Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003410.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

17146 .. 19125

Gene Structure 1980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003410.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

atgactagacaaggaccagaaccttatgatttcatatcagaagcagcggagctccccctctcatctttctccacctacaatgaaaccaatgcgaatttggtcgacaccggcgcaaggtcatatccgatcgaaaacagcacagctctggagatggtgtaccgaatcaacgtcggcggaggccccatcttgccgaacgcagacaccggaatgtaccggaattggaccgccgacgaattatatttggatgaaataagtgaaaaattgagcgagcggccacagaacaatacaatcgagctcaatttcaccaaagttccagaatactctgccccaaaaccagtttacacaacaggtcggtcaatggggaggaacgaaaccaccaacaagagctataacctcacatgggtatttcccttagatcccaaattttattacctggtgagactccatttctgtgagtttgaatcttatattaccgattatggaggtcggtcgtttcaaatctacatggccaatcaaactgcagaaggacttgcagatgtcatcggatggagtggagctaatgggaatccagtttacagagactacgttgtgggcatgtttatgtctccggttgaaagccagaagaaagttaacctctttctagaacttgcagcgctacagagtgattattatactgttcaaaacagtgccatcttgaacgggctggaaatattcaagctcagtgactcaaatgggaatcttgccggacccaaccccgattcaaccacaagtaaatcacatacttctttgctgcccatcaaagttggtgtactctccggagtcctacttcttctctctggtattggaattttagttttcaggcgaggaaggaaagtcgaggagtctagttccagcccgggaatgttgaatctaccgtcccgtttgtgtcattacttttcactaccggagatcaaagccgccactcaaaacttcaactattctcgcatcattggagttggagggtttggccatgtgtacgaaggatttcttgaggatggggctacccatgttgcaatcaaacggctgaaagccatgtcgtcacaaggggcccgcgagtttaggacggaaatcgagatgctctctcgacttcgtcaccgccatttagtgtctcttattggatactgtgccgatgaaggtgagatgatcttggtgtatgattacatggcacgtgggactcttggtgaccatctctaccacactgataatccacctctttcgtgggaacaacggcttcatatttgtattggtgcggcgcaaggtttgcactatctacatacaggtactaagggcaccatcattcaccgtgatgtgaagagcacaaacatattattagatgagaaatgggtagccaaagtttcagattttgggttgtcgaagaatggcacaatcaccctttccaagacccacattagcacaaaggtgaagggtagttttggatatcttgaccctgaatactatcgacgtcaacaattgactgagaagtctgatgtgtactcatttggtgtgattttgtgcgaggtattgtctggaaggccagccgtgacaaccgtggacaataatcgagttggcctggctggatgggccaagaagtgtcatggtaatgggaaacttgatcaaattattgacccaaatttgaagggtaaaattgcagtgagatgcttacataaatttgtttccatcgcaatgcgttgcatggatgataatgggatcaatcggccgtcaatggacgatgttgtgagagagcttcaatttgcattgaagacgcaacaaaacaacgaggactatactgaccgcattgaaatgacagttcgagataggattgcatttatcaaggacaatgaagggtcttgttctagtgagcaaagtagtgggacgaatgaatccgtccaagggttgactggcacaatcttctccgagatcattgatccgattgggagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

659

Amino Acids

73.5

Weight (kDa)

