Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0019514.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

5891 .. 7496

Gene Structure 1606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0019514.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

atgaaaccaattctcgctcctctttaccctttcagcttgtttctcctcttcgtcaccctactgagtggagatatcaactcaaagctttcccctatagaagttggtagtgcatcccaagttttgaaagcaccaccgtcgtcctcgaagggcagccaagtaccgtacaccacagcacggctttctcgctcggaattcacttaccgatttcccgtcagtcccggccagaagttcattcacttatacttcttcccaggctcatgcaacgctgacttcgagcgctccaagtctctcttctctttcaaggccggtggctgcacccttctcaaagatttcaacgcttctgtcactgcagatgctgattattttgagacgatgctcaaagaattctgtattaacattgagccggaacaacagaggctgaacatcacattcactcccagcaaagatggatacgcgtttatcaacgggattgaaattatgtccatgcctgcctatctctactacactgccgcccaaggcgatgggcctagtgttataggcaccggaaaccggaacccagtggaaaacaactccgctatggagatgatctatcgaatcaacgtcggcggaattcctatctcaccgaatgaagacacgggcatgttatcacaaagcaataagagtattattaaatttgcaaaaatcccgaacatattttcaaatatcccgagctacactgcgccggtagatgtttaccgaaacggccggtcaatggaggcgaacagaaccatcagcaagagctataatctcacctgggggtttcctgtagatccacaatattacctggtgaggctccatttttgtgaaattatatttgagttggagcaagatcagactaccttgtgttcgtgcccagtcttccaaaccaggagaaaagtaaagttgcatatcattgttgcactacgagcaaatccagacgattcgaaaactcggtatcctgatgcaatcttgaatggcctcgaaatcttcaaactgaatcacacaaacggcaatctcgccggacccaatcccgacggaaaaccaaatgtgaaaccagaaagctctagaaaactgaagaagaagtcgattcctatgcttgctatccttgccggtgtagtttcggtcttacttgttctttccctagtcgggtttttagttttcaggcgtggaagaaaactcaaggactccagctccagccacaggatgatgaggccagccatgaccactgggtcacttttaccatcttatttgtgtcgttacttttcacagctggcagagatcaaagccgccaccaaatacttcgatgatactttcatcattggagctggggatttggcaacgtatacaaaggattcatcgatggtggaggcactccagttgcaatcaaactgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

470

Amino Acids

52.21

Weight (kDa)

