Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005425.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

10919 .. 15256

Gene Structure 4338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005425.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ctggtggccggagagtccacaaccatctacactccgactgatgatatcacacttaactgtggctcttccggccgcatggtcggtaactttgattttcgaacttggagtggagatatcaactcagagctttcccctatagaagttggtagcacatcccgagttttgaaagcaccaccgtcgtccttcacgggcaaccaagtaccgtacaccacagcacgactttctcactcggaattcaagtaccgatttcccgtcagaccgggccaaaagttcatccgcttgtacttctacccaggttcatacagtgccaacttcgaccgctccaagtctctcttctctgtcaaaacgggtggctacacccttctcaaggacttcaatgtttctatcagtgcagatgctgattatcttgagacaatgctcaaagaattctgtatttacattgagccagaacaacagatgctgaacatcacattcactcccagcaaagatggatacgcttttatcaacgggattgaaattatgtccatgcctgcctatctttaccacactgcagcccaagacgatgggccaagtattatcggcaacgaaaaccggaacgtcccagtgaaaaaccacacggctatggagatgatctatcgaatcaacgtcggcggaagtccagtctcaccgaatgaagacacgggcatgtaccgcacctgggattcaacggacgagatctacttaaataatccaagtagaactttgagcatattatcacaaagcaataatactcatctcaaatttgcaaaaataccgaactacactgcgccggtagacgtttaccgaaccggccggtcaatggaggtgaacagaaccatcagcaagagctacaatctcacctgggggtttcctgtagatccacaattttattacctggtgaggctccatttttgtgagattatttttagattggagagagatcgtgtgtttcagatttttatagccgaccaaccagcggaacagagagtggacataatccaatggagtggaggaaatgggattcccgtatatagagactaccttgtgttcgtgcccagtcttccaaacaagaagaaagttgacatctctgttgcactacaagcaaatcaagacgattcgaaaactcgatataatgatgcaatcttgaatgggctcgaaatcttcaaactgaatgacacaagcggaaatctcgccggacccaatcccgaccaaccgccggcggccgacaagatgaagccggaaagccaaagaaacccgaagaagaagtcgattcctatgcttgctatcattgccggcgtagtttccgtcttacttgttccttccctattggggtttttagttttcaggcgtacaagaaaactcaaggactccggctccagccacaggatgacgaaatcaatcaccaacattgggtcacatatcccgtcttatttgtgtcggtactttgcactggcagagatcatagccgccaccaaaaacttcgatgacactttcatcgttgggattggtgggtttggccacgtgtacaaaggacaattcgatgatggggccacccttgttgcaatcaaaaggcttaaagccacttctgcgcagggggcccacgagttcatgacggaaatcaagatgctctctgaactgcgccatcgtcatttggtgtctctgattggatattgtgctgatcaaggtgagatgcttttagtgtacgattacatgtcacgagggacccttagtgatcatttgcaccacatcgagaaaccgcatcttccttgggaacgacgacttcggatttgtatcggtgcagctcaaggtttgcactaccttcatacaggttccaaaggcaccatcattcaccgtgacgtaaagagcacaaacatattattagacgagaaatgggtagccaaggtttcagattttgggttgtcaaaaatgggcaatatcacaatatctaaaacccacattagcacgaaggtgaagggtagtttcggatatgttgaccctgattattaccggcgtcaacaattgactgagaagtctgacgtgtactcatttggcgtagtgttatgcgaagtattgtgtgggaggccagctgtgaccattgtggacaataatcgagttggcttggctggatgggccaaaaagtgtcatcgcaatgggcaatttgatcagattgttgacccaaatttgaagggtgaaattgcagtgcgatgcttgcataaatttgcttccattgcaatgagttgcttggatgataatgggatcaatcggccctcaatggatgatgttgtgagagggcttcagtttgcattgcagatgcaggaaaacaacgaggattatattgatcacattgaaaggacggttcaacatgagatttcattgatcacggacaatgaagggtcttgttctagtgtgcaaagcagtggggcgaacgaatccattcaagagttgactgggacaattttttctgagatcattgatccgaaatcgagccaaatgccagagaatagcaaattttgtaaagcccaaagaggaataagcactgcccacgcactgacggacgcagctagggacgagtgggggcagtgccccgagtcaaattttgatttttatcacctacaatcgtgctctctctccctccgtagcttattctacatcgctgccgactccagcgacggtggcggagctctccgccgccgactccatcccaatctactctctctccacccctccgtagcttattctacatcgctgccgactccagcgacggtggcggagctctcctccgccgactccatcccaatctaccctctctcactctctctctgcgtttcgactcagcctctgtatcttctcctgcgtcgtcgacgactcattaacgccagcaatggtggttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

969

Amino Acids

108.15

Weight (kDa)

7.85

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2047
Acc16I	TGCGCA	1 cut(s)	1608
AccB1I	GGYRCC	1 cut(s)	1856
AccBSI	CCGCTC	1 cut(s)	321
AccI	GTMKAC	2 cut(s)	813, 2878
AclWI	GGATC	3 cut(s)	890, 2282, 2486
AcoI	YGGCCR	5 cut(s)	6, 70, 829, 1239, 1534
AcsI	RAATTY	7 cut(s)	233, 425, 779, 2197, 2234, 2525, 2611
AcuI	CTGAAG	1 cut(s)	2297
AcvI	CACGTG	1 cut(s)	1540
AcyI	GRCGYC	1 cut(s)	2029
AfiI	CCNNNNNNNGG	8 cut(s)	367, 697, 838, 994, 1234, 1347, 1401, 1428
AflIII	ACRYGT	3 cut(s)	1539, 1728, 2055
AjiI	CACGTC	1 cut(s)	2056
AjnI	CCWGG	4 cut(s)	292, 695, 878, 912
AjuI	GAANNNNNNNTTGG	2 cut(s)	317, 349
AleI	CACNNNNGTG	1 cut(s)	1985
AluBI	AGCT	9 cut(s)	127, 867, 1820, 2105, 2579, 2658, 2699, 2750, 2791
AluI	AGCT	9 cut(s)	127, 867, 1820, 2105, 2579, 2658, 2699, 2750, 2791
Alw21I	GWGCWC	4 cut(s)	1886, 2642, 2701, 2793
Alw26I	GTCTC	5 cut(s)	333, 404, 667, 1047, 1680
AlwI	GGATC	3 cut(s)	890, 2282, 2486
AlwNI	CAGNNNCTG	3 cut(s)	398, 460, 2857
Ama87I	CYCGRG	2 cut(s)	156, 2603
ApaI	GGGCCC	1 cut(s)	1618
