pycom03g05070

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
3941637 .. 3942414
778 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g05070.2

Sequence Viewer

Length: 660 bp
ATGATTACATGGCACGTGGCACTCTCGGTGACCATCTGTATCGCACTGGTAACCTTAAACCTCTTCCTTGGGAACAACGACTCCAAATTTGTATTGGCGCAGCATGAGGGTTGCACTACCTTCACAGTGGTGCCAAGGGCTCCATTATTCACCGTGATGTTAAGAGCACAAATATTTTATTGGATGAGAAAATGGTGGCCAAGGTTTCAGATTTCGGGTAGTTTCGGGTATCTAGATCCGGATTACTTCCAACATCAACAGTTGACTGAGAAGTCTGATGTGTACTCATTTGGAGTGGTTTTGTGGGAGGTATTGTGTGCGAGGCCAGCTTTGCTGCATACGGTGGAAACTAGGCAAATCAGCCTCGCTGAGTGGGGTCAGATTGAAGTCGAGTGCTTGAACAAGTTCGTTGAGATTGCTATAAGTTGCTTACATGATAAGGGAGTCGAACGACCGTCGATGAATGATGTTGTGAGGGGCCTTGAGTTTGCACTGCAGCTTCATCAAAAGAGCATTGGAAGTAAGGGTGAAAATGGGGTTGCCCTTATCAATGACAGCGGCAACAAAACCAGTAGTACCGAGCAAAGTTGTGCTACCAATGAAACCAAACAATATATATCTGTGACAATCTTCTCTGAGATCGACGAAATGAATGGATGA

Protein Analysis

220

Amino Acids

24.77

Weight (kDa)