6.1

Isoelectric Point (pI)

37.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1519
AatII	GACGTC	1 cut(s)	1504
AccB1I	GGYRCC	1 cut(s)	1328
AccBSI	CCGCTC	1 cut(s)	271
AccI	GTMKAC	1 cut(s)	102
AccII	CGCG	1 cut(s)	1092
AccIII	TCCGGA	1 cut(s)	815
AciI	CCGC	9 cut(s)	47, 174, 225, 271, 957, 1090, 1135, 1289, 1831
AclWI	GGATC	3 cut(s)	410, 1754, 1958
AcoI	YGGCCR	4 cut(s)	272, 507, 1006, 1754
AcsI	RAATTY	5 cut(s)	94, 422, 846, 1669, 1706
AcvI	CACGTG	1 cut(s)	1208
AcyI	GRCGYC	1 cut(s)	1501
AfaI	GTAC	6 cut(s)	158, 212, 810, 1016, 1321, 1532
AfeI	AGCGCT	1 cut(s)	654
AfiI	CCNNNNNNNGG	3 cut(s)	114, 400, 1929
AjnI	CCWGG	2 cut(s)	432, 1608
AleI	CACNNNNGTG	1 cut(s)	1457
AluBI	AGCT	7 cut(s)	52, 143, 295, 387, 557, 718, 1783
AluI	AGCT	7 cut(s)	52, 143, 295, 387, 557, 718, 1783
Alw21I	GWGCWC	3 cut(s)	54, 297, 1358
Alw26I	GTCTC	4 cut(s)	433, 573, 609, 1152
AlwI	GGATC	3 cut(s)	410, 1754, 1958
Ama87I	CYCGRG	1 cut(s)	895
Aor13HI	TCCGGA	1 cut(s)	815
Aor51HI	AGCGCT	1 cut(s)	654
AoxI	GGCC	9 cut(s)	178, 272, 507, 1006, 1086, 1571, 1606, 1620, 1754
ApaI	GGGCCC	1 cut(s)	1090
ApeKI	GCWGC	3 cut(s)	44, 650, 790
ApoI	RAATTY	5 cut(s)	94, 422, 846, 1669, 1706
Asp700I	GAANNNNTTC	1 cut(s)	1023
AspLEI	GCGC	3 cut(s)	113, 655, 1294
AspS9I	GGNCC	7 cut(s)	14, 179, 222, 746, 1086, 1087, 1620
AsuC2I	CCSGG	2 cut(s)	896, 897
AsuHPI	GGTGA	8 cut(s)	295, 448, 1124, 1187, 1232, 1331, 1420, 1471
AvaI	CYCGRG	1 cut(s)	895
AvaII	GGWCC	3 cut(s)	14, 222, 746
BaeGI	GKGCMC	2 cut(s)	1090, 1331
BalI	TGGCCA	2 cut(s)	509, 1008
BanI	GGYRCC	1 cut(s)	1328
BanII	GRGCYC	3 cut(s)	54, 297, 1090
BbrPI	CACGTG	1 cut(s)	1208
BbsI	GAAGAC	1 cut(s)	1805
Bbv12I	GWGCWC	3 cut(s)	54, 297, 1358
BbvI	GCAGC	3 cut(s)	56, 662, 777
BceAI	ACGGC	4 cut(s)	1076, 1283, 1562, 1741
BciT130I	CCWGG	2 cut(s)	434, 1610
BciVI	GTATCC	1 cut(s)	1151
BclI	TGATCA	1 cut(s)	1651
BcnI	CCSGG	2 cut(s)	896, 897
BcoDI	GTCTC	4 cut(s)	433, 573, 609, 1152
BfaI	CTAG	4 cut(s)	6, 641, 885, 1893
BfmI	CTRYAG	2 cut(s)	519, 656
BfoI	RGCGCY	1 cut(s)	656
BfuI	GTATCC	1 cut(s)	1151
BisI	GCNGC	6 cut(s)	45, 272, 651, 791, 957, 1290
BlsI	GCNGC	6 cut(s)	46, 273, 652, 792, 958, 1291
Bme1390I	CCNGG	4 cut(s)	434, 896, 897, 1610
Bme18I	GGWCC	3 cut(s)	14, 222, 746
BmeT110I	CYCGRG	1 cut(s)	895
BmgT120I	GGNCC	7 cut(s)	14, 179, 222, 746, 1086, 1087, 1620
BmiI	GGNNCC	5 cut(s)	181, 748, 1087, 1088, 1330
