receptor-like protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Malectin_like | PF12819 | 36 - 411 | 8.3e-34 | Malectin-like domain |
| Malectin | PF11721 | 224 - 367 | 9.6e-06 | Malectin domain |
| Pkinase | PF00069 | 526 - 792 | 1.3e-43 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 528 - 793 | 4.2e-48 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 4 cut(s) | 101, 1483, 2032, 2119 |
| Acc65I | GGTACC | 1 cut(s) | 1622 |
| AccB1I | GGYRCC | 3 cut(s) | 1622, 1685, 1886 |
| AccBSI | CCGCTC | 1 cut(s) | 1068 |
| AccI | GTMKAC | 3 cut(s) | 93, 1187, 1331 |
| AccII | CGCG | 3 cut(s) | 1821, 1892, 1894 |
| AclI | AACGTT | 1 cut(s) | 1584 |
| AclWI | GGATC | 3 cut(s) | 926, 2176, 2624 |
| AcoI | YGGCCR | 4 cut(s) | 124, 304, 1023, 1986 |
| AcsI | RAATTY | 5 cut(s) | 176, 275, 467, 613, 2272 |
| AcuI | CTGAAG | 1 cut(s) | 2454 |
| AcyI | GRCGYC | 2 cut(s) | 438, 691 |
| AdeI | CACNNNGTG | 1 cut(s) | 1685 |
| AfeI | AGCGCT | 1 cut(s) | 1170 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 258, 447, 733, 916, 1282, 1896, 2191 |
| AflIII | ACRYGT | 1 cut(s) | 1611 |
| AgeI | ACCGGT | 1 cut(s) | 65 |
| AhlI | ACTAGT | 1 cut(s) | 2552 |
| AjiI | CACGTC | 3 cut(s) | 1494, 1735, 1948 |
| AjnI | CCWGG | 1 cut(s) | 948 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 359, 391 |
| AleI | CACNNNNGTG | 1 cut(s) | 1917 |
| Alw21I | GWGCWC | 2 cut(s) | 813, 1958 |
| Alw26I | GTCTC | 8 cut(s) | 479, 490, 949, 1089, 1125, 1306, 1752, 1938 |
| AlwI | GGATC | 3 cut(s) | 926, 2176, 2624 |
| Ama87I | CYCGRG | 1 cut(s) | 1243 |
| Aor51HI | AGCGCT | 1 cut(s) | 1170 |
| AoxI | GGCC | 7 cut(s) | 124, 304, 449, 1023, 1422, 1986, 2171 |
| ApaI | GGGCCC | 1 cut(s) | 453 |
| ApeKI | GCWGC | 4 cut(s) | 1166, 1343, 1556, 2216 |
| ApoI | RAATTY | 5 cut(s) | 176, 275, 467, 613, 2272 |
| AsiGI | ACCGGT | 1 cut(s) | 65 |
| Asp718I | GGTACC | 1 cut(s) | 1622 |
| AspLEI | GCGC | 3 cut(s) | 1171, 1894, 2386 |
| AspS9I | GGNCC | 4 cut(s) | 449, 450, 1262, 1812 |
| AsuC2I | CCSGG | 4 cut(s) | 303, 350, 1369, 2446 |
| AsuII | TTCGAA | 1 cut(s) | 1580 |
| AsuNHI | GCTAGC | 1 cut(s) | 233 |
| AvaI | CYCGRG | 1 cut(s) | 1243 |
| AvaII | GGWCC | 2 cut(s) | 1262, 1812 |
| BaeGI | GKGCMC | 3 cut(s) | 453, 1690, 2024 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1606, 1639 |
| BalI | TGGCCA | 2 cut(s) | 1025, 1988 |
| BanI | GGYRCC | 3 cut(s) | 1622, 1685, 1886 |
| BanII | GRGCYC | 2 cut(s) | 453, 813 |
| BauI | CACGAG | 1 cut(s) | 1742 |
| BbsI | GAAGAC | 3 cut(s) | 717, 2520, 2605 |
| Bbv12I | GWGCWC | 2 cut(s) | 813, 1958 |
