Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000124.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

10607 .. 13138

Gene Structure 2532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000124.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

atgaaaccaatcatcactcgtctctacctctacatgttcctccacatcctcactctcttcgtcaccggtcagtcgccaccatacattccggtcgacaatatcaccctcgcctgcggcagttccggccaatcgagctccaatggcctcagaaagtggagtggagatatcgactcaaaattcaccccaataggtaccgcatcccaatccatcgatgcaccgcgatcgtccaccgctagccaagtcccttacaccaaagctcggctctctcgctccaaattcacttacacaattcccctctctcccggccaaaaattcatccgcttgcatttcaatccagatacatacaacccggacttccaacgctccaattccctcttctccgtcaccgctgccggcttcattctcctcaaaaacttcaacgcctccgacaccgccgacccttcccacaggtccccgctggtcagagaattctgtgtagacatcaagaccggacagagactggagatcaccttcaaaccaaacaaagatgcctacgctttcatcaacggaatcgaaatcgtgtccatgcccaccggtctttactatacttcttcagctaaattggtcggcaccagcgcaagcacgtatccgatcgaaatcaacacagctctggagatggtgtaccgaatcaacgtcggcggaggccccatctcgccagaagcagacaccggaatgtaccggaattgggacaccgccgacgaaatttatttggatgatttaagtaaaaaattcagcgtgctaccacagaacaatacaatcgagctcaattttgtcgaagttccaaaatactctgctccaaaaccagtttacacaacaggtcggtcaatggggatgaacaaaaccaccaacaagagctataacctcacatgggtatttcccttagatcccaagttttattacctggtgagactccatttctgtgagtttgaatctgatattaccaagtacggagatcgatcgtttcaaatcttcatggccaatcaaaccgcagaaattttttttgatgttatctcagagagcggagcaaatgggaatccagtttacaaagactacgttgtcggaatgttcatgtctccggttggaagcgagaaggaagttaacctctctctagcactctcagcgctccagaaagattggtttactacttacaacgatgccatcttgaacgggctagaaatcttcaagctcagcgacccgagtgggaatcttgccggagacccgccccaggtacaaccgaagagcccaagtaagaagaagtctactcctctggcagctattattgcaggtgtagtttccgggttacttatgctctctcttctcggattttttgttttccggcgagggagaaaggccaaggactatagctcaagtcaagtaaagtggggtctgctttcttttccaaccactactaagtccaccacgtcttacggttcatctctgccgtccgagctgtgtcatcgcttttcattggcggagatcagagccgccacgcaaaactttgatgattcgaacgttattggggttggcgggtttggtaatgtgtacaaaggtaccatcaacggtgcgtccaccccctttgcgatcaaacggctgaaagcgaagtcgtcacagggtgcccgtgagttcaagacagagatcgaattgctctcccaactccgtcatgtccatctcgtgtctctggtcgggtactgtgacgacaacggtgagatgattttggtgtatgactatatggaaaatgggaccctacgcgatcatttgtacgactccggaaatccacctcttccttgggaacaaaggcttcaagtttgtattggtgccgcgcgtgggttgcactaccttcacactggtgtcaagtgtatgatcatccaccgagacgtgaagagcacgaacatcttgctggacgataaatgggtggccaaggtcgctgatttcgggttgtcgaaaatgggcacgaccaccatgtccaagacccacattagcaccatggtcaaaggcagtttcggctatctcgacccggagtactaccgtcgtcaacaattgactgagaagtctgatgtgtactcgttcggcgtggtattgtgtgaggtgttgtgtgctaggccggctttgatccgtacagcggacaagaagcaaatgaacctagctgcatggtttaagacctgtaatggagacggaacgcttgaccaaattattgacccgaatttgaggggtaagattgtaaatgagtgcttgaacaagtttgttgaaattgcaattagttgtatgcatgataattggggtgaacgaccgtccatgaatgatgttatatgggcgcttgagtgtgcattaaaacttcaacagaccgcagagggttcggatttggatttcagtgctggaaagaagggtgaagatgaggcttcactggtgaatgatagtgatgtagggtttagtggcacatgggaagactcgtcaagttcgaagaatagcaaggtgaccaaaactagtagtagttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

843

Amino Acids

93.39

Weight (kDa)

8.03

Isoelectric Point (pI)

41.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1313
AasI	GACNNNNNNGTC	3 cut(s)	1094, 1999, 2086
Acc36I	ACCTGC	1 cut(s)	1313
Acc65I	GGTACC	2 cut(s)	191, 1589
AccB1I	GGYRCC	5 cut(s)	191, 608, 1589, 1652, 1853
AccBSI	CCGCTC	1 cut(s)	1059
AccI	GTMKAC	3 cut(s)	93, 477, 1298
AccII	CGCG	4 cut(s)	220, 1788, 1859, 1861
AccIII	TCCGGA	1 cut(s)	1805
AclI	AACGTT	1 cut(s)	1551
AclWI	GGATC	2 cut(s)	917, 2143
AcoI	YGGCCR	4 cut(s)	124, 304, 1014, 1953
AcsI	RAATTY	8 cut(s)	176, 275, 311, 467, 741, 767, 1032, 2239
AcuI	CTGAAG	1 cut(s)	576
AdeI	CACNNNGTG	1 cut(s)	1652
AfeI	AGCGCT	1 cut(s)	1161
AfiI	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1264, 1863, 2158
AflIII	ACRYGT	1 cut(s)	33
AgeI	ACCGGT	2 cut(s)	65, 572
AhlI	ACTAGT	1 cut(s)	2519
AjiI	CACGTC	2 cut(s)	1461, 1915
AjnI	CCWGG	2 cut(s)	939, 1263
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AleI	CACNNNNGTG	1 cut(s)	1884
Alw21I	GWGCWC	3 cut(s)	137, 804, 1925
Alw26I	GTCTC	8 cut(s)	26, 490, 940, 1116, 1248, 1719, 1905, 2202
AlwI	GGATC	2 cut(s)	917, 2143
AlwNI	CAGNNNCTG	1 cut(s)	499
Ama87I	CYCGRG	1 cut(s)	1234
Aor13HI	TCCGGA	1 cut(s)	1805
Aor51HI	AGCGCT	1 cut(s)	1161
AoxI	GGCC	8 cut(s)	124, 142, 304, 682, 1014, 1389, 1953, 2138
ApeKI	GCWGC	3 cut(s)	389, 1310, 2183
ApoI	RAATTY	8 cut(s)	176, 275, 311, 467, 741, 767, 1032, 2239
AsiGI	ACCGGT	2 cut(s)	65, 572
Asp718I	GGTACC	2 cut(s)	191, 1589
AspLEI	GCGC	4 cut(s)	617, 1162, 1861, 2353
AspS9I	GGNCC	3 cut(s)	450, 683, 1779
AsuC2I	CCSGG	4 cut(s)	303, 350, 1336, 2054
