Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

5044629 .. 5047136

Gene Structure 2508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1062100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGAAGAACCGCAACACCAAACACCCTAATAAAACTCTCCCTCCTCTTCTCCTTCCCCTTTTTCTCCACATGATAACCATACACATGGCCGGGGACTCACCGCCAATCTACGATCCGCCTGAACAAATCAACCTTCAATGTGGCTCTTCCGGTACCAATGTCGACGAAGCCAACCGACTGTGGGAAGGAGATTTTGAAAAAGGATTTTTTCCATACGAGGACAAATCCATAATCAAAGAAGCACCTTCTCCCTCTTCTTCCGGCCAAGTGCCTTACAGCACAGCAAGGCTTTCCCGCTTTGAATTTACCTACACATTTCCACTCTCTTCCGGCCCAAAGTTCATCCGCTTGTATTTCTACCCAGCATCATACGCCCCCAACTTCAACCGATCCCAAGCCCTCTTCTCAGTCAAAGCCGGTGGCTTTACCCTTCTCCACGACTTCAACGCTTCAGCCACGGCTGATGCTTCTGCCTCGGATACTATATACAGAGAGTTCTGCCTCCACACTGAGTCAGGACAGGATTTGAGTATCAGCTTCACTCCAAGCAAAGCAAGCCCAGATGCCTACGCGTTTATCAATGGGATTGAAATTCTCTCCATGCCCCCATATCTTTACTACACTTCACCCAAGAGCCCGGATGGGGTTGCTCATGTAGGCAGTGAAAAGACGATTCGCATCGAGAACAACACTGCTCTGGAGATGGTGTACCGAATCAATATGGGTGGCGGAAGGCGGATCTCTTCCGATCAGGACACTGGTATGTACCGCAATTGGGATGGTTTGCGAGACGAATACAACTACTTAGACGATTTAAGTAGGCAGTTTAGTTACTTACCACCGCAATACAATAGCAGTCAGCTTTACTTTTCTAAAATACCATCGTACTCTGCTCCGAAAGAAGTTTACCAAACCGGCCGCTCAATGGACACCATAAGCAACAGCCACAATCTCACCTGGGAATTCCCTGTGGATTCAATGTTTGCTTACTTGGTTAGGCTTCATTTTTGTGAGTTTCTAAGTACTGTTATGAAGCCCGGAGACCGGGTATTTAACATCTACATCGCCAATCAATCCGTTGAGAAAATGGCGGATATAATCGCGTGGAGTGGTGGAAATGAAAGACCAGTGTACAGAGACTACGTTGTGTTCTTGTCGGGGAACCCTGCAATCCCGAAGAAAGTCAATCTCTTTCTTGCACTGGAATCGGATTTGTTGAATGGGTACTTTGTCCCAATCTTGAGCGGACTCGAAATGTTCAAACTCAGTGCAAATCGGAGTCTCGCCGGACCAAGCCCTGACCCACCTCCTATAGCCCCAGCAAAGGGGACACCATCAAAAACTAGCACCAGATCAAGAACTCCTTTGCTTGCCACGGTTGTCGGTGTAGCTTGCGGAATACTTGGACTCTCTGTCCTTGGGTTCTTGGTTTTTAGGCGGCGGCGGAAAGTCAAGGGCACTGCCTCAGATGGGTCATCATCTTTACCAACACATTTGTGTCGTTACTTTTCACTGGCGGAGATCAAAGCCGCCACCCAAAACTTCAGCCAGAGTTTCATTGTTGGTGTAGGCGGCTTCGGTCACGTGTACAAAGGGCATATCGACGGCGGGGCCACTCCCGTTGCTATCAAACGGCTGAAACCCGACTCATCGCAAGGAGCCCGCGAGTTCAAGACGGAAATCGAGCTGCTTTCAGAACTTAGACACCGTCATTTGGTGTCTCTCATTGGGTATTGTACTGATAAAAATGAGATGATTTTGGTGTACGATTACATGGCACGTGGAACCCTCGCTGATCACCTCTACCAAACTGACAACCCACTTCTCTCCTGGGGACAACGGCTCCAAATTTGCATTGGCGCTGCGCGAGGGCTGCGCTACCTTCACAGCGATGCCCAGGGCACAATCATCCACCGTGATGTGAAGAGCACAAACATTTTATTAGATGAGAAATGGGTTGCCAAGGTTTCGGATTTCGGATTGTCGAAAGTGGGCACGGCCACCATGTCCAAGACCCACATCAGCACGGCCGTGAAAGGTAGCTTCGGGTATCTAGACCCAGAATATTACCGACGTCAACAACTGACGGTGAAGTCCGACGTGTACTCATTCGGTGTAGTGTTGTGTGAGGTGTTGTGCGCAAGACCAGCTGTGGTGCATGCAACGGAGACGAGGCAAATGAACTTGGCTGAGTGGACCAAGAGCTGTCATCGCGACGGGGAACTTGATCAAATCATCGATCCGAACATGAAGGGTAAGATTGAAACCGAGTGTTTGAACAAGTATGTGGAAATTGCTATGAGTTGCATCAATGACAGTGGGATGGAAAGGCCGTCAATGAATGACGTTGTCAGGGGGCTTGAGTTTGCATTGCAACTACATCAGAACCGCGGTGAAAGGAACAACGAGGATGCCTTTGCTAGCATGCCAGGTTGCGCTACGAATGAATCCGTTCAGTGCATATCGGAGACGATCTTCTCAGAGATCAACGATCCGAATGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

836

Amino Acids

92.99

Weight (kDa)

6.86

Isoelectric Point (pI)

45.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	45 - 421	3.2e-28	Malectin-like domain
Malectin	PF11721	236 - 383	2.6e-12	Malectin domain
Pkinase	PF00069	520 - 784	6.4e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	521 - 786	1.2e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2092
AatII	GACGTC	1 cut(s)	2077
Acc16I	TGCGCA	1 cut(s)	2140
Acc65I	GGTACC	1 cut(s)	152
AccB1I	GGYRCC	1 cut(s)	152
AccBSI	CCGCTC	2 cut(s)	921, 1245
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	6 cut(s)	572, 1103, 1665, 1867, 2214, 2391
AclWI	GGATC	5 cut(s)	107, 384, 746, 2234, 2486
AcoI	YGGCCR	5 cut(s)	87, 262, 916, 1998, 2028
AcsI	RAATTY	4 cut(s)	302, 591, 962, 1848
AcuI	CTGAAG	2 cut(s)	435, 1528
AcvI	CACGTG	2 cut(s)	1585, 1781
AcyI	GRCGYC	1 cut(s)	2074
AfiI	CCNNNNNNNGG	9 cut(s)	181, 643, 775, 925, 1044, 1324, 1325, 1470, 1714
AflIII	ACRYGT	3 cut(s)	570, 1584, 2100
AhdI	GACNNNNNGTC	1 cut(s)	1412
AjiI	CACGTC	1 cut(s)	2101
AjnI	CCWGG	4 cut(s)	956, 1829, 1896, 2428
AleI	CACNNNNGTG	2 cut(s)	1495, 2030
AluBI	AGCT	7 cut(s)	537, 862, 1391, 1687, 2043, 2150, 2205
AluI	AGCT	7 cut(s)	537, 862, 1391, 1687, 2043, 2150, 2205
Alw21I	GWGCWC	1 cut(s)	1931
Alw26I	GTCTC	7 cut(s)	783, 1035, 1131, 1286, 1725, 2162, 2462
AlwI	GGATC	5 cut(s)	107, 384, 746, 2234, 2486
AoxI	GGCC	8 cut(s)	87, 262, 331, 916, 1611, 1998, 2028, 2330
ApeKI	GCWGC	3 cut(s)	1687, 1862, 1873
ApoI	RAATTY	4 cut(s)	302, 591, 962, 1848
Asp700I	GAANNNNTTC	1 cut(s)	2451
Asp718I	GGTACC	1 cut(s)	152
AspLEI	GCGC	5 cut(s)	1862, 1867, 1878, 2141, 2438