| BbvI | GCAGC | 4 cut(s) | 1178, 1355, 1568, 2203 |
| BccI | CCATC | 7 cut(s) | 658, 704, 899, 1214, 1312, 1634, 1746 |
| BceAI | ACGGC | 3 cut(s) | 205, 1498, 1676 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 204, 238, 2406, 2440 |
| BciT130I | CCWGG | 1 cut(s) | 950 |
| BclI | TGATCA | 1 cut(s) | 1932 |
| BcnI | CCSGG | 4 cut(s) | 303, 350, 1369, 2446 |
| BcoDI | GTCTC | 8 cut(s) | 479, 490, 949, 1089, 1125, 1306, 1752, 1938 |
| BcuI | ACTAGT | 1 cut(s) | 2552 |
| BfaI | CTAG | 7 cut(s) | 234, 1157, 1220, 2169, 2213, 2553, 2580 |
| BfmI | CTRYAG | 2 cut(s) | 1172, 1432 |
| BfoI | RGCGCY | 2 cut(s) | 1172, 2387 |
| BglII | AGATCT | 1 cut(s) | 2622 |
| BisI | GCNGC | 6 cut(s) | 394, 1167, 1344, 1557, 1890, 2217 |
| BlsI | GCNGC | 6 cut(s) | 395, 1168, 1345, 1558, 1891, 2218 |
| BmcAI | AGTACT | 1 cut(s) | 2093 |
| Bme1390I | CCNGG | 5 cut(s) | 303, 350, 950, 1369, 2446 |
| Bme18I | GGWCC | 2 cut(s) | 1262, 1812 |
| BmeT110I | CYCGRG | 1 cut(s) | 1243 |
| BmgBI | CACGTC | 3 cut(s) | 1494, 1735, 1948 |
| BmgT120I | GGNCC | 4 cut(s) | 449, 450, 1262, 1812 |
| BmiI | GGNNCC | 8 cut(s) | 451, 1264, 1624, 1687, 1813, 1814, 1888, 2527 |
| BmrFI | CCNGG | 5 cut(s) | 303, 350, 950, 1369, 2446 |
| BmrI | ACTGGG | 1 cut(s) | 1311 |
| BmsI | GCATC | 4 cut(s) | 206, 517, 1192, 2479 |
| BmtI | GCTAGC | 1 cut(s) | 237 |
| BmuI | ACTGGG | 1 cut(s) | 1311 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1245 |
| BpiI | GAAGAC | 3 cut(s) | 717, 2520, 2605 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 483, 515 |
| BpmI | CTGGAG | 1 cut(s) | 680 |
| Bpu14I | TTCGAA | 1 cut(s) | 1580 |
| BpuEI | CTTGAG | 2 cut(s) | 1423, 1712 |
| BpuMI | CCSGG | 4 cut(s) | 303, 350, 1369, 2446 |
| BsaHI | GRCGYC | 2 cut(s) | 438, 691 |
| BsaI | GGTCTC | 1 cut(s) | 1306 |
| BsaJI | CCNNGG | 6 cut(s) | 348, 601, 1425, 1856, 1989, 2055 |
| BsaWI | WCCGGW | 6 cut(s) | 65, 88, 716, 726, 1123, 1282 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 653, 683 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 258, 447, 733, 916, 1282, 1896, 2191 |
| Bse118I | RCCGGY | 3 cut(s) | 65, 389, 2173 |
| Bse1I | ACTGG | 4 cut(s) | 573, 1085, 1317, 1921 |
| BseBI | CCWGG | 1 cut(s) | 950 |
| BseDI | CCNNGG | 6 cut(s) | 348, 601, 1425, 1856, 1989, 2055 |
| BseGI | GGATG | 5 cut(s) | 45, 197, 315, 766, 885 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 258, 447, 733, 916, 1282, 1896, 2191 |
| BseMII | CTCAG | 2 cut(s) | 1249, 2106 |
| BseNI | ACTGG | 4 cut(s) | 573, 1085, 1317, 1921 |
| BseRI | GAGGAG | 2 cut(s) | 9, 395 |
| BseSI | GKGCMC | 3 cut(s) | 453, 1690, 2024 |
