Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

35497654 .. 35500530

Gene Structure 2877 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g46570.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGAAACTCATTCTCGCTCCTCTTTACCCTTCCAGCTTGTTTCTACTTTTCGTCAGCCTACTGGTGGCCGGACAGCCCTACACTCCGACCGATGAGATCAACCTTAACTGTGGCTCATCCGACGACGTGGTCTATGAATCTCAAACGTGGAACGGCGATATCAATTCCAAGCTTTCCCCTATAGAAGTTGGTAGCGCGTCCAAGGTTATGGATGCGCCACGGTCGTCCTCAACGGCCGGCCAAGTACCGTACACAACAGCACGGCTTTCTCGCTCAGAATTCACTTACCGGATTCCCGTCAGTCCGGGTCAGAAGTTCATCCGCTTGTATTTCTACCCAGCTTCATACAAAGCCGTCAACGCGAACTTCGACCGCTCGAAATCACTCTTCTCTGTCAAACTCGGTGGCTATAACTACACCTTCCTCAAGGACTTCAACGCTTCTGTCCAGGCAGATGCAGATTATTTCGAGACGATGATCAGAGAATTCTGTATTAACATTGATCCGGAAAGACACATCTTGAACATCACATTCACTCCTAGCAATGATGGATACGCTTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTTTCTTTACTACACTGCACTCCAAGACGATGGGCCGAAAGCCGTCACCGGAAACCGGTACCCTGTGGAAAACAACACCGCTCTGGAGATGATGTACCGAATCAACGTCGGTGGAGGCGTGCTCTCACCGAGTGAAGACACCGGCATGTATCGAACCTGGGATGCAACTGACGAGATGTACTTAGATAAGTCAAGTAGAGAGTTCAGTATTGTACCACATGTCAATAATGTTCATCTCAAATTTGGGAATATCTCTAACTACACTGCGCCGGAAGAGGTCTATAAAACCGGCCGGTCAATGGGGCTGAACAAAACAATCAACAAAAGCTACAATCTCACATGGGTATTTGGAGTACATCCACAATTTTCTTACCTAGTGAGGCTTCATTTTTGTGAGATTGTACCGTATATTACGATGGAGGGAGGTCGTAGGTTTCAGATTTTTATAGCCAATGAAACAGCAGAACGGGGAGCGGACATAATCCAGTGGAGTGGAGGAAATGGGGTTCCGGTATATAAAGACTACATTGTGTTCGTGCCAAGAGTTCCTAACACAAAGACAGATTTAGTTGAATTCTCTGTTGCACTCCAAGCAGGCGAAGATTCTACAACTGGATACAACGATGCTATCTTGAATGGGGTCGAAATCTTCAAATTGAATGACACAGACGGCAATCTCGCCGGACCTAATCCCGACCCACGGCCGGAGGACAAACGAAAAGTGAACCCGGTAAACCCTAGAGAATCGAAGAAGAAGTCGATGACAATGCTAGCTATTCTTGCCGGTGTACTTTCGGTGTTTCTTGTTCTTTCCGTCGTAGGGTTTTTACTTTTCAGGCGTAGTAGAAAACCTAAGGGCTCCAACTCTAGCAAAGCAACAAAATGGGGGCCGTTTTCTTTTTCCACGACCAAGTCCACCAAGTCTCGCGGCTCATCCCTACCGTCGGATTTGTGTCGCCACTTTTCACTGGCGGAGATCAAAGCCGCCACACAAAACTTCAACCATGATTTCATAATCGGCGTCGGCGGGTTTGGTAACGTCTACAAAGGCTACATCGATGATGGCTCTATACCGGTGGCGATCAAACGCCTCAAACCAGAGTCGTCACAAGGTGCACACGAGTTCAAGACCGAGATCGAGATGCTGTCCCAACTTTGCCATCTTCATTTGGTGCCCCTCGTCGGATATTGTACGGACAACGGTGAGATGATATTAGTGTATGACTACATGGAAAATGGGACGCTACGTGATCATTTGTACAACACCGAAAATAAACCACCTCTTGCATGGGAGCAACGCCTCCAAATTTGCATCGGCGCGGCGCGTGGGCTGCACTACCTTCACACGGGGGCCAAGTGCATGATCATCCACCGTGACGTGAAGAGCACAAATATCTTGTTGGATGAGAAATGGGTGGCCAAGGTTTCCGACTTTGGATTGTCCAAAATGGGCTCCACCACCATGTCCAAAACTCACATCAGCACAATGGTGAAGGGTAGTTTCGGGTATCTTGACCCAGAGTACTACAGACGTCAACAGTTGACTGAGAAGTCGGATGTTTACTCTTTTGGAGTTGTGTTGTGTGAGGTTCTGTGTGCAAGGCCAGCTCTGATACGAACGGTGGAGAAGAAGCAAATGAGCCTAGCTGAATGGACTAAGAGTTGTCATCGAAACGGCTCGATCTATCAAATCATTGATCCAAATCTAAGGGGAAAGATTGCAGCTACATGTCTGAACAAGTTCGTTGAGCTTGCCGTGAGTTGTATGAACGATAATGGAAACGAGCGGCCATCGATGAATGACGTAGTTTGGGGGCTTGAGTTTGCATTGCAGCTTCAGCAGAGTGCAGAAGTATTTTTAGACGTGGATATGGAAGGTGAAGATGAGGTTGCGTTCATTAAAGGTAATGATGATGGGACTAGTTGTAGCTGGGAATACTCGTCGGATTCGAAGAACAGCAGAACGACTAAAACTAGTAGCGGGAAAATGTCGACCACCAATGAATCCATTAGAGGAATGTCTGGAACGATCTTCTCTGAGATCAAGGATCCCACTGTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

886

Amino Acids

98.83

Weight (kDa)

6.5

Isoelectric Point (pI)

41.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	35 - 416	1.7e-29	Malectin-like domain
Malectin	PF11721	266 - 376	7e-07	Malectin domain
Pkinase	PF00069	536 - 800	1.2e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	537 - 801	2e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	128, 2143
AatII	GACGTC	1 cut(s)	2128
Acc65I	GGTACC	1 cut(s)	651
AccB1I	GGYRCC	2 cut(s)	651, 1765
AccBSI	CCGCTC	4 cut(s)	375, 674, 1067, 2380
AccI	GTMKAC	2 cut(s)	1635, 2585
AccII	CGCG	5 cut(s)	197, 362, 1521, 1913, 1918
AccIII	TCCGGA	1 cut(s)	505
AclWI	GGATC	4 cut(s)	497, 2285, 2636, 2649
AcoI	YGGCCR	7 cut(s)	66, 234, 238, 883, 1295, 2010, 2381
AcsI	RAATTY	5 cut(s)	278, 485, 833, 1166, 1899
AcuI	CTGAAG	1 cut(s)	2414
AcyI	GRCGYC	2 cut(s)	1614, 2125
AdeI	CACNNNGTG	2 cut(s)	725, 1706
AfiI	CCNNNNNNNGG	9 cut(s)	64, 648, 892, 1293, 1297, 1413, 1537, 1775, 1939
AflIII	ACRYGT	2 cut(s)	811, 2321
AgeI	ACCGGT	2 cut(s)	648, 1666
AgsI	TTSAA	9 cut(s)	436, 523, 575, 1166, 1228, 1246, 1252, 1594, 1720
AhlI	ACTAGT	2 cut(s)	2513, 2567
AjiI	CACGTC	3 cut(s)	127, 1972, 2458
AjnI	CCWGG	2 cut(s)	447, 749
AleI	CACNNNNGTG	1 cut(s)	2081
AloI	GAACNNNNNNTCC	2 cut(s)	1083, 1115
Alw21I	GWGCWC	3 cut(s)	717, 1711, 1982
Alw26I	GTCTC	2 cut(s)	464, 1521
Alw44I	GTGCAC	1 cut(s)	1707
AlwI	GGATC	4 cut(s)	497, 2285, 2636, 2649
Aor13HI	TCCGGA	1 cut(s)	505
