Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

24158262 .. 24161103

Gene Structure 2842 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G251700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2649 bp

ATGAAGAAACTCCTTCTCCCTCCTCTGCCTCTTTACTTCCTTCCCCTGTTTCTTCAAATTGCCACCCTACTCTCTGCACCTATCTACACTCCGGTGGAAGACATCACCATCAACTGCGGCTCTTCCGGAACATCATTAAACATGGATGACAACCGGAATTGGACTGGAGATATCAACTCAAAACTCTCCCCCTCTGAGTTTAACCAAGCTAACACCAACACCTCCTCCCAAGTCAGAGAAGCACCCCCCTCCTCCTCTGTTAACCAAATCCAAGTGCCTTACACCACCGCTCGTCTTTCTCGCTCCGAATTTACTTACAAAGTTCCCCTCTCCACCGGGCAGAAGTTTATTCGCTTCTACTTCCGCCCAGTTTCATATGGCCCCGACTTTGACAGGTCCAAAGCCCTCTTCTCTGTCCAAGCAGGTGGCTTTACCCTTCTCCATGATTTCAATGCTTCTGTAACTGCTGATGCTGGTGAGACTGAGAAGCTAATAAGAGAGTTCTGTTTGAACATTGATGAAGAACAGAGCTTGGCCATCATGTTCACTCCGAGCAGAGCAATCCCAGATGCTTATGCCTTTATCAATGGGATTGAGATTGTGTCCATGCCTACCAATCTTTACTACACTTCTCCTGAAAACCCAGATGGTGCCCATTTTGTAGGCAACAATATCAAGTATCCTATTGAAAACAGCACGGCGATGGAGACGGTGTACCGAATAAACGTCGGCGGAAGCGGACTCTCATTCGACCAAGACACTGGGATGTACCGCAATTGGGAGAATGTGGTATACGAGCAAAAGTACTTGGATGATTTGAGTTCCAGGTGGACTGTTCTTCCACAAAACGTTAGCCTTCAACTCAACTTTGTGAAAATACCAAAGTACTCTGCTCCAGAAACAGTTTACCAAACTGGCCGGTCCATGGGCAAGAACCACACCCAAAACAAGAGCTACAACCTCACCTGGGAATTTCCCGTAGATCCCAAGTTTCTTTACCTGCTAAGGCTACATTTCTGTGAGTTTGAGCCTGAAATTATGGACACTGGGGACCGATCGTTTCTAATCTATGTGGACAACCAACTTGCTGAGCCACAAGCTGACATAATCATGTGGAGTGGTGGAAATGGGAGACCAATCTACAGGGACTACGTTGTGTTCATGCCGGCAGGCCCTGATCATAAGAAAGTTAAGCTCTTTCTTGCACTGCAAGCAAACCCAATAAATTGGATGACTAAATACAATGATGTACTCTTGAACGGCCTTGAACTCTTCAAACTCAACGATACAAATGGAAATCTCGCAGGACCAAATCCCGACCCACCTCCACCAAAGGAGATGCAGCCGAAAACCCCCTCAAAACAGTCGAAGAAGAAGTCAACTCCTATGATTCCCATCGTTGCTGGTGCAGTTTCCGCCATACTTGTATTACTCTCTGTCCTTGGATTCTTGGTTTTCAGTCGAAGAAGAAGAGACAAGGATACCGATGATGACCCATTTGTACCTTCCGGTTTGTGTCGTGAGTTTTCATTGTCTGAGATCAAAGCCGCCACCAGAAACTTCAACGAGGGTTCTATTATCGGTGTTGGTGGGTTCGGCCATGTGTACAAAGGGAGCATCGATCAGGGCACCGTTGTTGCAATCAAACGGCTTAAACCCGAGTCGCAACAAGGGGTCCCAGAGTTTAGGGCGGAGATCGATATGCTCTCCCAACTCCGCCACCAACATTTGGTGTCTCTCATCGGGTACTGTAAAGATAGAAGGGAAATGATCTTGGTGTATGAGTACATGGAAAATAAGACTCTTTATGATCATCTAATGAAGCCAAAATCCGATCCTAATGCACAACCACTTCCTTGGGGAAAACGGCTCCAGATTTGTATTGGCGCAGCGCGTGGTTTGCACTACCTTCACACTGGTGGTACGGAAGGCACCATCATTCACCGTGATGTAAAAAGCACAAACATTTTATTGGACGAGAAATGGGTGGCCAAAGTTTCGGATTTCGGGTTGTCGAAAATGAGCTCGATGACCATGTCCAAAACCCACATTACCACGGCAGTGAAGGGTAGTTATGGGTATTTGGACCCAGAATACATGCTCCGAAATCAATTGACCGAGAAGTCGGATGTGTACTCATTCGGCGTCGTGTTGTGTGAGGTGCTGTGTGCAAGGCCAGCCTTGATGCGTACAGTGGAGAAGAAGGAAATGAGTTTGGCTATGTGGTTCAAGGCCTGCCATCAGAATGGGGAACTTGATCAAATCATCGATCCAAGCTTGAAGGGTAAAATTGAAGACGAGTGCTTCAAAGTGTTCGTTGAGATTGCGCTGAGTTGTATGCATGAGAATGGGAAACAACGTCCGTCGATGAACAACGTGGTGGAGGGGCTTGTGCAAGCATTAAAACTTCAGCAGAACGGAGATAAGATGGACGAGGATGACGAAACCAAGGGTGAAACAAAGGAGACTGCAATTATGAATGAGAGCGATGGAGGTTTTAGTTCCAGCTGGACAGAGTCATCTGATTCGAAGAACAGTAGTAGGGTCACCAACACCAGTAGTGATCAAAGTTGTTCGACCACCAACAATTCCATTAAAGGAATGTCCGGGACAGTTTTTTCTGAGATCAAAGATCCCAGTGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

883

Amino Acids

98.85

Weight (kDa)

5.94

Isoelectric Point (pI)

42.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	413
AasI	GACNNNNNNGTC	1 cut(s)	2122
Acc36I	ACCTGC	2 cut(s)	413, 1008
AccB1I	GGYRCC	3 cut(s)	650, 1628, 1931
AccB7I	CCANNNNNTGG	1 cut(s)	1729
AccBSI	CCGCTC	1 cut(s)	290
AccI	GTMKAC	1 cut(s)	792
AccII	CGCG	1 cut(s)	1894
AccIII	TCCGGA	1 cut(s)	125
AclI	AACGTT	1 cut(s)	849
AclWI	GGATC	4 cut(s)	977, 1829, 2264, 2627
AcoI	YGGCCR	4 cut(s)	534, 916, 1597, 1989
AcsI	RAATTY	2 cut(s)	308, 971
AcuI	CTGAAG	1 cut(s)	2393
AcyI	GRCGYC	1 cut(s)	2145
AfiI	CCNNNNNNNGG	4 cut(s)	778, 925, 967, 1729
AjnI	CCWGG	2 cut(s)	824, 965
AjuI	GAANNNNNNNTTGG	2 cut(s)	392, 424
AleI	CACNNNNGTG	3 cut(s)	92, 1917, 2060
AluBI	AGCT	9 cut(s)	209, 490, 531, 954, 1100, 1195, 2025, 2277, 2508
AluI	AGCT	9 cut(s)	209, 490, 531, 954, 1100, 1195, 2025, 2277, 2508
Alw21I	GWGCWC	1 cut(s)	2027
Alw26I	GTCTC	6 cut(s)	473, 701, 1126, 1467, 1740, 2459
AlwI	GGATC	4 cut(s)	977, 1829, 2264, 2627
AlwNI	CAGNNNCTG	1 cut(s)	1175
Ama87I	CYCGRG	1 cut(s)	1658
Aor13HI	TCCGGA	1 cut(s)	125
AoxI	GGCC	9 cut(s)	379, 534, 916, 1171, 1261, 1597, 1989, 2174, 2232
ApeKI	GCWGC	2 cut(s)	1342, 1889
ApoI	RAATTY	2 cut(s)	308, 971
ArsI	GACNNNNNNTTYG	2 cut(s)	1361, 1393
AspLEI	GCGC	3 cut(s)	1889, 1894, 2329
AspS9I	GGNCC	8 cut(s)	380, 396, 921, 1051, 1172, 1307, 1675, 2086