BmrFI	CCNGG	4 cut(s)	434, 896, 897, 1610
BmsI	GCATC	3 cut(s)	993, 1104, 1685
BpiI	GAAGAC	1 cut(s)	1805
BplI	GAGNNNNNCTC	2 cut(s)	1103, 1135
BpmI	CTGGAG	1 cut(s)	167
BpuEI	CTTGAG	1 cut(s)	1049
BpuMI	CCSGG	2 cut(s)	896, 897
BsaAI	YACGTR	1 cut(s)	1208
BsaHI	GRCGYC	1 cut(s)	1501
BsaJI	CCNNGG	3 cut(s)	895, 1587, 1927
BsaWI	WCCGGW	5 cut(s)	203, 213, 607, 815, 943
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bsc4I	CCNNNNNNNGG	3 cut(s)	114, 400, 1929
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	3 cut(s)	335, 569, 1942
Bse3DI	GCAATG	1 cut(s)	1728
BseAI	TCCGGA	1 cut(s)	815
BseBI	CCWGG	2 cut(s)	434, 1610
BseDI	CCNNGG	3 cut(s)	895, 1587, 1927
BseGI	GGATG	5 cut(s)	250, 551, 1039, 1622, 1741
BseLI	CCNNNNNNNGG	3 cut(s)	114, 400, 1929
BseMI	GCAATG	1 cut(s)	1728
BseMII	CTCAG	2 cut(s)	733, 1506
BseNI	ACTGG	3 cut(s)	335, 569, 1942
BseRI	GAGGAG	1 cut(s)	893
BseSI	GKGCMC	2 cut(s)	1090, 1331
BseX3I	CGGCCG	1 cut(s)	1754
BseXI	GCAGC	3 cut(s)	56, 662, 777
Bsh1236I	CGCG	1 cut(s)	1092
Bsh1285I	CGRYCG	3 cut(s)	129, 491, 1757
BshFI	GGCC	9 cut(s)	180, 274, 509, 1008, 1088, 1573, 1608, 1622, 1756
BshNI	GGYRCC	1 cut(s)	1328
BsiEI	CGRYCG	3 cut(s)	129, 491, 1757
BsiHKAI	GWGCWC	3 cut(s)	54, 297, 1358
BsiHKCI	CYCGRG	1 cut(s)	895
BsiSI	CCGG	8 cut(s)	108, 204, 214, 608, 744, 816, 896, 944
BslFI	GGGAC	3 cut(s)	901, 1225, 1924
BslI	CCNNNNNNNGG	3 cut(s)	114, 400, 1929
BsmAI	GTCTC	4 cut(s)	433, 573, 609, 1152
BsmFI	GGGAC	3 cut(s)	901, 1225, 1924
BsnI	GGCC	9 cut(s)	180, 274, 509, 1008, 1088, 1573, 1608, 1622, 1756
BsoBI	CYCGRG	1 cut(s)	895
Bsp120I	GGGCCC	1 cut(s)	1086
Bsp1286I	GDGCHC	5 cut(s)	54, 297, 1090, 1331, 1358
Bsp13I	TCCGGA	1 cut(s)	815
Bsp143I	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
BspACI	CCGC	9 cut(s)	47, 174, 225, 271, 957, 1090, 1135, 1289, 1831
BspANI	GGCC	9 cut(s)	180, 274, 509, 1008, 1088, 1573, 1608, 1622, 1756
BspCNI	CTCAG	2 cut(s)	732, 1507
BspEI	TCCGGA	1 cut(s)	815
BspFNI	CGCG	1 cut(s)	1092
BspLI	GGNNCC	5 cut(s)	181, 748, 1087, 1088, 1330
BspMAI	CTGCAG	1 cut(s)	523
BspPI	GGATC	3 cut(s)	410, 1754, 1958
BspQI	GCTCTTC	1 cut(s)	1346
BspT107I	GGYRCC	1 cut(s)	1328
BsrBI	CCGCTC	1 cut(s)	271
BsrDI	GCAATG	1 cut(s)	1728
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	3 cut(s)	335, 569, 1942
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	3 cut(s)	895, 1587, 1927