AspS9I	GGNCC	4 cut(s)	332, 1289, 1611, 2196
AsuC2I	CCSGG	4 cut(s)	91, 638, 1038, 1046
AsuHPI	GGTGA	6 cut(s)	90, 618, 946, 1790, 2101, 2405
AsuNHI	GCTAGC	1 cut(s)	2420
AvaII	GGWCC	2 cut(s)	1289, 2196
BaeGI	GKGCMC	3 cut(s)	1460, 1904, 1997
BaeI	ACNNNNGTAYC	2 cut(s)	144, 177
BanI	GGYRCC	1 cut(s)	152
BanII	GRGCYC	2 cut(s)	638, 1663
BbrPI	CACGTG	2 cut(s)	1585, 1781
Bbv12I	GWGCWC	1 cut(s)	1931
BbvI	GCAGC	3 cut(s)	1674, 1849, 1860
BccI	CCATC	7 cut(s)	635, 697, 773, 889, 1342, 1463, 2317
BceAI	ACGGC	8 cut(s)	474, 1621, 1649, 1856, 2013, 2015, 2043, 2317
BcgI	CGANNNNNNTGC	2 cut(s)	1188, 1222
BciT130I	CCWGG	4 cut(s)	958, 1831, 1898, 2430
BciVI	GTATCC	1 cut(s)	472
BclI	TGATCA	2 cut(s)	1795, 2227
BcnI	CCSGG	4 cut(s)	91, 638, 1038, 1046
BcoDI	GTCTC	7 cut(s)	783, 1035, 1131, 1286, 1725, 2162, 2462
BfaI	CTAG	3 cut(s)	1344, 2054, 2421
BfmI	CTRYAG	1 cut(s)	1311
BfoI	RGCGCY	1 cut(s)	1863
BfuI	GTATCC	1 cut(s)	472
BisI	GCNGC	8 cut(s)	919, 1439, 1442, 1530, 1573, 1688, 1863, 1874
BlsI	GCNGC	8 cut(s)	920, 1440, 1443, 1531, 1574, 1689, 1864, 1875
BmcAI	AGTACT	1 cut(s)	1024
Bme1390I	CCNGG	8 cut(s)	91, 638, 958, 1038, 1046, 1831, 1898, 2430
Bme18I	GGWCC	2 cut(s)	1289, 2196
BmeRI	GACNNNNNGTC	1 cut(s)	1412
BmgBI	CACGTC	1 cut(s)	2101
BmgT120I	GGNCC	4 cut(s)	332, 1289, 1611, 2196
BmiI	GGNNCC	6 cut(s)	154, 1163, 1612, 1660, 1786, 1844
BmrFI	CCNGG	8 cut(s)	91, 638, 958, 1038, 1046, 1831, 1898, 2430
BmsI	GCATC	7 cut(s)	374, 454, 553, 687, 1882, 2316, 2401
BmtI	GCTAGC	1 cut(s)	2424
BpmI	CTGGAG	1 cut(s)	719
BpuEI	CTTGAG	2 cut(s)	1261, 2381
BpuMI	CCSGG	4 cut(s)	91, 638, 1038, 1046
Bsa29I	ATCGAT	1 cut(s)	2238
BsaAI	YACGTR	2 cut(s)	1585, 1781
BsaBI	GATNNNNATC	1 cut(s)	677
BsaHI	GRCGYC	1 cut(s)	2074
BsaI	GGTCTC	1 cut(s)	1035
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	8 cut(s)	25, 55, 692, 722, 1032, 1062, 1827, 1857
Bsc4I	CCNNNNNNNGG	9 cut(s)	181, 643, 775, 925, 1044, 1324, 1325, 1470, 1714
Bse118I	RCCGGY	2 cut(s)	416, 914
Bse1I	ACTGG	4 cut(s)	763, 1127, 1206, 1518
Bse3DI	GCAATG	1 cut(s)	2369
Bse8I	GATNNNNATC	1 cut(s)	677
BseBI	CCWGG	4 cut(s)	958, 1831, 1898, 2430
BseCI	ATCGAT	1 cut(s)	2238
BseGI	GGATG	6 cut(s)	342, 646, 784, 1908, 2328, 2416
BseJI	GATNNNNATC	1 cut(s)	677