AsuC2I	CCSGG	2 cut(s)	337, 2608
AsuHPI	GGTGA	6 cut(s)	97, 488, 955, 1934, 2465, 2539
AsuII	TTCGAA	1 cut(s)	2528
AvaI	CYCGRG	1 cut(s)	1658
AvaII	GGWCC	6 cut(s)	396, 921, 1051, 1307, 1675, 2086
BaeGI	GKGCMC	2 cut(s)	655, 1631
BalI	TGGCCA	2 cut(s)	536, 1991
BanI	GGYRCC	3 cut(s)	650, 1628, 1931
BanII	GRGCYC	1 cut(s)	2027
BbsI	GAAGAC	2 cut(s)	105, 2301
Bbv12I	GWGCWC	1 cut(s)	2027
BbvI	GCAGC	2 cut(s)	1354, 1901
BccI	CCATC	9 cut(s)	116, 545, 641, 697, 1403, 1943, 2247, 2422, 2483
BceAI	ACGGC	5 cut(s)	714, 1276, 1664, 1883, 2073
BcgI	CGANNNNNNTGC	2 cut(s)	1823, 1857
BciT130I	CCWGG	2 cut(s)	826, 967
BciVI	GTATCC	2 cut(s)	690, 1474
BclI	TGATCA	4 cut(s)	1177, 1810, 2257, 2563
BcnI	CCSGG	2 cut(s)	337, 2608
BcoDI	GTCTC	6 cut(s)	473, 701, 1126, 1467, 1740, 2459
BfmI	CTRYAG	1 cut(s)	1141
BfuAI	ACCTGC	2 cut(s)	413, 1008
BfuI	GTATCC	2 cut(s)	690, 1474
BisI	GCNGC	4 cut(s)	118, 1343, 1548, 1890
BlpI	GCTNAGC	1 cut(s)	1089
BlsI	GCNGC	4 cut(s)	119, 1344, 1549, 1891
BmcAI	AGTACT	2 cut(s)	806, 887
Bme1390I	CCNGG	4 cut(s)	337, 826, 967, 2608
Bme18I	GGWCC	6 cut(s)	396, 921, 1051, 1307, 1675, 2086
BmeT110I	CYCGRG	1 cut(s)	1658
BmgT120I	GGNCC	8 cut(s)	380, 396, 921, 1051, 1172, 1307, 1675, 2086
BmiI	GGNNCC	9 cut(s)	382, 652, 1052, 1630, 1676, 1677, 1871, 1933, 2088
BmrFI	CCNGG	4 cut(s)	337, 826, 967, 2608
BmrI	ACTGGG	4 cut(s)	362, 771, 1056, 2631
BmsI	GCATC	5 cut(s)	460, 559, 1329, 1626, 2175
BmuI	ACTGGG	4 cut(s)	362, 771, 1056, 2631
BpiI	GAAGAC	2 cut(s)	105, 2301
BpmI	CTGGAG	3 cut(s)	186, 879, 1856
Bpu10I	CCTNAGC	1 cut(s)	1004
Bpu1102I	GCTNAGC	1 cut(s)	1089
Bpu14I	TTCGAA	1 cut(s)	2528
BpuMI	CCSGG	2 cut(s)	337, 2608
Bsa29I	ATCGAT	3 cut(s)	1620, 1698, 2268
BsaBI	GATNNNNATC	1 cut(s)	1394
BsaHI	GRCGYC	1 cut(s)	2145
BsaI	GGTCTC	1 cut(s)	1126
BsaJI	CCNNGG	6 cut(s)	924, 966, 1441, 1856, 2055, 2448
BsaWI	WCCGGW	4 cut(s)	91, 125, 153, 1508
BsaXI	ACNNNNNCTCC	5 cut(s)	30, 209, 239, 698, 728
Bsc4I	CCNNNNNNNGG	4 cut(s)	778, 925, 967, 1729
Bse118I	RCCGGY	2 cut(s)	918, 1165
Bse1I	ACTGG	8 cut(s)	169, 368, 766, 919, 1051, 1921, 2556, 2637
Bse8I	GATNNNNATC	1 cut(s)	1394
BseAI	TCCGGA	1 cut(s)	125