BssMI	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
BssNI	GRCGYC	1 cut(s)	1501
BssT1I	CCWWGG	1 cut(s)	1927
Bst2UI	CCWGG	2 cut(s)	434, 1610
Bst4CI	ACNGT	7 cut(s)	676, 686, 915, 1163, 1343, 1588, 1846
Bst6I	CTCTTC	1 cut(s)	1346
BstACI	GRCGYC	1 cut(s)	1501
BstAPI	GCANNNNNTGC	1 cut(s)	1300
BstBAI	YACGTR	1 cut(s)	1208
BstC8I	GCNNGC	3 cut(s)	269, 1090, 1575
BstDEI	CTNAG	4 cut(s)	412, 719, 1323, 1515
BstDSI	CCRYGG	1 cut(s)	1587
BstEII	GGTNACC	1 cut(s)	1220
BstF5I	GGATG	5 cut(s)	250, 551, 1039, 1622, 1741
BstFNI	CGCG	1 cut(s)	1092
BstH2I	RGCGCY	1 cut(s)	656
BstHHI	GCGC	3 cut(s)	113, 655, 1294
BstKTI	GATC	8 cut(s)	129, 418, 951, 1185, 1654, 1749, 1959, 1966
BstMAI	GTCTC	4 cut(s)	433, 573, 609, 1152
BstMBI	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
BstMCI	CGRYCG	3 cut(s)	129, 491, 1757
BstMWI	GCNNNNNNNGC	2 cut(s)	1300, 1619
BstNI	CCWGG	2 cut(s)	434, 1610
BstNSI	RCATGY	1 cut(s)	598
BstPI	GGTNACC	1 cut(s)	1220
BstSCI	CCNGG	4 cut(s)	432, 894, 895, 1608
BstSFI	CTRYAG	2 cut(s)	519, 656
BstSLI	GKGCMC	2 cut(s)	1090, 1331
BstUI	CGCG	1 cut(s)	1092
BstV1I	GCAGC	3 cut(s)	56, 662, 777
BstV2I	GAAGAC	1 cut(s)	1805
BstX2I	RGATCY	1 cut(s)	415
BstYI	RGATCY	1 cut(s)	415
BstZI	CGGCCG	1 cut(s)	1754
BsuI	GTATCC	1 cut(s)	1151
BsuRI	GGCC	9 cut(s)	180, 274, 509, 1008, 1088, 1573, 1608, 1622, 1756
BtgI	CCRYGG	1 cut(s)	1587
BtgZI	GCGATG	1 cut(s)	1702
BtsCI	GGATG	5 cut(s)	250, 551, 1039, 1622, 1741
BtsI	GCAGTG	1 cut(s)	1695
BtsIMutI	CAGTG	4 cut(s)	691, 727, 1236, 1695
Cac8I	GCNNGC	3 cut(s)	269, 1090, 1575
CfoI	GCGC	3 cut(s)	113, 655, 1294
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	7 cut(s)	14, 179, 222, 746, 1086, 1087, 1620
Cfr9I	CCCGGG	1 cut(s)	895
CseI	GACGC	1 cut(s)	1810
CsiI	ACCWGGT	1 cut(s)	432
Csp6I	GTAC	6 cut(s)	157, 211, 809, 1015, 1320, 1531
CviAII	CATG	9 cut(s)	399, 505, 595, 1010, 1046, 1072, 1201, 1634, 1732
CviQI	GTAC	6 cut(s)	157, 211, 809, 1015, 1320, 1531
DdeI	CTNAG	4 cut(s)	412, 719, 1323, 1515
DpnI	GATC	8 cut(s)	128, 417, 950, 1184, 1653, 1748, 1958, 1965
DpnII	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
DrdI	GACNNNNNNGTC	1 cut(s)	1519
DseDI	GACNNNNNNGTC	1 cut(s)	1519
EaeI	YGGCCR	4 cut(s)	272, 507, 1006, 1754
EagI	CGGCCG	1 cut(s)	1754
Eam1104I	CTCTTC	1 cut(s)	1346
EarI	CTCTTC	1 cut(s)	1346
EciI	GGCGGA	1 cut(s)	189
Ecl136II	GAGCTC	2 cut(s)	52, 295
EclXI	CGGCCG	1 cut(s)	1754
Eco130I	CCWWGG	1 cut(s)	1927