ApaLI	GTGCAC	1 cut(s)	1707
ApeKI	GCWGC	3 cut(s)	1924, 2315, 2425
ApoI	RAATTY	5 cut(s)	278, 485, 833, 1166, 1899
ArsI	GACNNNNNNTTYG	2 cut(s)	1334, 1366
AsiGI	ACCGGT	2 cut(s)	648, 1666
Asp700I	GAANNNNTTC	1 cut(s)	2333
Asp718I	GGTACC	1 cut(s)	651
AspLEI	GCGC	5 cut(s)	197, 217, 862, 1913, 1918
AspS9I	GGNCC	4 cut(s)	626, 1277, 1481, 1944
AsuC2I	CCSGG	2 cut(s)	306, 1322
AsuHPI	GGTGA	5 cut(s)	631, 711, 1808, 2095, 2483
AsuII	TTCGAA	1 cut(s)	2543
AsuNHI	GCTAGC	1 cut(s)	1363
AvaII	GGWCC	1 cut(s)	1277
AxyI	CCTNAGG	1 cut(s)	1446
BaeGI	GKGCMC	2 cut(s)	1711, 1770
BalI	TGGCCA	1 cut(s)	2012
BamHI	GGATCC	1 cut(s)	2641
BanI	GGYRCC	2 cut(s)	651, 1765
BanII	GRGCYC	2 cut(s)	1454, 2048
BauI	CACGAG	1 cut(s)	1712
BbsI	GAAGAC	1 cut(s)	735
Bbv12I	GWGCWC	3 cut(s)	717, 1711, 1982
BbvI	GCAGC	3 cut(s)	1911, 2327, 2437
BccI	CCATC	7 cut(s)	542, 617, 1003, 1649, 1761, 2392, 2501
BcgI	CGANNNNNNTGC	2 cut(s)	1342, 1376
BciT130I	CCWGG	2 cut(s)	449, 751
BciVI	GTATCC	2 cut(s)	545, 1202
BclI	TGATCA	3 cut(s)	477, 1843, 1956
BcnI	CCSGG	2 cut(s)	306, 1322
BcoDI	GTCTC	2 cut(s)	464, 1521
BcuI	ACTAGT	2 cut(s)	2513, 2567
BfaI	CTAG	8 cut(s)	540, 968, 1332, 1364, 1461, 2237, 2514, 2568
BfmI	CTRYAG	2 cut(s)	180, 2119
BfuI	GTATCC	2 cut(s)	545, 1202
BisI	GCNGC	7 cut(s)	1522, 1578, 1914, 1925, 2316, 2381, 2426
BlsI	GCNGC	7 cut(s)	1523, 1579, 1915, 1926, 2317, 2382, 2427
BmcAI	AGTACT	1 cut(s)	2117
Bme1390I	CCNGG	4 cut(s)	306, 449, 751, 1322
Bme18I	GGWCC	1 cut(s)	1277
BmgBI	CACGTC	3 cut(s)	127, 1972, 2458
BmgT120I	GGNCC	4 cut(s)	626, 1277, 1481, 1944
BmiI	GGNNCC	8 cut(s)	653, 1101, 1453, 1482, 1767, 1945, 2047, 2643
BmrFI	CCNGG	4 cut(s)	306, 449, 751, 1322
BmsI	GCATC	6 cut(s)	202, 445, 745, 1207, 1725, 1914
BmtI	GCTAGC	1 cut(s)	1367
BpiI	GAAGAC	1 cut(s)	735
BplI	GAGNNNNNCTC	2 cut(s)	699, 731
BpmI	CTGGAG	1 cut(s)	698
Bpu14I	TTCGAA	1 cut(s)	2543
BpuEI	CTTGAG	2 cut(s)	410, 2432
BpuMI	CCSGG	2 cut(s)	306, 1322
Bsa29I	ATCGAT	2 cut(s)	1650, 2387
BsaAI	YACGTR	1 cut(s)	1841
BsaBI	GATNNNNATC	1 cut(s)	2295
BsaHI	GRCGYC	2 cut(s)	1614, 2125
BsaJI	CCNNGG	5 cut(s)	201, 218, 750, 1292, 2013
BsaWI	WCCGGW	6 cut(s)	288, 505, 641, 648, 1102, 1666
BsaXI	ACNNNNNCTCC	4 cut(s)	520, 550, 671, 701