BseBI	CCWGG	2 cut(s)	826, 967
BseCI	ATCGAT	3 cut(s)	1620, 1698, 2268
BseDI	CCNNGG	6 cut(s)	924, 966, 1441, 1856, 2055, 2448
BseGI	GGATG	6 cut(s)	151, 771, 817, 1236, 2134, 2443
BseJI	GATNNNNATC	1 cut(s)	1394
BseLI	CCNNNNNNNGG	4 cut(s)	778, 925, 967, 1729
BseMII	CTCAG	6 cut(s)	186, 474, 1080, 1527, 2321, 2613
BseNI	ACTGG	8 cut(s)	169, 368, 766, 919, 1051, 1921, 2556, 2637
BseRI	GAGGAG	4 cut(s)	12, 214, 241, 244
BseSI	GKGCMC	2 cut(s)	655, 1631
BseXI	GCAGC	2 cut(s)	1354, 1901
BsgI	GTGCAG	2 cut(s)	60, 1428
Bsh1236I	CGCG	1 cut(s)	1894
Bsh1285I	CGRYCG	1 cut(s)	1058
BshFI	GGCC	9 cut(s)	381, 536, 918, 1173, 1263, 1599, 1991, 2176, 2234
BshNI	GGYRCC	3 cut(s)	650, 1628, 1931
BshVI	ATCGAT	3 cut(s)	1620, 1698, 2268
BsiEI	CGRYCG	1 cut(s)	1058
BsiHKAI	GWGCWC	1 cut(s)	2027
BsiHKCI	CYCGRG	1 cut(s)	1658
BsiSI	CCGG	8 cut(s)	92, 126, 154, 336, 919, 1166, 1509, 2607
BslFI	GGGAC	4 cut(s)	1064, 1160, 1661, 2623
BslI	CCNNNNNNNGG	4 cut(s)	778, 925, 967, 1729
BsmAI	GTCTC	6 cut(s)	473, 701, 1126, 1467, 1740, 2459
BsmBI	CGTCTC	1 cut(s)	701
BsmFI	GGGAC	4 cut(s)	1064, 1160, 1661, 2623
BsnI	GGCC	9 cut(s)	381, 536, 918, 1173, 1263, 1599, 1991, 2176, 2234
Bso31I	GGTCTC	1 cut(s)	1126
BsoBI	CYCGRG	1 cut(s)	1658
Bsp119I	TTCGAA	1 cut(s)	2528
Bsp1286I	GDGCHC	3 cut(s)	655, 1631, 2027
Bsp13I	TCCGGA	1 cut(s)	125
Bsp1407I	TGTACA	1 cut(s)	1605
Bsp1720I	GCTNAGC	1 cut(s)	1089
Bsp19I	CCATGG	1 cut(s)	924
BspANI	GGCC	9 cut(s)	381, 536, 918, 1173, 1263, 1599, 1991, 2176, 2234
BspCNI	CTCAG	6 cut(s)	187, 475, 1081, 1528, 2322, 2614
BspDI	ATCGAT	3 cut(s)	1620, 1698, 2268
BspEI	TCCGGA	1 cut(s)	125
BspFNI	CGCG	1 cut(s)	1894
BspLI	GGNNCC	9 cut(s)	382, 652, 1052, 1630, 1676, 1677, 1871, 1933, 2088
BspMI	ACCTGC	2 cut(s)	413, 1008
BspPI	GGATC	4 cut(s)	977, 1829, 2264, 2627
BspQI	GCTCTTC	1 cut(s)	127
BspT104I	TTCGAA	1 cut(s)	2528
BspT107I	GGYRCC	3 cut(s)	650, 1628, 1931
BspTNI	GGTCTC	1 cut(s)	1126
BsrBI	CCGCTC	1 cut(s)	290
BsrFI	RCCGGY	2 cut(s)	918, 1165
BsrGI	TGTACA	1 cut(s)	1605
BsrI	ACTGG	8 cut(s)	169, 368, 766, 919, 1051, 1921, 2556, 2637
BssAI	RCCGGY	2 cut(s)	918, 1165
BssECI	CCNNGG	6 cut(s)	924, 966, 1441, 1856, 2055, 2448