BseLI	CCNNNNNNNGG	9 cut(s)	181, 643, 775, 925, 1044, 1324, 1325, 1470, 1714
BseMI	GCAATG	1 cut(s)	2369
BseMII	CTCAG	6 cut(s)	420, 501, 1279, 1479, 2181, 2493
BseNI	ACTGG	4 cut(s)	763, 1127, 1206, 1518
BseRI	GAGGAG	1 cut(s)	33
BseSI	GKGCMC	3 cut(s)	1460, 1904, 1997
BseX3I	CGGCCG	2 cut(s)	916, 2028
BseXI	GCAGC	3 cut(s)	1674, 1849, 1860
BseYI	CCCAGC	2 cut(s)	361, 1318
Bsh1236I	CGCG	6 cut(s)	572, 1103, 1665, 1867, 2214, 2391
Bsh1285I	CGRYCG	2 cut(s)	919, 2031
BshFI	GGCC	8 cut(s)	89, 264, 333, 918, 1613, 2000, 2030, 2332
BshNI	GGYRCC	1 cut(s)	152
BshVI	ATCGAT	1 cut(s)	2238
BsiEI	CGRYCG	2 cut(s)	919, 2031
BsiHKAI	GWGCWC	1 cut(s)	1931
BslFI	GGGAC	4 cut(s)	107, 1217, 1342, 1848
BslI	CCNNNNNNNGG	9 cut(s)	181, 643, 775, 925, 1044, 1324, 1325, 1470, 1714
BsmAI	GTCTC	7 cut(s)	783, 1035, 1131, 1286, 1725, 2162, 2462
BsmBI	CGTCTC	3 cut(s)	783, 2162, 2462
BsmFI	GGGAC	4 cut(s)	107, 1217, 1342, 1848
BsnI	GGCC	8 cut(s)	89, 264, 333, 918, 1613, 2000, 2030, 2332
Bso31I	GGTCTC	1 cut(s)	1035
Bsp1286I	GDGCHC	6 cut(s)	638, 1460, 1663, 1904, 1931, 1997
Bsp1407I	TGTACA	2 cut(s)	1131, 1587
Bsp68I	TCGCGA	1 cut(s)	2214
BspANI	GGCC	8 cut(s)	89, 264, 333, 918, 1613, 2000, 2030, 2332
BspCNI	CTCAG	6 cut(s)	419, 502, 1278, 1478, 2182, 2492
BspDI	ATCGAT	1 cut(s)	2238
BspFNI	CGCG	6 cut(s)	572, 1103, 1665, 1867, 2214, 2391
BspLI	GGNNCC	6 cut(s)	154, 1163, 1612, 1660, 1786, 1844
BspOI	GCTAGC	1 cut(s)	2424
BspPI	GGATC	5 cut(s)	107, 384, 746, 2234, 2486
BspQI	GCTCTTC	2 cut(s)	151, 1919
BspT107I	GGYRCC	1 cut(s)	152
BspTNI	GGTCTC	1 cut(s)	1035
BsrBI	CCGCTC	2 cut(s)	921, 1245
BsrDI	GCAATG	1 cut(s)	2369
BsrFI	RCCGGY	2 cut(s)	416, 914
BsrGI	TGTACA	2 cut(s)	1131, 1587
BsrI	ACTGG	4 cut(s)	763, 1127, 1206, 1518
BssAI	RCCGGY	2 cut(s)	416, 914
BssNI	GRCGYC	1 cut(s)	2074
BssT1I	CCWWGG	2 cut(s)	1417, 1962
Bst2UI	CCWGG	4 cut(s)	958, 1831, 1898, 2430
Bst4CI	ACNGT	7 cut(s)	180, 1027, 1378, 1709, 1916, 2089, 2318
Bst6I	CTCTTC	7 cut(s)	51, 151, 259, 331, 407, 748, 1919
BstACI	GRCGYC	1 cut(s)	2074
BstAUI	TGTACA	2 cut(s)	1131, 1587
BstBAI	YACGTR	2 cut(s)	1585, 1781
BstC8I	GCNNGC	7 cut(s)	556, 1371, 1393, 1663, 2160, 2422, 2426
BstDEI	CTNAG	9 cut(s)	406, 510, 805, 1019, 1265, 1465, 1700, 2190, 2479