AsuII	TTCGAA	2 cut(s)	1547, 2495
AsuNHI	GCTAGC	1 cut(s)	233
AvaI	CYCGRG	1 cut(s)	1234
AvaII	GGWCC	2 cut(s)	450, 1779
BaeGI	GKGCMC	2 cut(s)	1657, 1991
BaeI	ACNNNNGTAYC	2 cut(s)	1573, 1606
BalI	TGGCCA	2 cut(s)	1016, 1955
BanI	GGYRCC	5 cut(s)	191, 608, 1589, 1652, 1853
BanII	GRGCYC	3 cut(s)	137, 804, 1283
BauI	CACGAG	1 cut(s)	1709
BbsI	GAAGAC	1 cut(s)	2487
Bbv12I	GWGCWC	3 cut(s)	137, 804, 1925
BbvI	GCAGC	3 cut(s)	376, 1322, 2170
BccI	CCATC	6 cut(s)	215, 649, 695, 1205, 1601, 1713
BceAI	ACGGC	2 cut(s)	1465, 1643
BcgI	CGANNNNNNTGC	6 cut(s)	204, 238, 1915, 1949, 2373, 2407
BciT130I	CCWGG	2 cut(s)	941, 1265
BciVI	GTATCC	1 cut(s)	636
BclI	TGATCA	1 cut(s)	1899
BcnI	CCSGG	4 cut(s)	303, 350, 1336, 2054
BcoDI	GTCTC	8 cut(s)	26, 490, 940, 1116, 1248, 1719, 1905, 2202
BcuI	ACTAGT	1 cut(s)	2519
BfaI	CTAG	6 cut(s)	234, 1148, 1211, 2136, 2180, 2520
BfmI	CTRYAG	1 cut(s)	1399
BfoI	RGCGCY	2 cut(s)	1163, 2354
BfuAI	ACCTGC	1 cut(s)	1313
BfuI	GTATCC	1 cut(s)	636
BisI	GCNGC	6 cut(s)	115, 390, 1311, 1524, 1857, 2184
BlpI	GCTNAGC	1 cut(s)	1226
BlsI	GCNGC	6 cut(s)	116, 391, 1312, 1525, 1858, 2185
BmcAI	AGTACT	1 cut(s)	2060
Bme1390I	CCNGG	6 cut(s)	303, 350, 941, 1265, 1336, 2054
Bme18I	GGWCC	2 cut(s)	450, 1779
BmeT110I	CYCGRG	1 cut(s)	1234
BmgBI	CACGTC	2 cut(s)	1461, 1915
BmgT120I	GGNCC	3 cut(s)	450, 683, 1779
BmiI	GGNNCC	9 cut(s)	193, 452, 610, 685, 1591, 1654, 1780, 1781, 1855
BmrFI	CCNGG	6 cut(s)	303, 350, 941, 1265, 1336, 2054
BmsI	GCATC	4 cut(s)	202, 206, 517, 1183
BmtI	GCTAGC	1 cut(s)	237
BpiI	GAAGAC	1 cut(s)	2487
BpmI	CTGGAG	3 cut(s)	521, 671, 1148
Bpu1102I	GCTNAGC	1 cut(s)	1226
Bpu14I	TTCGAA	2 cut(s)	1547, 2495
BpuEI	CTTGAG	2 cut(s)	1390, 2375
BpuMI	CCSGG	4 cut(s)	303, 350, 1336, 2054
Bsa29I	ATCGAT	2 cut(s)	210, 994
BsaAI	YACGTR	1 cut(s)	624
BsaBI	GATNNNNATC	1 cut(s)	635
BsaI	GGTCTC	1 cut(s)	1248
BsaJI	CCNNGG	5 cut(s)	1263, 1392, 1823, 1956, 2022
BsaWI	WCCGGW	8 cut(s)	65, 88, 488, 572, 707, 717, 1114, 1805
BsaXI	ACNNNNNCTCC	2 cut(s)	644, 674
Bsc4I	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1264, 1863, 2158
Bse118I	RCCGGY	4 cut(s)	65, 392, 572, 2140
Bse1I	ACTGG	5 cut(s)	504, 842, 1076, 1888, 2445
Bse8I	GATNNNNATC	1 cut(s)	635
BseAI	TCCGGA	1 cut(s)	1805
BseBI	CCWGG	2 cut(s)	941, 1265