BssNAI	GTATAC	1 cut(s)	793
BssNI	GRCGYC	1 cut(s)	2145
BssT1I	CCWWGG	4 cut(s)	924, 1441, 1856, 2448
Bst1107I	GTATAC	1 cut(s)	793
Bst2UI	CCWGG	2 cut(s)	826, 967
Bst6I	CTCTTC	4 cut(s)	127, 413, 1277, 1465
BstACI	GRCGYC	1 cut(s)	2145
BstAUI	TGTACA	1 cut(s)	1605
BstBI	TTCGAA	1 cut(s)	2528
BstC8I	GCNNGC	6 cut(s)	1167, 1171, 1212, 2178, 2236, 2397
BstDEI	CTNAG	7 cut(s)	195, 483, 1004, 1089, 1536, 2330, 2622
BstDSI	CCRYGG	2 cut(s)	924, 2055
BstEII	GGTNACC	1 cut(s)	2545
BstF5I	GGATG	6 cut(s)	151, 771, 817, 1236, 2134, 2443
BstFNI	CGCG	1 cut(s)	1894
BstHHI	GCGC	3 cut(s)	1889, 1894, 2329
BstMAI	GTCTC	6 cut(s)	473, 701, 1126, 1467, 1740, 2459
BstMCI	CGRYCG	1 cut(s)	1058
BstMWI	GCNNNNNNNGC	4 cut(s)	1211, 1415, 1900, 2177
BstNI	CCWGG	2 cut(s)	826, 967
BstNSI	RCATGY	1 cut(s)	2101
BstPI	GGTNACC	1 cut(s)	2545
BstSCI	CCNGG	4 cut(s)	335, 824, 965, 2606
BstSFI	CTRYAG	1 cut(s)	1141
BstSLI	GKGCMC	2 cut(s)	655, 1631
BstUI	CGCG	1 cut(s)	1894
BstV1I	GCAGC	2 cut(s)	1354, 1901
BstV2I	GAAGAC	2 cut(s)	105, 2301
BstX2I	RGATCY	2 cut(s)	982, 2632
BstXI	CCANNNNNNTGG	5 cut(s)	425, 761, 1227, 1857, 2246
BstYI	RGATCY	2 cut(s)	982, 2632
BstZ17I	GTATAC	1 cut(s)	793
Bsu15I	ATCGAT	3 cut(s)	1620, 1698, 2268
BsuI	GTATCC	2 cut(s)	690, 1474
BsuRI	GGCC	9 cut(s)	381, 536, 918, 1173, 1263, 1599, 1991, 2176, 2234
BsuTUI	ATCGAT	3 cut(s)	1620, 1698, 2268
BtgI	CCRYGG	2 cut(s)	924, 2055
BtgZI	GCGATG	2 cut(s)	716, 2502
BtsCI	GGATG	6 cut(s)	151, 771, 817, 1236, 2134, 2443
BtsI	GCAGTG	2 cut(s)	1205, 2067
BtsIMutI	CAGTG	7 cut(s)	759, 1044, 1205, 1914, 2067, 2199, 2644
BveI	ACCTGC	2 cut(s)	413, 1008
Cac8I	GCNNGC	6 cut(s)	1167, 1171, 1212, 2178, 2236, 2397
CaiI	CAGNNNCTG	1 cut(s)	1175
CfoI	GCGC	3 cut(s)	1889, 1894, 2329
Cfr10I	RCCGGY	2 cut(s)	918, 1165
Cfr13I	GGNCC	8 cut(s)	380, 396, 921, 1051, 1172, 1307, 1675, 2086
ClaI	ATCGAT	3 cut(s)	1620, 1698, 2268
CseI	GACGC	1 cut(s)	2134
DdeI	CTNAG	7 cut(s)	195, 483, 1004, 1089, 1536, 2330, 2622
DrdI	GACNNNNNNGTC	1 cut(s)	2122
DseDI	GACNNNNNNGTC	1 cut(s)	2122
EaeI	YGGCCR	4 cut(s)	534, 916, 1597, 1989
Eam1104I	CTCTTC	4 cut(s)	127, 413, 1277, 1465
EarI	CTCTTC	4 cut(s)	127, 413, 1277, 1465