Eco24I	GRGCYC	3 cut(s)	54, 297, 1090
Eco32I	GATATC	1 cut(s)	1478
Eco47I	GGWCC	3 cut(s)	14, 222, 746
Eco47III	AGCGCT	1 cut(s)	654
Eco52I	CGGCCG	1 cut(s)	1754
Eco53kI	GAGCTC	2 cut(s)	52, 295
Eco72I	CACGTG	1 cut(s)	1208
Eco88I	CYCGRG	1 cut(s)	895
Eco91I	GGTNACC	1 cut(s)	1220
EcoICRI	GAGCTC	2 cut(s)	52, 295
EcoO109I	RGGNCCY	2 cut(s)	179, 1086
EcoO65I	GGTNACC	1 cut(s)	1220
EcoRII	CCWGG	2 cut(s)	432, 1608
EcoRV	GATATC	1 cut(s)	1478
EcoT14I	CCWWGG	1 cut(s)	1927
EcoT38I	GRGCYC	3 cut(s)	54, 297, 1090
ErhI	CCWWGG	1 cut(s)	1927
FaeI	CATG	9 cut(s)	402, 508, 598, 1013, 1049, 1075, 1204, 1637, 1735
FalI	AAGNNNNNCTT	2 cut(s)	1011, 1043
FaqI	GGGAC	3 cut(s)	901, 1225, 1924
FatI	CATG	9 cut(s)	398, 504, 594, 1009, 1045, 1071, 1200, 1633, 1731
FauI	CCCGC	1 cut(s)	1097
FbaI	TGATCA	1 cut(s)	1651
FblI	GTMKAC	1 cut(s)	102
Fnu4HI	GCNGC	6 cut(s)	45, 272, 651, 791, 957, 1290
FokI	GGATG	5 cut(s)	257, 558, 1046, 1629, 1748
FriOI	GRGCYC	3 cut(s)	54, 297, 1090
Fsp4HI	GCNGC	6 cut(s)	45, 272, 651, 791, 957, 1290
FspBI	CTAG	4 cut(s)	6, 641, 885, 1893
GlaI	GCGC	3 cut(s)	112, 654, 1293
GluI	GCNGC	6 cut(s)	45, 272, 651, 791, 957, 1290
GsuI	CTGGAG	1 cut(s)	167
HaeII	RGCGCY	1 cut(s)	656
HaeIII	GGCC	9 cut(s)	180, 274, 509, 1008, 1088, 1573, 1608, 1622, 1756
HapII	CCGG	8 cut(s)	108, 204, 214, 608, 744, 816, 896, 944
HgaI	GACGC	1 cut(s)	1810
HhaI	GCGC	3 cut(s)	113, 655, 1294
Hin1I	GRCGYC	1 cut(s)	1501
Hin1II	CATG	9 cut(s)	402, 508, 598, 1013, 1049, 1075, 1204, 1637, 1735
Hin6I	GCGC	3 cut(s)	111, 653, 1292
HinP1I	GCGC	3 cut(s)	111, 653, 1292
HincII	GTYRAC	4 cut(s)	103, 631, 1505, 1935
HindII	GTYRAC	4 cut(s)	103, 631, 1505, 1935
HpaI	GTTAAC	1 cut(s)	631
HpaII	CCGG	8 cut(s)	108, 204, 214, 608, 744, 816, 896, 944
HphI	GGTGA	8 cut(s)	295, 448, 1124, 1187, 1232, 1331, 1420, 1471
Hpy188I	TCNGA	7 cut(s)	40, 126, 545, 1399, 1525, 1954, 1968
Hpy99I	CGWCG	3 cut(s)	173, 233, 1503
HpyAV	CCTTC	8 cut(s)	518, 861, 1013, 1166, 1456, 1563, 1669, 1874
HpyCH4III	ACNGT	7 cut(s)	676, 686, 915, 1163, 1343, 1588, 1846
HpyCH4IV	ACGT	4 cut(s)	168, 585, 1207, 1501
HpyCH4V	TGCA	9 cut(s)	521, 533, 650, 1052, 1303, 1688, 1731, 1793, 1862
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1300, 1619
HpyF3I	CTNAG	4 cut(s)	412, 719, 1323, 1515
HpySE526I	ACGT	4 cut(s)	168, 585, 1207, 1501
Hsp92I	GRCGYC	1 cut(s)	1501