ApeKI	GCWGC	5 cut(s)	551, 1817, 2576, 2672, 2764
ApoI	RAATTY	7 cut(s)	233, 425, 779, 2197, 2234, 2525, 2611
ArsI	GACNNNNNNTTYG	4 cut(s)	1268, 1300, 1788, 1820
Asp700I	GAANNNNTTC	1 cut(s)	2451
AspLEI	GCGC	3 cut(s)	808, 1609, 1659
AspS9I	GGNCC	9 cut(s)	262, 566, 1214, 1566, 1614, 1615, 1740, 2148, 2283
AsuC2I	CCSGG	1 cut(s)	261
AsuII	TTCGAA	2 cut(s)	97, 1136
AvaI	CYCGRG	2 cut(s)	156, 2603
AvaII	GGWCC	2 cut(s)	1214, 1740
BaeGI	GKGCMC	3 cut(s)	1074, 1618, 2603
BalI	TGGCCA	1 cut(s)	1536
BanI	GGYRCC	1 cut(s)	1856
BanII	GRGCYC	4 cut(s)	1173, 1618, 2701, 2793
BauI	CACGAG	2 cut(s)	1619, 1734
BbrPI	CACGTG	1 cut(s)	1540
BbsI	GAAGAC	2 cut(s)	681, 1070
Bbv12I	GWGCWC	4 cut(s)	1886, 2642, 2701, 2793
BbvI	GCAGC	5 cut(s)	563, 1829, 2588, 2659, 2751
BceAI	ACGGC	1 cut(s)	633
BcgI	CGANNNNNNTGC	6 cut(s)	159, 193, 1276, 1310, 2491, 2525
BciT130I	CCWGG	4 cut(s)	294, 697, 880, 914
BciVI	GTATCC	1 cut(s)	485
BclI	TGATCA	5 cut(s)	1696, 1750, 2179, 2356, 2394
BcnI	CCSGG	1 cut(s)	261
BcoDI	GTCTC	5 cut(s)	333, 404, 667, 1047, 1680
BfaI	CTAG	2 cut(s)	2421, 2580
BfmI	CTRYAG	3 cut(s)	135, 549, 891
BfuI	GTATCC	1 cut(s)	485
BglII	AGATCT	1 cut(s)	714
BisI	GCNGC	9 cut(s)	73, 552, 1239, 1485, 1818, 2577, 2673, 2707, 2765
BlsI	GCNGC	9 cut(s)	74, 553, 1240, 1486, 1819, 2578, 2674, 2708, 2766
Bme1390I	CCNGG	5 cut(s)	261, 294, 697, 880, 914
Bme18I	GGWCC	2 cut(s)	1214, 1740
BmeT110I	CYCGRG	2 cut(s)	156, 2603
BmgBI	CACGTC	1 cut(s)	2056
BmgT120I	GGNCC	9 cut(s)	262, 566, 1214, 1566, 1614, 1615, 1740, 2148, 2283
BmrFI	CCNGG	5 cut(s)	261, 294, 697, 880, 914
BmrI	ACTGGG	3 cut(s)	596, 1068, 2475
BmsI	GCATC	8 cut(s)	385, 447, 1144, 1632, 1698, 1786, 2213, 2319
BmuI	ACTGGG	3 cut(s)	596, 1068, 2475
BpiI	GAAGAC	2 cut(s)	681, 1070
BplI	GAGNNNNNCTC	2 cut(s)	2780, 2812
BpmI	CTGGAG	3 cut(s)	1378, 2665, 2757
Bpu14I	TTCGAA	2 cut(s)	97, 1136
BpuEI	CTTGAG	4 cut(s)	350, 428, 1364, 1806
BpuMI	CCSGG	1 cut(s)	261
BsaAI	YACGTR	1 cut(s)	1540
BsaBI	GATNNNNATC	2 cut(s)	1808, 2622
BsaHI	GRCGYC	1 cut(s)	2029
BsaJI	CCNNGG	5 cut(s)	292, 696, 879, 1784, 1917
BsaWI	WCCGGW	1 cut(s)	591
BsaXI	ACNNNNNCTCC	6 cut(s)	460, 490, 1376, 1406, 2718, 2748
Bsc4I	CCNNNNNNNGG	8 cut(s)	367, 697, 838, 994, 1234, 1347, 1401, 1428
