Prupe.3G251100_v2.0.a1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
24108867 .. 24112119
3253 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G251100.1

Sequence Viewer

Length: 2724 bp
ATGAAGAATCCAAGCAGCAAACACCTTCATAAATCAGTAACCATGAAACCCTTTCTCACTCCTCTGTTCCTTCCCCTGTTTCTGCACATCATCACCGTGCACGTGGCCGGTGATACTTCTCCTATCTACAATCCGGTGGACGATATCACCCTTCAATGTGGCTTTTCCGGCGACCAACTCAATCCAGCCGACACCAGAACTTGGACTGGAGACATCAACTCAAAGTTTTCCCCCTTTGAAAACCAAGCATCTGGCAGGCCCTCCATATCCACACAAGCACCTTCTTCCTCCTCTGTACCTTACAGCACCGCGAGGCTTTCTCTCTCTGAATTTACATACAGATTTCCAGTCACCACCGGCCAAAAGTTCATCCGTTTGTATTTCAACCCAGCTTCATATGGCCCTGACTTCGACCGATCCAAAGCCCTCTTCTCAGTCAAAGCCGGTGGCTTTACCCTTCTCAAAGACTTCAACTCTTCAGTCACTGCGGATGCTTCTGAGTCTGATACAATATACAGAGAATTCTGTCTCAACGTTGAGTCAGAACAGAGCTTGAACATCACTTTCATGCCAAGCAGAGCAACTGCAGATGCGTATGCGTTTATCAATGGAATTGAAATTGTGTCCATGCCCAACAATCTTTACTACACCTCTGCTCAAAATTCAGATGGAGTTAATTATATAGGCAGCGGAAACACATTTCGGATCGAAAATGACACTGCGCTGGAGATGATGTACCGATTCAACGTCGGTGGAAGATCACTGTTTTTCAATCTGGACACTGGTATGTACCGAAAGTGGTACGGCGAGCAAGATGAGAACAAGTACTTAGACTATTTAAGTTTAAAGTTTAGTGTTTTACCGCAAAACAGTAGCATTGAACTCAAGTTGACTGAAATAGCAAAGTACTGTGCTCCAGAAGAACTTTACCATACTGGCCGGTCAATGGGCAAAAACAAGACCATAAACAAGACCTATAATCTCACCTGGGAGTTCCCTGTCGATCCCAAGTTTTTTTACCTGCTTAGGCTTCATTTTTGTGAGTTTGAACCTGGTATTACCAAGCCCAGAGACCGACAGTTTCAGATCTACATCGCCAATCAAACAGCTGAAGAAGCCTGGGACATTTTCTCGCGGAGTAGTGGAAATGGAAGACCAATTTACAAGGACTACGTTGTGTTCATGCCTGCAGGCCCTGGAAGCCAGAAGACAGTTAATCTCTCTCTCGCACTGCAAGCAAACCCAAAAGATTTTATGACCAAGTTCAACGATGCAATCTTGAGTGGGCTCGAGATCTTCAAACTCAGTGACACTAGTCGGAATCTTGCCGGACCCAATCCCGACCCACCTCCTCTAACCCCACCAAAGATGTCTCCTAAAATTTCGAAGAAGAGTTCGACTTCTCTGATTGCCATCGTCGCCGGTGTAGTTTCCGGCGTACTTGTTTTAGTCTCCGTTGTCGGAATCTTCTTGGCTTTCAGGCGAGGAGGAAAAGTCAAGGACTCAAGCTCCAGCCACGGAACAAAGTGGGGTCCATTTTCTTTTTCGACGAACAAGTCAACCAAGAGTCGTAGCTCGTCTCTACCGTCGGATCTGTGTCGTTACTTCTCACTGGCTGAGATCAAAGCCGCCACCCAAAACTTCAATAGTGTTTTCATTATTGGCGTTGGTGGGTTCGGCCACGTGTACAAAGGGAACATCAACGTTGACGGTGGCGCCACCTCCGTTGCGATCAAACGGCTGAAACCAGAGTCATCGCAAGGGGCCCTTGAGTTCAAGACGGAGATCGAGATGCTTTCGCAGCTCCGCCACAACCATTTGGTGCCGCTCATCGGGTATTGTACGGATGAAGGCGAGATGATCTTGGTGTATGATTACATGGCACGTGGGACCCTCCGCGACCATCTCTATCACACTGATAATCCACCTCTTGCATGGGATCAAAGGCTTCAGATTTGTATTGGCGCGGCACGTGGGCTGCACTATCTTCACACTGGCGCGAAGTACACGATTATTCACCGTGATGTGAAGAGCACGAACATCTTATTGGACGAGAAATGGGTGGCTAAGGTTTCGGATTTCGGGCTCTCGAAAATGGGCTCCACCACCGTGTCCAAGACCCATATCAGCACGGTAGTGAAGGGTAGTTTCGGGTATTTGGACCCGGAATATTATCGTCGTCAACAGCTGACGGAGAAGTCTGATGTGTACTCATTTGGCGTAGTGTTGTGTGAGGTATTGTGCGCGAGGCCGGCTTTGATCCGTACAGTAGAGAAGAAGCAAATGAGCTTGGCTGAGTGGACCAAAGTTTGTCATCGGAATGGGAAAATTGATCAGATCATTGATCCAAGCTTGAGGGGTAAGATTGGAAATGCATGTTTGAATAAGTACGTTGAGATCGCGGTGAGTTGCATCCAAGATAATGGGATTGAACGGCCGTCGATGAATGACGTGGTGTGGGGGCTTGAGTTTGCATTGCAGCTTCAACAGAGCGGAGGAGGAGTTTTGAATTTGAGCGAGGAGAAGAAGGGTGAAGATGAGGAGTCATTAATGAATGCTGCAAGTGATGCAGGGTTTAGTTGTAGCTGGGAAGACTCGTCATCGGAGTCGAAGGTTAGTAGGGTGACCAAGAGTAGTAGTGATCACAATTCTTCAACCAACAAGTCTATGAAAGGAATGTCTGGGACAGTCTTCTCTGAGATTAACGATCCCAATGGAAGATGA

Protein Analysis

908

Amino Acids

100.68

Weight (kDa)

8.32

Isoelectric Point (pI)

46.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1555, 2197
Acc36I ACCTGC 1 cut(s) 1029
AccB1I GGYRCC 2 cut(s) 1715, 1822
AccB7I CCANNNNNTGG 1 cut(s) 201
AccBSI CCGCTC 2 cut(s) 1828, 2493
AccII CGCG 7 cut(s) 311, 1135, 1899, 1967, 2000, 2246, 2402
AclI AACGTT 2 cut(s) 534, 1704
AclWI GGATC 8 cut(s) 411, 713, 998, 1599, 1947, 2254, 2339, 2702
AcoI YGGCCR 5 cut(s) 105, 358, 937, 1678, 2435
AcsI RAATTY 5 cut(s) 329, 521, 661, 1380, 2509
AcuI CTGAAG 3 cut(s) 462, 1131, 1934
AcvI CACGTG 4 cut(s) 103, 1684, 1886, 1973
AcyI GRCGYC 1 cut(s) 1716
AfiI CCNNNNNNNGG 3 cut(s) 201, 946, 1832
AflIII ACRYGT 1 cut(s) 1683
AhlI ACTAGT 1 cut(s) 1313
AjiI CACGTC 1 cut(s) 2452
AjnI CCWGG 4 cut(s) 986, 1051, 1118, 1195
AjuI GAANNNNNNNTTGG 4 cut(s) 413, 445, 2030, 2062
AleI CACNNNNGTG 2 cut(s) 2108, 2135
Alw21I GWGCWC 3 cut(s) 102, 916, 2036
Alw26I GTCTC 6 cut(s) 204, 533, 1065, 1377, 1456, 1584
Alw44I GTGCAC 1 cut(s) 98
AlwI GGATC 8 cut(s) 411, 713, 998, 1599, 1947, 2254, 2339, 2702
AlwNI CAGNNNCTG 2 cut(s) 485, 1196
Ama87I CYCGRG 1 cut(s) 1289
ApaI GGGCCC 1 cut(s) 1768
ApaLI GTGCAC 1 cut(s) 98
ApeKI GCWGC 6 cut(s) 15, 687, 1801, 1978, 2479, 2558
ApoI RAATTY 5 cut(s) 329, 521, 661, 1380, 2509
AseI ATTAAT 1 cut(s) 2549
AspLEI GCGC 5 cut(s) 724, 1718, 1967, 2000, 2246
AsuC2I CCSGG 1 cut(s) 2165
AsuHPI GGTGA 9 cut(s) 85, 122, 139, 343, 976, 2009, 2416, 2543, 2635
AsuII TTCGAA 1 cut(s) 1385
AvaI CYCGRG 1 cut(s) 1289