Bsc4I	CCNNNNNNNGG	9 cut(s)	64, 648, 892, 1293, 1297, 1413, 1537, 1775, 1939
Bse118I	RCCGGY	7 cut(s)	236, 648, 734, 881, 885, 1376, 1666
Bse1I	ACTGG	4 cut(s)	66, 1078, 1210, 1566
Bse21I	CCTNAGG	1 cut(s)	1446
Bse3DI	GCAATG	2 cut(s)	550, 2420
Bse8I	GATNNNNATC	1 cut(s)	2295
BseAI	TCCGGA	1 cut(s)	505
BseBI	CCWGG	2 cut(s)	449, 751
BseCI	ATCGAT	2 cut(s)	1650, 2387
BseDI	CCNNGG	5 cut(s)	201, 218, 750, 1292, 2013
BseGI	GGATG	9 cut(s)	116, 217, 318, 760, 949, 1526, 1959, 2002, 2155
BseJI	GATNNNNATC	1 cut(s)	2295
BseLI	CCNNNNNNNGG	9 cut(s)	64, 648, 892, 1293, 1297, 1413, 1537, 1775, 1939
BseMI	GCAATG	2 cut(s)	550, 2420
BseMII	CTCAG	3 cut(s)	288, 2130, 2622
BseNI	ACTGG	4 cut(s)	66, 1078, 1210, 1566
BseRI	GAGGAG	1 cut(s)	9
BseSI	GKGCMC	2 cut(s)	1711, 1770
BseX3I	CGGCCG	3 cut(s)	234, 883, 1295
BseXI	GCAGC	3 cut(s)	1911, 2327, 2437
BseYI	CCCAGC	2 cut(s)	337, 2523
BsgI	GTGCAG	3 cut(s)	594, 1910, 2460
Bsh1236I	CGCG	5 cut(s)	197, 362, 1521, 1913, 1918
Bsh1285I	CGRYCG	6 cut(s)	90, 224, 237, 373, 886, 1298
BshNI	GGYRCC	2 cut(s)	651, 1765
BshTI	ACCGGT	2 cut(s)	648, 1666
BshVI	ATCGAT	2 cut(s)	1650, 2387
BsiEI	CGRYCG	6 cut(s)	90, 224, 237, 373, 886, 1298
BsiHKAI	GWGCWC	3 cut(s)	717, 1711, 1982
BslFI	GGGAC	3 cut(s)	1726, 1846, 2524
BslI	CCNNNNNNNGG	9 cut(s)	64, 648, 892, 1293, 1297, 1413, 1537, 1775, 1939
BsmAI	GTCTC	2 cut(s)	464, 1521
BsmBI	CGTCTC	1 cut(s)	464
BsmFI	GGGAC	3 cut(s)	1726, 1846, 2524
Bsp119I	TTCGAA	1 cut(s)	2543
Bsp1286I	GDGCHC	6 cut(s)	717, 1454, 1711, 1770, 1982, 2048
Bsp13I	TCCGGA	1 cut(s)	505
Bsp1407I	TGTACA	1 cut(s)	1851
BspCNI	CTCAG	3 cut(s)	287, 2131, 2623
BspDI	ATCGAT	2 cut(s)	1650, 2387
BspEI	TCCGGA	1 cut(s)	505
BspFNI	CGCG	5 cut(s)	197, 362, 1521, 1913, 1918
BspLI	GGNNCC	8 cut(s)	653, 1101, 1453, 1482, 1767, 1945, 2047, 2643
BspOI	GCTAGC	1 cut(s)	1367
BspPI	GGATC	4 cut(s)	497, 2285, 2636, 2649
BspQI	GCTCTTC	1 cut(s)	1970
BspT104I	TTCGAA	1 cut(s)	2543
BspT107I	GGYRCC	2 cut(s)	651, 1765
BsrBI	CCGCTC	4 cut(s)	375, 674, 1067, 2380
BsrDI	GCAATG	2 cut(s)	550, 2420
BsrFI	RCCGGY	7 cut(s)	236, 648, 734, 881, 885, 1376, 1666
BsrGI	TGTACA	1 cut(s)	1851
BsrI	ACTGG	4 cut(s)	66, 1078, 1210, 1566
