Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

5070315 .. 5072080

Gene Structure 1766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1062300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGCTCTACCGAATAAACATCGGTGGACCACAAATCTTATTCACTCAAGACACTGGCATGTACCGCCGCTGGGATGGTTTGGAAGTGGAGATAAATTACTTACAGCCGCTAAGAAGTGTAAGCAGTCACCTACAAGAATTCGGTAGTCAACCTGACTTTGCAGTAATACCAGCATATGCGGCGCCAGAACAAGTTTACCAAACAGGCCTGTCGATTAGCGCGGAATCGGAACCAACCTGGAACATTGGGTACAACCTCACCTGGGACTTCCCTGTCGATTCCAAGTTTTCTTACCTTATTAGATTGCATTTTTGTAGTTGGCACGAACCCGGAGAAGAGTTTCAAATTTATATAGACAAGCAAACAGTTGAAGAAAGAGCAGACATTTTCTTCTGGACCTGTGATCGAGGCCATGGCCGTGGGATTCCTGTGTACAAAGATTACGTTGTGTCAATGGTTGGCCCTGAAAGCATGGGGAAGAAAACAAATCTTTCTATCGCACTGAAGGACAAGTACAACAAAGGAATATTATTGAATGGGCTCGAAATCTTCAAACTGAATGATTCAAATGGTAATCTCGGCGGACCGAACCATGTCCCAGCTCCATCCAAACCAGTGGAGTCGCAAAGCCCCCCAAATAATTCGTCAAAGAAGACGGTGTTTGAAATCGTTGCTGGTGAAGTTGCCGGCATACTTGTCCTGATCTTTATCCTCGGATTCTTGATTTTCCGACTACTATGGAAAGCCAAGTCCTCGGGCGCCAATTGCAGGACGACCAAGTCAACTATGACCTGCAGGTCAACTTTACCGTCTGATTTGTGTCCTTATCTGTCACTGAAAGATATCAAATCCGCCACCAAAAACTTCAACGACATGTGTATGATCGGAGTTGGAGGCTTTGGAAACGTATACAAAGGATGCATCAGTGAAGGCGAGACCACAACCGTTGCAATCAAACGGTTGAAACCCGAATCATCACAAGGGGCACACGAGTTCAAGACAGAAATCGAGCTGCTCTCCCAACTCCGCCACCGCCATTTGGTGTCTCTGATTGGATATTGTACGGATGAAGATGAGATGATCTTGGTATACGATTACATGGCACGTGGGACCCTCGCCAGCCATCTCTACCACACTAATAACCCACCTCTTTCCTGGGCGCAACGACTTCTGATTTGTATTGGAACGGCTCGTGGTCTGCACTACCTTCACTGTGGAACCAAGAGCACTATCATCCACCGTGACGTGAAGAGCACCAACATCTTGTTGGATGAGAAATGGGTGGCAAAGGTTTCGGATTTCGGCTTGTCAAAAATGGGAATGACTACCGCATCTAAGACCCACATGAGTACGATGGTCAAAGGCAGTTTCGGGTATCTGGACCCGGAATATTTCCGACTTCAGCAGCTAACTGTGAAGTCAGATGTGTACTCATTCGGTGTTGTGCTGTTTGAGGTTTTGTGTGGGAGACCCGCTCTAATGCATACGGTGGAGACAAGGCAAATGAGCTTAGCTGAGTGGACTAGGACTTGTCATGGAGACGGAACACTTGACCAAATCATTGATCCAAATTTGAAGGGTGAGATTGAAGTCAAGTGCTTGAATGTGTTCGTTGATATTGCTATGAGTTGCATACATGATAAAGGAATCGAACGGCCGTCAATGAACGACGTTGTTAATACCCTTGAGTCTGTGTTGCAGCTTCATCAGAGTTGCATTGAAAGGAATAGTCACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

580

Amino Acids

64.99

Weight (kDa)