AvaII GGWCC 5 cut(s) 1331, 1532, 1890, 2161, 2301
BaeGI GKGCMC 2 cut(s) 102, 1768
BanI GGYRCC 2 cut(s) 1715, 1822
BanII GRGCYC 4 cut(s) 1290, 1768, 2088, 2102
BbrPI CACGTG 4 cut(s) 103, 1684, 1886, 1973
BbsI GAAGAC 4 cut(s) 1159, 1214, 2598, 2683
Bbv12I GWGCWC 3 cut(s) 102, 916, 2036
BbvI GCAGC 6 cut(s) 27, 699, 1813, 1965, 2491, 2545
BccI CCATC 3 cut(s) 662, 1421, 1911
BceAI ACGGC 4 cut(s) 820, 1754, 2422, 2450
BciT130I CCWGG 4 cut(s) 988, 1053, 1120, 1197
BclI TGATCA 2 cut(s) 2332, 2641
BcnI CCSGG 1 cut(s) 2165
BcoDI GTCTC 6 cut(s) 204, 533, 1065, 1377, 1456, 1584
BcuI ACTAGT 1 cut(s) 1313
BfaI CTAG 1 cut(s) 1314
BfmI CTRYAG 2 cut(s) 585, 1188
BfoI RGCGCY 1 cut(s) 1719
BfuAI ACCTGC 1 cut(s) 1029
BglII AGATCT 2 cut(s) 1086, 1293
BisI GCNGC 9 cut(s) 16, 688, 1629, 1802, 1826, 1968, 1979, 2480, 2559
BlsI GCNGC 9 cut(s) 17, 689, 1630, 1803, 1827, 1969, 1980, 2481, 2560
BmcAI AGTACT 2 cut(s) 827, 908
Bme1390I CCNGG 5 cut(s) 988, 1053, 1120, 1197, 2165
Bme18I GGWCC 5 cut(s) 1331, 1532, 1890, 2161, 2301
BmeT110I CYCGRG 1 cut(s) 1289
BmgBI CACGTC 1 cut(s) 2452
BmrFI CCNGG 5 cut(s) 988, 1053, 1120, 1197, 2165
BmsI GCATC 7 cut(s) 257, 481, 580, 1261, 1782, 2421, 2557
BoxI GACNNNNGTC 1 cut(s) 1314
BpiI GAAGAC 4 cut(s) 1159, 1214, 2598, 2683
BplI GAGNNNNNCTC 2 cut(s) 304, 336
BpmI CTGGAG 4 cut(s) 228, 746, 900, 1495
Bpu10I CCTNAGC 2 cut(s) 1025, 2067
Bpu14I TTCGAA 1 cut(s) 1385
BpuEI CTTGAG 6 cut(s) 869, 1300, 1489, 1790, 2374, 2486
BpuMI CCSGG 1 cut(s) 2165
BsaAI YACGTR 4 cut(s) 103, 1684, 1886, 1973
BsaBI GATNNNNATC 2 cut(s) 1091, 1412
BsaHI GRCGYC 1 cut(s) 1716
BsaI GGTCTC 1 cut(s) 1065
BsaJI CCNNGG 4 cut(s) 987, 1119, 1195, 1516
BsaWI WCCGGW 1 cut(s) 133
BsaXI ACNNNNNCTCC 8 cut(s) 719, 749, 1479, 1493, 1509, 1523, 2487, 2517
Bsc4I CCNNNNNNNGG 3 cut(s) 201, 946, 1832
Bse118I RCCGGY 6 cut(s) 107, 356, 443, 939, 1421, 2251
Bse1I ACTGG 6 cut(s) 211, 347, 787, 940, 1617, 1999
Bse3DI GCAATG 1 cut(s) 2474
Bse8I GATNNNNATC 2 cut(s) 1091, 1412
BseBI CCWGG 4 cut(s) 988, 1053, 1120, 1197
BseDI CCNNGG 4 cut(s) 987, 1119, 1195, 1516
BseGI GGATG 4 cut(s) 369, 496, 1852, 2412
BseJI GATNNNNATC 2 cut(s) 1091, 1412
BseLI CCNNNNNNNGG 3 cut(s) 201, 946, 1832
BseMI GCAATG 1 cut(s) 2474
BseMII CTCAG 6 cut(s) 447, 489, 1318, 1608, 2286, 2688
BseNI ACTGG 6 cut(s) 211, 347, 787, 940, 1617, 1999
BseRI GAGGAG 8 cut(s) 51, 280, 1341, 1500, 2511, 2514, 2534, 2555
BseSI GKGCMC 2 cut(s) 102, 1768
BseX3I CGGCCG 1 cut(s) 2435
BseXI GCAGC 6 cut(s) 27, 699, 1813, 1965, 2491, 2545
BseYI CCCAGC 2 cut(s) 388, 2586
BsgI GTGCAG 2 cut(s) 68, 1964
Bsh1236I CGCG 7 cut(s) 311, 1135, 1899, 1967, 2000, 2246, 2402
Bsh1285I CGRYCG 2 cut(s) 415, 2438
BshNI GGYRCC 2 cut(s) 1715, 1822
BsiEI CGRYCG 2 cut(s) 415, 2438
BsiHKAI GWGCWC 3 cut(s) 102, 916, 2036
BsiHKCI CYCGRG 1 cut(s) 1289
BslFI GGGAC 3 cut(s) 1136, 1903, 2698
BslI CCNNNNNNNGG 3 cut(s) 201, 946, 1832
BsmAI GTCTC 6 cut(s) 204, 533, 1065, 1377, 1456, 1584
BsmBI CGTCTC 1 cut(s) 1584
BsmFI GGGAC 3 cut(s) 1136, 1903, 2698
BsmI GAATGC 1 cut(s) 2560
Bso31I GGTCTC 1 cut(s) 1065
BsoBI CYCGRG 1 cut(s) 1289
Bsp119I TTCGAA 1 cut(s) 1385
Bsp120I GGGCCC 1 cut(s) 1764
Bsp1286I GDGCHC 7 cut(s) 102, 916, 1290, 1768, 2036, 2088, 2102
Bsp1407I TGTACA 1 cut(s) 1686
BspCNI CTCAG 6 cut(s) 446, 490, 1317, 1609, 2287, 2689
BspFNI CGCG 7 cut(s) 311, 1135, 1899, 1967, 2000, 2246, 2402
BspMAI CTGCAG 2 cut(s) 589, 1192
BspMI ACCTGC 1 cut(s) 1029
BspPI GGATC 8 cut(s) 411, 713, 998, 1599, 1947, 2254, 2339, 2702
BspQI GCTCTTC 1 cut(s) 2024
BspT104I TTCGAA 1 cut(s) 1385
BspT107I GGYRCC 2 cut(s) 1715, 1822
BspTNI GGTCTC 1 cut(s) 1065
BsrBI CCGCTC 2 cut(s) 1828, 2493
BsrDI GCAATG 1 cut(s) 2474
BsrFI RCCGGY 6 cut(s) 107, 356, 443, 939, 1421, 2251
BsrGI TGTACA 1 cut(s) 1686
BsrI ACTGG 6 cut(s) 211, 347, 787, 940, 1617, 1999
BssAI RCCGGY 6 cut(s) 107, 356, 443, 939, 1421, 2251
BssECI CCNNGG 4 cut(s) 987, 1119, 1195, 1516
BssNI GRCGYC 1 cut(s) 1716
Bst2UI CCWGG 4 cut(s) 988, 1053, 1120, 1197
Bst6I CTCTTC 4 cut(s) 434, 481, 1385, 2024
BstACI GRCGYC 1 cut(s) 1716
BstAPI GCANNNNNTGC 1 cut(s) 2567
BstAUI TGTACA 1 cut(s) 1686
BstBAI YACGTR 4 cut(s) 103, 1684, 1886, 1973
BstBI TTCGAA 1 cut(s) 1385
BstC8I GCNNGC 6 cut(s) 257, 809, 1188, 1192, 1236, 2253
BstDEI CTNAG 9 cut(s) 433, 498, 829, 1025, 1304, 1617, 2067, 2295, 2697
BstDSI CCRYGG 1 cut(s) 1516
BstEII GGTNACC 1 cut(s) 2623
BstF5I GGATG 4 cut(s) 369, 496, 1852, 2412
BstFNI CGCG 7 cut(s) 311, 1135, 1899, 1967, 2000, 2246, 2402