9.16

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1246
AccB1I	GGYRCC	1 cut(s)	539
AccI	GTMKAC	1 cut(s)	1361
AccII	CGCG	1 cut(s)	455
AciI	CCGC	4 cut(s)	510, 573, 606, 1305
AclWI	GGATC	1 cut(s)	803
AcoI	YGGCCR	2 cut(s)	220, 742
AcsI	RAATTY	4 cut(s)	191, 383, 609, 671
AcuI	CTGAAG	1 cut(s)	1112
AfaI	GTAC	2 cut(s)	159, 164
AfeI	AGCGCT	1 cut(s)	278
AfiI	CCNNNNNNNGG	5 cut(s)	174, 549, 751, 1164, 1218
AflIII	ACRYGT	1 cut(s)	453
AgsI	TTSAA	7 cut(s)	124, 301, 334, 473, 699, 991, 1009
AjnI	CCWGG	4 cut(s)	250, 791, 822, 905
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
AluBI	AGCT	8 cut(s)	36, 85, 711, 780, 1080, 1209, 1288, 1343
AluI	AGCT	8 cut(s)	36, 85, 711, 780, 1080, 1209, 1288, 1343
Alw26I	GTCTC	2 cut(s)	291, 362
AlwI	GGATC	1 cut(s)	803
AlwNI	CAGNNNCTG	2 cut(s)	356, 418
Ama87I	CYCGRG	1 cut(s)	706
Aor51HI	AGCGCT	1 cut(s)	278
AoxI	GGCC	6 cut(s)	220, 303, 524, 742, 994, 1229
ApeKI	GCWGC	2 cut(s)	150, 312
ApoI	RAATTY	4 cut(s)	191, 383, 609, 671
AspLEI	GCGC	2 cut(s)	279, 721
AspS9I	GGNCC	2 cut(s)	524, 1040
AsuC2I	CCSGG	1 cut(s)	219
AsuHPI	GGTGA	4 cut(s)	46, 612, 781, 838
AsuII	TTCGAA	1 cut(s)	962
AvaI	CYCGRG	1 cut(s)	706
AvaII	GGWCC	1 cut(s)	1040
BaeGI	GKGCMC	1 cut(s)	893
BanI	GGYRCC	1 cut(s)	539
BbsI	GAAGAC	2 cut(s)	636, 889
BbvI	GCAGC	2 cut(s)	162, 299
BccI	CCATC	5 cut(s)	440, 515, 776, 1267, 1372
BceAI	ACGGC	3 cut(s)	191, 757, 1042
BcgI	CGANNNNNNTGC	4 cut(s)	117, 151, 1093, 1127
BciT130I	CCWGG	4 cut(s)	252, 793, 824, 907
BciVI	GTATCC	2 cut(s)	443, 984
BcnI	CCSGG	1 cut(s)	219
BcoDI	GTCTC	2 cut(s)	291, 362
BfaI	CTAG	3 cut(s)	528, 1083, 1160
BfmI	CTRYAG	3 cut(s)	93, 348, 804
BfoI	RGCGCY	1 cut(s)	280
BfuI	GTATCC	2 cut(s)	443, 984
BisI	GCNGC	4 cut(s)	151, 313, 510, 1305
BlsI	GCNGC	4 cut(s)	152, 314, 511, 1306
Bme1390I	CCNGG	5 cut(s)	219, 252, 793, 824, 907
Bme18I	GGWCC	1 cut(s)	1040
BmeT110I	CYCGRG	1 cut(s)	706
BmgT120I	GGNCC	2 cut(s)	524, 1040
BmiI	GGNNCC	4 cut(s)	541, 554, 833, 1042
BmrFI	CCNGG	5 cut(s)	219, 252, 793, 824, 907
BmrI	ACTGGG	3 cut(s)	551, 887, 1254
BmsI	GCATC	4 cut(s)	119, 343, 363, 970
BmuI	ACTGGG	3 cut(s)	551, 887, 1254
BpiI	GAAGAC	2 cut(s)	636, 889
BpmI	CTGGAG	3 cut(s)	1189, 1195, 1376
Bpu14I	TTCGAA	1 cut(s)	962
BpuEI	CTTGAG	1 cut(s)	1181
BpuMI	CCSGG	1 cut(s)	219
Bsa29I	ATCGAT	1 cut(s)	1376
BsaJI	CCNNGG	3 cut(s)	250, 514, 792
BsaWI	WCCGGW	2 cut(s)	542, 549
BsaXI	ACNNNNNCTCC	4 cut(s)	418, 448, 1193, 1223