EciI	GGCGGA	5 cut(s)	353, 747, 1405, 1706, 1706
Ecl136II	GAGCTC	1 cut(s)	2025
Eco130I	CCWWGG	4 cut(s)	924, 1441, 1856, 2448
Eco147I	AGGCCT	1 cut(s)	2234
Eco24I	GRGCYC	1 cut(s)	2027
Eco31I	GGTCTC	1 cut(s)	1126
Eco32I	GATATC	1 cut(s)	172
Eco47I	GGWCC	6 cut(s)	396, 921, 1051, 1307, 1675, 2086
Eco53kI	GAGCTC	1 cut(s)	2025
Eco57I	CTGAAG	1 cut(s)	2393
Eco88I	CYCGRG	1 cut(s)	1658
Eco91I	GGTNACC	1 cut(s)	2545
EcoICRI	GAGCTC	1 cut(s)	2025
EcoO109I	RGGNCCY	2 cut(s)	1172, 1675
EcoO65I	GGTNACC	1 cut(s)	2545
EcoRII	CCWGG	2 cut(s)	824, 965
EcoRV	GATATC	1 cut(s)	172
EcoT14I	CCWWGG	4 cut(s)	924, 1441, 1856, 2448
EcoT22I	ATGCAT	1 cut(s)	2343
EcoT38I	GRGCYC	1 cut(s)	2027
ErhI	CCWWGG	4 cut(s)	924, 1441, 1856, 2448
Esp3I	CGTCTC	1 cut(s)	701
FaqI	GGGAC	4 cut(s)	1064, 1160, 1661, 2623
FauNDI	CATATG	1 cut(s)	376
FbaI	TGATCA	4 cut(s)	1177, 1810, 2257, 2563
FblI	GTMKAC	1 cut(s)	792
Fnu4HI	GCNGC	4 cut(s)	118, 1343, 1548, 1890
FokI	GGATG	6 cut(s)	158, 778, 824, 1243, 2141, 2450
FriOI	GRGCYC	1 cut(s)	2027
Fsp4HI	GCNGC	4 cut(s)	118, 1343, 1548, 1890
GlaI	GCGC	3 cut(s)	1888, 1893, 2328
GluI	GCNGC	4 cut(s)	118, 1343, 1548, 1890
GsuI	CTGGAG	3 cut(s)	186, 879, 1856
HaeIII	GGCC	9 cut(s)	381, 536, 918, 1173, 1263, 1599, 1991, 2176, 2234
HapII	CCGG	8 cut(s)	92, 126, 154, 336, 919, 1166, 1509, 2607
HgaI	GACGC	1 cut(s)	2134
HhaI	GCGC	3 cut(s)	1889, 1894, 2329
Hin1I	GRCGYC	1 cut(s)	2145
Hin6I	GCGC	3 cut(s)	1887, 1892, 2327
HinP1I	GCGC	3 cut(s)	1887, 1892, 2327
HincII	GTYRAC	2 cut(s)	262, 1380
HindII	GTYRAC	2 cut(s)	262, 1380
HindIII	AAGCTT	1 cut(s)	2275
HinfI	GANTC	7 cut(s)	741, 1390, 1446, 1661, 1801, 2516, 2525
HpaI	GTTAAC	1 cut(s)	262
HpaII	CCGG	8 cut(s)	92, 126, 154, 336, 919, 1166, 1509, 2607
HphI	GGTGA	6 cut(s)	97, 488, 955, 1934, 2465, 2539
Hpy188III	TCNNGA	7 cut(s)	126, 635, 896, 1255, 1316, 1520, 1873
Hpy99I	CGWCG	3 cut(s)	731, 2150, 2368
HpyCH4IV	ACGT	5 cut(s)	726, 849, 1152, 2359, 2376
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1211, 1415, 1900, 2177
HpyF3I	CTNAG	7 cut(s)	195, 483, 1004, 1089, 1536, 2330, 2622
HpySE526I	ACGT	5 cut(s)	726, 849, 1152, 2359, 2376
Hsp92I	GRCGYC	1 cut(s)	2145
