Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001873.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

1377 .. 7417

Gene Structure 6041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001873.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

atgaaaccaattctcgctcctctctaccctttcagcttcctcttcgtcaccctactgaggagatataaactcgaatctttgcaagcatcagacagctacacgacttatttggcgccgccgtacgccacagcacggctttctcactcagaatttacttaccggtttcccgtcaatcctggccaaaagttcatccgcttgtatttctacccagattcatacaacgccgacttcgaacgctccgagtctctcttctctgtcaaagccggtggctacacccttctcaaagacttcaatgcttctgtcactggagatgctcatggtgattcttctgagaagatgctcaaagaattctgtattaacattgagcaagaacaacaggtgctgaacatcacattcactcccagcaaagatggatacgcgtttatcaacgggattgaaattatgtccatgcctgcctctctttactacactgcagcccaaggcgatgggcctagtcttatcggcacccaaaaccggtaccctgtgaaaaacaacaccgctctggagaatatctaccgaatcaacgtcggtggatacaacgacttcagtggatactcgctctcaccgaatgaagacaccggcatgtaccgcacctgggattcaatggatgactactacatattgcaatattcaaatttctggccgagaccaaccagatttgaccttcagctcaaatttgcaagaatccctacctacactgccccggaagaggtttaccgaaccggccggtcaatgggggacaaagccatcaacttgagccacaatctcacctgggggtttcctgtagatccacaatttaattacctggtgaggcttcatttttgtgagattgtaccaaattatacgatgcatggagatcgtgtgtttcagatttttatagataaccaaacagcggagcagaaagcggacataatccaatggagtggaggaaatggaattcccgtatatagagactaccttgtgttcgtgcccagtcgtccaaacaagaagaaaggtaaagttgatatcactgttgcactacaagcaaattcggaatctagatataaggatgcaatcttgaatgggctagaaatcttcaaactgaatgacacaaacggcaatctcgccggacccaatcccgacccaccacctccaccaccactacctccaccgccacagccaccaccgccgttctcaatccagacacaaacggaacaacctaatgtgaaaccgcttcctatgcttcctacccttgccggtgcagtttcggtcttacttgttctttccctagtcgtgtttttacaatgcaggcgtggaacagaagtcaaggactccagctccagccacaggatgacgaggccagccatgaccagtaggtcacatttaccctcttatttgtgtcgttacttttcactggcagagatcaaagccgccaccaaatacttcgatgatactttcattattggagctgggggatttggcaacgtatacaaaggattcatcgatggtggaggcactccagttgcaatcaaacggctgaaagccatgtcatcacaagggtcccgcgagtttaggacggaaattgaaatgctctctcgactccgccaccgccatttggtgtctcttatcggattttgtgccgatgaaggtgagatgatcttggtgtatgattacatggcacgtgggactcttcgtgaccatctctaccacagtgataatccacctcttccatgggaacatcggcttcaaatttgtattggcgcggcgcaaggtttgcactatcttcacacaggtaccaatggcaccataattcaccgtgacgtaaagagcacaaacatattattggatgagaaatgggtagccaaggtttcagattttgggttgtcgagaaagggcacaatcaccgtgtctaagacccacattagcacgaaggtgaagggtagttttggatatcttgacccggattactatcgacgtcaacaattaactgagaagtctgatgtgtactccttcggtgtagtgttgtgcgaggtattgtgtggaaggccagctataacaaccgtagataataatcgagttggcttagctggatgggccaagaagtgtcatcataataggaaacttgatcaaattattgacccaaatttaaacgacctcaagtccaccaagtctctgccgtccgacttgtgttgtcagtcgtcaccttgcactggtggataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

745

Amino Acids

83.81

Weight (kDa)

8.57

Isoelectric Point (pI)

45.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1393
AatII	GACGTC	1 cut(s)	1996
Acc65I	GGTACC	2 cut(s)	516, 1811
AccB1I	GGYRCC	5 cut(s)	112, 503, 516, 1811, 1820
AccBSI	CCGCTC	1 cut(s)	539
AccI	GTMKAC	1 cut(s)	1506
AccII	CGCG	3 cut(s)	419, 1584, 1781
AclWI	GGATC	1 cut(s)	821
AcoI	YGGCCR	3 cut(s)	178, 680, 763
AcsI	RAATTY	8 cut(s)	149, 347, 673, 713, 975, 1066, 1767, 2161
AcuI	CTGAAG	2 cut(s)	568, 689
AcvI	CACGTG	1 cut(s)	1700
AcyI	GRCGYC	2 cut(s)	113, 1993
AfaI	GTAC	6 cut(s)	122, 518, 626, 873, 1813, 2024
AflIII	ACRYGT	1 cut(s)	417
AgeI	ACCGGT	2 cut(s)	159, 513
AgsI	TTSAA	8 cut(s)	292, 437, 642, 672, 1099, 1117, 1604, 1766
AhdI	GACNNNNNGTC	1 cut(s)	2176
AjnI	CCWGG	4 cut(s)	175, 632, 809, 843
AleI	CACNNNNGTG	1 cut(s)	1949
AluBI	AGCT	7 cut(s)	36, 96, 709, 1356, 1487, 2069, 2105
AluI	AGCT	7 cut(s)	36, 96, 709, 1356, 1487, 2069, 2105
Alw21I	GWGCWC	1 cut(s)	1850
Alw26I	GTCTC	5 cut(s)	249, 679, 984, 1644, 2193
AlwI	GGATC	1 cut(s)	821
AlwNI	CAGNNNCTG	1 cut(s)	382
AoxI	GGCC	7 cut(s)	178, 488, 680, 763, 1376, 2063, 2112
ApeKI	GCWGC	1 cut(s)	473
ApoI	RAATTY	8 cut(s)	149, 347, 673, 713, 975, 1066, 1767, 2161
AsiGI	ACCGGT	2 cut(s)	159, 513
Asp718I	GGTACC	2 cut(s)	516, 1811
AspLEI	GCGC	3 cut(s)	115, 1781, 1786
AspS9I	GGNCC	4 cut(s)	488, 1148, 1578, 2112
AsuC2I	CCSGG	2 cut(s)	743, 1979
AsuII	TTCGAA	1 cut(s)	231
AvaII	GGWCC	2 cut(s)	1148, 1578
BaeGI	GKGCMC	2 cut(s)	1011, 1916
BaeI	ACNNNNGTAYC	2 cut(s)	1795, 1828
BalI	TGGCCA	1 cut(s)	180
BanI	GGYRCC	5 cut(s)	112, 503, 516, 1811, 1820
BbrPI	CACGTG	1 cut(s)	1700
BbsI	GAAGAC	1 cut(s)	618
Bbv12I	GWGCWC	1 cut(s)	1850
BbvI	GCAGC	1 cut(s)	485
BccI	CCATC	6 cut(s)	404, 479, 794, 1517, 1725, 2103