BstDSI	CCRYGG	3 cut(s)	456, 1374, 2389
BstF5I	GGATG	6 cut(s)	342, 646, 784, 1908, 2328, 2416
BstFNI	CGCG	6 cut(s)	572, 1103, 1665, 1867, 2214, 2391
BstH2I	RGCGCY	1 cut(s)	1863
BstHHI	GCGC	5 cut(s)	1862, 1867, 1878, 2141, 2438
BstMAI	GTCTC	7 cut(s)	783, 1035, 1131, 1286, 1725, 2162, 2462
BstMCI	CGRYCG	2 cut(s)	919, 2031
BstMWI	GCNNNNNNNGC	5 cut(s)	371, 555, 1873, 2147, 2211
BstNI	CCWGG	4 cut(s)	958, 1831, 1898, 2430
BstNSI	RCATGY	2 cut(s)	2162, 2428
BstSCI	CCNGG	8 cut(s)	89, 636, 956, 1036, 1044, 1829, 1896, 2428
BstSFI	CTRYAG	1 cut(s)	1311
BstSLI	GKGCMC	3 cut(s)	1460, 1904, 1997
BstUI	CGCG	6 cut(s)	572, 1103, 1665, 1867, 2214, 2391
BstV1I	GCAGC	3 cut(s)	1674, 1849, 1860
BstX2I	RGATCY	1 cut(s)	738
BstXI	CCANNNNNNTGG	1 cut(s)	85
BstYI	RGATCY	1 cut(s)	738
BstZI	CGGCCG	2 cut(s)	916, 2028
Bsu15I	ATCGAT	1 cut(s)	2238
BsuI	GTATCC	1 cut(s)	472
BsuRI	GGCC	8 cut(s)	89, 264, 333, 918, 1613, 2000, 2030, 2332
BsuTUI	ATCGAT	1 cut(s)	2238
BtgI	CCRYGG	3 cut(s)	456, 1374, 2389
BtgZI	GCGATG	4 cut(s)	1048, 1635, 1905, 2195
BtrI	CACGTC	1 cut(s)	2101
BtsCI	GGATG	6 cut(s)	342, 646, 784, 1908, 2328, 2416
BtsI	GCAGTG	3 cut(s)	667, 690, 1458
BtuMI	TCGCGA	1 cut(s)	2214
Cac8I	GCNNGC	7 cut(s)	556, 1371, 1393, 1663, 2160, 2422, 2426
CfoI	GCGC	5 cut(s)	1862, 1867, 1878, 2141, 2438
Cfr10I	RCCGGY	2 cut(s)	416, 914
Cfr13I	GGNCC	4 cut(s)	332, 1289, 1611, 2196
Cfr42I	CCGCGG	1 cut(s)	2392
ClaI	ATCGAT	1 cut(s)	2238
CspCI	CAANNNNNGTGG	8 cut(s)	400, 435, 706, 741, 1603, 1638, 2299, 2334
CviAII	CATG	9 cut(s)	70, 85, 601, 653, 1774, 2005, 2159, 2248, 2425
DdeI	CTNAG	9 cut(s)	406, 510, 805, 1019, 1265, 1465, 1700, 2190, 2479
DrdI	GACNNNNNNGTC	1 cut(s)	2092
DriI	GACNNNNNGTC	1 cut(s)	1412
DseDI	GACNNNNNNGTC	1 cut(s)	2092
EaeI	YGGCCR	5 cut(s)	87, 262, 916, 1998, 2028
EagI	CGGCCG	2 cut(s)	916, 2028
Eam1104I	CTCTTC	7 cut(s)	51, 151, 259, 331, 407, 748, 1919
Eam1105I	GACNNNNNGTC	1 cut(s)	1412
EarI	CTCTTC	7 cut(s)	51, 151, 259, 331, 407, 748, 1919
EciI	GGCGGA	6 cut(s)	105, 744, 751, 1106, 1459, 1532
EclXI	CGGCCG	2 cut(s)	916, 2028
Eco130I	CCWWGG	2 cut(s)	1417, 1962
Eco24I	GRGCYC	2 cut(s)	638, 1663
Eco31I	GGTCTC	1 cut(s)	1035
Eco47I	GGWCC	2 cut(s)	1289, 2196
Eco52I	CGGCCG	2 cut(s)	916, 2028