BssAI	RCCGGY	7 cut(s)	236, 648, 734, 881, 885, 1376, 1666
BssECI	CCNNGG	5 cut(s)	201, 218, 750, 1292, 2013
BssNI	GRCGYC	2 cut(s)	1614, 2125
BssSI	CACGAG	1 cut(s)	1712
BssT1I	CCWWGG	2 cut(s)	201, 2013
Bst2BI	CACGAG	1 cut(s)	1712
Bst2UI	CCWGG	2 cut(s)	449, 751
Bst6I	CTCTTC	3 cut(s)	392, 861, 1970
BstACI	GRCGYC	2 cut(s)	1614, 2125
BstAUI	TGTACA	1 cut(s)	1851
BstBAI	YACGTR	1 cut(s)	1841
BstBI	TTCGAA	1 cut(s)	2543
BstC8I	GCNNGC	7 cut(s)	238, 591, 713, 1189, 1365, 2199, 2346
BstDEI	CTNAG	7 cut(s)	274, 775, 1446, 2139, 2250, 2300, 2631
BstDSI	CCRYGG	2 cut(s)	218, 1292
BstF5I	GGATG	9 cut(s)	116, 217, 318, 760, 949, 1526, 1959, 2002, 2155
BstFNI	CGCG	5 cut(s)	197, 362, 1521, 1913, 1918
BstHHI	GCGC	5 cut(s)	197, 217, 862, 1913, 1918
BstMAI	GTCTC	2 cut(s)	464, 1521
BstMCI	CGRYCG	6 cut(s)	90, 224, 237, 373, 886, 1298
BstMWI	GCNNNNNNNGC	6 cut(s)	359, 1184, 1373, 1924, 2198, 2431
BstNI	CCWGG	2 cut(s)	449, 751
BstNSI	RCATGY	3 cut(s)	742, 815, 2325
BstSCI	CCNGG	4 cut(s)	304, 447, 749, 1320
BstSFI	CTRYAG	2 cut(s)	180, 2119
BstSLI	GKGCMC	2 cut(s)	1711, 1770
BstUI	CGCG	5 cut(s)	197, 362, 1521, 1913, 1918
BstV1I	GCAGC	3 cut(s)	1911, 2327, 2437
BstV2I	GAAGAC	1 cut(s)	735
BstX2I	RGATCY	1 cut(s)	2641
BstXI	CCANNNNNNTGG	3 cut(s)	208, 623, 1085
BstYI	RGATCY	1 cut(s)	2641
BstZI	CGGCCG	3 cut(s)	234, 883, 1295
Bsu15I	ATCGAT	2 cut(s)	1650, 2387
Bsu36I	CCTNAGG	1 cut(s)	1446
BsuI	GTATCC	2 cut(s)	545, 1202
BsuTUI	ATCGAT	2 cut(s)	1650, 2387
BtgI	CCRYGG	2 cut(s)	218, 1292
BtrI	CACGTC	3 cut(s)	127, 1972, 2458
BtsCI	GGATG	9 cut(s)	116, 217, 318, 760, 949, 1526, 1959, 2002, 2155
BtsI	GCAGTG	2 cut(s)	606, 855
BtsIMutI	CAGTG	5 cut(s)	606, 855, 1085, 1559, 2646
Cac8I	GCNNGC	7 cut(s)	238, 591, 713, 1189, 1365, 2199, 2346
CfoI	GCGC	5 cut(s)	197, 217, 862, 1913, 1918
Cfr10I	RCCGGY	7 cut(s)	236, 648, 734, 881, 885, 1376, 1666
Cfr13I	GGNCC	4 cut(s)	626, 1277, 1481, 1944
ClaI	ATCGAT	2 cut(s)	1650, 2387
CseI	GACGC	3 cut(s)	186, 1603, 1843
CspAI	ACCGGT	2 cut(s)	648, 1666
CspCI	CAANNNNNGTGG	4 cut(s)	385, 420, 685, 720
DdeI	CTNAG	7 cut(s)	274, 775, 1446, 2139, 2250, 2300, 2631
DraIII	CACNNNGTG	2 cut(s)	725, 1706
DrdI	GACNNNNNNGTC	2 cut(s)	128, 2143
DseDI	GACNNNNNNGTC	2 cut(s)	128, 2143