BceAI	ACGGC	6 cut(s)	103, 149, 1150, 1192, 1568, 2179
BcgI	CGANNNNNNTGC	2 cut(s)	878, 912
BciT130I	CCWGG	4 cut(s)	177, 634, 811, 845
BciVI	GTATCC	3 cut(s)	407, 566, 584
BclI	TGATCA	1 cut(s)	2143
BcnI	CCSGG	2 cut(s)	743, 1979
BcoDI	GTCTC	5 cut(s)	249, 679, 984, 1644, 2193
BfaI	CTAG	4 cut(s)	492, 1077, 1106, 1307
BfmI	CTRYAG	2 cut(s)	471, 822
BfoI	RGCGCY	1 cut(s)	116
BfuI	GTATCC	3 cut(s)	407, 566, 584
BisI	GCNGC	4 cut(s)	116, 474, 1449, 1782
BlpI	GCTNAGC	1 cut(s)	2101
BlsI	GCNGC	4 cut(s)	117, 475, 1450, 1783
Bme1390I	CCNGG	6 cut(s)	177, 634, 743, 811, 845, 1979
Bme18I	GGWCC	2 cut(s)	1148, 1578
BmeRI	GACNNNNNGTC	1 cut(s)	2176
BmgT120I	GGNCC	4 cut(s)	488, 1148, 1578, 2112
BmiI	GGNNCC	8 cut(s)	114, 505, 518, 1150, 1579, 1580, 1813, 1822
BmrFI	CCNGG	6 cut(s)	177, 634, 743, 811, 845, 1979
BmrI	ACTGGG	1 cut(s)	1005
BmsI	GCATC	5 cut(s)	95, 301, 327, 876, 1078
BmuI	ACTGGG	1 cut(s)	1005
BpiI	GAAGAC	1 cut(s)	618
BpmI	CTGGAG	5 cut(s)	327, 563, 1336, 1342, 1521
Bpu1102I	GCTNAGC	1 cut(s)	2101
Bpu14I	TTCGAA	1 cut(s)	231
BpuEI	CTTGAG	2 cut(s)	814, 2159
BpuMI	CCSGG	2 cut(s)	743, 1979
Bsa29I	ATCGAT	1 cut(s)	1521
BsaAI	YACGTR	1 cut(s)	1700
BsaBI	GATNNNNATC	2 cut(s)	1986, 2088
BsaHI	GRCGYC	2 cut(s)	113, 1993
BsaI	GGTCTC	1 cut(s)	679
BsaJI	CCNNGG	6 cut(s)	478, 633, 741, 810, 1748, 1881
BsaWI	WCCGGW	2 cut(s)	159, 513
BsaXI	ACNNNNNCTCC	6 cut(s)	382, 412, 885, 915, 1340, 1370
Bse118I	RCCGGY	7 cut(s)	159, 263, 513, 617, 761, 765, 1274
Bse1I	ACTGG	6 cut(s)	310, 1011, 1389, 1437, 1538, 2233
Bse8I	GATNNNNATC	2 cut(s)	1986, 2088
BseBI	CCWGG	4 cut(s)	177, 634, 811, 845
BseCI	ATCGAT	1 cut(s)	1521
BseDI	CCNNGG	6 cut(s)	478, 633, 741, 810, 1748, 1881
BseGI	GGATG	6 cut(s)	189, 652, 1093, 1374, 1870, 2114
BseJI	GATNNNNATC	2 cut(s)	1986, 2088
BseMII	CTCAG	4 cut(s)	47, 159, 321, 1998
BseNI	ACTGG	6 cut(s)	310, 1011, 1389, 1437, 1538, 2233
BseRI	GAGGAG	2 cut(s)	9, 73
BseSI	GKGCMC	2 cut(s)	1011, 1916
BseX3I	CGGCCG	1 cut(s)	763
BseXI	GCAGC	1 cut(s)	485
BseYI	CCCAGC	2 cut(s)	401, 1487
BsgI	GTGCAG	1 cut(s)	1299
Bsh1236I	CGCG	3 cut(s)	419, 1584, 1781
Bsh1285I	CGRYCG	1 cut(s)	766
BshFI	GGCC	7 cut(s)	180, 490, 682, 765, 1378, 2065, 2114