6.56

Isoelectric Point (pI)

45.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	2 - 185	3.9e-08	Malectin-like domain
Pkinase	PF00069	292 - 560	7.9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	294 - 562	4.9e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	272, 778, 796
Acc36I	ACCTGC	2 cut(s)	786, 800
AccB1I	GGYRCC	2 cut(s)	181, 758
AccBSI	CCGCTC	1 cut(s)	1475
AccI	GTMKAC	2 cut(s)	909, 1089
AccII	CGCG	1 cut(s)	221
AclWI	GGATC	1 cut(s)	1559
AcoI	YGGCCR	2 cut(s)	415, 1655
AcsI	RAATTY	3 cut(s)	137, 345, 1570
AcuI	CTGAAG	2 cut(s)	524, 1385
AcvI	CACGTG	1 cut(s)	1106
AcyI	GRCGYC	2 cut(s)	182, 759
AfaI	GTAC	7 cut(s)	62, 251, 434, 515, 1063, 1351, 1430
AfiI	CCNNNNNNNGG	4 cut(s)	70, 262, 768, 1039
AflIII	ACRYGT	1 cut(s)	873
AjiI	CACGTC	1 cut(s)	1246
AjnI	CCWGG	3 cut(s)	236, 260, 1154
AluBI	AGCT	6 cut(s)	602, 1012, 1408, 1509, 1514, 1702
AluI	AGCT	6 cut(s)	602, 1012, 1408, 1509, 1514, 1702
Alw21I	GWGCWC	2 cut(s)	1229, 1256
Alw26I	GTCTC	5 cut(s)	929, 1050, 1462, 1487, 1533
AlwI	GGATC	1 cut(s)	1559
Ama87I	CYCGRG	1 cut(s)	754
AoxI	GGCC	5 cut(s)	205, 409, 415, 460, 1655
ApeKI	GCWGC	3 cut(s)	1012, 1405, 1699
ApoI	RAATTY	3 cut(s)	137, 345, 1570
ArsI	GACNNNNNNTTYG	4 cut(s)	629, 661, 1158, 1190
Asp700I	GAANNNNTTC	2 cut(s)	339, 1607
AspLEI	GCGC	4 cut(s)	184, 221, 761, 1162
AspS9I	GGNCC	6 cut(s)	26, 396, 461, 584, 1110, 1381
AsuC2I	CCSGG	2 cut(s)	330, 1385
AsuHPI	GGTGA	4 cut(s)	119, 250, 689, 1592
AvaI	CYCGRG	1 cut(s)	754
AvaII	GGWCC	5 cut(s)	26, 396, 584, 1110, 1381
BaeGI	GKGCMC	1 cut(s)	988
BanI	GGYRCC	2 cut(s)	181, 758
BanII	GRGCYC	1 cut(s)	543
BarI	GAAGNNNNNNTAC	2 cut(s)	497, 529
BauI	CACGAG	2 cut(s)	989, 1191
BbrPI	CACGTG	1 cut(s)	1106
BbsI	GAAGAC	1 cut(s)	659
Bbv12I	GWGCWC	2 cut(s)	1229, 1256
BbvI	GCAGC	3 cut(s)	999, 1417, 1711
BccI	CCATC	4 cut(s)	68, 613, 1131, 1348
BceAI	ACGGC	4 cut(s)	402, 1203, 1642, 1670
BcgI	CGANNNNNNTGC	2 cut(s)	1275, 1309
BciT130I	CCWGG	3 cut(s)	238, 262, 1156
BcnI	CCSGG	2 cut(s)	330, 1385
BcoDI	GTCTC	5 cut(s)	929, 1050, 1462, 1487, 1533
BfaI	CTAG	1 cut(s)	1524