| BseXI | GCAGC | 4 cut(s) | 1178, 1355, 1568, 2203 |
| Bsh1236I | CGCG | 3 cut(s) | 1821, 1892, 1894 |
| Bsh1285I | CGRYCG | 2 cut(s) | 93, 2360 |
| BshFI | GGCC | 7 cut(s) | 126, 306, 451, 1025, 1424, 1988, 2173 |
| BshNI | GGYRCC | 3 cut(s) | 1622, 1685, 1886 |
| BshTI | ACCGGT | 1 cut(s) | 65 |
| BsiEI | CGRYCG | 2 cut(s) | 93, 2360 |
| BsiHKAI | GWGCWC | 2 cut(s) | 813, 1958 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1243 |
| BsiWI | CGTACG | 1 cut(s) | 531 |
| BslFI | GGGAC | 2 cut(s) | 227, 1825 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 258, 447, 733, 916, 1282, 1896, 2191 |
| BsmAI | GTCTC | 8 cut(s) | 479, 490, 949, 1089, 1125, 1306, 1752, 1938 |
| BsmBI | CGTCTC | 1 cut(s) | 1938 |
| BsmFI | GGGAC | 2 cut(s) | 227, 1825 |
| BsnI | GGCC | 7 cut(s) | 126, 306, 451, 1025, 1424, 1988, 2173 |
| Bso31I | GGTCTC | 1 cut(s) | 1306 |
| BsoBI | CYCGRG | 1 cut(s) | 1243 |
| Bsp119I | TTCGAA | 1 cut(s) | 1580 |
| Bsp120I | GGGCCC | 1 cut(s) | 449 |
| Bsp1286I | GDGCHC | 5 cut(s) | 453, 813, 1690, 1958, 2024 |
| Bsp1407I | TGTACA | 2 cut(s) | 1614, 1830 |
| Bsp19I | CCATGG | 1 cut(s) | 2055 |
| BspANI | GGCC | 7 cut(s) | 126, 306, 451, 1025, 1424, 1988, 2173 |
| BspCNI | CTCAG | 2 cut(s) | 1248, 2107 |
| BspFNI | CGCG | 3 cut(s) | 1821, 1892, 1894 |
| BspLI | GGNNCC | 8 cut(s) | 451, 1264, 1624, 1687, 1813, 1814, 1888, 2527 |
| BspOI | GCTAGC | 1 cut(s) | 237 |
| BspPI | GGATC | 3 cut(s) | 926, 2176, 2624 |
| BspQI | GCTCTTC | 1 cut(s) | 1946 |
| BspT104I | TTCGAA | 1 cut(s) | 1580 |
| BspT107I | GGYRCC | 3 cut(s) | 1622, 1685, 1886 |
| BspTNI | GGTCTC | 1 cut(s) | 1306 |
| BsrBI | CCGCTC | 1 cut(s) | 1068 |
| BsrFI | RCCGGY | 3 cut(s) | 65, 389, 2173 |
| BsrGI | TGTACA | 2 cut(s) | 1614, 1830 |
| BsrI | ACTGG | 4 cut(s) | 573, 1085, 1317, 1921 |
| BssAI | RCCGGY | 3 cut(s) | 65, 389, 2173 |
| BssECI | CCNNGG | 6 cut(s) | 348, 601, 1425, 1856, 1989, 2055 |
| BssNAI | GTATAC | 1 cut(s) | 1188 |
| BssNI | GRCGYC | 2 cut(s) | 438, 691 |
| BssSI | CACGAG | 1 cut(s) | 1742 |
| BssT1I | CCWWGG | 5 cut(s) | 601, 1425, 1856, 1989, 2055 |
| Bst1107I | GTATAC | 1 cut(s) | 1188 |
| Bst2BI | CACGAG | 1 cut(s) | 1742 |
| Bst2UI | CCWGG | 1 cut(s) | 950 |
| Bst4CI | ACNGT | 8 cut(s) | 1502, 1634, 1763, 1775, 2099, 2109, 2361, 2611 |
| Bst6I | CTCTTC | 6 cut(s) | 62, 380, 1304, 1405, 1857, 1946 |
| BstACI | GRCGYC | 2 cut(s) | 438, 691 |
| BstAUI | TGTACA | 2 cut(s) | 1614, 1830 |
| BstBI | TTCGAA | 1 cut(s) | 1580 |
| BstC8I | GCNNGC | 8 cut(s) | 235, 323, 391, 449, 592, 785, 1357, 2175 |