BshNI	GGYRCC	5 cut(s)	112, 503, 516, 1811, 1820
BshTI	ACCGGT	2 cut(s)	159, 513
BshVI	ATCGAT	1 cut(s)	1521
BsiEI	CGRYCG	1 cut(s)	766
BsiHKAI	GWGCWC	1 cut(s)	1850
BsiWI	CGTACG	1 cut(s)	120
BslFI	GGGAC	3 cut(s)	791, 1564, 1717
BsmAI	GTCTC	5 cut(s)	249, 679, 984, 1644, 2193
BsmFI	GGGAC	3 cut(s)	791, 1564, 1717
BsnI	GGCC	7 cut(s)	180, 490, 682, 765, 1378, 2065, 2114
Bso31I	GGTCTC	1 cut(s)	679
Bsp119I	TTCGAA	1 cut(s)	231
Bsp1286I	GDGCHC	3 cut(s)	1011, 1850, 1916
Bsp143I	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
Bsp1720I	GCTNAGC	1 cut(s)	2101
Bsp19I	CCATGG	1 cut(s)	1748
BspANI	GGCC	7 cut(s)	180, 490, 682, 765, 1378, 2065, 2114
BspCNI	CTCAG	4 cut(s)	48, 158, 322, 1999
BspDI	ATCGAT	1 cut(s)	1521
BspFNI	CGCG	3 cut(s)	419, 1584, 1781
BspLI	GGNNCC	8 cut(s)	114, 505, 518, 1150, 1579, 1580, 1813, 1822
BspMAI	CTGCAG	1 cut(s)	475
BspPI	GGATC	1 cut(s)	821
BspT104I	TTCGAA	1 cut(s)	231
BspT107I	GGYRCC	5 cut(s)	112, 503, 516, 1811, 1820
BspTNI	GGTCTC	1 cut(s)	679
BsrBI	CCGCTC	1 cut(s)	539
BsrFI	RCCGGY	7 cut(s)	159, 263, 513, 617, 761, 765, 1274
BsrI	ACTGG	6 cut(s)	310, 1011, 1389, 1437, 1538, 2233
BssAI	RCCGGY	7 cut(s)	159, 263, 513, 617, 761, 765, 1274
BssECI	CCNNGG	6 cut(s)	478, 633, 741, 810, 1748, 1881
BssMI	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
BssNAI	GTATAC	1 cut(s)	1507
BssNI	GRCGYC	2 cut(s)	113, 1993
BssT1I	CCWWGG	3 cut(s)	478, 1748, 1881
Bst1107I	GTATAC	1 cut(s)	1507
Bst2UI	CCWGG	4 cut(s)	177, 634, 811, 845
Bst4CI	ACNGT	5 cut(s)	1051, 1730, 1835, 1924, 2080
Bst6I	CTCTTC	5 cut(s)	47, 254, 741, 1713, 1749
BstACI	GRCGYC	2 cut(s)	113, 1993
BstAPI	GCANNNNNTGC	1 cut(s)	1792
BstBAI	YACGTR	1 cut(s)	1700
BstBI	TTCGAA	1 cut(s)	231
BstC8I	GCNNGC	5 cut(s)	84, 453, 1328, 1380, 2067
BstDEI	CTNAG	6 cut(s)	56, 145, 330, 1929, 2007, 2101
BstDSI	CCRYGG	1 cut(s)	1748
BstF5I	GGATG	6 cut(s)	189, 652, 1093, 1374, 1870, 2114
BstFNI	CGCG	3 cut(s)	419, 1584, 1781
BstH2I	RGCGCY	1 cut(s)	116
BstHHI	GCGC	3 cut(s)	115, 1781, 1786
BstKTI	GATC	5 cut(s)	829, 898, 1443, 1677, 2146
BstMAI	GTCTC	5 cut(s)	249, 679, 984, 1644, 2193
BstMBI	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
BstMCI	CGRYCG	1 cut(s)	766