Eco57I	CTGAAG	2 cut(s)	435, 1528
Eco72I	CACGTG	2 cut(s)	1585, 1781
EcoRI	GAATTC	1 cut(s)	962
EcoRII	CCWGG	4 cut(s)	956, 1829, 1896, 2428
EcoT14I	CCWWGG	2 cut(s)	1417, 1962
EcoT38I	GRGCYC	2 cut(s)	638, 1663
ErhI	CCWWGG	2 cut(s)	1417, 1962
Esp3I	CGTCTC	3 cut(s)	783, 2162, 2462
FaeI	CATG	9 cut(s)	73, 88, 604, 656, 1777, 2008, 2162, 2251, 2428
FalI	AAGNNNNNCTT	2 cut(s)	1348, 1380
FaqI	GGGAC	4 cut(s)	107, 1217, 1342, 1848
FatI	CATG	9 cut(s)	69, 84, 600, 652, 1773, 2004, 2158, 2247, 2424
FauI	CCCGC	3 cut(s)	302, 1601, 1670
FbaI	TGATCA	2 cut(s)	1795, 2227
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	8 cut(s)	919, 1439, 1442, 1530, 1573, 1688, 1863, 1874
FokI	GGATG	6 cut(s)	329, 653, 791, 1895, 2335, 2423
FriOI	GRGCYC	2 cut(s)	638, 1663
Fsp4HI	GCNGC	8 cut(s)	919, 1439, 1442, 1530, 1573, 1688, 1863, 1874
FspBI	CTAG	3 cut(s)	1344, 2054, 2421
FspI	TGCGCA	1 cut(s)	2140
GlaI	GCGC	5 cut(s)	1861, 1866, 1877, 2140, 2437
GluI	GCNGC	8 cut(s)	919, 1439, 1442, 1530, 1573, 1688, 1863, 1874
GsaI	CCCAGC	2 cut(s)	365, 1322
GsuI	CTGGAG	1 cut(s)	719
HaeII	RGCGCY	1 cut(s)	1863
HaeIII	GGCC	8 cut(s)	89, 264, 333, 918, 1613, 2000, 2030, 2332
HhaI	GCGC	5 cut(s)	1862, 1867, 1878, 2141, 2438
Hin1I	GRCGYC	1 cut(s)	2074
Hin1II	CATG	9 cut(s)	73, 88, 604, 656, 1777, 2008, 2162, 2251, 2428
Hin6I	GCGC	5 cut(s)	1860, 1865, 1876, 2139, 2436
HinP1I	GCGC	5 cut(s)	1860, 1865, 1876, 2139, 2436
HincII	GTYRAC	2 cut(s)	163, 2078
HindII	GTYRAC	2 cut(s)	163, 2078
HphI	GGTGA	6 cut(s)	90, 618, 946, 1790, 2101, 2405
Hpy166II	GTNNAC	9 cut(s)	163, 709, 907, 1132, 1588, 1765, 2078, 2104, 2196
Hpy8I	GTNNAC	9 cut(s)	163, 709, 907, 1132, 1588, 1765, 2078, 2104, 2196
Hpy99I	CGWCG	5 cut(s)	167, 1607, 2076, 2102, 2219
HpyAV	CCTTC	8 cut(s)	62, 143, 179, 255, 440, 726, 1892, 2245
HpyCH4III	ACNGT	7 cut(s)	180, 1027, 1378, 1709, 1916, 2089, 2318
HpyCH4IV	ACGT	6 cut(s)	1143, 1584, 1780, 2074, 2100, 2346
HpyF10VI	GCNNNNNNNGC	5 cut(s)	371, 555, 1873, 2147, 2211
HpyF3I	CTNAG	9 cut(s)	406, 510, 805, 1019, 1265, 1465, 1700, 2190, 2479
HpySE526I	ACGT	6 cut(s)	1143, 1584, 1780, 2074, 2100, 2346
Hsp92I	GRCGYC	1 cut(s)	2074
Hsp92II	CATG	9 cut(s)	73, 88, 604, 656, 1777, 2008, 2162, 2251, 2428