Bsc4I	CCNNNNNNNGG	5 cut(s)	174, 549, 751, 1164, 1218
Bse118I	RCCGGY	4 cut(s)	305, 721, 744, 1127
Bse1I	ACTGG	4 cut(s)	557, 893, 1249, 1393
BseBI	CCWGG	4 cut(s)	252, 793, 824, 907
BseCI	ATCGAT	1 cut(s)	1376
BseDI	CCNNGG	3 cut(s)	250, 514, 792
BseGI	GGATG	2 cut(s)	110, 1227
BseLI	CCNNNNNNNGG	5 cut(s)	174, 549, 751, 1164, 1218
BseMII	CTCAG	1 cut(s)	53
BseNI	ACTGG	4 cut(s)	557, 893, 1249, 1393
BseRI	GAGGAG	2 cut(s)	9, 35
BseSI	GKGCMC	1 cut(s)	893
BseX3I	CGGCCG	1 cut(s)	742
BseXI	GCAGC	2 cut(s)	162, 299
BseYI	CCCAGC	2 cut(s)	437, 1343
BsgI	GTGCAG	1 cut(s)	298
Bsh1236I	CGCG	1 cut(s)	455
Bsh1285I	CGRYCG	1 cut(s)	745
BshFI	GGCC	6 cut(s)	222, 305, 526, 744, 996, 1231
BshNI	GGYRCC	1 cut(s)	539
BshVI	ATCGAT	1 cut(s)	1376
BsiEI	CGRYCG	1 cut(s)	745
BsiHKCI	CYCGRG	1 cut(s)	706
BsiSI	CCGG	9 cut(s)	219, 306, 404, 543, 550, 722, 745, 1038, 1128
BslFI	GGGAC	1 cut(s)	201
BslI	CCNNNNNNNGG	5 cut(s)	174, 549, 751, 1164, 1218
BsmAI	GTCTC	2 cut(s)	291, 362
BsmBI	CGTCTC	1 cut(s)	362
BsmFI	GGGAC	1 cut(s)	201
BsnI	GGCC	6 cut(s)	222, 305, 526, 744, 996, 1231
BsoBI	CYCGRG	1 cut(s)	706
Bsp119I	TTCGAA	1 cut(s)	962
Bsp1286I	GDGCHC	1 cut(s)	893
Bsp143I	GATC	4 cut(s)	585, 808, 868, 1296
BspACI	CCGC	4 cut(s)	510, 573, 606, 1305
BspANI	GGCC	6 cut(s)	222, 305, 526, 744, 996, 1231
BspCNI	CTCAG	1 cut(s)	54
BspDI	ATCGAT	1 cut(s)	1376
BspFNI	CGCG	1 cut(s)	455
BspLI	GGNNCC	4 cut(s)	541, 554, 833, 1042
BspMAI	CTGCAG	1 cut(s)	352
BspPI	GGATC	1 cut(s)	803
BspT104I	TTCGAA	1 cut(s)	962
BspT107I	GGYRCC	1 cut(s)	539
BsrFI	RCCGGY	4 cut(s)	305, 721, 744, 1127
BsrI	ACTGG	4 cut(s)	557, 893, 1249, 1393
BssAI	RCCGGY	4 cut(s)	305, 721, 744, 1127
BssECI	CCNNGG	3 cut(s)	250, 514, 792
BssMI	GATC	4 cut(s)	585, 808, 868, 1296
BssNAI	GTATAC	1 cut(s)	1362
BssT1I	CCWWGG	1 cut(s)	514
Bst1107I	GTATAC	1 cut(s)	1362
Bst2UI	CCWGG	4 cut(s)	252, 793, 824, 907
Bst4CI	ACNGT	2 cut(s)	135, 162
Bst6I	CTCTTC	2 cut(s)	53, 296
BstBI	TTCGAA	1 cut(s)	962
BstC8I	GCNNGC	4 cut(s)	489, 1116, 1233, 1290
BstDEI	CTNAG	1 cut(s)	62
BstF5I	GGATG	2 cut(s)	110, 1227
BstFNI	CGCG	1 cut(s)	455
BstH2I	RGCGCY	1 cut(s)	280
BstHHI	GCGC	2 cut(s)	279, 721
BstKTI	GATC	4 cut(s)	588, 811, 871, 1299
BstMAI	GTCTC	2 cut(s)	291, 362
BstMBI	GATC	4 cut(s)	585, 808, 868, 1296
BstMCI	CGRYCG	1 cut(s)	745
BstMWI	GCNNNNNNNGC	2 cut(s)	944, 1124
BstNI	CCWGG	4 cut(s)	252, 793, 824, 907
BstNSI	RCATGY	1 cut(s)	643
BstSCI	CCNGG	5 cut(s)	217, 250, 791, 822, 905