BseCI	ATCGAT	2 cut(s)	210, 994
BseDI	CCNNGG	5 cut(s)	1263, 1392, 1823, 1956, 2022
BseGI	GGATG	6 cut(s)	45, 197, 315, 757, 876, 1902
BseJI	GATNNNNATC	1 cut(s)	635
BseLI	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1264, 1863, 2158
BseMII	CTCAG	5 cut(s)	160, 1065, 1170, 1240, 2073
BseNI	ACTGG	5 cut(s)	504, 842, 1076, 1888, 2445
BseRI	GAGGAG	2 cut(s)	395, 1293
BseSI	GKGCMC	2 cut(s)	1657, 1991
BseXI	GCAGC	3 cut(s)	376, 1322, 2170
Bsh1236I	CGCG	4 cut(s)	220, 1788, 1859, 1861
Bsh1285I	CGRYCG	5 cut(s)	93, 224, 633, 998, 2327
BshFI	GGCC	8 cut(s)	126, 144, 306, 684, 1016, 1391, 1955, 2140
BshNI	GGYRCC	5 cut(s)	191, 608, 1589, 1652, 1853
BshTI	ACCGGT	2 cut(s)	65, 572
BshVI	ATCGAT	2 cut(s)	210, 994
BsiEI	CGRYCG	5 cut(s)	93, 224, 633, 998, 2327
BsiHKAI	GWGCWC	3 cut(s)	137, 804, 1925
BsiHKCI	CYCGRG	1 cut(s)	1234
BslFI	GGGAC	4 cut(s)	227, 436, 740, 1792
BslI	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1264, 1863, 2158
BsmAI	GTCTC	8 cut(s)	26, 490, 940, 1116, 1248, 1719, 1905, 2202
BsmBI	CGTCTC	3 cut(s)	26, 1905, 2202
BsmFI	GGGAC	4 cut(s)	227, 436, 740, 1792
BsnI	GGCC	8 cut(s)	126, 144, 306, 684, 1016, 1391, 1955, 2140
Bso31I	GGTCTC	1 cut(s)	1248
BsoBI	CYCGRG	1 cut(s)	1234
Bsp119I	TTCGAA	2 cut(s)	1547, 2495
Bsp1286I	GDGCHC	6 cut(s)	137, 804, 1283, 1657, 1925, 1991
Bsp13I	TCCGGA	1 cut(s)	1805
Bsp1407I	TGTACA	1 cut(s)	1581
Bsp1720I	GCTNAGC	1 cut(s)	1226
Bsp19I	CCATGG	1 cut(s)	2022
BspANI	GGCC	8 cut(s)	126, 144, 306, 684, 1016, 1391, 1955, 2140
BspCNI	CTCAG	5 cut(s)	159, 1064, 1169, 1239, 2074
BspDI	ATCGAT	2 cut(s)	210, 994
BspEI	TCCGGA	1 cut(s)	1805
BspFNI	CGCG	4 cut(s)	220, 1788, 1859, 1861
BspLI	GGNNCC	9 cut(s)	193, 452, 610, 685, 1591, 1654, 1780, 1781, 1855
BspMI	ACCTGC	1 cut(s)	1313
BspOI	GCTAGC	1 cut(s)	237
BspPI	GGATC	2 cut(s)	917, 2143
BspQI	GCTCTTC	2 cut(s)	1271, 1913
BspT104I	TTCGAA	2 cut(s)	1547, 2495
BspT107I	GGYRCC	5 cut(s)	191, 608, 1589, 1652, 1853
BspTNI	GGTCTC	1 cut(s)	1248
BsrBI	CCGCTC	1 cut(s)	1059
BsrFI	RCCGGY	4 cut(s)	65, 392, 572, 2140
BsrGI	TGTACA	1 cut(s)	1581
BsrI	ACTGG	5 cut(s)	504, 842, 1076, 1888, 2445
BssAI	RCCGGY	4 cut(s)	65, 392, 572, 2140
BssECI	CCNNGG	5 cut(s)	1263, 1392, 1823, 1956, 2022
BssSI	CACGAG	1 cut(s)	1709
BssT1I	CCWWGG	4 cut(s)	1392, 1823, 1956, 2022