BstMWI	GCNNNNNNNGC	6 cut(s)	627, 1061, 1204, 1258, 1792, 2111
BstNI	CCWGG	4 cut(s)	177, 634, 811, 845
BstNSI	RCATGY	1 cut(s)	625
BstSCI	CCNGG	6 cut(s)	175, 632, 741, 809, 843, 1977
BstSFI	CTRYAG	2 cut(s)	471, 822
BstSLI	GKGCMC	2 cut(s)	1011, 1916
BstUI	CGCG	3 cut(s)	419, 1584, 1781
BstV1I	GCAGC	1 cut(s)	485
BstV2I	GAAGAC	1 cut(s)	618
BstX2I	RGATCY	1 cut(s)	826
BstXI	CCANNNNNNTGG	2 cut(s)	485, 962
BstYI	RGATCY	1 cut(s)	826
BstZ17I	GTATAC	1 cut(s)	1507
BstZI	CGGCCG	1 cut(s)	763
Bsu15I	ATCGAT	1 cut(s)	1521
BsuI	GTATCC	3 cut(s)	407, 566, 584
BsuRI	GGCC	7 cut(s)	180, 490, 682, 765, 1378, 2065, 2114
BsuTUI	ATCGAT	1 cut(s)	1521
BtgI	CCRYGG	1 cut(s)	1748
BtgZI	GCGATG	1 cut(s)	498
BtsCI	GGATG	6 cut(s)	189, 652, 1093, 1374, 1870, 2114
BtsI	GCAGTG	2 cut(s)	468, 735
BtsIMutI	CAGTG	8 cut(s)	303, 468, 592, 735, 1047, 1430, 1735, 2226
Cac8I	GCNNGC	5 cut(s)	84, 453, 1328, 1380, 2067
CaiI	CAGNNNCTG	1 cut(s)	382
CfoI	GCGC	3 cut(s)	115, 1781, 1786
Cfr10I	RCCGGY	7 cut(s)	159, 263, 513, 617, 761, 765, 1274
Cfr13I	GGNCC	4 cut(s)	488, 1148, 1578, 2112
ClaI	ATCGAT	1 cut(s)	1521
CsiI	ACCWGGT	1 cut(s)	843
Csp6I	GTAC	6 cut(s)	121, 517, 625, 872, 1812, 2023
CspAI	ACCGGT	2 cut(s)	159, 513
CspCI	CAANNNNNGTGG	4 cut(s)	247, 282, 550, 585
CviAII	CATG	8 cut(s)	317, 448, 622, 890, 1384, 1564, 1693, 1749
CviQI	GTAC	6 cut(s)	121, 517, 625, 872, 1812, 2023
DdeI	CTNAG	6 cut(s)	56, 145, 330, 1929, 2007, 2101
DinI	GGCGCC	1 cut(s)	114
DpnI	GATC	5 cut(s)	828, 897, 1442, 1676, 2145
DpnII	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
DraI	TTTAAA	1 cut(s)	2166
DrdI	GACNNNNNNGTC	1 cut(s)	1393
DriI	GACNNNNNGTC	1 cut(s)	2176
DseDI	GACNNNNNNGTC	1 cut(s)	1393
EaeI	YGGCCR	3 cut(s)	178, 680, 763
EagI	CGGCCG	1 cut(s)	763
Eam1104I	CTCTTC	5 cut(s)	47, 254, 741, 1713, 1749
Eam1105I	GACNNNNNGTC	1 cut(s)	2176
EarI	CTCTTC	5 cut(s)	47, 254, 741, 1713, 1749
EciI	GGCGGA	1 cut(s)	1610
EclXI	CGGCCG	1 cut(s)	763
Eco130I	CCWWGG	3 cut(s)	478, 1748, 1881
Eco31I	GGTCTC	1 cut(s)	679
Eco32I	GATATC	2 cut(s)	1045, 1970
Eco47I	GGWCC	2 cut(s)	1148, 1578
Eco52I	CGGCCG	1 cut(s)	763
Eco57I	CTGAAG	2 cut(s)	568, 689
Eco72I	CACGTG	1 cut(s)	1700
EcoO109I	RGGNCCY	1 cut(s)	1578
EcoRI	GAATTC	2 cut(s)	347, 975
