(s)	1352
BshVI	ATCGAT	1 cut(s)	2001
BsiEI	CGRYCG	1 cut(s)	1796
BsiHKCI	CYCGRG	2 cut(s)	962, 1085
BsiSI	CCGG	6 cut(s)	162, 495, 646, 1050, 1501, 1977
BslFI	GGGAC	3 cut(s)	800, 1492, 1993
BsmAI	GTCTC	1 cut(s)	218
BsmFI	GGGAC	3 cut(s)	800, 1492, 1993
BsnI	GGCC	8 cut(s)	78, 645, 955, 1064, 1275, 1307, 1612, 1795
BsoBI	CYCGRG	2 cut(s)	962, 1085
Bsp120I	GGGCCC	1 cut(s)	953
Bsp1286I	GDGCHC	1 cut(s)	957
BspACI	CCGC	8 cut(s)	91, 122, 268, 432, 505, 951, 980, 1224
BspANI	GGCC	8 cut(s)	78, 645, 955, 1064, 1275, 1307, 1612, 1795
BspCNI	CTCAG	2 cut(s)	214, 1497
BspDI	ATCGAT	1 cut(s)	2001
BspFNI	CGCG	1 cut(s)	122
BspHI	TCATGA	2 cut(s)	1365, 1675
BspLI	GGNNCC	7 cut(s)	817, 955, 1306, 1354, 1480, 1481, 1512
BspOI	GCTAGC	1 cut(s)	1652
BspPI	GGATC	4 cut(s)	332, 704, 1793, 1997
BspT107I	GGYRCC	1 cut(s)	1352
BsrDI	GCAATG	2 cut(s)	561, 1727
BsrFI	RCCGGY	3 cut(s)	161, 494, 1049
BsrI	ACTGG	6 cut(s)	65, 441, 473, 518, 1212, 2006
BssAI	RCCGGY	3 cut(s)	161, 494, 1049
BssECI	CCNNGG	6 cut(s)	298, 370, 693, 1084, 1506, 1523
BssNI	GRCGYC	3 cut(s)	992, 1151, 1353
BssSI	CACGAG	1 cut(s)	1358
BssT1I	CCWWGG	3 cut(s)	370, 1506, 1523
Bst2BI	CACGAG	1 cut(s)	1358
Bst2UI	CCWGG	5 cut(s)	75, 299, 511, 694, 728
Bst4CI	ACNGT	2 cut(s)	1403, 1585
Bst6I	CTCTTC	1 cut(s)	621
BstACI	GRCGYC	3 cut(s)	992, 1151, 1353
BstC8I	GCNNGC	5 cut(s)	953, 1038, 1614, 1650, 1739
BstDEI	CTNAG	6 cut(s)	222, 233, 535, 1166, 1453, 1484
BstF5I	GGATG	6 cut(s)	87, 957, 1149, 1661, 1780, 1962
BstFNI	CGCG	1 cut(s)	122
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	3 cut(s)	622, 1355, 1398
BstMAI	GTCTC	1 cut(s)	218
BstMCI	CGRYCG	1 cut(s)	1796
BstMWI	GCNNNNNNNGC	7 cut(s)	265, 405, 504, 857, 948, 1046, 1738
BstNI	CCWGG	5 cut(s)	75, 299, 511, 694, 728
BstNSI	RCATGY	1 cut(s)	502
BstSCI	CCNGG	6 cut(s)	73, 297, 509, 692, 726, 1976
BstSFI	CTRYAG	3 cut(s)	705, 747, 1953
BstSLI	GKGCMC	1 cut(s)	957
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	3 cut(s)	377, 480, 1568
BstV2I	GAAGAC	1 cut(s)	495
BstX2I	RGATCY	1 cut(s)	709
BstXI	CCANNNNNNTGG	2 cut(s)	377, 1315
BstYI	RGATCY	1 cut(s)	709
BstZI	CGGCCG	1 cut(s)	1793
Bsu15I	ATCGAT	1 cut(s)	2001
BsuI	GTATCC	2 cut(s)	299, 1283
BsuRI	GGCC	8 cut(s)	78, 645, 955, 1064, 1275, 1307, 1612, 1795
BsuTUI	ATCGAT	1 cut(s)	2001
BtgZI	GCGATG	4 cut(s)	390, 1329, 1741, 1747