Bse118I	RCCGGY	6 cut(s)	808, 827, 831, 1234, 1310, 2025
Bse1I	ACTGG	5 cut(s)	602, 659, 1074, 1473, 2470
Bse3DI	GCAATG	6 cut(s)	1305, 2173, 2244, 2256, 2321, 2905
Bse8I	GATNNNNATC	2 cut(s)	1808, 2622
BseBI	CCWGG	4 cut(s)	294, 697, 880, 914
BseDI	CCNNGG	5 cut(s)	292, 696, 879, 1784, 1917
BseGI	GGATG	8 cut(s)	152, 273, 1410, 2150, 2269, 2299, 2716, 2808
BseJI	GATNNNNATC	2 cut(s)	1808, 2622
BseLI	CCNNNNNNNGG	8 cut(s)	367, 697, 838, 994, 1234, 1347, 1401, 1428
BseMI	GCAATG	6 cut(s)	1305, 2173, 2244, 2256, 2321, 2905
BseMII	CTCAG	4 cut(s)	135, 2034, 2472, 2864
BseNI	ACTGG	5 cut(s)	602, 659, 1074, 1473, 2470
BseRI	GAGGAG	1 cut(s)	2785
BseSI	GKGCMC	3 cut(s)	1074, 1618, 2603
BseX3I	CGGCCG	3 cut(s)	70, 829, 1239
BseXI	GCAGC	5 cut(s)	563, 1829, 2588, 2659, 2751
BseYI	CCCAGC	1 cut(s)	479
BsgI	GTGCAG	2 cut(s)	411, 1836
Bsh1285I	CGRYCG	4 cut(s)	73, 319, 832, 1242
BshNI	GGYRCC	1 cut(s)	1856
BsiEI	CGRYCG	4 cut(s)	73, 319, 832, 1242
BsiHKAI	GWGCWC	4 cut(s)	1886, 2642, 2701, 2793
BsiHKCI	CYCGRG	2 cut(s)	156, 2603
BslFI	GGGAC	4 cut(s)	584, 1753, 2482, 2597
BslI	CCNNNNNNNGG	8 cut(s)	367, 697, 838, 994, 1234, 1347, 1401, 1428
BsmAI	GTCTC	5 cut(s)	333, 404, 667, 1047, 1680
BsmFI	GGGAC	4 cut(s)	584, 1753, 2482, 2597
BsoBI	CYCGRG	2 cut(s)	156, 2603
Bsp119I	TTCGAA	2 cut(s)	97, 1136
Bsp120I	GGGCCC	1 cut(s)	1614
Bsp1286I	GDGCHC	8 cut(s)	1074, 1173, 1618, 1886, 2603, 2642, 2701, 2793
Bsp1407I	TGTACA	1 cut(s)	1542
BspCNI	CTCAG	4 cut(s)	134, 2035, 2473, 2863
BspHI	TCATGA	1 cut(s)	1626
BspMAI	CTGCAG	1 cut(s)	553
BspPI	GGATC	3 cut(s)	890, 2282, 2486
BspQI	GCTCTTC	1 cut(s)	70
BspT104I	TTCGAA	2 cut(s)	97, 1136
BspT107I	GGYRCC	1 cut(s)	1856
BsrBI	CCGCTC	1 cut(s)	321
BsrDI	GCAATG	6 cut(s)	1305, 2173, 2244, 2256, 2321, 2905
BsrFI	RCCGGY	6 cut(s)	808, 827, 831, 1234, 1310, 2025
BsrGI	TGTACA	1 cut(s)	1542
BsrI	ACTGG	5 cut(s)	602, 659, 1074, 1473, 2470
BssAI	RCCGGY	6 cut(s)	808, 827, 831, 1234, 1310, 2025
BssECI	CCNNGG	5 cut(s)	292, 696, 879, 1784, 1917
BssNI	GRCGYC	1 cut(s)	2029
BssSI	CACGAG	2 cut(s)	1619, 1734
BssT1I	CCWWGG	2 cut(s)	1784, 1917
Bst2BI	CACGAG	2 cut(s)	1619, 1734
Bst2UI	CCWGG	4 cut(s)	294, 697, 880, 914
