Rmu_sc0017773.1_g000001

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017773.1
Physical Location & Seq
Reverse (-)
892 .. 1838
947 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017773.1_g000001.1.cds

Sequence Viewer

Length: 828 bp
atgaaaaccgccactcaaaacttcaaacggttgaaagccatgtcatcacaaggggcccgcgagtttaggacagaaatcgagatgctctctcgacttcgtcaccgccatttagtgtctcttattagatattgtgctgatgaagatgagatgatcttggtgtatgattacatggcacgtgggacccttggtgaccatctctaccacactaataatctacctctttcgtgggaacaacggcttcaaatttgtatttgtgcggcgcgaggtttgcactatctacatacaggtactaagggtaccatcattcaccgagatgtgaagagcacaaacatattattggatgagaaatgggtggctaaagtttcagattttgggttgtcgaagaatggcacaatcaccctttccaagacccacattagcacaaaggtgaagggtagttttggatatcttgaccccgaatactatctacatcaacaattgattgagaagtctgatgtgtactcatttggcatgattttgtgcgagggtaaagttgcaatgagatgcttgcataaatttgtctccatgacaatgcgttgcttggatgataatgggatcaatcggccgtcaatgtacgatgttgtgagggaggttcaatttgcattgaagatgcaacaaaacaatggggactatattgatcgcattgaaatgacagttcaagataggattgcattgatcaaggacgatgaagggtcttgttctagtgagcaaagtagtggcgcgaacgaatccgtccaagggttgactggcgcaattttctccgagatcatcgatccggttgggagataa

Protein Analysis

275

Amino Acids

31.33

Weight (kDa)