EaeI	YGGCCR	7 cut(s)	66, 234, 238, 883, 1295, 2010, 2381
EagI	CGGCCG	3 cut(s)	234, 883, 1295
Eam1104I	CTCTTC	3 cut(s)	392, 861, 1970
EarI	CTCTTC	3 cut(s)	392, 861, 1970
EciI	GGCGGA	1 cut(s)	1580
EclXI	CGGCCG	3 cut(s)	234, 883, 1295
Eco130I	CCWWGG	2 cut(s)	201, 2013
Eco24I	GRGCYC	2 cut(s)	1454, 2048
Eco32I	GATATC	1 cut(s)	160
Eco47I	GGWCC	1 cut(s)	1277
Eco52I	CGGCCG	3 cut(s)	234, 883, 1295
Eco57I	CTGAAG	1 cut(s)	2414
Eco81I	CCTNAGG	1 cut(s)	1446
EcoRI	GAATTC	3 cut(s)	278, 485, 1166
EcoRII	CCWGG	2 cut(s)	447, 749
EcoRV	GATATC	1 cut(s)	160
EcoT14I	CCWWGG	2 cut(s)	201, 2013
EcoT38I	GRGCYC	2 cut(s)	1454, 2048
ErhI	CCWWGG	2 cut(s)	201, 2013
Esp3I	CGTCTC	1 cut(s)	464
FaqI	GGGAC	3 cut(s)	1726, 1846, 2524
FauI	CCCGC	2 cut(s)	1613, 2567
FbaI	TGATCA	3 cut(s)	477, 1843, 1956
FblI	GTMKAC	2 cut(s)	1635, 2585
Fnu4HI	GCNGC	7 cut(s)	1522, 1578, 1914, 1925, 2316, 2381, 2426
FokI	GGATG	9 cut(s)	103, 224, 305, 767, 936, 1513, 1946, 2009, 2162
FriOI	GRGCYC	2 cut(s)	1454, 2048
FseI	GGCCGGCC	1 cut(s)	240
Fsp4HI	GCNGC	7 cut(s)	1522, 1578, 1914, 1925, 2316, 2381, 2426
FspBI	CTAG	8 cut(s)	540, 968, 1332, 1364, 1461, 2237, 2514, 2568
GlaI	GCGC	5 cut(s)	196, 216, 861, 1912, 1917
GluI	GCNGC	7 cut(s)	1522, 1578, 1914, 1925, 2316, 2381, 2426
GsaI	CCCAGC	2 cut(s)	341, 2527
GsuI	CTGGAG	1 cut(s)	698
HgaI	GACGC	3 cut(s)	186, 1603, 1843
HhaI	GCGC	5 cut(s)	197, 217, 862, 1913, 1918
Hin1I	GRCGYC	2 cut(s)	1614, 2125
Hin6I	GCGC	5 cut(s)	195, 215, 860, 1911, 1916
HinP1I	GCGC	5 cut(s)	195, 215, 860, 1911, 1916
HincII	GTYRAC	4 cut(s)	358, 2129, 2136, 2586
HindII	GTYRAC	4 cut(s)	358, 2129, 2136, 2586
HindIII	AAGCTT	1 cut(s)	170
HinfI	GANTC	8 cut(s)	137, 292, 693, 1196, 1337, 1694, 2540, 2597
HphI	GGTGA	5 cut(s)	631, 711, 1808, 2095, 2483
Hpy99I	CGWCG	8 cut(s)	125, 128, 704, 1412, 1540, 1619, 1778, 2539
HpyAV	CCTTC	5 cut(s)	39, 430, 1943, 2080, 2462
HpyCH4IV	ACGT	9 cut(s)	126, 146, 699, 1632, 1840, 1971, 2125, 2397, 2457
HpyF10VI	GCNNNNNNNGC	6 cut(s)	359, 1184, 1373, 1924, 2198, 2431
HpyF3I	CTNAG	7 cut(s)	274, 775, 1446, 2139, 2250, 2300, 2631
HpySE526I	ACGT	9 cut(s)	126, 146, 699, 1632, 1840, 1971, 2125, 2397, 2457
Hsp92I	GRCGYC	2 cut(s)	1614, 2125