HspAI	GCGC	5 cut(s)	1860, 1865, 1876, 2139, 2436
KpnI	GGTACC	1 cut(s)	156
Ksp22I	TGATCA	2 cut(s)	1795, 2227
KspI	CCGCGG	1 cut(s)	2392
LguI	GCTCTTC	2 cut(s)	151, 1919
LmnI	GCTCC	3 cut(s)	898, 1658, 1848
Lsp1109I	GCAGC	3 cut(s)	1674, 1849, 1860
LweI	GCATC	7 cut(s)	374, 454, 553, 687, 1882, 2316, 2401
MaeI	CTAG	3 cut(s)	1344, 2054, 2421
MaeII	ACGT	6 cut(s)	1143, 1584, 1780, 2074, 2100, 2346
MaeIII	GTNAC	3 cut(s)	830, 1502, 1580
MbiI	CCGCTC	2 cut(s)	921, 1245
MfeI	CAATTG	1 cut(s)	772
MflI	RGATCY	1 cut(s)	738
MhlI	GDGCHC	6 cut(s)	638, 1460, 1663, 1904, 1931, 1997
MluCI	AATT	6 cut(s)	302, 591, 772, 962, 1848, 2292
MluI	ACGCGT	1 cut(s)	570
MlyI	GAGTC	6 cut(s)	89, 521, 1242, 1288, 1401, 1640
MmeI	TCCRAC	1 cut(s)	2121
MroXI	GAANNNNTTC	1 cut(s)	2451
MseI	TTAA	2 cut(s)	815, 1053
MslI	CAYNNNNRTG	7 cut(s)	83, 761, 1008, 1495, 1890, 1917, 2030
MspA1I	CMGCKG	2 cut(s)	2150, 2391
MspR9I	CCNGG	8 cut(s)	91, 638, 958, 1038, 1046, 1831, 1898, 2430
MteI	GCGCNGCGC	1 cut(s)	1863
MunI	CAATTG	1 cut(s)	772
MvaI	CCWGG	4 cut(s)	958, 1831, 1898, 2430
MvnI	CGCG	6 cut(s)	572, 1103, 1665, 1867, 2214, 2391
MwoI	GCNNNNNNNGC	5 cut(s)	371, 555, 1873, 2147, 2211
NciI	CCSGG	4 cut(s)	91, 638, 1038, 1046
NheI	GCTAGC	1 cut(s)	2420
NlaIII	CATG	9 cut(s)	73, 88, 604, 656, 1777, 2008, 2162, 2251, 2428
NlaIV	GGNNCC	6 cut(s)	154, 1163, 1612, 1660, 1786, 1844
NmuCI	GTSAC	1 cut(s)	1580
NruI	TCGCGA	1 cut(s)	2214
NsbI	TGCGCA	1 cut(s)	2140
NspI	RCATGY	2 cut(s)	2162, 2428
OliI	CACNNNNGTG	2 cut(s)	1495, 2030
PaeI	GCATGC	2 cut(s)	2162, 2428
PasI	CCCWGGG	1 cut(s)	1897
PciSI	GCTCTTC	2 cut(s)	151, 1919
PdmI	GAANNNNTTC	1 cut(s)	2451
PfeI	GAWTC	5 cut(s)	673, 714, 974, 1205, 2447
PflFI	GACNNNGTC	2 cut(s)	1707, 2348
PkrI	GCNGC	8 cut(s)	920, 1440, 1443, 1531, 1574, 1689, 1864, 1875
PleI	GAGTC	6 cut(s)	89, 520, 1242, 1287, 1401, 1640
PmaCI	CACGTG	2 cut(s)	1585, 1781
PmlI	CACGTG	2 cut(s)	1585, 1781
PpsI	GAGTC	6 cut(s)	89, 520, 1242, 1287, 1401, 1640
Ppu21I	YACGTR	2 cut(s)	1585, 1781
Psp6I	CCWGG	4 cut(s)	956, 1829, 1896, 2428
PspCI	CACGTG	2 cut(s)	1585, 1781
PspFI	CCCAGC	2 cut(s)	361, 1318
PspGI	CCWGG	4 cut(s)	956, 1829, 1896, 2428
PspN4I	GGNNCC	6 cut(s)	154, 1163, 1612, 1660, 1786, 1844
PspPI	GGNCC	4 cut(s)	332, 1289, 1611, 2196