7.13

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 296
AccB1I GGYRCC 1 cut(s) 296
AccII CGCG 3 cut(s) 60, 262, 761
AciI CCGC 4 cut(s) 9, 58, 103, 257
AclWI GGATC 2 cut(s) 602, 806
AcoI YGGCCR 1 cut(s) 602
AcsI RAATTY 2 cut(s) 243, 554
AcvI CACGTG 1 cut(s) 176
AfaI GTAC 4 cut(s) 289, 298, 500, 614
AfiI CCNNNNNNNGG 1 cut(s) 777
AgsI TTSAA 7 cut(s) 25, 34, 242, 635, 646, 686, 698
AleI CACNNNNGTG 1 cut(s) 425
Alw21I GWGCWC 1 cut(s) 326
Alw26I GTCTC 2 cut(s) 120, 565
AlwI GGATC 2 cut(s) 602, 806
AoxI GGCC 2 cut(s) 54, 602
ApaI GGGCCC 1 cut(s) 58
ApoI RAATTY 2 cut(s) 243, 554
Asp718I GGTACC 1 cut(s) 296
AspLEI GCGC 3 cut(s) 262, 761, 791
AspS9I GGNCC 3 cut(s) 54, 55, 180
AsuHPI GGTGA 5 cut(s) 92, 200, 299, 388, 439
AvaII GGWCC 1 cut(s) 180
BaeGI GKGCMC 1 cut(s) 58
BanI GGYRCC 1 cut(s) 296
BanII GRGCYC 1 cut(s) 58
BbrPI CACGTG 1 cut(s) 176
Bbv12I GWGCWC 1 cut(s) 326
BccI CCATC 2 cut(s) 201, 308
BceAI ACGGC 2 cut(s) 251, 589
BclI TGATCA 1 cut(s) 714
BcoDI GTCTC 2 cut(s) 120, 565
BfaI CTAG 1 cut(s) 741
BisI GCNGC 1 cut(s) 258
BlsI GCNGC 1 cut(s) 259
Bme18I GGWCC 1 cut(s) 180
BmgT120I GGNCC 3 cut(s) 54, 55, 180
BmiI GGNNCC 5 cut(s) 55, 56, 181, 182, 298
BmsI GCATC 3 cut(s) 72, 533, 639
BplI GAGNNNNNCTC 2 cut(s) 71, 103
Bsa29I ATCGAT 1 cut(s) 810
BsaAI YACGTR 1 cut(s) 176
BsaJI CCNNGG 2 cut(s) 184, 775
BsaWI WCCGGW 1 cut(s) 814
Bsc4I CCNNNNNNNGG 1 cut(s) 777
Bse1I ACTGG 1 cut(s) 790
Bse3DI GCAATG 1 cut(s) 543
BseCI ATCGAT 1 cut(s) 810
BseDI CCNNGG 2 cut(s) 184, 775
BseGI GGATG 2 cut(s) 346, 589
BseLI CCNNNNNNNGG 1 cut(s) 777
BseMI GCAATG 1 cut(s) 543
BseNI ACTGG 1 cut(s) 790
BseSI GKGCMC 1 cut(s) 58
BseX3I CGGCCG 1 cut(s) 602
Bsh1236I CGCG 3 cut(s) 60, 262, 761
Bsh1285I CGRYCG 1 cut(s) 605
BshFI GGCC 2 cut(s) 56, 604
BshNI GGYRCC 1 cut(s) 296
BshVI ATCGAT 1 cut(s) 810
BsiEI CGRYCG 1 cut(s) 605
BsiHKAI GWGCWC 1 cut(s) 326
BsiSI CCGG 1 cut(s) 815
BslFI GGGAC 2 cut(s) 193, 680
BslI CCNNNNNNNGG 1 cut(s) 777
BsmAI GTCTC 2 cut(s) 120, 565
BsmFI GGGAC 2 cut(s) 193, 680
BsnI GGCC 2 cut(s) 56, 604
Bsp120I GGGCCC 1 cut(s) 54
Bsp1286I GDGCHC 2 cut(s) 58, 326
Bsp143I GATC 6 cut(s) 150, 594, 676, 714, 804, 811
BspACI CCGC 4 cut(s) 9, 58, 103, 257
BspANI GGCC 2 cut(s) 56, 604
BspDI ATCGAT 1 cut(s) 810
BspFNI CGCG 3 cut(s) 60, 262, 761
BspLI GGNNCC 5 cut(s) 55, 56, 181, 182, 298
BspPI GGATC 2 cut(s) 602, 806
BspQI GCTCTTC 1 cut(s) 314
BspT107I GGYRCC 1 cut(s) 296
BsrDI GCAATG 1 cut(s) 543
BsrI ACTGG 1 cut(s) 790
BssECI CCNNGG 2 cut(s) 184, 775
BssMI GATC 6 cut(s) 150, 594, 676, 714, 804, 811
BssT1I CCWWGG 2 cut(s) 184, 775
Bst4CI ACNGT 2 cut(s) 30, 694
Bst6I CTCTTC 1 cut(s) 314