HspAI	GCGC	5 cut(s)	195, 215, 860, 1911, 1916
Kpn2I	TCCGGA	1 cut(s)	505
KpnI	GGTACC	1 cut(s)	655
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Ksp22I	TGATCA	3 cut(s)	477, 1843, 1956
LguI	GCTCTTC	1 cut(s)	1970
LmnI	GCTCC	5 cut(s)	22, 1064, 1457, 1885, 2051
Lsp1109I	GCAGC	3 cut(s)	1911, 2327, 2437
LweI	GCATC	6 cut(s)	202, 445, 745, 1207, 1725, 1914
MaeI	CTAG	8 cut(s)	540, 968, 1332, 1364, 1461, 2237, 2514, 2568
MaeII	ACGT	9 cut(s)	126, 146, 699, 1632, 1840, 1971, 2125, 2397, 2457
MaeIII	GTNAC	4 cut(s)	637, 1628, 1698, 1967
MbiI	CCGCTC	4 cut(s)	375, 674, 1067, 2380
MflI	RGATCY	1 cut(s)	2641
MhlI	GDGCHC	6 cut(s)	717, 1454, 1711, 1770, 1982, 2048
MlsI	TGGCCA	1 cut(s)	2012
MluCI	AATT	9 cut(s)	163, 278, 485, 576, 833, 956, 1166, 1247, 1899
MluNI	TGGCCA	1 cut(s)	2012
MlyI	GAGTC	1 cut(s)	1703
MmeI	TCCRAC	9 cut(s)	110, 144, 1479, 1518, 1756, 1974, 2046, 2127, 2517
Mox20I	TGGCCA	1 cut(s)	2012
MroI	TCCGGA	1 cut(s)	505
MroNI	GCCGGC	1 cut(s)	236
MroXI	GAANNNNTTC	1 cut(s)	2333
MscI	TGGCCA	1 cut(s)	2012
MseI	TTAA	3 cut(s)	105, 495, 2493
MslI	CAYNNNNRTG	4 cut(s)	737, 984, 2054, 2081
Msp20I	TGGCCA	1 cut(s)	2012
MspR9I	CCNGG	4 cut(s)	306, 449, 751, 1322
MteI	GCGCNGCGC	1 cut(s)	1914
MvaI	CCWGG	2 cut(s)	449, 751
MvnI	CGCG	5 cut(s)	197, 362, 1521, 1913, 1918
MwoI	GCNNNNNNNGC	6 cut(s)	359, 1184, 1373, 1924, 2198, 2431
NaeI	GCCGGC	1 cut(s)	238
NciI	CCSGG	2 cut(s)	306, 1322
NgoMIV	GCCGGC	1 cut(s)	236
NheI	GCTAGC	1 cut(s)	1363
NlaIV	GGNNCC	8 cut(s)	653, 1101, 1453, 1482, 1767, 1945, 2047, 2643
NmuCI	GTSAC	3 cut(s)	637, 1698, 1967
NspI	RCATGY	3 cut(s)	742, 815, 2325
NspV	TTCGAA	1 cut(s)	2543
OliI	CACNNNNGTG	1 cut(s)	2081
PciI	ACATGT	2 cut(s)	811, 2321
PciSI	GCTCTTC	1 cut(s)	1970
PcsI	WCGNNNNNNNCGW	3 cut(s)	366, 708, 2540
PdiI	GCCGGC	1 cut(s)	238
PdmI	GAANNNNTTC	1 cut(s)	2333
PfeI	GAWTC	7 cut(s)	137, 292, 693, 1196, 1337, 2540, 2597
PflFI	GACNNNGTC	2 cut(s)	128, 1504
PinAI	ACCGGT	2 cut(s)	648, 1666
PkrI	GCNGC	7 cut(s)	1523, 1579, 1915, 1926, 2317, 2382, 2427
PleI	GAGTC	1 cut(s)	1702
PpsI	GAGTC	1 cut(s)	1702
Ppu21I	YACGTR	1 cut(s)	1841
PscI	ACATGT	2 cut(s)	811, 2321
Psp6I	CCWGG	2 cut(s)	447, 749
PspFI	CCCAGC	2 cut(s)	337, 2523
PspGI	CCWGG	2 cut(s)	447, 749