Bst2BI	CACGAG	1 cut(s)	1709
Bst2UI	CCWGG	2 cut(s)	941, 1265
Bst4CI	ACNGT	6 cut(s)	1469, 1601, 1730, 1742, 2066, 2328
Bst6I	CTCTTC	6 cut(s)	62, 380, 1271, 1359, 1824, 1913
BstAUI	TGTACA	1 cut(s)	1581
BstBAI	YACGTR	1 cut(s)	624
BstBI	TTCGAA	2 cut(s)	1547, 2495
BstC8I	GCNNGC	7 cut(s)	112, 235, 323, 394, 619, 776, 2142
BstDEI	CTNAG	7 cut(s)	146, 919, 1051, 1156, 1226, 1449, 2082
BstDSI	CCRYGG	1 cut(s)	2022
BstEII	GGTNACC	1 cut(s)	2509
BstF5I	GGATG	6 cut(s)	45, 197, 315, 757, 876, 1902
BstFNI	CGCG	4 cut(s)	220, 1788, 1859, 1861
BstH2I	RGCGCY	2 cut(s)	1163, 2354
BstHHI	GCGC	4 cut(s)	617, 1162, 1861, 2353
BstMAI	GTCTC	8 cut(s)	26, 490, 940, 1116, 1248, 1719, 1905, 2202
BstMCI	CGRYCG	5 cut(s)	93, 224, 633, 998, 2327
BstNI	CCWGG	2 cut(s)	941, 1265
BstNSI	RCATGY	1 cut(s)	37
BstPI	GGTNACC	1 cut(s)	2509
BstSCI	CCNGG	6 cut(s)	301, 348, 939, 1263, 1334, 2052
BstSFI	CTRYAG	1 cut(s)	1399
BstSLI	GKGCMC	2 cut(s)	1657, 1991
BstUI	CGCG	4 cut(s)	220, 1788, 1859, 1861
BstV1I	GCAGC	3 cut(s)	376, 1322, 2170
BstV2I	GAAGAC	1 cut(s)	2487
BstX2I	RGATCY	1 cut(s)	922
BstYI	RGATCY	1 cut(s)	922
Bsu15I	ATCGAT	2 cut(s)	210, 994
BsuI	GTATCC	1 cut(s)	636
BsuRI	GGCC	8 cut(s)	126, 144, 306, 684, 1016, 1391, 1955, 2140
BsuTUI	ATCGAT	2 cut(s)	210, 994
BtgI	CCRYGG	1 cut(s)	2022
BtgZI	GCGATG	1 cut(s)	1481
BtrI	CACGTC	2 cut(s)	1461, 1915
BtsCI	GGATG	6 cut(s)	45, 197, 315, 757, 876, 1902
BtsIMutI	CAGTG	3 cut(s)	1881, 2413, 2438
BveI	ACCTGC	1 cut(s)	1313
Cac8I	GCNNGC	7 cut(s)	112, 235, 323, 394, 619, 776, 2142
CaiI	CAGNNNCTG	1 cut(s)	499
CfoI	GCGC	4 cut(s)	617, 1162, 1861, 2353
Cfr10I	RCCGGY	4 cut(s)	65, 392, 572, 2140
Cfr13I	GGNCC	3 cut(s)	450, 683, 1779
ClaI	ATCGAT	2 cut(s)	210, 994
CseI	GACGC	1 cut(s)	1593
CsiI	ACCWGGT	1 cut(s)	939
CspAI	ACCGGT	2 cut(s)	65, 572
CspCI	CAANNNNNGTGG	4 cut(s)	1400, 1435, 1597, 1632
DdeI	CTNAG	7 cut(s)	146, 919, 1051, 1156, 1226, 1449, 2082
DraIII	CACNNNGTG	1 cut(s)	1652
DrdI	GACNNNNNNGTC	3 cut(s)	1094, 1999, 2086
DseDI	GACNNNNNNGTC	3 cut(s)	1094, 1999, 2086
EaeI	YGGCCR	4 cut(s)	124, 304, 1014, 1953
Eam1104I	CTCTTC	6 cut(s)	62, 380, 1271, 1359, 1824, 1913
EarI	CTCTTC	6 cut(s)	62, 380, 1271, 1359, 1824, 1913
EciI	GGCGGA	2 cut(s)	693, 1526
Ecl136II	GAGCTC	2 cut(s)	135, 802