BtsCI	GGATG	6 cut(s)	87, 957, 1149, 1661, 1780, 1962
BtsI	GCAGTG	2 cut(s)	615, 1951
BtsIMutI	CAGTG	7 cut(s)	434, 615, 1205, 1399, 1492, 1590, 1951
Cac8I	GCNNGC	5 cut(s)	953, 1038, 1614, 1650, 1739
CciI	TCATGA	2 cut(s)	1365, 1675
CfoI	GCGC	3 cut(s)	622, 1355, 1398
Cfr10I	RCCGGY	3 cut(s)	161, 494, 1049
Cfr13I	GGNCC	6 cut(s)	643, 953, 954, 1305, 1479, 1503
ClaI	ATCGAT	1 cut(s)	2001
CsiI	ACCWGGT	1 cut(s)	726
Csp6I	GTAC	4 cut(s)	40, 204, 502, 634
CspCI	CAANNNNNGTGG	4 cut(s)	145, 180, 445, 480
CviQI	GTAC	4 cut(s)	40, 204, 502, 634
DdeI	CTNAG	6 cut(s)	222, 233, 535, 1166, 1453, 1484
DinI	GGCGCC	1 cut(s)	1354
DraIII	CACNNNGTG	1 cut(s)	1585
EaeI	YGGCCR	2 cut(s)	1273, 1793
EagI	CGGCCG	1 cut(s)	1793
Eam1104I	CTCTTC	1 cut(s)	621
EarI	CTCTTC	1 cut(s)	621
EclXI	CGGCCG	1 cut(s)	1793
Eco130I	CCWWGG	3 cut(s)	370, 1506, 1523
Eco24I	GRGCYC	1 cut(s)	957
Eco47I	GGWCC	2 cut(s)	1479, 1503
Eco52I	CGGCCG	1 cut(s)	1793
Eco88I	CYCGRG	2 cut(s)	962, 1085
EcoO109I	RGGNCCY	1 cut(s)	1479
EcoRI	GAATTC	2 cut(s)	47, 239
EcoRII	CCWGG	5 cut(s)	73, 297, 509, 692, 726
EcoT14I	CCWWGG	3 cut(s)	370, 1506, 1523
EcoT38I	GRGCYC	1 cut(s)	957
EgeI	GGCGCC	1 cut(s)	1354
EheI	GGCGCC	1 cut(s)	1354
ErhI	CCWWGG	3 cut(s)	370, 1506, 1523
FalI	AAGNNNNNCTT	2 cut(s)	1671, 1703
FaqI	GGGAC	3 cut(s)	800, 1492, 1993
FauI	CCCGC	2 cut(s)	944, 987
FbaI	TGATCA	4 cut(s)	1489, 1690, 1867, 1905
FblI	GTMKAC	4 cut(s)	522, 1025, 1281, 1458
Fnu4HI	GCNGC	4 cut(s)	366, 469, 1224, 1557
FokI	GGATG	6 cut(s)	74, 944, 1156, 1668, 1787, 1949
FriOI	GRGCYC	1 cut(s)	957
Fsp4HI	GCNGC	4 cut(s)	366, 469, 1224, 1557
FspBI	CTAG	5 cut(s)	384, 1005, 1649, 1926, 1932
GlaI	GCGC	3 cut(s)	621, 1354, 1397
GluI	GCNGC	4 cut(s)	366, 469, 1224, 1557
GsaI	CCCAGC	2 cut(s)	110, 297
GsuI	CTGGAG	2 cut(s)	458, 1117
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	8 cut(s)	78, 645, 955, 1064, 1275, 1307, 1612, 1795
HapII	CCGG	6 cut(s)	162, 495, 646, 1050, 1501, 1977
HhaI	GCGC	3 cut(s)	622, 1355, 1398
Hin1I	GRCGYC	3 cut(s)	992, 1151, 1353
Hin6I	GCGC	3 cut(s)	620, 1353, 1396
HinP1I	GCGC	3 cut(s)	620, 1353, 1396
HincII	GTYRAC	5 cut(s)	523, 1026, 1155, 1702, 1974
HindII	GTYRAC	5 cut(s)	523, 1026, 1155, 1702, 1974
HpaII	CCGG	6 cut(s)	162, 495, 646, 1050, 1501, 1977
HphI	GGTGA	7 cut(s)	13, 682, 742, 1000, 1164, 1454, 1730
Hpy166II	GTNNAC	8 cut(s)	523, 634, 1026, 1155, 1282, 1459, 1702, 1974