| BstDEI | CTNAG | 5 cut(s) | 928, 1235, 1482, 2037, 2115 |
| BstDSI | CCRYGG | 1 cut(s) | 2055 |
| BstEII | GGTNACC | 1 cut(s) | 2542 |
| BstF5I | GGATG | 5 cut(s) | 45, 197, 315, 766, 885 |
| BstFNI | CGCG | 3 cut(s) | 1821, 1892, 1894 |
| BstH2I | RGCGCY | 2 cut(s) | 1172, 2387 |
| BstHHI | GCGC | 3 cut(s) | 1171, 1894, 2386 |
| BstMAI | GTCTC | 8 cut(s) | 479, 490, 949, 1089, 1125, 1306, 1752, 1938 |
| BstMCI | CGRYCG | 2 cut(s) | 93, 2360 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 123, 848, 1352, 1519, 1900, 1994, 2174 |
| BstNI | CCWGG | 1 cut(s) | 950 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1245 |
| BstPI | GGTNACC | 1 cut(s) | 2542 |
| BstSCI | CCNGG | 5 cut(s) | 301, 348, 948, 1367, 2444 |
| BstSFI | CTRYAG | 2 cut(s) | 1172, 1432 |
| BstSLI | GKGCMC | 3 cut(s) | 453, 1690, 2024 |
| BstUI | CGCG | 3 cut(s) | 1821, 1892, 1894 |
| BstV1I | GCAGC | 4 cut(s) | 1178, 1355, 1568, 2203 |
| BstV2I | GAAGAC | 3 cut(s) | 717, 2520, 2605 |
| BstX2I | RGATCY | 2 cut(s) | 931, 2622 |
| BstYI | RGATCY | 2 cut(s) | 931, 2622 |
| BstZ17I | GTATAC | 1 cut(s) | 1188 |
| BsuRI | GGCC | 7 cut(s) | 126, 306, 451, 1025, 1424, 1988, 2173 |
| BtgI | CCRYGG | 1 cut(s) | 2055 |
| BtrI | CACGTC | 3 cut(s) | 1494, 1735, 1948 |
| BtsCI | GGATG | 5 cut(s) | 45, 197, 315, 766, 885 |
| BtsIMutI | CAGTG | 3 cut(s) | 1243, 1914, 2478 |
| Cac8I | GCNNGC | 8 cut(s) | 235, 323, 391, 449, 592, 785, 1357, 2175 |
| CfoI | GCGC | 3 cut(s) | 1171, 1894, 2386 |
| Cfr10I | RCCGGY | 3 cut(s) | 65, 389, 2173 |
| Cfr13I | GGNCC | 4 cut(s) | 449, 450, 1262, 1812 |
| CseI | GACGC | 4 cut(s) | 446, 699, 1626, 1718 |
| CsiI | ACCWGGT | 1 cut(s) | 948 |
| CspAI | ACCGGT | 1 cut(s) | 65 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1433, 1468, 1630, 1665 |
| DdeI | CTNAG | 5 cut(s) | 928, 1235, 1482, 2037, 2115 |
| DraIII | CACNNNGTG | 1 cut(s) | 1685 |
| DrdI | GACNNNNNNGTC | 4 cut(s) | 101, 1483, 2032, 2119 |
| DseDI | GACNNNNNNGTC | 4 cut(s) | 101, 1483, 2032, 2119 |
| EaeI | YGGCCR | 4 cut(s) | 124, 304, 1023, 1986 |
| Eam1104I | CTCTTC | 6 cut(s) | 62, 380, 1304, 1405, 1857, 1946 |
| EarI | CTCTTC | 6 cut(s) | 62, 380, 1304, 1405, 1857, 1946 |
| Ecl136II | GAGCTC | 1 cut(s) | 811 |
| Eco130I | CCWWGG | 5 cut(s) | 601, 1425, 1856, 1989, 2055 |
| Eco24I | GRGCYC | 2 cut(s) | 453, 813 |
| Eco31I | GGTCTC | 1 cut(s) | 1306 |
| Eco32I | GATATC | 1 cut(s) | 166 |
| Eco47I | GGWCC | 2 cut(s) | 1262, 1812 |
| Eco47III | AGCGCT | 1 cut(s) | 1170 |
| Eco53kI | GAGCTC | 1 cut(s) | 811 |
| Eco57I | CTGAAG | 1 cut(s) | 2454 |
| Eco88I | CYCGRG | 1 cut(s) | 1243 |