PsuI	RGATCY	1 cut(s)	738
PsyI	GACNNNGTC	2 cut(s)	1707, 2348
PvuII	CAGCTG	1 cut(s)	2150
RruI	TCGCGA	1 cut(s)	2214
RseI	CAYNNNNRTG	7 cut(s)	83, 761, 1008, 1495, 1890, 1917, 2030
SacII	CCGCGG	1 cut(s)	2392
SalI	GTCGAC	1 cut(s)	161
SapI	GCTCTTC	2 cut(s)	151, 1919
SaqAI	TTAA	2 cut(s)	815, 1053
SatI	GCNGC	8 cut(s)	919, 1439, 1442, 1530, 1573, 1688, 1863, 1874
Sau96I	GGNCC	4 cut(s)	332, 1289, 1611, 2196
ScaI	AGTACT	1 cut(s)	1024
SchI	GAGTC	6 cut(s)	89, 521, 1242, 1288, 1401, 1640
ScrFI	CCNGG	8 cut(s)	91, 638, 958, 1038, 1046, 1831, 1898, 2430
SduI	GDGCHC	6 cut(s)	638, 1460, 1663, 1904, 1931, 1997
SfaNI	GCATC	7 cut(s)	374, 454, 553, 687, 1882, 2316, 2401
SfcI	CTRYAG	1 cut(s)	1311
Sfr303I	CCGCGG	1 cut(s)	2392
SgrBI	CCGCGG	1 cut(s)	2392
SinI	GGWCC	2 cut(s)	1289, 2196
SmiMI	CAYNNNNRTG	7 cut(s)	83, 761, 1008, 1495, 1890, 1917, 2030
SmlI	CTYRAG	2 cut(s)	1240, 2360
SmoI	CTYRAG	2 cut(s)	1240, 2360
SphI	GCATGC	2 cut(s)	2162, 2428
Sse9I	AATT	6 cut(s)	302, 591, 772, 962, 1848, 2292
SspI	AATATT	1 cut(s)	2066
SspMI	CTAG	3 cut(s)	1344, 2054, 2421
StyD4I	CCNGG	8 cut(s)	89, 636, 956, 1036, 1044, 1829, 1896, 2428
StyI	CCWWGG	2 cut(s)	1417, 1962
TaaI	ACNGT	7 cut(s)	180, 1027, 1378, 1709, 1916, 2089, 2318
TaiI	ACGT	6 cut(s)	1146, 1587, 1783, 2077, 2103, 2349
TaqI	TCGA	7 cut(s)	162, 681, 1251, 1602, 1683, 1985, 2238
TaqII	GACCGA	1 cut(s)	1568
TasI	AATT	6 cut(s)	302, 591, 772, 962, 1848, 2292
TatI	WGTACW	5 cut(s)	1022, 1131, 1587, 1736, 2103
TauI	GCSGC	5 cut(s)	921, 1441, 1444, 1532, 1575
TfiI	GAWTC	5 cut(s)	673, 714, 974, 1205, 2447
Tru1I	TTAA	2 cut(s)	815, 1053
Tru9I	TTAA	2 cut(s)	815, 1053
TseFI	GTSAC	1 cut(s)	1580
TseI	GCWGC	3 cut(s)	1687, 1862, 1873
Tsp45I	GTSAC	1 cut(s)	1580
TspGWI	ACGGA	4 cut(s)	1066, 1691, 2180, 2440
Tth111I	GACNNNGTC	2 cut(s)	1707, 2348
VpaK11BI	GGWCC	2 cut(s)	1289, 2196
XapI	RAATTY	4 cut(s)	302, 591, 962, 1848
XbaI	TCTAGA	1 cut(s)	2053
XceI	RCATGY	2 cut(s)	2162, 2428
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1827, 1853
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	1 cut(s)	2451
XspI	CTAG	3 cut(s)	1344, 2054, 2421
ZraI	GACGTC	1 cut(s)	2075
ZrmI	AGTACT	1 cut(s)	1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.