Hpy188I	TCNGA	8 cut(s)	46, 223, 276, 452, 483, 764, 997, 1993
Hpy8I	GTNNAC	8 cut(s)	523, 634, 1026, 1155, 1282, 1459, 1702, 1974
Hpy99I	CGWCG	3 cut(s)	527, 997, 1153
HpyAV	CCTTC	6 cut(s)	1090, 1586, 1673, 1709, 1876, 1913
HpyCH4III	ACNGT	2 cut(s)	1403, 1585
HpyCH4IV	ACGT	3 cut(s)	459, 992, 1151
HpyF10VI	GCNNNNNNNGC	7 cut(s)	265, 405, 504, 857, 948, 1046, 1738
HpyF3I	CTNAG	6 cut(s)	222, 233, 535, 1166, 1453, 1484
HpySE526I	ACGT	3 cut(s)	459, 992, 1151
Hsp92I	GRCGYC	3 cut(s)	992, 1151, 1353
HspAI	GCGC	3 cut(s)	620, 1353, 1396
KasI	GGCGCC	1 cut(s)	1352
KflI	GGGWCCC	1 cut(s)	1479
Ksp22I	TGATCA	4 cut(s)	1489, 1690, 1867, 1905
LmnI	GCTCC	1 cut(s)	558
Lsp1109I	GCAGC	3 cut(s)	377, 480, 1568
LweI	GCATC	4 cut(s)	408, 792, 883, 1724
MabI	ACCWGGT	1 cut(s)	726
MaeI	CTAG	5 cut(s)	384, 1005, 1649, 1926, 1932
MaeII	ACGT	3 cut(s)	459, 992, 1151
MaeIII	GTNAC	4 cut(s)	730, 988, 1196, 1618
MflI	RGATCY	1 cut(s)	709
MhlI	GDGCHC	1 cut(s)	957
MlsI	TGGCCA	1 cut(s)	1275
MluCI	AATT	9 cut(s)	47, 239, 553, 592, 1708, 1722, 1745, 1826, 1858
MluNI	TGGCCA	1 cut(s)	1275
Mly113I	GGCGCC	1 cut(s)	1353
MlyI	GAGTC	2 cut(s)	280, 1021
MmeI	TCCRAC	2 cut(s)	975, 1152
Mox20I	TGGCCA	1 cut(s)	1275
MscI	TGGCCA	1 cut(s)	1275
MseI	TTAA	3 cut(s)	318, 837, 1250
MslI	CAYNNNNRTG	4 cut(s)	338, 497, 1313, 1732
Msp20I	TGGCCA	1 cut(s)	1275
MspA1I	CMGCKG	2 cut(s)	268, 1616
MspI	CCGG	6 cut(s)	162, 495, 646, 1050, 1501, 1977
MspR9I	CCNGG	6 cut(s)	75, 299, 511, 694, 728, 1978
MvaI	CCWGG	5 cut(s)	75, 299, 511, 694, 728
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	7 cut(s)	265, 405, 504, 857, 948, 1046, 1738
NarI	GGCGCC	1 cut(s)	1353
NciI	CCSGG	1 cut(s)	1978
NheI	GCTAGC	1 cut(s)	1648
NlaIV	GGNNCC	7 cut(s)	817, 955, 1306, 1354, 1480, 1481, 1512
NmeAIII	GCCGAG	3 cut(s)	10, 341, 927
NmuCI	GTSAC	4 cut(s)	730, 988, 1196, 1618
NspI	RCATGY	1 cut(s)	502
OliI	CACNNNNGTG	1 cut(s)	1313
PagI	TCATGA	2 cut(s)	1365, 1675
PcsI	WCGNNNNNNNCGW	1 cut(s)	126
PfeI	GAWTC	8 cut(s)	453, 514, 699, 759, 772, 808, 1124, 1958
PflFI	GACNNNGTC	1 cut(s)	1150
PkrI	GCNGC	4 cut(s)	367, 470, 1225, 1558
PleI	GAGTC	2 cut(s)	279, 1021
PluTI	GGCGCC	1 cut(s)	1356
PpsI	GAGTC	2 cut(s)	279, 1021
PpuMI	RGGWCCY	1 cut(s)	1479
Psp1406I	AACGTT	1 cut(s)	459
Psp5II	RGGWCCY	1 cut(s)	1479
Psp6I	CCWGG	5 cut(s)	73, 297, 509, 692, 726