| Eco91I | GGTNACC | 1 cut(s) | 2542 |
| EcoICRI | GAGCTC | 1 cut(s) | 811 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1812 |
| EcoO65I | GGTNACC | 1 cut(s) | 2542 |
| EcoRI | GAATTC | 1 cut(s) | 467 |
| EcoRII | CCWGG | 1 cut(s) | 948 |
| EcoRV | GATATC | 1 cut(s) | 166 |
| EcoT14I | CCWWGG | 5 cut(s) | 601, 1425, 1856, 1989, 2055 |
| EcoT38I | GRGCYC | 2 cut(s) | 453, 813 |
| ErhI | CCWWGG | 5 cut(s) | 601, 1425, 1856, 1989, 2055 |
| Esp3I | CGTCTC | 1 cut(s) | 1938 |
| FaqI | GGGAC | 2 cut(s) | 227, 1825 |
| FauI | CCCGC | 2 cut(s) | 440, 1592 |
| FbaI | TGATCA | 1 cut(s) | 1932 |
| FblI | GTMKAC | 3 cut(s) | 93, 1187, 1331 |
| Fnu4HI | GCNGC | 6 cut(s) | 394, 1167, 1344, 1557, 1890, 2217 |
| FokI | GGATG | 5 cut(s) | 32, 184, 302, 773, 892 |
| FriOI | GRGCYC | 2 cut(s) | 453, 813 |
| Fsp4HI | GCNGC | 6 cut(s) | 394, 1167, 1344, 1557, 1890, 2217 |
| FspBI | CTAG | 7 cut(s) | 234, 1157, 1220, 2169, 2213, 2553, 2580 |
| GlaI | GCGC | 3 cut(s) | 1170, 1893, 2385 |
| GluI | GCNGC | 6 cut(s) | 394, 1167, 1344, 1557, 1890, 2217 |
| GsuI | CTGGAG | 1 cut(s) | 680 |
| HaeII | RGCGCY | 2 cut(s) | 1172, 2387 |
| HaeIII | GGCC | 7 cut(s) | 126, 306, 451, 1025, 1424, 1988, 2173 |
| HgaI | GACGC | 4 cut(s) | 446, 699, 1626, 1718 |
| HhaI | GCGC | 3 cut(s) | 1171, 1894, 2386 |
| Hin1I | GRCGYC | 2 cut(s) | 438, 691 |
| Hin6I | GCGC | 3 cut(s) | 1169, 1892, 2384 |
| HinP1I | GCGC | 3 cut(s) | 1169, 1892, 2384 |
| HincII | GTYRAC | 4 cut(s) | 94, 1147, 2105, 2112 |
| HindII | GTYRAC | 4 cut(s) | 94, 1147, 2105, 2112 |
| HpaI | GTTAAC | 1 cut(s) | 1147 |
| Hpy188III | TCNNGA | 9 cut(s) | 335, 484, 659, 830, 996, 1157, 1210, 1699, 2081 |
| Hpy99I | CGWCG | 4 cut(s) | 226, 440, 749, 2103 |
| HpyAV | CCTTC | 2 cut(s) | 1919, 2446 |
| HpyCH4III | ACNGT | 8 cut(s) | 1502, 1634, 1763, 1775, 2099, 2109, 2361, 2611 |
| HpyCH4IV | ACGT | 7 cut(s) | 681, 1101, 1493, 1584, 1611, 1734, 1947 |
| HpyCH4V | TGCA | 7 cut(s) | 215, 325, 1903, 2219, 2324, 2396, 2492 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 123, 848, 1352, 1519, 1900, 1994, 2174 |
| HpyF3I | CTNAG | 5 cut(s) | 928, 1235, 1482, 2037, 2115 |
| HpySE526I | ACGT | 7 cut(s) | 681, 1101, 1493, 1584, 1611, 1734, 1947 |
| Hsp92I | GRCGYC | 2 cut(s) | 438, 691 |
| HspAI | GCGC | 3 cut(s) | 1169, 1892, 2384 |
| KflI | GGGWCCC | 1 cut(s) | 1812 |
| KpnI | GGTACC | 1 cut(s) | 1626 |
| KroI | GCCGGC | 2 cut(s) | 389, 2173 |
| KroNI | GCCGGC | 2 cut(s) | 391, 2175 |
| Ksp22I | TGATCA | 1 cut(s) | 1932 |
| KspAI | GTTAAC | 1 cut(s) | 1147 |
| LguI | GCTCTTC | 1 cut(s) | 1946 |
| LmnI | GCTCC | 3 cut(s) | 275, 368, 1070 |