EcoRII	CCWGG	4 cut(s)	175, 632, 809, 843
EcoRV	GATATC	2 cut(s)	1045, 1970
EcoT14I	CCWWGG	3 cut(s)	478, 1748, 1881
EcoT22I	ATGCAT	1 cut(s)	891
EgeI	GGCGCC	1 cut(s)	114
EheI	GGCGCC	1 cut(s)	114
ErhI	CCWWGG	3 cut(s)	478, 1748, 1881
FaeI	CATG	8 cut(s)	320, 451, 625, 893, 1387, 1567, 1696, 1752
FaqI	GGGAC	3 cut(s)	791, 1564, 1717
FatI	CATG	8 cut(s)	316, 447, 621, 889, 1383, 1563, 1692, 1748
FauI	CCCGC	1 cut(s)	1589
FbaI	TGATCA	1 cut(s)	2143
FblI	GTMKAC	1 cut(s)	1506
Fnu4HI	GCNGC	4 cut(s)	116, 474, 1449, 1782
FokI	GGATG	6 cut(s)	176, 659, 1100, 1381, 1877, 2121
Fsp4HI	GCNGC	4 cut(s)	116, 474, 1449, 1782
FspBI	CTAG	4 cut(s)	492, 1077, 1106, 1307
GlaI	GCGC	3 cut(s)	114, 1780, 1785
GluI	GCNGC	4 cut(s)	116, 474, 1449, 1782
GsaI	CCCAGC	2 cut(s)	405, 1491
GsuI	CTGGAG	5 cut(s)	327, 563, 1336, 1342, 1521
HaeII	RGCGCY	1 cut(s)	116
HaeIII	GGCC	7 cut(s)	180, 490, 682, 765, 1378, 2065, 2114
HhaI	GCGC	3 cut(s)	115, 1781, 1786
Hin1I	GRCGYC	2 cut(s)	113, 1993
Hin1II	CATG	8 cut(s)	320, 451, 625, 893, 1387, 1567, 1696, 1752
Hin6I	GCGC	3 cut(s)	113, 1779, 1784
HinP1I	GCGC	3 cut(s)	113, 1779, 1784
HincII	GTYRAC	1 cut(s)	1997
HindII	GTYRAC	1 cut(s)	1997
Hpy166II	GTNNAC	5 cut(s)	754, 1507, 1997, 2023, 2181
Hpy188III	TCNNGA	9 cut(s)	542, 1077, 1096, 1157, 1219, 1614, 1712, 1905, 1973
Hpy8I	GTNNAC	5 cut(s)	754, 1507, 1997, 2023, 2181
Hpy99I	CGWCG	2 cut(s)	569, 1995
HpyAV	CCTTC	7 cut(s)	287, 713, 1658, 1942, 1948, 2038, 2055
HpyCH4III	ACNGT	5 cut(s)	1051, 1730, 1835, 1924, 2080
HpyCH4IV	ACGT	5 cut(s)	564, 1503, 1699, 1839, 1993
HpyF10VI	GCNNNNNNNGC	6 cut(s)	627, 1061, 1204, 1258, 1792, 2111
HpyF3I	CTNAG	6 cut(s)	56, 145, 330, 1929, 2007, 2101
HpySE526I	ACGT	5 cut(s)	564, 1503, 1699, 1839, 1993
Hsp92I	GRCGYC	2 cut(s)	113, 1993
Hsp92II	CATG	8 cut(s)	320, 451, 625, 893, 1387, 1567, 1696, 1752
HspAI	GCGC	3 cut(s)	113, 1779, 1784
KasI	GGCGCC	1 cut(s)	112
KflI	GGGWCCC	1 cut(s)	1578
KpnI	GGTACC	2 cut(s)	520, 1815
Ksp22I	TGATCA	1 cut(s)	2143
Kzo9I	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
LmnI	GCTCC	5 cut(s)	22, 242, 934, 1361, 1484
Lsp1109I	GCAGC	1 cut(s)	485
LweI	GCATC	5 cut(s)	95, 301, 327, 876, 1078
MabI	ACCWGGT	1 cut(s)	843