HspAI	GCGC	3 cut(s)	1887, 1892, 2327
KflI	GGGWCCC	1 cut(s)	1675
Kpn2I	TCCGGA	1 cut(s)	125
KroI	GCCGGC	1 cut(s)	1165
KroNI	GCCGGC	1 cut(s)	1167
Ksp22I	TGATCA	4 cut(s)	1177, 1810, 2257, 2563
KspAI	GTTAAC	1 cut(s)	262
LguI	GCTCTTC	1 cut(s)	127
LmnI	GCTCC	5 cut(s)	308, 898, 1614, 1875, 2106
Lsp1109I	GCAGC	2 cut(s)	1354, 1901
LweI	GCATC	5 cut(s)	460, 559, 1329, 1626, 2175
MaeII	ACGT	5 cut(s)	726, 849, 1152, 2359, 2376
MaeIII	GTNAC	2 cut(s)	460, 2545
MbiI	CCGCTC	1 cut(s)	290
MfeI	CAATTG	2 cut(s)	775, 2111
MflI	RGATCY	2 cut(s)	982, 2632
MhlI	GDGCHC	3 cut(s)	655, 1631, 2027
MlsI	TGGCCA	2 cut(s)	536, 1991
MluNI	TGGCCA	2 cut(s)	536, 1991
MlyI	GAGTC	4 cut(s)	735, 1670, 1795, 2525
MmeI	TCCRAC	1 cut(s)	2106
Mox20I	TGGCCA	2 cut(s)	536, 1991
Mph1103I	ATGCAT	1 cut(s)	2343
MroI	TCCGGA	1 cut(s)	125
MroNI	GCCGGC	1 cut(s)	1165
MscI	TGGCCA	2 cut(s)	536, 1991
MseI	TTAA	7 cut(s)	137, 201, 261, 1191, 1653, 2402, 2595
Msp20I	TGGCCA	2 cut(s)	536, 1991
MspA1I	CMGCKG	1 cut(s)	2508
MspI	CCGG	8 cut(s)	92, 126, 154, 336, 919, 1166, 1509, 2607
MspR9I	CCNGG	4 cut(s)	337, 826, 967, 2608
MteI	GCGCNGCGC	1 cut(s)	1890
MunI	CAATTG	2 cut(s)	775, 2111
MvaI	CCWGG	2 cut(s)	826, 967
MvnI	CGCG	1 cut(s)	1894
MwoI	GCNNNNNNNGC	4 cut(s)	1211, 1415, 1900, 2177
NaeI	GCCGGC	1 cut(s)	1167
NciI	CCSGG	2 cut(s)	337, 2608
NcoI	CCATGG	1 cut(s)	924
NdeI	CATATG	1 cut(s)	376
NgoMIV	GCCGGC	1 cut(s)	1165
NlaIV	GGNNCC	9 cut(s)	382, 652, 1052, 1630, 1676, 1677, 1871, 1933, 2088
NmuCI	GTSAC	1 cut(s)	2545
NsiI	ATGCAT	1 cut(s)	2343
NspI	RCATGY	1 cut(s)	2101
NspV	TTCGAA	1 cut(s)	2528
OliI	CACNNNNGTG	3 cut(s)	92, 1917, 2060
PaqCI	CACCTGC	1 cut(s)	413
PceI	AGGCCT	1 cut(s)	2234
PciSI	GCTCTTC	1 cut(s)	127
PcsI	WCGNNNNNNNCGW	1 cut(s)	2439
PdiI	GCCGGC	1 cut(s)	1167
PfeI	GAWTC	3 cut(s)	1390, 1446, 2525
PflFI	GACNNNGTC	2 cut(s)	2035, 2515
PflMI	CCANNNNNTGG	1 cut(s)	1729
PfoI	TCCNGGA	1 cut(s)	2606
PkrI	GCNGC	4 cut(s)	119, 1344, 1549, 1891
Ple19I	CGATCG	1 cut(s)	1058
PleI	GAGTC	4 cut(s)	735, 1669, 1795, 2524
PpsI	GAGTC	4 cut(s)	735, 1669, 1795, 2524
PpuMI	RGGWCCY	1 cut(s)	1675
Psp124BI	GAGCTC	1 cut(s)	2027
Psp1406I	AACGTT	1 cut(s)	849