BstH2I RGCGCY 1 cut(s) 1719
BstHHI GCGC 5 cut(s) 724, 1718, 1967, 2000, 2246
BstMAI GTCTC 6 cut(s) 204, 533, 1065, 1377, 1456, 1584
BstMCI CGRYCG 2 cut(s) 415, 2438
BstMWI GCNNNNNNNGC 8 cut(s) 168, 1115, 1200, 1235, 1418, 1801, 2252, 2567
BstNI CCWGG 4 cut(s) 988, 1053, 1120, 1197
BstNSI RCATGY 1 cut(s) 2379
BstPAI GACNNNNGTC 1 cut(s) 1314
BstPI GGTNACC 1 cut(s) 2623
BstSCI CCNGG 5 cut(s) 986, 1051, 1118, 1195, 2163
BstSFI CTRYAG 2 cut(s) 585, 1188
BstSLI GKGCMC 2 cut(s) 102, 1768
BstUI CGCG 7 cut(s) 311, 1135, 1899, 1967, 2000, 2246, 2402
BstV1I GCAGC 6 cut(s) 27, 699, 1813, 1965, 2491, 2545
BstV2I GAAGAC 4 cut(s) 1159, 1214, 2598, 2683
BstX2I RGATCY 3 cut(s) 1086, 1293, 1591
BstXI CCANNNNNNTGG 2 cut(s) 251, 2423
BstYI RGATCY 3 cut(s) 1086, 1293, 1591
BstZI CGGCCG 1 cut(s) 2435
BtgI CCRYGG 1 cut(s) 1516
BtgZI GCGATG 2 cut(s) 1078, 1740
BtrI CACGTC 1 cut(s) 2452
BtsCI GGATG 4 cut(s) 369, 496, 1852, 2412
BtsI GCAGTG 3 cut(s) 483, 717, 1229
BtsIMutI CAGTG 9 cut(s) 483, 717, 761, 780, 1229, 1312, 1610, 1914, 1992
BveI ACCTGC 1 cut(s) 1029
Cac8I GCNNGC 6 cut(s) 257, 809, 1188, 1192, 1236, 2253
CaiI CAGNNNCTG 2 cut(s) 485, 1196
CfoI GCGC 5 cut(s) 724, 1718, 1967, 2000, 2246
Cfr10I RCCGGY 6 cut(s) 107, 356, 443, 939, 1421, 2251
CsiI ACCWGGT 1 cut(s) 1051
CspCI CAANNNNNGTGG 6 cut(s) 427, 462, 733, 768, 1708, 1743
CviAII CATG 7 cut(s) 43, 568, 628, 1183, 1879, 1935, 2376
DdeI CTNAG 9 cut(s) 433, 498, 829, 1025, 1304, 1617, 2067, 2295, 2697
DinI GGCGCC 1 cut(s) 1717
DraI TTTAAA 1 cut(s) 846
DrdI GACNNNNNNGTC 2 cut(s) 1555, 2197
DseDI GACNNNNNNGTC 2 cut(s) 1555, 2197
EaeI YGGCCR 5 cut(s) 105, 358, 937, 1678, 2435
EagI CGGCCG 1 cut(s) 2435
Eam1104I CTCTTC 4 cut(s) 434, 481, 1385, 2024
EarI CTCTTC 4 cut(s) 434, 481, 1385, 2024
EciI GGCGGA 1 cut(s) 1796
EclXI CGGCCG 1 cut(s) 2435
Eco24I GRGCYC 4 cut(s) 1290, 1768, 2088, 2102
Eco31I GGTCTC 1 cut(s) 1065
Eco32I GATATC 1 cut(s) 145
Eco47I GGWCC 5 cut(s) 1331, 1532, 1890, 2161, 2301
Eco52I CGGCCG 1 cut(s) 2435
Eco57I CTGAAG 3 cut(s) 462, 1131, 1934
Eco72I CACGTG 4 cut(s) 103, 1684, 1886, 1973
Eco88I CYCGRG 1 cut(s) 1289
Eco91I GGTNACC 1 cut(s) 2623
EcoO109I RGGNCCY 5 cut(s) 258, 1193, 1764, 1765, 1890
EcoO65I GGTNACC 1 cut(s) 2623