Bst4CI	ACNGT	8 cut(s)	59, 177, 204, 305, 1871, 2374, 2690, 2782
Bst6I	CTCTTC	2 cut(s)	70, 338
BstACI	GRCGYC	1 cut(s)	2029
BstAUI	TGTACA	1 cut(s)	1542
BstBAI	YACGTR	1 cut(s)	1540
BstBI	TTCGAA	2 cut(s)	97, 1136
BstC8I	GCNNGC	7 cut(s)	531, 1236, 1299, 1312, 2103, 2228, 2896
BstDEI	CTNAG	5 cut(s)	121, 1745, 2043, 2481, 2850
BstENI	CCTNNNNNAGG	1 cut(s)	365
BstF5I	GGATG	8 cut(s)	152, 273, 1410, 2150, 2269, 2299, 2716, 2808
BstHHI	GCGC	3 cut(s)	808, 1609, 1659
BstMAI	GTCTC	5 cut(s)	333, 404, 667, 1047, 1680
BstMCI	CGRYCG	4 cut(s)	73, 319, 832, 1242
BstNI	CCWGG	4 cut(s)	294, 697, 880, 914
BstNSI	RCATGY	2 cut(s)	688, 1732
BstSCI	CCNGG	5 cut(s)	259, 292, 695, 878, 912
BstSFI	CTRYAG	3 cut(s)	135, 549, 891
BstSLI	GKGCMC	3 cut(s)	1074, 1618, 2603
BstV1I	GCAGC	5 cut(s)	563, 1829, 2588, 2659, 2751
BstV2I	GAAGAC	2 cut(s)	681, 1070
BstX2I	RGATCY	2 cut(s)	714, 895
BstXI	CCANNNNNNTGG	2 cut(s)	563, 1025
BstYI	RGATCY	2 cut(s)	714, 895
BstZI	CGGCCG	3 cut(s)	70, 829, 1239
BsuI	GTATCC	1 cut(s)	485
BtgZI	GCGATG	4 cut(s)	2147, 2236, 2653, 2745
BtrI	CACGTC	1 cut(s)	2056
BtsCI	GGATG	8 cut(s)	152, 273, 1410, 2150, 2269, 2299, 2716, 2808
BtsI	GCAGTG	6 cut(s)	546, 801, 2223, 2440, 2553, 2603
Cac8I	GCNNGC	7 cut(s)	531, 1236, 1299, 1312, 2103, 2228, 2896
CaiI	CAGNNNCTG	3 cut(s)	398, 460, 2857
CciI	TCATGA	1 cut(s)	1626
CfoI	GCGC	3 cut(s)	808, 1609, 1659
Cfr10I	RCCGGY	6 cut(s)	808, 827, 831, 1234, 1310, 2025
Cfr13I	GGNCC	9 cut(s)	262, 566, 1214, 1566, 1614, 1615, 1740, 2148, 2283
CseI	GACGC	3 cut(s)	2018, 2582, 2861
CsiI	ACCWGGT	1 cut(s)	912
CspCI	CAANNNNNGTGG	4 cut(s)	331, 366, 1558, 1593
CviAII	CATG	6 cut(s)	76, 526, 685, 1627, 1729, 2381
DdeI	CTNAG	5 cut(s)	121, 1745, 2043, 2481, 2850
DrdI	GACNNNNNNGTC	1 cut(s)	2047
DseDI	GACNNNNNNGTC	1 cut(s)	2047
EaeI	YGGCCR	5 cut(s)	6, 70, 829, 1239, 1534
EagI	CGGCCG	3 cut(s)	70, 829, 1239
Eam1104I	CTCTTC	2 cut(s)	70, 338
EarI	CTCTTC	2 cut(s)	70, 338
EciI	GGCGGA	5 cut(s)	666, 2693, 2709, 2788, 2801
Ecl136II	GAGCTC	2 cut(s)	2699, 2791
EclXI	CGGCCG	3 cut(s)	70, 829, 1239
Eco130I	CCWWGG	2 cut(s)	1784, 1917
Eco24I	GRGCYC	4 cut(s)	1173, 1618, 2701, 2793
Eco32I	GATATC	2 cut(s)	46, 115
Eco47I	GGWCC	2 cut(s)	1214, 1740
Eco52I	CGGCCG	3 cut(s)	70, 829, 1239