Eco130I	CCWWGG	4 cut(s)	1392, 1823, 1956, 2022
Eco24I	GRGCYC	3 cut(s)	137, 804, 1283
Eco31I	GGTCTC	1 cut(s)	1248
Eco32I	GATATC	1 cut(s)	166
Eco47I	GGWCC	2 cut(s)	450, 1779
Eco47III	AGCGCT	1 cut(s)	1161
Eco53kI	GAGCTC	2 cut(s)	135, 802
Eco57I	CTGAAG	1 cut(s)	576
Eco88I	CYCGRG	1 cut(s)	1234
Eco91I	GGTNACC	1 cut(s)	2509
EcoICRI	GAGCTC	2 cut(s)	135, 802
EcoO109I	RGGNCCY	3 cut(s)	450, 683, 1779
EcoO65I	GGTNACC	1 cut(s)	2509
EcoRI	GAATTC	1 cut(s)	467
EcoRII	CCWGG	2 cut(s)	939, 1263
EcoRV	GATATC	1 cut(s)	166
EcoT14I	CCWWGG	4 cut(s)	1392, 1823, 1956, 2022
EcoT22I	ATGCAT	1 cut(s)	2307
EcoT38I	GRGCYC	3 cut(s)	137, 804, 1283
ErhI	CCWWGG	4 cut(s)	1392, 1823, 1956, 2022
Esp3I	CGTCTC	3 cut(s)	26, 1905, 2202
FaqI	GGGAC	4 cut(s)	227, 436, 740, 1792
FauI	CCCGC	3 cut(s)	462, 1266, 1559
FbaI	TGATCA	1 cut(s)	1899
FblI	GTMKAC	3 cut(s)	93, 477, 1298
Fnu4HI	GCNGC	6 cut(s)	115, 390, 1311, 1524, 1857, 2184
FokI	GGATG	6 cut(s)	32, 184, 302, 764, 883, 1889
FriOI	GRGCYC	3 cut(s)	137, 804, 1283
Fsp4HI	GCNGC	6 cut(s)	115, 390, 1311, 1524, 1857, 2184
FspBI	CTAG	6 cut(s)	234, 1148, 1211, 2136, 2180, 2520
GlaI	GCGC	4 cut(s)	616, 1161, 1860, 2352
GluI	GCNGC	6 cut(s)	115, 390, 1311, 1524, 1857, 2184
GsuI	CTGGAG	3 cut(s)	521, 671, 1148
HaeII	RGCGCY	2 cut(s)	1163, 2354
HaeIII	GGCC	8 cut(s)	126, 144, 306, 684, 1016, 1391, 1955, 2140
HgaI	GACGC	1 cut(s)	1593
HhaI	GCGC	4 cut(s)	617, 1162, 1861, 2353
Hin6I	GCGC	4 cut(s)	615, 1160, 1859, 2351
HinP1I	GCGC	4 cut(s)	615, 1160, 1859, 2351
HincII	GTYRAC	3 cut(s)	94, 1138, 2072
HindII	GTYRAC	3 cut(s)	94, 1138, 2072
HpaI	GTTAAC	1 cut(s)	1138
Hpy188III	TCNNGA	8 cut(s)	335, 484, 650, 1165, 1201, 1666, 1806, 2048
Hpy99I	CGWCG	3 cut(s)	677, 740, 2070
HpyAV	CCTTC	5 cut(s)	450, 520, 1123, 1886, 2413
HpyCH4III	ACNGT	6 cut(s)	1469, 1601, 1730, 1742, 2066, 2328
HpyCH4IV	ACGT	6 cut(s)	623, 672, 1092, 1460, 1551, 1914
HpyCH4V	TGCA	8 cut(s)	215, 325, 1322, 1870, 2186, 2291, 2305, 2363
HpyF3I	CTNAG	7 cut(s)	146, 919, 1051, 1156, 1226, 1449, 2082
HpySE526I	ACGT	6 cut(s)	623, 672, 1092, 1460, 1551, 1914
HspAI	GCGC	4 cut(s)	615, 1160, 1859, 2351
KflI	GGGWCCC	1 cut(s)	1779
Kpn2I	TCCGGA	1 cut(s)	1805
KpnI	GGTACC	2 cut(s)	195, 1593
KroI	GCCGGC	2 cut(s)	392, 2140