EcoRI GAATTC 1 cut(s) 521
EcoRII CCWGG 4 cut(s) 986, 1051, 1118, 1195
EcoRV GATATC 1 cut(s) 145
EcoT22I ATGCAT 1 cut(s) 2377
EcoT38I GRGCYC 4 cut(s) 1290, 1768, 2088, 2102
EgeI GGCGCC 1 cut(s) 1717
EheI GGCGCC 1 cut(s) 1717
Esp3I CGTCTC 1 cut(s) 1584
FaeI CATG 7 cut(s) 46, 571, 631, 1186, 1882, 1938, 2379
FalI AAGNNNNNCTT 2 cut(s) 1752, 1784
FaqI GGGAC 3 cut(s) 1136, 1903, 2698
FatI CATG 7 cut(s) 42, 567, 627, 1182, 1878, 1934, 2375
FauNDI CATATG 1 cut(s) 397
FbaI TGATCA 2 cut(s) 2332, 2641
Fnu4HI GCNGC 9 cut(s) 16, 688, 1629, 1802, 1826, 1968, 1979, 2480, 2559
FokI GGATG 4 cut(s) 356, 503, 1859, 2399
FriOI GRGCYC 4 cut(s) 1290, 1768, 2088, 2102
Fsp4HI GCNGC 9 cut(s) 16, 688, 1629, 1802, 1826, 1968, 1979, 2480, 2559
FspBI CTAG 1 cut(s) 1314
GlaI GCGC 5 cut(s) 723, 1717, 1966, 1999, 2245
GluI GCNGC 9 cut(s) 16, 688, 1629, 1802, 1826, 1968, 1979, 2480, 2559
GsaI CCCAGC 2 cut(s) 392, 2590
GsuI CTGGAG 4 cut(s) 228, 746, 900, 1495
HaeII RGCGCY 1 cut(s) 1719
HhaI GCGC 5 cut(s) 724, 1718, 1967, 2000, 2246
Hin1I GRCGYC 1 cut(s) 1716
Hin1II CATG 7 cut(s) 46, 571, 631, 1186, 1882, 1938, 2379
Hin6I GCGC 5 cut(s) 722, 1716, 1965, 1998, 2244
HinP1I GCGC 5 cut(s) 722, 1716, 1965, 1998, 2244
HincII GTYRAC 4 cut(s) 891, 1560, 1708, 2183
HindII GTYRAC 4 cut(s) 891, 1560, 1708, 2183
HindIII AAGCTT 1 cut(s) 2350
HphI GGTGA 9 cut(s) 85, 122, 139, 343, 976, 2009, 2416, 2543, 2635
Hpy188III TCNNGA 8 cut(s) 776, 917, 1279, 1291, 1340, 1777, 1789, 2089
Hpy99I CGWCG 6 cut(s) 752, 1421, 1552, 1591, 2181, 2443
HpyAV CCTTC 9 cut(s) 35, 80, 161, 291, 467, 1844, 2134, 2521, 2605
HpyF10VI GCNNNNNNNGC 8 cut(s) 168, 1115, 1200, 1235, 1418, 1801, 2252, 2567
HpyF3I CTNAG 9 cut(s) 433, 498, 829, 1025, 1304, 1617, 2067, 2295, 2697
Hsp92I GRCGYC 1 cut(s) 1716
Hsp92II CATG 7 cut(s) 46, 571, 631, 1186, 1882, 1938, 2379
HspAI GCGC 5 cut(s) 722, 1716, 1965, 1998, 2244
KasI GGCGCC 1 cut(s) 1715
KflI GGGWCCC 1 cut(s) 1890
KroI GCCGGC 1 cut(s) 2251
KroNI GCCGGC 1 cut(s) 2253
Ksp22I TGATCA 2 cut(s) 2332, 2641
LguI GCTCTTC 1 cut(s) 2024
LmnI GCTCC 4 cut(s) 919, 1514, 1809, 2105
Lsp1109I GCAGC 6 cut(s) 27, 699, 1813, 1965, 2491, 2545
LweI GCATC 7 cut(s) 257, 481, 580, 1261, 1782, 2421, 2557
MabI ACCWGGT 1 cut(s) 1051