Hsp92II	CATG	9 cut(s)	402, 508, 598, 1013, 1049, 1075, 1204, 1637, 1735
HspAI	GCGC	3 cut(s)	111, 653, 1292
Kpn2I	TCCGGA	1 cut(s)	815
Ksp22I	TGATCA	1 cut(s)	1651
KspAI	GTTAAC	1 cut(s)	631
Kzo9I	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
LguI	GCTCTTC	1 cut(s)	1346
LmnI	GCTCC	3 cut(s)	49, 57, 554
Lsp1109I	GCAGC	3 cut(s)	56, 662, 777
LweI	GCATC	3 cut(s)	993, 1104, 1685
MabI	ACCWGGT	1 cut(s)	432
MaeI	CTAG	4 cut(s)	6, 641, 885, 1893
MaeII	ACGT	4 cut(s)	168, 585, 1207, 1501
MaeIII	GTNAC	5 cut(s)	722, 1077, 1130, 1220, 1579
MalI	GATC	8 cut(s)	128, 417, 950, 1184, 1653, 1748, 1958, 1965
MbiI	CCGCTC	1 cut(s)	271
MboI	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
MboII	GAAGA	6 cut(s)	634, 821, 1363, 1426, 1810, 1939
MfeI	CAATTG	1 cut(s)	1508
MflI	RGATCY	1 cut(s)	415
MhlI	GDGCHC	5 cut(s)	54, 297, 1090, 1331, 1358
MlsI	TGGCCA	2 cut(s)	509, 1008
MluNI	TGGCCA	2 cut(s)	509, 1008
MlyI	GAGTC	5 cut(s)	435, 719, 828, 890, 1207
MmeI	TCCRAC	1 cut(s)	976
Mox20I	TGGCCA	2 cut(s)	509, 1008
MroI	TCCGGA	1 cut(s)	815
MroXI	GAANNNNTTC	1 cut(s)	1023
MscI	TGGCCA	2 cut(s)	509, 1008
MseI	TTAA	1 cut(s)	630
MslI	CAYNNNNRTG	8 cut(s)	206, 450, 599, 1344, 1457, 1638, 1721, 1838
Msp20I	TGGCCA	2 cut(s)	509, 1008
MspA1I	CMGCKG	1 cut(s)	47
MspI	CCGG	8 cut(s)	108, 204, 214, 608, 744, 816, 896, 944
MspR9I	CCNGG	4 cut(s)	434, 896, 897, 1610
MunI	CAATTG	1 cut(s)	1508
MvaI	CCWGG	2 cut(s)	434, 1610
MvnI	CGCG	1 cut(s)	1092
MwoI	GCNNNNNNNGC	2 cut(s)	1300, 1619
NciI	CCSGG	2 cut(s)	896, 897
NdeII	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
NlaIII	CATG	9 cut(s)	402, 508, 598, 1013, 1049, 1075, 1204, 1637, 1735
NlaIV	GGNNCC	5 cut(s)	181, 748, 1087, 1088, 1330
NmuCI	GTSAC	5 cut(s)	722, 1077, 1130, 1220, 1579
NspI	RCATGY	1 cut(s)	598
OliI	CACNNNNGTG	1 cut(s)	1457
PciSI	GCTCTTC	1 cut(s)	1346
PdmI	GAANNNNTTC	1 cut(s)	1023
PfeI	GAWTC	7 cut(s)	162, 461, 565, 736, 758, 907, 1919
PflFI	GACNNNGTC	1 cut(s)	1128
PkrI	GCNGC	6 cut(s)	46, 273, 652, 792, 958, 1291
Ple19I	CGATCG	1 cut(s)	129
PleI	GAGTC	5 cut(s)	435, 719, 827, 889, 1207
PmaCI	CACGTG	1 cut(s)	1208
PmlI	CACGTG	1 cut(s)	1208
PpsI	GAGTC	5 cut(s)	435, 719, 827, 889, 1207
Ppu21I	YACGTR	1 cut(s)	1208
Psp124BI	GAGCTC	2 cut(s)	54, 297
Psp6I	CCWGG	2 cut(s)	432, 1608
PspCI	CACGTG	1 cut(s)	1208
PspEI	GGTNACC	1 cut(s)	1220
PspGI	CCWGG	2 cut(s)	432, 1608
PspN4I	GGNNCC	5 cut(s)	181, 748, 1087, 1088, 1330