Eco53kI	GAGCTC	2 cut(s)	2699, 2791
Eco57I	CTGAAG	1 cut(s)	2297
Eco72I	CACGTG	1 cut(s)	1540
Eco88I	CYCGRG	2 cut(s)	156, 2603
EcoICRI	GAGCTC	2 cut(s)	2699, 2791
EcoNI	CCTNNNNNAGG	1 cut(s)	365
EcoO109I	RGGNCCY	2 cut(s)	1614, 1740
EcoRI	GAATTC	2 cut(s)	233, 425
EcoRII	CCWGG	4 cut(s)	292, 695, 878, 912
EcoRV	GATATC	2 cut(s)	46, 115
EcoT14I	CCWWGG	2 cut(s)	1784, 1917
EcoT38I	GRGCYC	4 cut(s)	1173, 1618, 2701, 2793
ErhI	CCWWGG	2 cut(s)	1784, 1917
FaeI	CATG	6 cut(s)	79, 529, 688, 1630, 1732, 2384
FalI	AAGNNNNNCTT	4 cut(s)	317, 349, 724, 756
FaqI	GGGAC	4 cut(s)	584, 1753, 2482, 2597
FatI	CATG	6 cut(s)	75, 525, 684, 1626, 1728, 2380
FbaI	TGATCA	5 cut(s)	1696, 1750, 2179, 2356, 2394
FblI	GTMKAC	2 cut(s)	813, 2878
Fnu4HI	GCNGC	9 cut(s)	73, 552, 1239, 1485, 1818, 2577, 2673, 2707, 2765
FokI	GGATG	8 cut(s)	139, 260, 1417, 2157, 2276, 2306, 2703, 2795
FriOI	GRGCYC	4 cut(s)	1173, 1618, 2701, 2793
Fsp4HI	GCNGC	9 cut(s)	73, 552, 1239, 1485, 1818, 2577, 2673, 2707, 2765
FspBI	CTAG	2 cut(s)	2421, 2580
FspI	TGCGCA	1 cut(s)	1608
GlaI	GCGC	3 cut(s)	807, 1608, 1658
GluI	GCNGC	9 cut(s)	73, 552, 1239, 1485, 1818, 2577, 2673, 2707, 2765
GsaI	CCCAGC	1 cut(s)	483
GsuI	CTGGAG	3 cut(s)	1378, 2665, 2757
HgaI	GACGC	3 cut(s)	2018, 2582, 2861
HhaI	GCGC	3 cut(s)	808, 1609, 1659
Hin1I	GRCGYC	1 cut(s)	2029
Hin1II	CATG	6 cut(s)	79, 529, 688, 1630, 1732, 2384
Hin6I	GCGC	3 cut(s)	806, 1607, 1657
HinP1I	GCGC	3 cut(s)	806, 1607, 1657
HincII	GTYRAC	6 cut(s)	1099, 2011, 2033, 2191, 2463, 2879
HindII	GTYRAC	6 cut(s)	1099, 2011, 2033, 2191, 2463, 2879
Hpy99I	CGWCG	8 cut(s)	181, 650, 1797, 2690, 2782, 2877, 2880, 2883
HpyAV	CCTTC	8 cut(s)	193, 371, 1347, 1847, 1978, 1984, 2197, 2402
HpyCH4III	ACNGT	8 cut(s)	59, 177, 204, 305, 1871, 2374, 2690, 2782
HpyCH4IV	ACGT	6 cut(s)	597, 645, 816, 1539, 1875, 2055
HpyF3I	CTNAG	5 cut(s)	121, 1745, 2043, 2481, 2850
HpySE526I	ACGT	6 cut(s)	597, 645, 816, 1539, 1875, 2055
Hsp92I	GRCGYC	1 cut(s)	2029
Hsp92II	CATG	6 cut(s)	79, 529, 688, 1630, 1732, 2384
HspAI	GCGC	3 cut(s)	806, 1607, 1657
KflI	GGGWCCC	1 cut(s)	1740
KroI	GCCGGC	2 cut(s)	1234, 1310
KroNI	GCCGGC	2 cut(s)	1236, 1312
Ksp22I	TGATCA	5 cut(s)	1696, 1750, 2179, 2356, 2394