MaeI	CTAG	4 cut(s)	492, 1077, 1106, 1307
MaeII	ACGT	5 cut(s)	564, 1503, 1699, 1839, 1993
MaeIII	GTNAC	7 cut(s)	46, 301, 1395, 1421, 1712, 1835, 2217
MalI	GATC	5 cut(s)	828, 897, 1442, 1676, 2145
MbiI	CCGCTC	1 cut(s)	539
MboI	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
MflI	RGATCY	1 cut(s)	826
MhlI	GDGCHC	3 cut(s)	1011, 1850, 1916
MlsI	TGGCCA	1 cut(s)	180
MluI	ACGCGT	1 cut(s)	417
MluNI	TGGCCA	1 cut(s)	180
Mly113I	GGCGCC	1 cut(s)	113
MlyI	GAGTC	4 cut(s)	251, 1343, 1611, 1699
MmeI	TCCRAC	1 cut(s)	2223
Mox20I	TGGCCA	1 cut(s)	180
Mph1103I	ATGCAT	1 cut(s)	891
MscI	TGGCCA	1 cut(s)	180
MseI	TTAA	4 cut(s)	357, 837, 2003, 2165
MslI	CAYNNNNRTG	3 cut(s)	620, 861, 1949
Msp20I	TGGCCA	1 cut(s)	180
MspA1I	CMGCKG	1 cut(s)	932
MspR9I	CCNGG	6 cut(s)	177, 634, 743, 811, 845, 1979
MteI	GCGCNGCGC	1 cut(s)	1782
MvaI	CCWGG	4 cut(s)	177, 634, 811, 845
MvnI	CGCG	3 cut(s)	419, 1584, 1781
MwoI	GCNNNNNNNGC	6 cut(s)	627, 1061, 1204, 1258, 1792, 2111
NarI	GGCGCC	1 cut(s)	113
NciI	CCSGG	2 cut(s)	743, 1979
NcoI	CCATGG	1 cut(s)	1748
NdeII	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
NlaIII	CATG	8 cut(s)	320, 451, 625, 893, 1387, 1567, 1696, 1752
NlaIV	GGNNCC	8 cut(s)	114, 505, 518, 1150, 1579, 1580, 1813, 1822
NmeAIII	GCCGAG	1 cut(s)	708
NmuCI	GTSAC	6 cut(s)	46, 301, 1395, 1712, 1835, 2217
NsiI	ATGCAT	1 cut(s)	891
NspI	RCATGY	1 cut(s)	625
NspV	TTCGAA	1 cut(s)	231
OliI	CACNNNNGTG	1 cut(s)	1949
PcsI	WCGNNNNNNNCGW	3 cut(s)	228, 237, 602
PfeI	GAWTC	8 cut(s)	74, 212, 323, 558, 638, 723, 1073, 1515
Pfl23II	CGTACG	1 cut(s)	120
PinAI	ACCGGT	2 cut(s)	159, 513
PkrI	GCNGC	4 cut(s)	117, 475, 1450, 1783
PleI	GAGTC	4 cut(s)	250, 1343, 1611, 1699
PluTI	GGCGCC	1 cut(s)	116
PmaCI	CACGTG	1 cut(s)	1700
PmlI	CACGTG	1 cut(s)	1700
PpsI	GAGTC	4 cut(s)	250, 1343, 1611, 1699
Ppu21I	YACGTR	1 cut(s)	1700
PpuMI	RGGWCCY	1 cut(s)	1578
Psp5II	RGGWCCY	1 cut(s)	1578
Psp6I	CCWGG	4 cut(s)	175, 632, 809, 843
PspCI	CACGTG	1 cut(s)	1700
PspFI	CCCAGC	2 cut(s)	401, 1487
PspGI	CCWGG	4 cut(s)	175, 632, 809, 843
PspLI	CGTACG	1 cut(s)	120
PspN4I	GGNNCC	8 cut(s)	114, 505, 518, 1150, 1579, 1580, 1813, 1822
PspPI	GGNCC	4 cut(s)	488, 1148, 1578, 2112
PspPPI	RGGWCCY	1 cut(s)	1578