PspOMI	GGGCCC	1 cut(s)	1086
PspPI	GGNCC	7 cut(s)	14, 179, 222, 746, 1086, 1087, 1620
PstI	CTGCAG	1 cut(s)	523
PsuI	RGATCY	1 cut(s)	415
PsyI	GACNNNGTC	1 cut(s)	1128
PvuI	CGATCG	1 cut(s)	129
RsaI	GTAC	6 cut(s)	158, 212, 810, 1016, 1321, 1532
RsaNI	GTAC	6 cut(s)	157, 211, 809, 1015, 1320, 1531
RseI	CAYNNNNRTG	8 cut(s)	206, 450, 599, 1344, 1457, 1638, 1721, 1838
SacI	GAGCTC	2 cut(s)	54, 297
SalI	GTCGAC	1 cut(s)	101
SapI	GCTCTTC	1 cut(s)	1346
SaqAI	TTAA	1 cut(s)	630
SatI	GCNGC	6 cut(s)	45, 272, 651, 791, 957, 1290
Sau3AI	GATC	8 cut(s)	126, 415, 948, 1182, 1651, 1746, 1956, 1963
Sau96I	GGNCC	7 cut(s)	14, 179, 222, 746, 1086, 1087, 1620
SchI	GAGTC	5 cut(s)	435, 719, 828, 890, 1207
ScrFI	CCNGG	4 cut(s)	434, 896, 897, 1610
SduI	GDGCHC	5 cut(s)	54, 297, 1090, 1331, 1358
SexAI	ACCWGGT	1 cut(s)	432
SfaNI	GCATC	3 cut(s)	993, 1104, 1685
SfcI	CTRYAG	2 cut(s)	519, 656
SgrAI	CRCCGGYG	1 cut(s)	107
SinI	GGWCC	3 cut(s)	14, 222, 746
SmaI	CCCGGG	1 cut(s)	897
SmiMI	CAYNNNNRTG	8 cut(s)	206, 450, 599, 1344, 1457, 1638, 1721, 1838
SmlI	CTYRAG	1 cut(s)	1028
SmoI	CTYRAG	1 cut(s)	1028
SsiI	CCGC	9 cut(s)	47, 174, 225, 271, 957, 1090, 1135, 1289, 1831
SspI	AATATT	1 cut(s)	711
SspMI	CTAG	4 cut(s)	6, 641, 885, 1893
SstI	GAGCTC	2 cut(s)	54, 297
StyD4I	CCNGG	4 cut(s)	432, 894, 895, 1608
StyI	CCWWGG	1 cut(s)	1927
TaaI	ACNGT	7 cut(s)	676, 686, 915, 1163, 1343, 1588, 1846
TaiI	ACGT	4 cut(s)	171, 588, 1210, 1504
TaqII	GACCGA	2 cut(s)	342, 477
TatI	WGTACW	2 cut(s)	808, 1530
TauI	GCSGC	3 cut(s)	274, 959, 1292
TfiI	GAWTC	7 cut(s)	162, 461, 565, 736, 758, 907, 1919
Tru1I	TTAA	1 cut(s)	630
Tru9I	TTAA	1 cut(s)	630
TscAI	CASTG	4 cut(s)	691, 727, 1243, 1695
TseFI	GTSAC	5 cut(s)	722, 1077, 1130, 1220, 1579
TseI	GCWGC	3 cut(s)	44, 650, 790
Tsp45I	GTSAC	5 cut(s)	722, 1077, 1130, 1220, 1579
TspDTI	ATGAA	7 cut(s)	22, 96, 261, 1185, 1262, 1893, 1932
TspGWI	ACGGA	2 cut(s)	1118, 1912
TspMI	CCCGGG	1 cut(s)	895
TspRI	CASTG	4 cut(s)	691, 727, 1243, 1695
Tth111I	GACNNNGTC	1 cut(s)	1128
VpaK11BI	GGWCC	3 cut(s)	14, 222, 746
XapI	RAATTY	5 cut(s)	94, 422, 846, 1669, 1706
XbaI	TCTAGA	1 cut(s)	640
XceI	RCATGY	1 cut(s)	598
XcmI	CCANNNNNNNNNTGG	3 cut(s)	94, 1254, 1934
XmaI	CCCGGG	1 cut(s)	895
XmiI	GTMKAC	1 cut(s)	102
XmnI	GAANNNNTTC	1 cut(s)	1023
XspI	CTAG	4 cut(s)	6, 641, 885, 1893
ZraI	GACGTC	1 cut(s)	1502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.