LguI	GCTCTTC	1 cut(s)	70
LmnI	GCTCC	5 cut(s)	326, 927, 1397, 2696, 2788
Lsp1109I	GCAGC	5 cut(s)	563, 1829, 2588, 2659, 2751
LweI	GCATC	8 cut(s)	385, 447, 1144, 1632, 1698, 1786, 2213, 2319
MabI	ACCWGGT	1 cut(s)	912
MaeI	CTAG	2 cut(s)	2421, 2580
MaeII	ACGT	6 cut(s)	597, 645, 816, 1539, 1875, 2055
MaeIII	GTNAC	5 cut(s)	83, 1431, 1731, 1871, 2107
MbiI	CCGCTC	1 cut(s)	321
MfeI	CAATTG	1 cut(s)	2036
MflI	RGATCY	2 cut(s)	714, 895
MhlI	GDGCHC	8 cut(s)	1074, 1173, 1618, 1886, 2603, 2642, 2701, 2793
MlsI	TGGCCA	1 cut(s)	1536
MluNI	TGGCCA	1 cut(s)	1536
MlyI	GAGTC	9 cut(s)	23, 1379, 2615, 2672, 2706, 2764, 2798, 2842, 2877
MmeI	TCCRAC	1 cut(s)	59
Mox20I	TGGCCA	1 cut(s)	1536
MreI	CGCCGGCG	1 cut(s)	1234
MroNI	GCCGGC	2 cut(s)	1234, 1310
MroXI	GAANNNNTTC	1 cut(s)	2451
MscI	TGGCCA	1 cut(s)	1536
MseI	TTAA	4 cut(s)	54, 722, 1593, 2889
MslI	CAYNNNNRTG	6 cut(s)	620, 683, 930, 1985, 2166, 2249
Msp20I	TGGCCA	1 cut(s)	1536
MspA1I	CMGCKG	2 cut(s)	995, 2105
MspR9I	CCNGG	5 cut(s)	261, 294, 697, 880, 914
MunI	CAATTG	1 cut(s)	2036
MvaI	CCWGG	4 cut(s)	294, 697, 880, 914
NaeI	GCCGGC	2 cut(s)	1236, 1312
NciI	CCSGG	1 cut(s)	261
NgoMIV	GCCGGC	2 cut(s)	1234, 1310
NlaIII	CATG	6 cut(s)	79, 529, 688, 1630, 1732, 2384
NmuCI	GTSAC	4 cut(s)	1431, 1731, 1871, 2107
NsbI	TGCGCA	1 cut(s)	1608
NspI	RCATGY	2 cut(s)	688, 1732
NspV	TTCGAA	2 cut(s)	97, 1136
OliI	CACNNNNGTG	1 cut(s)	1985
PagI	TCATGA	1 cut(s)	1626
PciI	ACATGT	1 cut(s)	1728
PciSI	GCTCTTC	1 cut(s)	70
PdiI	GCCGGC	2 cut(s)	1236, 1312
PdmI	GAANNNNTTC	1 cut(s)	2451
PfeI	GAWTC	6 cut(s)	639, 701, 1039, 1133, 1288, 2447
PkrI	GCNGC	9 cut(s)	74, 553, 1240, 1486, 1819, 2578, 2674, 2708, 2766
PleI	GAGTC	9 cut(s)	22, 1379, 2614, 2672, 2706, 2764, 2798, 2842, 2877
PmaCI	CACGTG	1 cut(s)	1540
PmlI	CACGTG	1 cut(s)	1540
PpsI	GAGTC	9 cut(s)	22, 1379, 2614, 2672, 2706, 2764, 2798, 2842, 2877
Ppu21I	YACGTR	1 cut(s)	1540
PpuMI	RGGWCCY	1 cut(s)	1740
PscI	ACATGT	1 cut(s)	1728
Psp124BI	GAGCTC	2 cut(s)	2701, 2793
Psp5II	RGGWCCY	1 cut(s)	1740
Psp6I	CCWGG	4 cut(s)	292, 695, 878, 912
PspCI	CACGTG	1 cut(s)	1540
PspFI	CCCAGC	1 cut(s)	479
PspGI	CCWGG	4 cut(s)	292, 695, 878, 912
PspOMI	GGGCCC	1 cut(s)	1614