BstBAI YACGTR 1 cut(s) 176
BstC8I GCNNGC 2 cut(s) 58, 548
BstDEI CTNAG 1 cut(s) 291
BstEII GGTNACC 1 cut(s) 188
BstF5I GGATG 2 cut(s) 346, 589
BstFNI CGCG 3 cut(s) 60, 262, 761
BstHHI GCGC 3 cut(s) 262, 761, 791
BstKTI GATC 6 cut(s) 153, 597, 679, 717, 807, 814
BstMAI GTCTC 2 cut(s) 120, 565
BstMBI GATC 6 cut(s) 150, 594, 676, 714, 804, 811
BstMCI CGRYCG 1 cut(s) 605
BstMWI GCNNNNNNNGC 1 cut(s) 268
BstPI GGTNACC 1 cut(s) 188
BstSLI GKGCMC 1 cut(s) 58
BstUI CGCG 3 cut(s) 60, 262, 761
BstZI CGGCCG 1 cut(s) 602
Bsu15I ATCGAT 1 cut(s) 810
BsuRI GGCC 2 cut(s) 56, 604
BsuTUI ATCGAT 1 cut(s) 810
BtsCI GGATG 2 cut(s) 346, 589
Cac8I GCNNGC 2 cut(s) 58, 548
CfoI GCGC 3 cut(s) 262, 761, 791
Cfr13I GGNCC 3 cut(s) 54, 55, 180
ClaI ATCGAT 1 cut(s) 810
Csp6I GTAC 4 cut(s) 288, 297, 499, 613
CviAII CATG 4 cut(s) 40, 169, 511, 565
CviJI RGCY 5 cut(s) 38, 56, 238, 356, 604
CviKI_1 RGCY 5 cut(s) 38, 56, 238, 356, 604
CviQI GTAC 4 cut(s) 288, 297, 499, 613
DdeI CTNAG 1 cut(s) 291
DpnI GATC 6 cut(s) 152, 596, 678, 716, 806, 813
DpnII GATC 6 cut(s) 150, 594, 676, 714, 804, 811
EaeI YGGCCR 1 cut(s) 602
EagI CGGCCG 1 cut(s) 602
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
EclXI CGGCCG 1 cut(s) 602
Eco130I CCWWGG 2 cut(s) 184, 775
Eco24I GRGCYC 1 cut(s) 58
Eco32I GATATC 1 cut(s) 446
Eco47I GGWCC 1 cut(s) 180
Eco52I CGGCCG 1 cut(s) 602
Eco72I CACGTG 1 cut(s) 176
Eco91I GGTNACC 1 cut(s) 188
EcoO109I RGGNCCY 2 cut(s) 54, 180
EcoO65I GGTNACC 1 cut(s) 188
EcoRV GATATC 1 cut(s) 446
EcoT14I CCWWGG 2 cut(s) 184, 775
EcoT38I GRGCYC 1 cut(s) 58
ErhI CCWWGG 2 cut(s) 184, 775
FaeI CATG 4 cut(s) 43, 172, 514, 568
FaiI YATR 9 cut(s) 41, 162, 170, 282, 332, 512, 552, 566, 672
FaqI GGGAC 2 cut(s) 193, 680
FatI CATG 4 cut(s) 39, 168, 510, 564
FauI CCCGC 1 cut(s) 65
FbaI TGATCA 1 cut(s) 714
Fnu4HI GCNGC 1 cut(s) 258
FokI GGATG 2 cut(s) 353, 596
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 1 cut(s) 258
FspBI CTAG 1 cut(s) 741
GlaI GCGC 3 cut(s) 261, 760, 790
GluI GCNGC 1 cut(s) 258
HaeIII GGCC 2 cut(s) 56, 604
HapII CCGG 1 cut(s) 815
HhaI GCGC 3 cut(s) 262, 761, 791
Hin1II CATG 4 cut(s) 43, 172, 514, 568
Hin6I GCGC 3 cut(s) 260, 759, 789
HinP1I GCGC 3 cut(s) 260, 759, 789
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HinfI GANTC 1 cut(s) 767
HpaII CCGG 1 cut(s) 815
HphI GGTGA 5 cut(s) 92, 200, 299, 388, 439
Hpy166II GTNNAC 2 cut(s) 499, 783
Hpy188I TCNGA 3 cut(s) 367, 493, 802
Hpy188III TCNNGA 4 cut(s) 79, 90, 449, 698
Hpy8I GTNNAC 2 cut(s) 499, 783
HpyAV CCTTC 2 cut(s) 424, 722
HpyCH4III ACNGT 2 cut(s) 30, 694
HpyCH4IV ACGT 1 cut(s) 175
HpyCH4V TGCA 6 cut(s) 271, 536, 550, 641, 652, 710