MaeI CTAG 1 cut(s) 1314
MaeIII GTNAC 6 cut(s) 37, 349, 481, 1307, 1601, 2623
MbiI CCGCTC 2 cut(s) 1828, 2493
MflI RGATCY 3 cut(s) 1086, 1293, 1591
MhlI GDGCHC 7 cut(s) 102, 916, 1290, 1768, 2036, 2088, 2102
Mly113I GGCGCC 1 cut(s) 1716
MlyI GAGTC 8 cut(s) 509, 548, 1496, 1576, 1760, 2552, 2588, 2615
MmeI TCCRAC 3 cut(s) 1298, 1441, 1569
Mph1103I ATGCAT 1 cut(s) 2377
MroNI GCCGGC 1 cut(s) 2251
MseI TTAA 6 cut(s) 675, 839, 845, 1215, 2549, 2703
MslI CAYNNNNRTG 8 cut(s) 95, 566, 785, 1038, 2022, 2108, 2135, 2319
MspA1I CMGCKG 3 cut(s) 690, 1109, 2188
MspR9I CCNGG 5 cut(s) 988, 1053, 1120, 1197, 2165
Mva1269I GAATGC 1 cut(s) 2560
MvaI CCWGG 4 cut(s) 988, 1053, 1120, 1197
MvnI CGCG 7 cut(s) 311, 1135, 1899, 1967, 2000, 2246, 2402
MwoI GCNNNNNNNGC 8 cut(s) 168, 1115, 1200, 1235, 1418, 1801, 2252, 2567
NaeI GCCGGC 1 cut(s) 2253
NarI GGCGCC 1 cut(s) 1716
NciI CCSGG 1 cut(s) 2165
NdeI CATATG 1 cut(s) 397
NgoMIV GCCGGC 1 cut(s) 2251
NlaIII CATG 7 cut(s) 46, 571, 631, 1186, 1882, 1938, 2379
NmuCI GTSAC 4 cut(s) 349, 481, 1307, 2623
NsiI ATGCAT 1 cut(s) 2377
NspI RCATGY 1 cut(s) 2379
NspV TTCGAA 1 cut(s) 1385
OliI CACNNNNGTG 2 cut(s) 2108, 2135
PaeR7I CTCGAG 1 cut(s) 1289
PciSI GCTCTTC 1 cut(s) 2024
PcsI WCGNNNNNNNCGW 1 cut(s) 1583
PctI GAATGC 1 cut(s) 2560
PdiI GCCGGC 1 cut(s) 2253
PfeI GAWTC 4 cut(s) 7, 741, 1321, 1464
PflMI CCANNNNNTGG 1 cut(s) 201
PkrI GCNGC 9 cut(s) 17, 689, 1630, 1803, 1827, 1969, 1980, 2481, 2560
PleI GAGTC 8 cut(s) 508, 547, 1496, 1575, 1759, 2551, 2588, 2614
PluTI GGCGCC 1 cut(s) 1719
PmaCI CACGTG 4 cut(s) 103, 1684, 1886, 1973
PmlI CACGTG 4 cut(s) 103, 1684, 1886, 1973
PpsI GAGTC 8 cut(s) 508, 547, 1496, 1575, 1759, 2551, 2588, 2614
Ppu21I YACGTR 4 cut(s) 103, 1684, 1886, 1973
PpuMI RGGWCCY 1 cut(s) 1890
PshAI GACNNNNGTC 1 cut(s) 1314
PshBI ATTAAT 1 cut(s) 2549
Psp1406I AACGTT 2 cut(s) 534, 1704
Psp5II RGGWCCY 1 cut(s) 1890
Psp6I CCWGG 4 cut(s) 986, 1051, 1118, 1195
PspCI CACGTG 4 cut(s) 103, 1684, 1886, 1973
PspEI GGTNACC 1 cut(s) 2623
PspFI CCCAGC 2 cut(s) 388, 2586
PspGI CCWGG 4 cut(s) 986, 1051, 1118, 1195
PspOMI GGGCCC 1 cut(s) 1764
PspPPI RGGWCCY 1 cut(s) 1890
PstI CTGCAG 2 cut(s) 589, 1192
PstNI CAGNNNCTG 2 cut(s) 485, 1196
PsuI RGATCY 3 cut(s) 1086, 1293, 1591