BfmI	CTRYAG	1 cut(s)	793
BfoI	RGCGCY	2 cut(s)	185, 762
BfuAI	ACCTGC	2 cut(s)	786, 800
BisI	GCNGC	6 cut(s)	67, 107, 180, 1013, 1406, 1700
BlpI	GCTNAGC	1 cut(s)	1510
BlsI	GCNGC	6 cut(s)	68, 108, 181, 1014, 1407, 1701
Bme1390I	CCNGG	5 cut(s)	238, 262, 330, 1156, 1385
Bme18I	GGWCC	5 cut(s)	26, 396, 584, 1110, 1381
BmeT110I	CYCGRG	1 cut(s)	754
BmgBI	CACGTC	1 cut(s)	1246
BmgT120I	GGNCC	6 cut(s)	26, 396, 461, 584, 1110, 1381
BmiI	GGNNCC	7 cut(s)	183, 231, 760, 1111, 1112, 1219, 1383
BmrFI	CCNGG	5 cut(s)	238, 262, 330, 1156, 1385
BmsI	GCATC	3 cut(s)	908, 930, 1340
BpiI	GAAGAC	1 cut(s)	659
BplI	GAGNNNNNCTC	4 cut(s)	1001, 1033, 1459, 1491
Bpu1102I	GCTNAGC	1 cut(s)	1510
BpuEI	CTTGAG	2 cut(s)	30, 1706
BpuMI	CCSGG	2 cut(s)	330, 1385
BsaAI	YACGTR	1 cut(s)	1106
BsaBI	GATNNNNATC	1 cut(s)	707
BsaHI	GRCGYC	2 cut(s)	182, 759
BsaI	GGTCTC	2 cut(s)	929, 1462
BsaJI	CCNNGG	6 cut(s)	261, 412, 418, 712, 753, 1155
Bsc4I	CCNNNNNNNGG	4 cut(s)	70, 262, 768, 1039
Bse118I	RCCGGY	1 cut(s)	686
Bse1I	ACTGG	2 cut(s)	58, 614
Bse8I	GATNNNNATC	1 cut(s)	707
BseBI	CCWGG	3 cut(s)	238, 262, 1156
BseDI	CCNNGG	6 cut(s)	261, 412, 418, 712, 753, 1155
BseGI	GGATG	6 cut(s)	79, 605, 923, 1072, 1233, 1276
BseJI	GATNNNNATC	1 cut(s)	707
BseLI	CCNNNNNNNGG	4 cut(s)	70, 262, 768, 1039
BseMII	CTCAG	1 cut(s)	1506
BseNI	ACTGG	2 cut(s)	58, 614
BseSI	GKGCMC	1 cut(s)	988
BseX3I	CGGCCG	1 cut(s)	1655
BseXI	GCAGC	3 cut(s)	999, 1417, 1711
BseYI	CCCAGC	2 cut(s)	69, 598
BsgI	GTGCAG	1 cut(s)	1184
Bsh1236I	CGCG	1 cut(s)	221
Bsh1285I	CGRYCG	1 cut(s)	1658
BshFI	GGCC	5 cut(s)	207, 411, 417, 462, 1657
BshNI	GGYRCC	2 cut(s)	181, 758
BsiEI	CGRYCG	1 cut(s)	1658
BsiHKAI	GWGCWC	2 cut(s)	1229, 1256
BsiHKCI	CYCGRG	1 cut(s)	754
BsiSI	CCGG	3 cut(s)	330, 687, 1385
BslFI	GGGAC	3 cut(s)	278, 581, 1123
BslI	CCNNNNNNNGG	4 cut(s)	70, 262, 768, 1039
BsmAI	GTCTC	5 cut(s)	929, 1050, 1462, 1487, 1533
BsmBI	CGTCTC	1 cut(s)	1533
BsmFI	GGGAC	3 cut(s)	278, 581, 1123
BsnI	GGCC	5 cut(s)	207, 411, 417, 462, 1657
Bso31I	GGTCTC	2 cut(s)	929, 1462
BsoBI	CYCGRG	1 cut(s)	754