5.5

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 271
AccB1I GGYRCC 1 cut(s) 130
AccIII TCCGGA 1 cut(s) 238
AciI CCGC 1 cut(s) 558
AclWI GGATC 1 cut(s) 230
AcoI YGGCCR 1 cut(s) 197
AcsI RAATTY 1 cut(s) 86
AcvI CACGTG 1 cut(s) 16
AfaI GTAC 2 cut(s) 284, 577
AgsI TTSAA 2 cut(s) 386, 400
AleI CACNNNNGTG 1 cut(s) 128
AloI GAACNNNNNNTCC 2 cut(s) 65, 97
AluBI AGCT 2 cut(s) 329, 499
AluI AGCT 2 cut(s) 329, 499
Alw21I GWGCWC 1 cut(s) 169
AlwI GGATC 1 cut(s) 230
Aor13HI TCCGGA 1 cut(s) 238
AoxI GGCC 3 cut(s) 197, 323, 478
ApeKI GCWGC 3 cut(s) 100, 334, 496
ApoI RAATTY 1 cut(s) 86
ArsI GACNNNNNNTTYG 2 cut(s) 71, 103
Asp700I GAANNNNTTC 1 cut(s) 404
AspLEI GCGC 1 cut(s) 100
AspS9I GGNCC 1 cut(s) 478
AsuHPI GGTGA 3 cut(s) 40, 142, 539
BalI TGGCCA 1 cut(s) 199
BanI GGYRCC 1 cut(s) 130
BanII GRGCYC 1 cut(s) 142
BbrPI CACGTG 1 cut(s) 16
Bbv12I GWGCWC 1 cut(s) 169
BbvI GCAGC 3 cut(s) 112, 321, 508
BccI CCATC 1 cut(s) 41
BfaI CTAG 2 cut(s) 233, 351
BfmI CTRYAG 1 cut(s) 494
BisI GCNGC 4 cut(s) 101, 335, 497, 559
BlsI GCNGC 4 cut(s) 102, 336, 498, 560
BmgT120I GGNCC 1 cut(s) 478
BmiI GGNNCC 3 cut(s) 132, 141, 479
BpuEI CTTGAG 1 cut(s) 503
BsaAI YACGTR 1 cut(s) 16
BsaJI CCNNGG 3 cut(s) 67, 134, 200
BsaWI WCCGGW 1 cut(s) 238
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 299, 329
Bse1I ACTGG 2 cut(s) 51, 570
BseAI TCCGGA 1 cut(s) 238
BseDI CCNNGG 3 cut(s) 67, 134, 200
BseGI GGATG 1 cut(s) 189
BseMII CTCAG 3 cut(s) 258, 360, 627
BseNI ACTGG 2 cut(s) 51, 570
BseXI GCAGC 3 cut(s) 112, 321, 508
Bsh1285I CGRYCG 1 cut(s) 455
BshFI GGCC 3 cut(s) 199, 325, 480
BshNI GGYRCC 1 cut(s) 130
BsiEI CGRYCG 1 cut(s) 455
BsiHKAI GWGCWC 1 cut(s) 169
BsiSI CCGG 1 cut(s) 239
BsnI GGCC 3 cut(s) 199, 325, 480
Bsp1286I GDGCHC 2 cut(s) 142, 169
Bsp13I TCCGGA 1 cut(s) 238
Bsp143I GATC 2 cut(s) 235, 639
BspACI CCGC 1 cut(s) 558
BspANI GGCC 3 cut(s) 199, 325, 480
BspCNI CTCAG 3 cut(s) 259, 361, 628
BspEI TCCGGA 1 cut(s) 238
BspLI GGNNCC 3 cut(s) 132, 141, 479
BspMAI CTGCAG 1 cut(s) 498
BspPI GGATC 1 cut(s) 230
BspT107I GGYRCC 1 cut(s) 130
BsrI ACTGG 2 cut(s) 51, 570
BssECI CCNNGG 3 cut(s) 67, 134, 200
BssMI GATC 2 cut(s) 235, 639
BssT1I CCWWGG 3 cut(s) 67, 134, 200
Bst4CI ACNGT 5 cut(s) 127, 154, 261, 343, 456
Bst6I CTCTTC 1 cut(s) 68
BstBAI YACGTR 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 327
BstDEI CTNAG 3 cut(s) 267, 369, 636
BstEII GGTNACC 2 cut(s) 28, 49
BstF5I GGATG 1 cut(s) 189
BstHHI GCGC 1 cut(s) 100
BstKTI GATC 2 cut(s) 238, 642
BstMBI GATC 2 cut(s) 235, 639
BstMCI CGRYCG 1 cut(s) 455
BstMWI GCNNNNNNNGC 2 cut(s) 326, 331
BstPI GGTNACC 2 cut(s) 28, 49
BstSFI CTRYAG 1 cut(s) 494
BstV1I GCAGC 3 cut(s) 112, 321, 508
BstX2I RGATCY 1 cut(s) 235
BstYI RGATCY 1 cut(s) 235
BsuRI GGCC 3 cut(s) 199, 325, 480
BtsCI GGATG 1 cut(s) 189
BtsI GCAGTG 1 cut(s) 491
BtsIMutI CAGTG 3 cut(s) 44, 132, 491
Cac8I GCNNGC 1 cut(s) 327
CfoI GCGC 1 cut(s) 100
Cfr13I GGNCC 1 cut(s) 478
Csp6I GTAC 2 cut(s) 283, 576
CviAII CATG 3 cut(s) 9, 104, 434
CviJI RGCY 7 cut(s) 140, 199, 325, 329, 363, 480, 499
CviKI_1 RGCY 7 cut(s) 140, 199, 325, 329, 363, 480, 499
CviQI GTAC 2 cut(s) 283, 576
DdeI CTNAG 3 cut(s) 267, 369, 636
DpnI GATC 2 cut(s) 237, 641
DpnII GATC 2 cut(s) 235, 639
DrdI GACNNNNNNGTC 1 cut(s) 271
DseDI GACNNNNNNGTC 1 cut(s) 271
EaeI YGGCCR 1 cut(s) 197
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
Eco130I CCWWGG 3 cut(s) 67, 134, 200
Eco24I GRGCYC 1 cut(s) 142
Eco72I CACGTG 1 cut(s) 16
Eco91I GGTNACC 2 cut(s) 28, 49
EcoO109I RGGNCCY 1 cut(s) 478
EcoO65I GGTNACC 2 cut(s) 28, 49
EcoT14I CCWWGG 3 cut(s) 67, 134, 200
EcoT38I GRGCYC 1 cut(s) 142
ErhI CCWWGG 3 cut(s) 67, 134, 200
FaeI CATG 3 cut(s) 12, 107, 437