PvuII CAGCTG 2 cut(s) 1109, 2188
RseI CAYNNNNRTG 8 cut(s) 95, 566, 785, 1038, 2022, 2108, 2135, 2319
SapI GCTCTTC 1 cut(s) 2024
SaqAI TTAA 6 cut(s) 675, 839, 845, 1215, 2549, 2703
SatI GCNGC 9 cut(s) 16, 688, 1629, 1802, 1826, 1968, 1979, 2480, 2559
SbfI CCTGCAGG 1 cut(s) 1192
ScaI AGTACT 2 cut(s) 827, 908
SchI GAGTC 8 cut(s) 509, 548, 1496, 1576, 1760, 2552, 2588, 2615
ScrFI CCNGG 5 cut(s) 988, 1053, 1120, 1197, 2165
SdaI CCTGCAGG 1 cut(s) 1192
SduI GDGCHC 7 cut(s) 102, 916, 1290, 1768, 2036, 2088, 2102
SexAI ACCWGGT 1 cut(s) 1051
SfaNI GCATC 7 cut(s) 257, 481, 580, 1261, 1782, 2421, 2557
SfcI CTRYAG 2 cut(s) 585, 1188
SfoI GGCGCC 1 cut(s) 1717
Sfr274I CTCGAG 1 cut(s) 1289
SfuI TTCGAA 1 cut(s) 1385
SgrAI CRCCGGYG 1 cut(s) 1421
SinI GGWCC 5 cut(s) 1331, 1532, 1890, 2161, 2301
SlaI CTCGAG 1 cut(s) 1289
SmiMI CAYNNNNRTG 8 cut(s) 95, 566, 785, 1038, 2022, 2108, 2135, 2319
SmlI CTYRAG 7 cut(s) 884, 1279, 1289, 1504, 1769, 2353, 2465
SmoI CTYRAG 7 cut(s) 884, 1279, 1289, 1504, 1769, 2353, 2465
SpeI ACTAGT 1 cut(s) 1313
Sse8387I CCTGCAGG 1 cut(s) 1192
SspDI GGCGCC 1 cut(s) 1715
SspI AATATT 1 cut(s) 2171
SspMI CTAG 1 cut(s) 1314
StyD4I CCNGG 5 cut(s) 986, 1051, 1118, 1195, 2163
TaqII GACCGA 2 cut(s) 429, 1089
TatI WGTACW 5 cut(s) 825, 906, 1686, 2004, 2208
TauI GCSGC 3 cut(s) 1631, 1828, 1970
TfiI GAWTC 4 cut(s) 7, 741, 1321, 1464
Tru1I TTAA 6 cut(s) 675, 839, 845, 1215, 2549, 2703
Tru9I TTAA 6 cut(s) 675, 839, 845, 1215, 2549, 2703
TscAI CASTG 9 cut(s) 490, 724, 768, 787, 1236, 1312, 1617, 1921, 1999
TseFI GTSAC 4 cut(s) 349, 481, 1307, 2623
TseI GCWGC 6 cut(s) 15, 687, 1801, 1978, 2479, 2558
Tsp45I GTSAC 4 cut(s) 349, 481, 1307, 2623
TspGWI ACGGA 8 cut(s) 362, 1444, 1533, 1714, 1796, 1859, 2207, 2252
TspRI CASTG 9 cut(s) 490, 724, 768, 787, 1236, 1312, 1617, 1921, 1999
Van91I CCANNNNNTGG 1 cut(s) 201
VneI GTGCAC 1 cut(s) 98
VpaK11BI GGWCC 5 cut(s) 1331, 1532, 1890, 2161, 2301
VspI ATTAAT 1 cut(s) 2549
XapI RAATTY 5 cut(s) 329, 521, 661, 1380, 2509
XceI RCATGY 1 cut(s) 2379
XcmI CCANNNNNNNNNTGG 1 cut(s) 1932
XhoI CTCGAG 1 cut(s) 1289
XspI CTAG 1 cut(s) 1314
ZrmI AGTACT 2 cut(s) 827, 908
Zsp2I ATGCAT 1 cut(s) 2377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.