Bsp1286I	GDGCHC	4 cut(s)	543, 988, 1229, 1256
Bsp1407I	TGTACA	1 cut(s)	432
Bsp143I	GATC	5 cut(s)	403, 702, 882, 1080, 1564
Bsp1720I	GCTNAGC	1 cut(s)	1510
Bsp19I	CCATGG	1 cut(s)	412
BspANI	GGCC	5 cut(s)	207, 411, 417, 462, 1657
BspCNI	CTCAG	1 cut(s)	1507
BspFNI	CGCG	1 cut(s)	221
BspLI	GGNNCC	7 cut(s)	183, 231, 760, 1111, 1112, 1219, 1383
BspMAI	CTGCAG	1 cut(s)	797
BspMI	ACCTGC	2 cut(s)	786, 800
BspPI	GGATC	1 cut(s)	1559
BspQI	GCTCTTC	1 cut(s)	1244
BspT107I	GGYRCC	2 cut(s)	181, 758
BspTNI	GGTCTC	2 cut(s)	929, 1462
BsrBI	CCGCTC	1 cut(s)	1475
BsrFI	RCCGGY	1 cut(s)	686
BsrGI	TGTACA	1 cut(s)	432
BsrI	ACTGG	2 cut(s)	58, 614
BssAI	RCCGGY	1 cut(s)	686
BssECI	CCNNGG	6 cut(s)	261, 412, 418, 712, 753, 1155
BssMI	GATC	5 cut(s)	403, 702, 882, 1080, 1564
BssNAI	GTATAC	2 cut(s)	910, 1090
BssNI	GRCGYC	2 cut(s)	182, 759
BssSI	CACGAG	2 cut(s)	989, 1191
BssT1I	CCWWGG	1 cut(s)	412
Bst1107I	GTATAC	2 cut(s)	910, 1090
Bst2BI	CACGAG	2 cut(s)	989, 1191
Bst2UI	CCWGG	3 cut(s)	238, 262, 1156
Bst4CI	ACNGT	9 cut(s)	367, 658, 810, 946, 960, 1214, 1241, 1414, 1489
Bst6I	CTCTTC	2 cut(s)	330, 1244
BstACI	GRCGYC	2 cut(s)	182, 759
BstAUI	TGTACA	1 cut(s)	432
BstBAI	YACGTR	1 cut(s)	1106
BstC8I	GCNNGC	2 cut(s)	688, 1120
BstDEI	CTNAG	4 cut(s)	110, 1335, 1510, 1515
BstDSI	CCRYGG	2 cut(s)	412, 418
BstF5I	GGATG	6 cut(s)	79, 605, 923, 1072, 1233, 1276
BstFNI	CGCG	1 cut(s)	221
BstH2I	RGCGCY	2 cut(s)	185, 762
BstHHI	GCGC	4 cut(s)	184, 221, 761, 1162
BstKTI	GATC	5 cut(s)	406, 705, 885, 1083, 1567
BstMAI	GTCTC	5 cut(s)	929, 1050, 1462, 1487, 1533
BstMBI	GATC	5 cut(s)	403, 702, 882, 1080, 1564
BstMCI	CGRYCG	1 cut(s)	1658
BstMWI	GCNNNNNNNGC	4 cut(s)	63, 179, 468, 765
BstNI	CCWGG	3 cut(s)	238, 262, 1156
BstNSI	RCATGY	2 cut(s)	61, 877
BstSCI	CCNGG	5 cut(s)	236, 260, 328, 1154, 1383
BstSFI	CTRYAG	1 cut(s)	793
BstSLI	GKGCMC	1 cut(s)	988
BstUI	CGCG	1 cut(s)	221
BstV1I	GCAGC	3 cut(s)	999, 1417, 1711
BstV2I	GAAGAC	1 cut(s)	659
BstXI	CCANNNNNNTGG	2 cut(s)	419, 616
BstZ17I	GTATAC	2 cut(s)	910, 1090
BstZI	CGGCCG	1 cut(s)	1655
BsuRI	GGCC	5 cut(s)	207, 411, 417, 462, 1657