FaiI YATR 7 cut(s) 10, 105, 339, 422, 435, 615, 617
FatI CATG 3 cut(s) 8, 103, 433
Fnu4HI GCNGC 4 cut(s) 101, 335, 497, 559
FokI GGATG 1 cut(s) 196
FriOI GRGCYC 1 cut(s) 142
Fsp4HI GCNGC 4 cut(s) 101, 335, 497, 559
FspBI CTAG 2 cut(s) 233, 351
GlaI GCGC 1 cut(s) 99
GluI GCNGC 4 cut(s) 101, 335, 497, 559
HaeIII GGCC 3 cut(s) 199, 325, 480
HapII CCGG 1 cut(s) 239
HhaI GCGC 1 cut(s) 100
Hin1II CATG 3 cut(s) 12, 107, 437
Hin6I GCGC 1 cut(s) 98
HinP1I GCGC 1 cut(s) 98
HincII GTYRAC 1 cut(s) 264
HindII GTYRAC 1 cut(s) 264
HinfI GANTC 2 cut(s) 80, 444
HpaII CCGG 1 cut(s) 239
HphI GGTGA 3 cut(s) 40, 142, 539
Hpy166II GTNNAC 2 cut(s) 264, 283
Hpy188I TCNGA 4 cut(s) 210, 277, 381, 637
Hpy188III TCNNGA 2 cut(s) 233, 239
Hpy8I GTNNAC 2 cut(s) 264, 283
Hpy99I CGWCG 2 cut(s) 460, 647
HpyAV CCTTC 1 cut(s) 130
HpyCH4III ACNGT 5 cut(s) 127, 154, 261, 343, 456
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 4 cut(s) 114, 337, 491, 496
HpyF10VI GCNNNNNNNGC 2 cut(s) 326, 331
HpyF3I CTNAG 3 cut(s) 267, 369, 636
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 3 cut(s) 12, 107, 437
HspAI GCGC 1 cut(s) 98
Kpn2I TCCGGA 1 cut(s) 238
Kzo9I GATC 2 cut(s) 235, 639
LmnI GCTCC 1 cut(s) 145
LpnPI CCDG 4 cut(s) 32, 252, 339, 583
Lsp1109I GCAGC 3 cut(s) 112, 321, 508
MaeI CTAG 2 cut(s) 233, 351
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 3 cut(s) 28, 49, 622
MalI GATC 2 cut(s) 237, 641
MboI GATC 2 cut(s) 235, 639
MboII GAAGA 2 cut(s) 55, 622
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 2 cut(s) 142, 169
MlsI TGGCCA 1 cut(s) 199
MluCI AATT 1 cut(s) 86
MluNI TGGCCA 1 cut(s) 199
MlyI GAGTC 2 cut(s) 74, 453
MmeI TCCRAC 1 cut(s) 274
MnlI CCTC 6 cut(s) 71, 100, 301, 315, 374, 468
Mox20I TGGCCA 1 cut(s) 199
MroI TCCGGA 1 cut(s) 238
MroXI GAANNNNTTC 1 cut(s) 404
MscI TGGCCA 1 cut(s) 199
MseI TTAA 2 cut(s) 56, 161
MslI CAYNNNNRTG 2 cut(s) 128, 155
Msp20I TGGCCA 1 cut(s) 199
MspA1I CMGCKG 1 cut(s) 558
MspI CCGG 1 cut(s) 239
MwoI GCNNNNNNNGC 2 cut(s) 326, 331
NdeII GATC 2 cut(s) 235, 639
NlaIII CATG 3 cut(s) 12, 107, 437
NlaIV GGNNCC 3 cut(s) 132, 141, 479
NmuCI GTSAC 2 cut(s) 28, 622
OliI CACNNNNGTG 1 cut(s) 128
PdmI GAANNNNTTC 1 cut(s) 404
PkrI GCNGC 4 cut(s) 102, 336, 498, 560
PleI GAGTC 2 cut(s) 74, 452
PmaCI CACGTG 1 cut(s) 16
PmlI CACGTG 1 cut(s) 16
PpsI GAGTC 2 cut(s) 74, 452
Ppu21I YACGTR 1 cut(s) 16
PspCI CACGTG 1 cut(s) 16
PspEI GGTNACC 2 cut(s) 28, 49
PspN4I GGNNCC 3 cut(s) 132, 141, 479
PspPI GGNCC 1 cut(s) 478
PstI CTGCAG 1 cut(s) 498
PsuI RGATCY 1 cut(s) 235
RsaI GTAC 2 cut(s) 284, 577
RsaNI GTAC 2 cut(s) 283, 576
RseI CAYNNNNRTG 2 cut(s) 128, 155
SaqAI TTAA 2 cut(s) 56, 161
SatI GCNGC 4 cut(s) 101, 335, 497, 559
Sau3AI GATC 2 cut(s) 235, 639
Sau96I GGNCC 1 cut(s) 478
SchI GAGTC 2 cut(s) 74, 453
SduI GDGCHC 2 cut(s) 142, 169
SetI ASST 8 cut(s) 18, 56, 63, 122, 206, 312, 331, 501
SfcI CTRYAG 1 cut(s) 494
SmiMI CAYNNNNRTG 2 cut(s) 128, 155
SmlI CTYRAG 1 cut(s) 482
SmoI CTYRAG 1 cut(s) 482
Sse9I AATT 1 cut(s) 86
SsiI CCGC 1 cut(s) 558
SspI AATATT 1 cut(s) 174
SspMI CTAG 2 cut(s) 233, 351
StyI CCWWGG 3 cut(s) 67, 134, 200
TaaI ACNGT 5 cut(s) 127, 154, 261, 343, 456
TaiI ACGT 1 cut(s) 18
TaqI TCGA 4 cut(s) 390, 447, 458, 642
TasI AATT 1 cut(s) 86
TatI WGTACW 1 cut(s) 282
TauI GCSGC 1 cut(s) 561
Tru1I TTAA 2 cut(s) 56, 161
Tru9I TTAA 2 cut(s) 56, 161
TscAI CASTG 3 cut(s) 51, 132, 498
TseFI GTSAC 2 cut(s) 28, 622
TseI GCWGC 3 cut(s) 100, 334, 496
Tsp45I GTSAC 2 cut(s) 28, 622
TspDTI ATGAA 3 cut(s) 476, 491, 615
TspRI CASTG 3 cut(s) 51, 132, 498
XapI RAATTY 1 cut(s) 86
XbaI TCTAGA 1 cut(s) 232
XcmI CCANNNNNNNNNTGG 1 cut(s) 91
XmnI GAANNNNTTC 1 cut(s) 404
XspI CTAG 2 cut(s) 233, 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.