| Lsp1109I | GCAGC | 4 cut(s) | 1178, 1355, 1568, 2203 |
| LweI | GCATC | 4 cut(s) | 206, 517, 1192, 2479 |
| MabI | ACCWGGT | 1 cut(s) | 948 |
| MaeI | CTAG | 7 cut(s) | 234, 1157, 1220, 2169, 2213, 2553, 2580 |
| MaeII | ACGT | 7 cut(s) | 681, 1101, 1493, 1584, 1611, 1734, 1947 |
| MbiI | CCGCTC | 1 cut(s) | 1068 |
| MfeI | CAATTG | 1 cut(s) | 186 |
| MflI | RGATCY | 2 cut(s) | 931, 2622 |
| MhlI | GDGCHC | 5 cut(s) | 453, 813, 1690, 1958, 2024 |
| MlsI | TGGCCA | 2 cut(s) | 1025, 1988 |
| MluNI | TGGCCA | 2 cut(s) | 1025, 1988 |
| MlyI | GAGTC | 6 cut(s) | 164, 492, 951, 1255, 1682, 2510 |
| MmeI | TCCRAC | 5 cut(s) | 382, 390, 1108, 1229, 1950 |
| Mox20I | TGGCCA | 2 cut(s) | 1025, 1988 |
| MreI | CGCCGGCG | 1 cut(s) | 389 |
| MroNI | GCCGGC | 2 cut(s) | 389, 2173 |
| MscI | TGGCCA | 2 cut(s) | 1025, 1988 |
| MseI | TTAA | 6 cut(s) | 942, 1146, 2061, 2226, 2399, 2592 |
| MslI | CAYNNNNRTG | 3 cut(s) | 719, 966, 1917 |
| Msp20I | TGGCCA | 2 cut(s) | 1025, 1988 |
| MspA1I | CMGCKG | 1 cut(s) | 2192 |
| MspR9I | CCNGG | 5 cut(s) | 303, 350, 950, 1369, 2446 |
| MunI | CAATTG | 1 cut(s) | 186 |
| MvaI | CCWGG | 1 cut(s) | 950 |
| MvnI | CGCG | 3 cut(s) | 1821, 1892, 1894 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 123, 848, 1352, 1519, 1900, 1994, 2174 |
| NaeI | GCCGGC | 2 cut(s) | 391, 2175 |
| NciI | CCSGG | 4 cut(s) | 303, 350, 1369, 2446 |
| NcoI | CCATGG | 1 cut(s) | 2055 |
| NgoMIV | GCCGGC | 2 cut(s) | 389, 2173 |
| NheI | GCTAGC | 1 cut(s) | 233 |
| NlaIV | GGNNCC | 8 cut(s) | 451, 1264, 1624, 1687, 1813, 1814, 1888, 2527 |
| NmeAIII | GCCGAG | 1 cut(s) | 238 |
| NmuCI | GTSAC | 8 cut(s) | 61, 382, 427, 1238, 1677, 1730, 1763, 2542 |
| NspV | TTCGAA | 1 cut(s) | 1580 |
| OliI | CACNNNNGTG | 1 cut(s) | 1917 |
| PciSI | GCTCTTC | 1 cut(s) | 1946 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 99, 1740 |
| PdiI | GCCGGC | 2 cut(s) | 391, 2175 |
| Pfl23II | CGTACG | 1 cut(s) | 531 |
| PinAI | ACCGGT | 1 cut(s) | 65 |
| PkrI | GCNGC | 6 cut(s) | 395, 1168, 1345, 1558, 1891, 2218 |
| PleI | GAGTC | 6 cut(s) | 164, 492, 951, 1254, 1681, 2510 |
| PpsI | GAGTC | 6 cut(s) | 164, 492, 951, 1254, 1681, 2510 |
| PpuMI | RGGWCCY | 1 cut(s) | 1812 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1245 |
| Psp124BI | GAGCTC | 1 cut(s) | 813 |
| Psp1406I | AACGTT | 1 cut(s) | 1584 |
| Psp5II | RGGWCCY | 1 cut(s) | 1812 |
| Psp6I | CCWGG | 1 cut(s) | 948 |
| PspEI | GGTNACC | 1 cut(s) | 2542 |
| PspGI | CCWGG | 1 cut(s) | 948 |
| PspLI | CGTACG | 1 cut(s) | 531 |