PstI	CTGCAG	1 cut(s)	475
PstNI	CAGNNNCTG	1 cut(s)	382
PsuI	RGATCY	1 cut(s)	826
RsaI	GTAC	6 cut(s)	122, 518, 626, 873, 1813, 2024
RsaNI	GTAC	6 cut(s)	121, 517, 625, 872, 1812, 2023
RseI	CAYNNNNRTG	3 cut(s)	620, 861, 1949
SaqAI	TTAA	4 cut(s)	357, 837, 2003, 2165
SatI	GCNGC	4 cut(s)	116, 474, 1449, 1782
Sau3AI	GATC	5 cut(s)	826, 895, 1440, 1674, 2143
Sau96I	GGNCC	4 cut(s)	488, 1148, 1578, 2112
SchI	GAGTC	4 cut(s)	251, 1343, 1611, 1699
ScrFI	CCNGG	6 cut(s)	177, 634, 743, 811, 845, 1979
SduI	GDGCHC	3 cut(s)	1011, 1850, 1916
SexAI	ACCWGGT	1 cut(s)	843
SfaNI	GCATC	5 cut(s)	95, 301, 327, 876, 1078
SfcI	CTRYAG	2 cut(s)	471, 822
SfoI	GGCGCC	1 cut(s)	114
SfuI	TTCGAA	1 cut(s)	231
SinI	GGWCC	2 cut(s)	1148, 1578
SmiMI	CAYNNNNRTG	3 cut(s)	620, 861, 1949
SmlI	CTYRAG	2 cut(s)	793, 2174
SmoI	CTYRAG	2 cut(s)	793, 2174
SspDI	GGCGCC	1 cut(s)	112
SspI	AATATT	1 cut(s)	668
SspMI	CTAG	4 cut(s)	492, 1077, 1106, 1307
StyD4I	CCNGG	6 cut(s)	175, 632, 741, 809, 843, 1977
StyI	CCWWGG	3 cut(s)	478, 1748, 1881
TaaI	ACNGT	5 cut(s)	1051, 1730, 1835, 1924, 2080
TaiI	ACGT	5 cut(s)	567, 1506, 1702, 1842, 1996
TaqI	TCGA	8 cut(s)	72, 231, 1464, 1521, 1615, 1904, 1990, 2092
TaqII	GACCGA	1 cut(s)	1276
TatI	WGTACW	1 cut(s)	2022
TauI	GCSGC	3 cut(s)	118, 1451, 1784
TfiI	GAWTC	8 cut(s)	74, 212, 323, 558, 638, 723, 1073, 1515
Tru1I	TTAA	4 cut(s)	357, 837, 2003, 2165
Tru9I	TTAA	4 cut(s)	357, 837, 2003, 2165
TscAI	CASTG	8 cut(s)	310, 475, 592, 742, 1054, 1437, 1735, 2233
TseFI	GTSAC	6 cut(s)	46, 301, 1395, 1712, 1835, 2217
TseI	GCWGC	1 cut(s)	473
Tsp45I	GTSAC	6 cut(s)	46, 301, 1395, 1712, 1835, 2217
TspDTI	ATGAA	8 cut(s)	17, 178, 204, 624, 845, 1465, 1507, 1677
TspGWI	ACGGA	2 cut(s)	1244, 1610
TspRI	CASTG	8 cut(s)	310, 475, 592, 742, 1054, 1437, 1735, 2233
VpaK11BI	GGWCC	2 cut(s)	1148, 1578
XapI	RAATTY	8 cut(s)	149, 347, 673, 713, 975, 1066, 1767, 2161
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	1 cut(s)	625
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1746
XmiI	GTMKAC	1 cut(s)	1506
XspI	CTAG	4 cut(s)	492, 1077, 1106, 1307
ZraI	GACGTC	1 cut(s)	1994
Zsp2I	ATGCAT	1 cut(s)	891

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.