Psp5II	RGGWCCY	1 cut(s)	1675
Psp6I	CCWGG	2 cut(s)	824, 965
PspEI	GGTNACC	1 cut(s)	2545
PspGI	CCWGG	2 cut(s)	824, 965
PspN4I	GGNNCC	9 cut(s)	382, 652, 1052, 1630, 1676, 1677, 1871, 1933, 2088
PspPI	GGNCC	8 cut(s)	380, 396, 921, 1051, 1172, 1307, 1675, 2086
PspPPI	RGGWCCY	1 cut(s)	1675
PstNI	CAGNNNCTG	1 cut(s)	1175
PsuI	RGATCY	2 cut(s)	982, 2632
PsyI	GACNNNGTC	2 cut(s)	2035, 2515
PvuI	CGATCG	1 cut(s)	1058
PvuII	CAGCTG	1 cut(s)	2508
SacI	GAGCTC	1 cut(s)	2027
SapI	GCTCTTC	1 cut(s)	127
SaqAI	TTAA	7 cut(s)	137, 201, 261, 1191, 1653, 2402, 2595
SatI	GCNGC	4 cut(s)	118, 1343, 1548, 1890
Sau96I	GGNCC	8 cut(s)	380, 396, 921, 1051, 1172, 1307, 1675, 2086
ScaI	AGTACT	2 cut(s)	806, 887
SchI	GAGTC	4 cut(s)	735, 1670, 1795, 2525
ScrFI	CCNGG	4 cut(s)	337, 826, 967, 2608
SduI	GDGCHC	3 cut(s)	655, 1631, 2027
SfaNI	GCATC	5 cut(s)	460, 559, 1329, 1626, 2175
SfcI	CTRYAG	1 cut(s)	1141
SfuI	TTCGAA	1 cut(s)	2528
SinI	GGWCC	6 cut(s)	396, 921, 1051, 1307, 1675, 2086
SseBI	AGGCCT	1 cut(s)	2234
SstI	GAGCTC	1 cut(s)	2027
StuI	AGGCCT	1 cut(s)	2234
StyD4I	CCNGG	4 cut(s)	335, 824, 965, 2606
StyI	CCWWGG	4 cut(s)	924, 1441, 1856, 2448
TaiI	ACGT	5 cut(s)	729, 852, 1155, 2362, 2379
TaqII	GACCGA	2 cut(s)	1068, 2132
TatI	WGTACW	6 cut(s)	804, 885, 1249, 1605, 1785, 2133
TauI	GCSGC	2 cut(s)	120, 1550
TfiI	GAWTC	3 cut(s)	1390, 1446, 2525
Tru1I	TTAA	7 cut(s)	137, 201, 261, 1191, 1653, 2402, 2595
Tru9I	TTAA	7 cut(s)	137, 201, 261, 1191, 1653, 2402, 2595
TscAI	CASTG	7 cut(s)	766, 1051, 1212, 1921, 2067, 2199, 2644
TseFI	GTSAC	1 cut(s)	2545
TseI	GCWGC	2 cut(s)	1342, 1889
Tsp45I	GTSAC	1 cut(s)	2545
TspDTI	ATGAA	8 cut(s)	17, 363, 534, 1150, 1518, 1835, 2384, 2492
TspGWI	ACGGA	3 cut(s)	1940, 2352, 2433
TspRI	CASTG	7 cut(s)	766, 1051, 1212, 1921, 2067, 2199, 2644
Tth111I	GACNNNGTC	2 cut(s)	2035, 2515
Van91I	CCANNNNNTGG	1 cut(s)	1729
VpaK11BI	GGWCC	6 cut(s)	396, 921, 1051, 1307, 1675, 2086
XapI	RAATTY	2 cut(s)	308, 971
XceI	RCATGY	1 cut(s)	2101
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1880
XmiI	GTMKAC	1 cut(s)	792
ZrmI	AGTACT	2 cut(s)	806, 887
Zsp2I	ATGCAT	1 cut(s)	2343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.