PspN4I	GGNNCC	8 cut(s)	653, 1101, 1453, 1482, 1767, 1945, 2047, 2643
PspPI	GGNCC	4 cut(s)	626, 1277, 1481, 1944
PsuI	RGATCY	1 cut(s)	2641
PsyI	GACNNNGTC	2 cut(s)	128, 1504
RigI	GGCCGGCC	1 cut(s)	240
RseI	CAYNNNNRTG	4 cut(s)	737, 984, 2054, 2081
SalI	GTCGAC	1 cut(s)	2584
SapI	GCTCTTC	1 cut(s)	1970
SaqAI	TTAA	3 cut(s)	105, 495, 2493
SatI	GCNGC	7 cut(s)	1522, 1578, 1914, 1925, 2316, 2381, 2426
Sau96I	GGNCC	4 cut(s)	626, 1277, 1481, 1944
ScaI	AGTACT	1 cut(s)	2117
SchI	GAGTC	1 cut(s)	1703
ScrFI	CCNGG	4 cut(s)	306, 449, 751, 1322
SduI	GDGCHC	6 cut(s)	717, 1454, 1711, 1770, 1982, 2048
SfaNI	GCATC	6 cut(s)	202, 445, 745, 1207, 1725, 1914
SfcI	CTRYAG	2 cut(s)	180, 2119
SfuI	TTCGAA	1 cut(s)	2543
SinI	GGWCC	1 cut(s)	1277
SmiMI	CAYNNNNRTG	4 cut(s)	737, 984, 2054, 2081
SmlI	CTYRAG	2 cut(s)	425, 2411
SmoI	CTYRAG	2 cut(s)	425, 2411
SpeI	ACTAGT	2 cut(s)	2513, 2567
Sse9I	AATT	9 cut(s)	163, 278, 485, 576, 833, 956, 1166, 1247, 1899
SspMI	CTAG	8 cut(s)	540, 968, 1332, 1364, 1461, 2237, 2514, 2568
StyD4I	CCNGG	4 cut(s)	304, 447, 749, 1320
StyI	CCWWGG	2 cut(s)	201, 2013
TaiI	ACGT	9 cut(s)	129, 149, 702, 1635, 1843, 1974, 2128, 2400, 2460
TaqII	GACCGA	2 cut(s)	104, 1739
TasI	AATT	9 cut(s)	163, 278, 485, 576, 833, 956, 1166, 1247, 1899
TatI	WGTACW	5 cut(s)	771, 946, 1381, 1851, 2115
TauI	GCSGC	4 cut(s)	1524, 1580, 1916, 2383
TfiI	GAWTC	7 cut(s)	137, 292, 693, 1196, 1337, 2540, 2597
Tru1I	TTAA	3 cut(s)	105, 495, 2493
Tru9I	TTAA	3 cut(s)	105, 495, 2493
TscAI	CASTG	5 cut(s)	613, 862, 1085, 1566, 2653
TseFI	GTSAC	3 cut(s)	637, 1698, 1967
TseI	GCWGC	3 cut(s)	1924, 2315, 2425
Tsp45I	GTSAC	3 cut(s)	637, 1698, 1967
TspGWI	ACGGA	2 cut(s)	1396, 1802
TspRI	CASTG	5 cut(s)	613, 862, 1085, 1566, 2653
Tth111I	GACNNNGTC	2 cut(s)	128, 1504
VneI	GTGCAC	1 cut(s)	1707
VpaK11BI	GGWCC	1 cut(s)	1277
XapI	RAATTY	5 cut(s)	278, 485, 833, 1166, 1899
XceI	RCATGY	3 cut(s)	742, 815, 2325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1878
XmiI	GTMKAC	2 cut(s)	1635, 2585
XmnI	GAANNNNTTC	1 cut(s)	2333
XspI	CTAG	8 cut(s)	540, 968, 1332, 1364, 1461, 2237, 2514, 2568
ZraI	GACGTC	1 cut(s)	2126
ZrmI	AGTACT	1 cut(s)	2117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.