BtgI	CCRYGG	2 cut(s)	412, 418
BtrI	CACGTC	1 cut(s)	1246
BtsCI	GGATG	6 cut(s)	79, 605, 923, 1072, 1233, 1276
BtsIMutI	CAGTG	6 cut(s)	51, 500, 621, 833, 931, 1210
BveI	ACCTGC	2 cut(s)	786, 800
Cac8I	GCNNGC	2 cut(s)	688, 1120
CfoI	GCGC	4 cut(s)	184, 221, 761, 1162
Cfr10I	RCCGGY	1 cut(s)	686
Cfr13I	GGNCC	6 cut(s)	26, 396, 461, 584, 1110, 1381
CpoI	CGGWCCG	1 cut(s)	584
Csp6I	GTAC	7 cut(s)	61, 250, 433, 514, 1062, 1350, 1429
CspCI	CAANNNNNGTGG	2 cut(s)	928, 963
CspI	CGGWCCG	1 cut(s)	584
CviAII	CATG	9 cut(s)	58, 413, 472, 593, 874, 1099, 1345, 1535, 1637
CviQI	GTAC	7 cut(s)	61, 250, 433, 514, 1062, 1350, 1429
DdeI	CTNAG	4 cut(s)	110, 1335, 1510, 1515
DinI	GGCGCC	2 cut(s)	183, 760
DpnI	GATC	5 cut(s)	405, 704, 884, 1082, 1566
DpnII	GATC	5 cut(s)	403, 702, 882, 1080, 1564
DrdI	GACNNNNNNGTC	3 cut(s)	272, 778, 796
DseDI	GACNNNNNNGTC	3 cut(s)	272, 778, 796
EaeI	YGGCCR	2 cut(s)	415, 1655
EagI	CGGCCG	1 cut(s)	1655
Eam1104I	CTCTTC	2 cut(s)	330, 1244
EarI	CTCTTC	2 cut(s)	330, 1244
EciI	GGCGGA	3 cut(s)	597, 841, 1016
EclXI	CGGCCG	1 cut(s)	1655
Eco130I	CCWWGG	1 cut(s)	412
Eco147I	AGGCCT	1 cut(s)	207
Eco24I	GRGCYC	1 cut(s)	543
Eco31I	GGTCTC	2 cut(s)	929, 1462
Eco32I	GATATC	1 cut(s)	844
Eco47I	GGWCC	5 cut(s)	26, 396, 584, 1110, 1381
Eco52I	CGGCCG	1 cut(s)	1655
Eco57I	CTGAAG	2 cut(s)	524, 1385
Eco72I	CACGTG	1 cut(s)	1106
Eco88I	CYCGRG	1 cut(s)	754
EcoO109I	RGGNCCY	1 cut(s)	1110
EcoRI	GAATTC	1 cut(s)	137
EcoRII	CCWGG	3 cut(s)	236, 260, 1154
EcoRV	GATATC	1 cut(s)	844
EcoT14I	CCWWGG	1 cut(s)	412
EcoT22I	ATGCAT	2 cut(s)	923, 1485
EcoT38I	GRGCYC	1 cut(s)	543
EgeI	GGCGCC	2 cut(s)	183, 760
EheI	GGCGCC	2 cut(s)	183, 760
ErhI	CCWWGG	1 cut(s)	412
Esp3I	CGTCTC	1 cut(s)	1533
FaeI	CATG	9 cut(s)	61, 416, 475, 596, 877, 1102, 1348, 1538, 1640
FaqI	GGGAC	3 cut(s)	278, 581, 1123
FatI	CATG	9 cut(s)	57, 412, 471, 592, 873, 1098, 1344, 1534, 1636
FauI	CCCGC	1 cut(s)	1480
FauNDI	CATATG	1 cut(s)	175
FblI	GTMKAC	2 cut(s)	909, 1089
Fnu4HI	GCNGC	6 cut(s)	67, 107, 180, 1013, 1406, 1700
FokI	GGATG	6 cut(s)	86, 592, 930, 1079, 1220, 1283