PspFI	CCCAGC	2 cut(s)	106, 293
PspGI	CCWGG	5 cut(s)	73, 297, 509, 692, 726
PspN4I	GGNNCC	7 cut(s)	817, 955, 1306, 1354, 1480, 1481, 1512
PspOMI	GGGCCC	1 cut(s)	953
PspPI	GGNCC	6 cut(s)	643, 953, 954, 1305, 1479, 1503
PspPPI	RGGWCCY	1 cut(s)	1479
PsuI	RGATCY	1 cut(s)	709
PsyI	GACNNNGTC	1 cut(s)	1150
PvuII	CAGCTG	1 cut(s)	1616
RsaI	GTAC	4 cut(s)	41, 205, 503, 635
RsaNI	GTAC	4 cut(s)	40, 204, 502, 634
RseI	CAYNNNNRTG	4 cut(s)	338, 497, 1313, 1732
SalI	GTCGAC	2 cut(s)	521, 1024
SaqAI	TTAA	3 cut(s)	318, 837, 1250
SatI	GCNGC	4 cut(s)	366, 469, 1224, 1557
Sau96I	GGNCC	6 cut(s)	643, 953, 954, 1305, 1479, 1503
SchI	GAGTC	2 cut(s)	280, 1021
ScrFI	CCNGG	6 cut(s)	75, 299, 511, 694, 728, 1978
SduI	GDGCHC	1 cut(s)	957
SexAI	ACCWGGT	1 cut(s)	726
SfaNI	GCATC	4 cut(s)	408, 792, 883, 1724
SfcI	CTRYAG	3 cut(s)	705, 747, 1953
SfoI	GGCGCC	1 cut(s)	1354
SgrAI	CRCCGGYG	1 cut(s)	1049
SinI	GGWCC	2 cut(s)	1479, 1503
SmiMI	CAYNNNNRTG	4 cut(s)	338, 497, 1313, 1732
SmlI	CTYRAG	1 cut(s)	179
SmoI	CTYRAG	1 cut(s)	179
Sse9I	AATT	9 cut(s)	47, 239, 553, 592, 1708, 1722, 1745, 1826, 1858
SsiI	CCGC	8 cut(s)	91, 122, 268, 432, 505, 951, 980, 1224
SspDI	GGCGCC	1 cut(s)	1352
SspMI	CTAG	5 cut(s)	384, 1005, 1649, 1926, 1932
StyD4I	CCNGG	6 cut(s)	73, 297, 509, 692, 726, 1976
StyI	CCWWGG	3 cut(s)	370, 1506, 1523
TaaI	ACNGT	2 cut(s)	1403, 1585
TaiI	ACGT	3 cut(s)	462, 995, 1154
TasI	AATT	9 cut(s)	47, 239, 553, 592, 1708, 1722, 1745, 1826, 1858
TauI	GCSGC	1 cut(s)	1226
TfiI	GAWTC	8 cut(s)	453, 514, 699, 759, 772, 808, 1124, 1958
Tru1I	TTAA	3 cut(s)	318, 837, 1250
Tru9I	TTAA	3 cut(s)	318, 837, 1250
TscAI	CASTG	7 cut(s)	441, 622, 1212, 1406, 1492, 1590, 1951
TseFI	GTSAC	4 cut(s)	730, 988, 1196, 1618
TseI	GCWGC	3 cut(s)	365, 468, 1556
Tsp45I	GTSAC	4 cut(s)	730, 988, 1196, 1618
TspDTI	ATGAA	6 cut(s)	76, 501, 1332, 1354, 1692, 1932
TspGWI	ACGGA	1 cut(s)	1385
TspRI	CASTG	7 cut(s)	441, 622, 1212, 1406, 1492, 1590, 1951
Tth111I	GACNNNGTC	1 cut(s)	1150
VpaK11BI	GGWCC	2 cut(s)	1479, 1503
XapI	RAATTY	3 cut(s)	47, 239, 1745
XbaI	TCTAGA	2 cut(s)	1004, 1931
XceI	RCATGY	1 cut(s)	502
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1521
XmiI	GTMKAC	4 cut(s)	522, 1025, 1281, 1458
XspI	CTAG	5 cut(s)	384, 1005, 1649, 1926, 1932
ZraI	GACGTC	2 cut(s)	993, 1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.