| PspN4I | GGNNCC | 8 cut(s) | 451, 1264, 1624, 1687, 1813, 1814, 1888, 2527 |
| PspOMI | GGGCCC | 1 cut(s) | 449 |
| PspPI | GGNCC | 4 cut(s) | 449, 450, 1262, 1812 |
| PspPPI | RGGWCCY | 1 cut(s) | 1812 |
| PsuI | RGATCY | 2 cut(s) | 931, 2622 |
| RseI | CAYNNNNRTG | 3 cut(s) | 719, 966, 1917 |
| SacI | GAGCTC | 1 cut(s) | 813 |
| SalI | GTCGAC | 1 cut(s) | 92 |
| SapI | GCTCTTC | 1 cut(s) | 1946 |
| SaqAI | TTAA | 6 cut(s) | 942, 1146, 2061, 2226, 2399, 2592 |
| SatI | GCNGC | 6 cut(s) | 394, 1167, 1344, 1557, 1890, 2217 |
| Sau96I | GGNCC | 4 cut(s) | 449, 450, 1262, 1812 |
| ScaI | AGTACT | 1 cut(s) | 2093 |
| SchI | GAGTC | 6 cut(s) | 164, 492, 951, 1255, 1682, 2510 |
| ScrFI | CCNGG | 5 cut(s) | 303, 350, 950, 1369, 2446 |
| SduI | GDGCHC | 5 cut(s) | 453, 813, 1690, 1958, 2024 |
| SexAI | ACCWGGT | 1 cut(s) | 948 |
| SfaNI | GCATC | 4 cut(s) | 206, 517, 1192, 2479 |
| SfcI | CTRYAG | 2 cut(s) | 1172, 1432 |
| SfuI | TTCGAA | 1 cut(s) | 1580 |
| SgrAI | CRCCGGYG | 1 cut(s) | 389 |
| SinI | GGWCC | 2 cut(s) | 1262, 1812 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 719, 966, 1917 |
| SmlI | CTYRAG | 2 cut(s) | 1438, 1691 |
| SmoI | CTYRAG | 2 cut(s) | 1438, 1691 |
| SpeI | ACTAGT | 1 cut(s) | 2552 |
| SspI | AATATT | 1 cut(s) | 1045 |
| SspMI | CTAG | 7 cut(s) | 234, 1157, 1220, 2169, 2213, 2553, 2580 |
| SstI | GAGCTC | 1 cut(s) | 813 |
| StyD4I | CCNGG | 5 cut(s) | 301, 348, 948, 1367, 2444 |
| StyI | CCWWGG | 5 cut(s) | 601, 1425, 1856, 1989, 2055 |
| TaaI | ACNGT | 8 cut(s) | 1502, 1634, 1763, 1775, 2099, 2109, 2361, 2611 |
| TaiI | ACGT | 7 cut(s) | 684, 1104, 1496, 1587, 1614, 1737, 1950 |
| TaqII | GACCGA | 1 cut(s) | 858 |
| TatI | WGTACW | 4 cut(s) | 1614, 1830, 2091, 2130 |
| TauI | GCSGC | 2 cut(s) | 396, 1892 |
| Tru1I | TTAA | 6 cut(s) | 942, 1146, 2061, 2226, 2399, 2592 |
| Tru9I | TTAA | 6 cut(s) | 942, 1146, 2061, 2226, 2399, 2592 |
| TscAI | CASTG | 3 cut(s) | 1243, 1921, 2478 |
| TseFI | GTSAC | 8 cut(s) | 61, 382, 427, 1238, 1677, 1730, 1763, 2542 |
| TseI | GCWGC | 4 cut(s) | 1166, 1343, 1556, 2216 |
| Tsp45I | GTSAC | 8 cut(s) | 61, 382, 427, 1238, 1677, 1730, 1763, 2542 |
| TspGWI | ACGGA | 6 cut(s) | 415, 561, 1375, 1718, 2174, 2259 |
| TspRI | CASTG | 3 cut(s) | 1243, 1921, 2478 |
| VpaK11BI | GGWCC | 2 cut(s) | 1262, 1812 |
| XapI | RAATTY | 5 cut(s) | 176, 275, 467, 613, 2272 |
| XbaI | TCTAGA | 1 cut(s) | 1156 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1854, 1966 |
| XmiI | GTMKAC | 3 cut(s) | 93, 1187, 1331 |
| XspI | CTAG | 7 cut(s) | 234, 1157, 1220, 2169, 2213, 2553, 2580 |
| ZrmI | AGTACT | 1 cut(s) | 2093 |