FriOI	GRGCYC	1 cut(s)	543
Fsp4HI	GCNGC	6 cut(s)	67, 107, 180, 1013, 1406, 1700
FspBI	CTAG	1 cut(s)	1524
GlaI	GCGC	4 cut(s)	183, 220, 760, 1161
GluI	GCNGC	6 cut(s)	67, 107, 180, 1013, 1406, 1700
GsaI	CCCAGC	2 cut(s)	73, 602
HaeII	RGCGCY	2 cut(s)	185, 762
HaeIII	GGCC	5 cut(s)	207, 411, 417, 462, 1657
HapII	CCGG	3 cut(s)	330, 687, 1385
HhaI	GCGC	4 cut(s)	184, 221, 761, 1162
Hin1I	GRCGYC	2 cut(s)	182, 759
Hin1II	CATG	9 cut(s)	61, 416, 475, 596, 877, 1102, 1348, 1538, 1640
Hin6I	GCGC	4 cut(s)	182, 219, 759, 1160
HinP1I	GCGC	4 cut(s)	182, 219, 759, 1160
HincII	GTYRAC	3 cut(s)	149, 783, 801
HindII	GTYRAC	3 cut(s)	149, 783, 801
HinfI	GANTC	9 cut(s)	224, 278, 424, 563, 620, 717, 971, 1647, 1688
HpaII	CCGG	3 cut(s)	330, 687, 1385
HphI	GGTGA	4 cut(s)	119, 250, 689, 1592
Hpy188III	TCNNGA	6 cut(s)	47, 394, 700, 721, 997, 1379
Hpy99I	CGWCG	1 cut(s)	1673
HpyAV	CCTTC	4 cut(s)	499, 923, 1217, 1570
HpyCH4III	ACNGT	9 cut(s)	367, 658, 810, 946, 960, 1214, 1241, 1414, 1489
HpyCH4IV	ACGT	5 cut(s)	444, 906, 1105, 1245, 1671
HpyF10VI	GCNNNNNNNGC	4 cut(s)	63, 179, 468, 765
HpyF3I	CTNAG	4 cut(s)	110, 1335, 1510, 1515
HpySE526I	ACGT	5 cut(s)	444, 906, 1105, 1245, 1671
Hsp92I	GRCGYC	2 cut(s)	182, 759
Hsp92II	CATG	9 cut(s)	61, 416, 475, 596, 877, 1102, 1348, 1538, 1640
HspAI	GCGC	4 cut(s)	182, 219, 759, 1160
KasI	GGCGCC	2 cut(s)	181, 758
KflI	GGGWCCC	1 cut(s)	1110
KroI	GCCGGC	1 cut(s)	686
KroNI	GCCGGC	1 cut(s)	688
Kzo9I	GATC	5 cut(s)	403, 702, 882, 1080, 1564
LguI	GCTCTTC	1 cut(s)	1244
LmnI	GCTCC	1 cut(s)	607
Lsp1109I	GCAGC	3 cut(s)	999, 1417, 1711
LweI	GCATC	3 cut(s)	908, 930, 1340
MaeI	CTAG	1 cut(s)	1524
MaeII	ACGT	5 cut(s)	444, 906, 1105, 1245, 1671
MaeIII	GTNAC	4 cut(s)	125, 831, 1241, 1730
MalI	GATC	5 cut(s)	405, 704, 884, 1082, 1566
MbiI	CCGCTC	1 cut(s)	1475
MboI	GATC	5 cut(s)	403, 702, 882, 1080, 1564
MboII	GAAGA	8 cut(s)	347, 382, 383, 490, 541, 664, 1082, 1261
MfeI	CAATTG	1 cut(s)	763
MhlI	GDGCHC	4 cut(s)	543, 988, 1229, 1256
MluCI	AATT	6 cut(s)	94, 137, 345, 640, 763, 1570
Mly113I	GGCGCC	2 cut(s)	182, 759
MlyI	GAGTC	2 cut(s)	629, 1697