HpyF10VI GCNNNNNNNGC 1 cut(s) 268
HpyF3I CTNAG 1 cut(s) 291
HpySE526I ACGT 1 cut(s) 175
Hsp92II CATG 4 cut(s) 43, 172, 514, 568
HspAI GCGC 3 cut(s) 260, 759, 789
KflI GGGWCCC 1 cut(s) 180
KpnI GGTACC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 714
Kzo9I GATC 6 cut(s) 150, 594, 676, 714, 804, 811
LguI GCTCTTC 1 cut(s) 314
LpnPI CCDG 2 cut(s) 270, 771
LweI GCATC 3 cut(s) 72, 533, 639
MaeI CTAG 1 cut(s) 741
MaeII ACGT 1 cut(s) 175
MaeIII GTNAC 2 cut(s) 98, 188
MalI GATC 6 cut(s) 152, 596, 678, 716, 806, 813
MboI GATC 6 cut(s) 150, 594, 676, 714, 804, 811
MboII GAAGA 4 cut(s) 152, 331, 394, 658
MfeI CAATTG 1 cut(s) 476
MhlI GDGCHC 2 cut(s) 58, 326
MluCI AATT 5 cut(s) 243, 476, 554, 635, 792
MnlI CCTC 5 cut(s) 228, 257, 517, 618, 622
MslI CAYNNNNRTG 4 cut(s) 312, 425, 569, 686
MspI CCGG 1 cut(s) 815
MunI CAATTG 1 cut(s) 476
MvnI CGCG 3 cut(s) 60, 262, 761
MwoI GCNNNNNNNGC 1 cut(s) 268
NdeII GATC 6 cut(s) 150, 594, 676, 714, 804, 811
NlaIII CATG 4 cut(s) 43, 172, 514, 568
NlaIV GGNNCC 5 cut(s) 55, 56, 181, 182, 298
NmuCI GTSAC 2 cut(s) 98, 188
OliI CACNNNNGTG 1 cut(s) 425
PciSI GCTCTTC 1 cut(s) 314
PfeI GAWTC 1 cut(s) 767
PflFI GACNNNGTC 1 cut(s) 96
PkrI GCNGC 1 cut(s) 259
PmaCI CACGTG 1 cut(s) 176
PmlI CACGTG 1 cut(s) 176
Ppu21I YACGTR 1 cut(s) 176
PpuMI RGGWCCY 1 cut(s) 180
Psp5II RGGWCCY 1 cut(s) 180
PspCI CACGTG 1 cut(s) 176
PspEI GGTNACC 1 cut(s) 188
PspN4I GGNNCC 5 cut(s) 55, 56, 181, 182, 298
PspOMI GGGCCC 1 cut(s) 54
PspPI GGNCC 3 cut(s) 54, 55, 180
PspPPI RGGWCCY 1 cut(s) 180
PsyI GACNNNGTC 1 cut(s) 96
RsaI GTAC 4 cut(s) 289, 298, 500, 614
RsaNI GTAC 4 cut(s) 288, 297, 499, 613
RseI CAYNNNNRTG 4 cut(s) 312, 425, 569, 686
SapI GCTCTTC 1 cut(s) 314
SatI GCNGC 1 cut(s) 258
Sau3AI GATC 6 cut(s) 150, 594, 676, 714, 804, 811
Sau96I GGNCC 3 cut(s) 54, 55, 180
SduI GDGCHC 2 cut(s) 58, 326
SetI ASST 6 cut(s) 178, 220, 268, 289, 429, 633
SfaNI GCATC 3 cut(s) 72, 533, 639
SinI GGWCC 1 cut(s) 180
SmiMI CAYNNNNRTG 4 cut(s) 312, 425, 569, 686
Sse9I AATT 5 cut(s) 243, 476, 554, 635, 792
SsiI CCGC 4 cut(s) 9, 58, 103, 257
SspMI CTAG 1 cut(s) 741
StyI CCWWGG 2 cut(s) 184, 775
TaaI ACNGT 2 cut(s) 30, 694
TaiI ACGT 1 cut(s) 178
TaqI TCGA 4 cut(s) 78, 91, 380, 810
TasI AATT 5 cut(s) 243, 476, 554, 635, 792
TatI WGTACW 1 cut(s) 498
TauI GCSGC 1 cut(s) 260
TfiI GAWTC 1 cut(s) 767
TseFI GTSAC 2 cut(s) 98, 188
Tsp45I GTSAC 2 cut(s) 98, 188
TspDTI ATGAA 3 cut(s) 17, 153, 741
TspGWI ACGGA 1 cut(s) 760
Tth111I GACNNNGTC 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 180
XapI RAATTY 2 cut(s) 243, 554
XcmI CCANNNNNNNNNTGG 1 cut(s) 782
XspI CTAG 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.