KroNI	GCCGGC	2 cut(s)	394, 2142
Ksp22I	TGATCA	1 cut(s)	1899
KspAI	GTTAAC	1 cut(s)	1138
LguI	GCTCTTC	2 cut(s)	1271, 1913
LmnI	GCTCC	6 cut(s)	140, 275, 368, 838, 1061, 1167
Lsp1109I	GCAGC	3 cut(s)	376, 1322, 2170
LweI	GCATC	4 cut(s)	202, 206, 517, 1183
MabI	ACCWGGT	1 cut(s)	939
MaeI	CTAG	6 cut(s)	234, 1148, 1211, 2136, 2180, 2520
MaeII	ACGT	6 cut(s)	623, 672, 1092, 1460, 1551, 1914
MaeIII	GTNAC	6 cut(s)	61, 382, 1338, 1644, 1730, 2509
MbiI	CCGCTC	1 cut(s)	1059
MfeI	CAATTG	1 cut(s)	2075
MflI	RGATCY	1 cut(s)	922
MhlI	GDGCHC	6 cut(s)	137, 804, 1283, 1657, 1925, 1991
MlsI	TGGCCA	2 cut(s)	1016, 1955
MluNI	TGGCCA	2 cut(s)	1016, 1955
MlyI	GAGTC	4 cut(s)	164, 942, 1796, 2477
MmeI	TCCRAC	5 cut(s)	382, 450, 1078, 1099, 1463
Mox20I	TGGCCA	2 cut(s)	1016, 1955
Mph1103I	ATGCAT	1 cut(s)	2307
MroI	TCCGGA	1 cut(s)	1805
MroNI	GCCGGC	2 cut(s)	392, 2140
MscI	TGGCCA	2 cut(s)	1016, 1955
MseI	TTAA	5 cut(s)	758, 1137, 2193, 2366, 2530
MslI	CAYNNNNRTG	3 cut(s)	710, 957, 1884
Msp20I	TGGCCA	2 cut(s)	1016, 1955
MspA1I	CMGCKG	3 cut(s)	389, 457, 2159
MspR9I	CCNGG	6 cut(s)	303, 350, 941, 1265, 1336, 2054
MunI	CAATTG	1 cut(s)	2075
MvaI	CCWGG	2 cut(s)	941, 1265
MvnI	CGCG	4 cut(s)	220, 1788, 1859, 1861
NaeI	GCCGGC	2 cut(s)	394, 2142
NciI	CCSGG	4 cut(s)	303, 350, 1336, 2054
NcoI	CCATGG	1 cut(s)	2022
NgoMIV	GCCGGC	2 cut(s)	392, 2140
NheI	GCTAGC	1 cut(s)	233
NlaIV	GGNNCC	9 cut(s)	193, 452, 610, 685, 1591, 1654, 1780, 1781, 1855
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	5 cut(s)	61, 382, 1644, 1730, 2509
NsiI	ATGCAT	1 cut(s)	2307
NspI	RCATGY	1 cut(s)	37
NspV	TTCGAA	2 cut(s)	1547, 2495
OliI	CACNNNNGTG	1 cut(s)	1884
PaqCI	CACCTGC	1 cut(s)	1313
PciI	ACATGT	1 cut(s)	33
PciSI	GCTCTTC	2 cut(s)	1271, 1913
PcsI	WCGNNNNNNNCGW	2 cut(s)	2046, 2492
PdiI	GCCGGC	2 cut(s)	394, 2142
PfeI	GAWTC	6 cut(s)	549, 666, 968, 1072, 1243, 1544
PinAI	ACCGGT	2 cut(s)	65, 572
PkrI	GCNGC	6 cut(s)	116, 391, 1312, 1525, 1858, 2185
Ple19I	CGATCG	3 cut(s)	224, 633, 998
PleI	GAGTC	4 cut(s)	164, 942, 1796, 2477
PpsI	GAGTC	4 cut(s)	164, 942, 1796, 2477
Ppu21I	YACGTR	1 cut(s)	624
PpuMI	RGGWCCY	2 cut(s)	450, 1779
PscI	ACATGT	1 cut(s)	33
Psp124BI	GAGCTC	2 cut(s)	137, 804
Psp1406I	AACGTT	1 cut(s)	1551
Psp5II	RGGWCCY	2 cut(s)	450, 1779