MmeI	TCCRAC	4 cut(s)	754, 871, 1248, 1420
MnlI	CCTC	8 cut(s)	266, 401, 722, 763, 887, 1124, 1158, 1447
Mph1103I	ATGCAT	2 cut(s)	923, 1485
MroNI	GCCGGC	1 cut(s)	686
MroXI	GAANNNNTTC	2 cut(s)	339, 1607
MseI	TTAA	1 cut(s)	1677
MslI	CAYNNNNRTG	3 cut(s)	56, 417, 878
MspA1I	CMGCKG	1 cut(s)	69
MspI	CCGG	3 cut(s)	330, 687, 1385
MspR9I	CCNGG	5 cut(s)	238, 262, 330, 1156, 1385
MunI	CAATTG	1 cut(s)	763
MvaI	CCWGG	3 cut(s)	238, 262, 1156
MvnI	CGCG	1 cut(s)	221
MwoI	GCNNNNNNNGC	4 cut(s)	63, 179, 468, 765
NaeI	GCCGGC	1 cut(s)	688
NarI	GGCGCC	2 cut(s)	182, 759
NciI	CCSGG	2 cut(s)	330, 1385
NcoI	CCATGG	1 cut(s)	412
NdeI	CATATG	1 cut(s)	175
NdeII	GATC	5 cut(s)	403, 702, 882, 1080, 1564
NgoMIV	GCCGGC	1 cut(s)	686
NlaIII	CATG	9 cut(s)	61, 416, 475, 596, 877, 1102, 1348, 1538, 1640
NlaIV	GGNNCC	7 cut(s)	183, 231, 760, 1111, 1112, 1219, 1383
NmeAIII	GCCGAG	1 cut(s)	558
NmuCI	GTSAC	4 cut(s)	125, 831, 1241, 1730
NsiI	ATGCAT	2 cut(s)	923, 1485
NspI	RCATGY	2 cut(s)	61, 877
PceI	AGGCCT	1 cut(s)	207
PciI	ACATGT	1 cut(s)	873
PciSI	GCTCTTC	1 cut(s)	1244
PdiI	GCCGGC	1 cut(s)	688
PdmI	GAANNNNTTC	2 cut(s)	339, 1607
PfeI	GAWTC	7 cut(s)	224, 278, 424, 563, 717, 971, 1647
PflFI	GACNNNGTC	1 cut(s)	778
PkrI	GCNGC	6 cut(s)	68, 108, 181, 1014, 1407, 1701
PleI	GAGTC	2 cut(s)	628, 1696
PluTI	GGCGCC	2 cut(s)	185, 762
PmaCI	CACGTG	1 cut(s)	1106
PmlI	CACGTG	1 cut(s)	1106
PpsI	GAGTC	2 cut(s)	628, 1696
Ppu21I	YACGTR	1 cut(s)	1106
PpuMI	RGGWCCY	1 cut(s)	1110
PscI	ACATGT	1 cut(s)	873
Psp5II	RGGWCCY	1 cut(s)	1110
Psp6I	CCWGG	3 cut(s)	236, 260, 1154
PspCI	CACGTG	1 cut(s)	1106
PspFI	CCCAGC	2 cut(s)	69, 598
PspGI	CCWGG	3 cut(s)	236, 260, 1154
PspN4I	GGNNCC	7 cut(s)	183, 231, 760, 1111, 1112, 1219, 1383
PspPI	GGNCC	6 cut(s)	26, 396, 461, 584, 1110, 1381
PspPPI	RGGWCCY	1 cut(s)	1110
PsrI	GAACNNNNNNTAC	2 cut(s)	233, 265
PstI	CTGCAG	1 cut(s)	797
PsyI	GACNNNGTC	1 cut(s)	778
RsaI	GTAC	7 cut(s)	62, 251, 434, 515, 1063, 1351, 1430
RsaNI	GTAC	7 cut(s)	61, 250, 433, 514, 1062, 1350, 1429
RseI	CAYNNNNRTG	3 cut(s)	56, 417, 878
Rsr2I	CGGWCCG	1 cut(s)	584