PspPI	GGNCC	9 cut(s)	262, 566, 1214, 1566, 1614, 1615, 1740, 2148, 2283
PspPPI	RGGWCCY	1 cut(s)	1740
PstI	CTGCAG	1 cut(s)	553
PstNI	CAGNNNCTG	3 cut(s)	398, 460, 2857
PsuI	RGATCY	2 cut(s)	714, 895
PvuII	CAGCTG	1 cut(s)	2105
RseI	CAYNNNNRTG	6 cut(s)	620, 683, 930, 1985, 2166, 2249
SacI	GAGCTC	2 cut(s)	2701, 2793
SalI	GTCGAC	1 cut(s)	2877
SapI	GCTCTTC	1 cut(s)	70
SaqAI	TTAA	4 cut(s)	54, 722, 1593, 2889
SatI	GCNGC	9 cut(s)	73, 552, 1239, 1485, 1818, 2577, 2673, 2707, 2765
Sau96I	GGNCC	9 cut(s)	262, 566, 1214, 1566, 1614, 1615, 1740, 2148, 2283
SchI	GAGTC	9 cut(s)	23, 1379, 2615, 2672, 2706, 2764, 2798, 2842, 2877
ScrFI	CCNGG	5 cut(s)	261, 294, 697, 880, 914
SduI	GDGCHC	8 cut(s)	1074, 1173, 1618, 1886, 2603, 2642, 2701, 2793
SexAI	ACCWGGT	1 cut(s)	912
SfaNI	GCATC	8 cut(s)	385, 447, 1144, 1632, 1698, 1786, 2213, 2319
SfcI	CTRYAG	3 cut(s)	135, 549, 891
SfuI	TTCGAA	2 cut(s)	97, 1136
SgrAI	CRCCGGYG	1 cut(s)	1234
SgrDI	CGTCGACG	1 cut(s)	2877
SinI	GGWCC	2 cut(s)	1214, 1740
SmiMI	CAYNNNNRTG	6 cut(s)	620, 683, 930, 1985, 2166, 2249
SmlI	CTYRAG	4 cut(s)	365, 407, 1379, 1821
SmoI	CTYRAG	4 cut(s)	365, 407, 1379, 1821
SspMI	CTAG	2 cut(s)	2421, 2580
SstI	GAGCTC	2 cut(s)	2701, 2793
StyD4I	CCNGG	5 cut(s)	259, 292, 695, 878, 912
StyI	CCWWGG	2 cut(s)	1784, 1917
TaaI	ACNGT	8 cut(s)	59, 177, 204, 305, 1871, 2374, 2690, 2782
TaiI	ACGT	6 cut(s)	600, 648, 819, 1542, 1878, 2058
TatI	WGTACW	3 cut(s)	282, 1542, 2058
TauI	GCSGC	4 cut(s)	75, 1241, 1487, 2709
TfiI	GAWTC	6 cut(s)	639, 701, 1039, 1133, 1288, 2447
Tru1I	TTAA	4 cut(s)	54, 722, 1593, 2889
Tru9I	TTAA	4 cut(s)	54, 722, 1593, 2889
TseFI	GTSAC	4 cut(s)	1431, 1731, 1871, 2107
TseI	GCWGC	5 cut(s)	551, 1817, 2576, 2672, 2764
Tsp45I	GTSAC	4 cut(s)	1431, 1731, 1871, 2107
TspDTI	ATGAA	9 cut(s)	262, 288, 687, 1265, 1501, 1615, 1829, 2379, 2421
TspGWI	ACGGA	7 cut(s)	722, 1312, 1646, 2414, 2585, 2642, 2734
VpaK11BI	GGWCC	2 cut(s)	1214, 1740
XagI	CCTNNNNNAGG	1 cut(s)	365
XapI	RAATTY	7 cut(s)	233, 425, 779, 2197, 2234, 2525, 2611
XceI	RCATGY	2 cut(s)	688, 1732
XmiI	GTMKAC	2 cut(s)	813, 2878
XmnI	GAANNNNTTC	1 cut(s)	2451
XspI	CTAG	2 cut(s)	2421, 2580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.