Psp6I	CCWGG	2 cut(s)	939, 1263
PspEI	GGTNACC	1 cut(s)	2509
PspGI	CCWGG	2 cut(s)	939, 1263
PspN4I	GGNNCC	9 cut(s)	193, 452, 610, 685, 1591, 1654, 1780, 1781, 1855
PspPI	GGNCC	3 cut(s)	450, 683, 1779
PspPPI	RGGWCCY	2 cut(s)	450, 1779
PstNI	CAGNNNCTG	1 cut(s)	499
PsuI	RGATCY	1 cut(s)	922
PvuI	CGATCG	3 cut(s)	224, 633, 998
RseI	CAYNNNNRTG	3 cut(s)	710, 957, 1884
SacI	GAGCTC	2 cut(s)	137, 804
SalI	GTCGAC	1 cut(s)	92
SapI	GCTCTTC	2 cut(s)	1271, 1913
SaqAI	TTAA	5 cut(s)	758, 1137, 2193, 2366, 2530
SatI	GCNGC	6 cut(s)	115, 390, 1311, 1524, 1857, 2184
Sau96I	GGNCC	3 cut(s)	450, 683, 1779
ScaI	AGTACT	1 cut(s)	2060
SchI	GAGTC	4 cut(s)	164, 942, 1796, 2477
ScrFI	CCNGG	6 cut(s)	303, 350, 941, 1265, 1336, 2054
SduI	GDGCHC	6 cut(s)	137, 804, 1283, 1657, 1925, 1991
SexAI	ACCWGGT	1 cut(s)	939
SfaNI	GCATC	4 cut(s)	202, 206, 517, 1183
SfcI	CTRYAG	1 cut(s)	1399
SfuI	TTCGAA	2 cut(s)	1547, 2495
SinI	GGWCC	2 cut(s)	450, 1779
SmiMI	CAYNNNNRTG	3 cut(s)	710, 957, 1884
SmlI	CTYRAG	2 cut(s)	1405, 2354
SmoI	CTYRAG	2 cut(s)	1405, 2354
SpeI	ACTAGT	1 cut(s)	2519
SspMI	CTAG	6 cut(s)	234, 1148, 1211, 2136, 2180, 2520
SstI	GAGCTC	2 cut(s)	137, 804
StyD4I	CCNGG	6 cut(s)	301, 348, 939, 1263, 1334, 2052
StyI	CCWWGG	4 cut(s)	1392, 1823, 1956, 2022
TaaI	ACNGT	6 cut(s)	1469, 1601, 1730, 1742, 2066, 2328
TaiI	ACGT	6 cut(s)	626, 675, 1095, 1463, 1554, 1917
TaqII	GACCGA	1 cut(s)	849
TatI	WGTACW	3 cut(s)	1581, 2058, 2097
TauI	GCSGC	3 cut(s)	117, 1526, 1859
TfiI	GAWTC	6 cut(s)	549, 666, 968, 1072, 1243, 1544
Tru1I	TTAA	5 cut(s)	758, 1137, 2193, 2366, 2530
Tru9I	TTAA	5 cut(s)	758, 1137, 2193, 2366, 2530
TscAI	CASTG	3 cut(s)	1888, 2413, 2445
TseFI	GTSAC	5 cut(s)	61, 382, 1644, 1730, 2509
TseI	GCWGC	3 cut(s)	389, 1310, 2183
Tsp45I	GTSAC	5 cut(s)	61, 382, 1644, 1730, 2509
TspGWI	ACGGA	6 cut(s)	370, 561, 1002, 1685, 2141, 2226
TspRI	CASTG	3 cut(s)	1888, 2413, 2445
VpaK11BI	GGWCC	2 cut(s)	450, 1779
XapI	RAATTY	8 cut(s)	176, 275, 311, 467, 741, 767, 1032, 2239
XceI	RCATGY	1 cut(s)	37
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1821
XmiI	GTMKAC	3 cut(s)	93, 477, 1298
XspI	CTAG	6 cut(s)	234, 1148, 1211, 2136, 2180, 2520
ZrmI	AGTACT	1 cut(s)	2060
Zsp2I	ATGCAT	1 cut(s)	2307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.