RsrII	CGGWCCG	1 cut(s)	584
SapI	GCTCTTC	1 cut(s)	1244
SaqAI	TTAA	1 cut(s)	1677
SatI	GCNGC	6 cut(s)	67, 107, 180, 1013, 1406, 1700
Sau3AI	GATC	5 cut(s)	403, 702, 882, 1080, 1564
Sau96I	GGNCC	6 cut(s)	26, 396, 461, 584, 1110, 1381
SbfI	CCTGCAGG	1 cut(s)	797
SchI	GAGTC	2 cut(s)	629, 1697
ScrFI	CCNGG	5 cut(s)	238, 262, 330, 1156, 1385
SdaI	CCTGCAGG	1 cut(s)	797
SduI	GDGCHC	4 cut(s)	543, 988, 1229, 1256
SfaNI	GCATC	3 cut(s)	908, 930, 1340
SfcI	CTRYAG	1 cut(s)	793
SfoI	GGCGCC	2 cut(s)	183, 760
SinI	GGWCC	5 cut(s)	26, 396, 584, 1110, 1381
SmiMI	CAYNNNNRTG	3 cut(s)	56, 417, 878
SmlI	CTYRAG	2 cut(s)	45, 1685
SmoI	CTYRAG	2 cut(s)	45, 1685
Sse8387I	CCTGCAGG	1 cut(s)	797
Sse9I	AATT	6 cut(s)	94, 137, 345, 640, 763, 1570
SseBI	AGGCCT	1 cut(s)	207
SspDI	GGCGCC	2 cut(s)	181, 758
SspI	AATATT	2 cut(s)	528, 1391
SspMI	CTAG	1 cut(s)	1524
StuI	AGGCCT	1 cut(s)	207
StyD4I	CCNGG	5 cut(s)	236, 260, 328, 1154, 1383
StyI	CCWWGG	1 cut(s)	412
TaaI	ACNGT	9 cut(s)	367, 658, 810, 946, 960, 1214, 1241, 1414, 1489
TaiI	ACGT	5 cut(s)	447, 909, 1108, 1248, 1674
TaqI	TCGA	6 cut(s)	212, 276, 406, 543, 1008, 1650
TaqII	GACCGA	1 cut(s)	601
TasI	AATT	6 cut(s)	94, 137, 345, 640, 763, 1570
TatI	WGTACW	3 cut(s)	432, 513, 1428
TauI	GCSGC	3 cut(s)	69, 109, 182
TfiI	GAWTC	7 cut(s)	224, 278, 424, 563, 717, 971, 1647
Tru1I	TTAA	1 cut(s)	1677
Tru9I	TTAA	1 cut(s)	1677
TscAI	CASTG	6 cut(s)	58, 507, 621, 840, 931, 1217
TseFI	GTSAC	4 cut(s)	125, 831, 1241, 1730
TseI	GCWGC	3 cut(s)	1012, 1405, 1699
Tsp45I	GTSAC	4 cut(s)	125, 831, 1241, 1730
TspDTI	ATGAA	3 cut(s)	1083, 1679, 1694
TspGWI	ACGGA	2 cut(s)	1079, 1557
TspRI	CASTG	6 cut(s)	58, 507, 621, 840, 931, 1217
Tth111I	GACNNNGTC	1 cut(s)	778
VpaK11BI	GGWCC	5 cut(s)	26, 396, 584, 1110, 1381
XapI	RAATTY	3 cut(s)	137, 345, 1570
XceI	RCATGY	2 cut(s)	61, 877
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1152, 1264
XmiI	GTMKAC	2 cut(s)	909, 1089
XmnI	GAANNNNTTC	2 cut(s)	339, 1607
XspI	CTAG	1 cut(s)	1524
Zsp2I	ATGCAT	2 cut(s)	923, 1485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.