BstSFI	CTRYAG	3 cut(s)	93, 348, 804
BstSLI	GKGCMC	1 cut(s)	893
BstUI	CGCG	1 cut(s)	455
BstV1I	GCAGC	2 cut(s)	162, 299
BstV2I	GAAGAC	2 cut(s)	636, 889
BstX2I	RGATCY	1 cut(s)	808
BstXI	CCANNNNNNTGG	1 cut(s)	521
BstYI	RGATCY	1 cut(s)	808
BstZ17I	GTATAC	1 cut(s)	1362
BstZI	CGGCCG	1 cut(s)	742
Bsu15I	ATCGAT	1 cut(s)	1376
BsuI	GTATCC	2 cut(s)	443, 984
BsuRI	GGCC	6 cut(s)	222, 305, 526, 744, 996, 1231
BsuTUI	ATCGAT	1 cut(s)	1376
BtgZI	GCGATG	1 cut(s)	534
BtsCI	GGATG	2 cut(s)	110, 1227
BtsI	GCAGTG	3 cut(s)	345, 504, 714
BtsIMutI	CAGTG	5 cut(s)	345, 504, 564, 714, 1242
Cac8I	GCNNGC	4 cut(s)	489, 1116, 1233, 1290
CaiI	CAGNNNCTG	2 cut(s)	356, 418
CfoI	GCGC	2 cut(s)	279, 721
Cfr10I	RCCGGY	4 cut(s)	305, 721, 744, 1127
Cfr13I	GGNCC	2 cut(s)	524, 1040
ClaI	ATCGAT	1 cut(s)	1376
CsiI	ACCWGGT	1 cut(s)	822
Csp6I	GTAC	2 cut(s)	158, 163
CspCI	CAANNNNNGTGG	2 cut(s)	289, 324
CviAII	CATG	4 cut(s)	258, 484, 640, 1237
CviQI	GTAC	2 cut(s)	158, 163
DdeI	CTNAG	1 cut(s)	62
DpnI	GATC	4 cut(s)	587, 810, 870, 1298
DpnII	GATC	4 cut(s)	585, 808, 868, 1296
DrdI	GACNNNNNNGTC	1 cut(s)	1246
DseDI	GACNNNNNNGTC	1 cut(s)	1246
EaeI	YGGCCR	2 cut(s)	220, 742
EagI	CGGCCG	1 cut(s)	742
Eam1104I	CTCTTC	2 cut(s)	53, 296
EarI	CTCTTC	2 cut(s)	53, 296
EciI	GGCGGA	1 cut(s)	621
EclXI	CGGCCG	1 cut(s)	742
Eco130I	CCWWGG	1 cut(s)	514
Eco32I	GATATC	1 cut(s)	73
Eco47I	GGWCC	1 cut(s)	1040
Eco47III	AGCGCT	1 cut(s)	278
Eco52I	CGGCCG	1 cut(s)	742
Eco57I	CTGAAG	1 cut(s)	1112
Eco88I	CYCGRG	1 cut(s)	706
EcoRI	GAATTC	3 cut(s)	191, 383, 609
EcoRII	CCWGG	4 cut(s)	250, 791, 822, 905
EcoRV	GATATC	1 cut(s)	73
EcoT14I	CCWWGG	1 cut(s)	514
ErhI	CCWWGG	1 cut(s)	514
Esp3I	CGTCTC	1 cut(s)	362
FaeI	CATG	4 cut(s)	261, 487, 643, 1240
FalI	AAGNNNNNCTT	2 cut(s)	275, 307
FaqI	GGGAC	1 cut(s)	201
FatI	CATG	4 cut(s)	257, 483, 639, 1236
FblI	GTMKAC	1 cut(s)	1361
Fnu4HI	GCNGC	4 cut(s)	151, 313, 510, 1305
FokI	GGATG	2 cut(s)	97, 1234
Fsp4HI	GCNGC	4 cut(s)	151, 313, 510, 1305
FspBI	CTAG	3 cut(s)	528, 1083, 1160
GlaI	GCGC	2 cut(s)	278, 720
GluI	GCNGC	4 cut(s)	151, 313, 510, 1305
GsaI	CCCAGC	2 cut(s)	441, 1347
GsuI	CTGGAG	3 cut(s)	1189, 1195, 1376
HaeII	RGCGCY	1 cut(s)	280
HaeIII	GGCC	6 cut(s)	222, 305, 526, 744, 996, 1231
HapII	CCGG	9 cut(s)	219, 306, 404, 543, 550, 722, 745, 1038, 1128
HhaI	GCGC	2 cut(s)	279, 721
Hin1II	CATG	4 cut(s)	261, 487, 643, 1240
Hin6I	GCGC	2 cut(s)	277, 719
HinP1I	GCGC	2 cut(s)	277, 719
HindIII	AAGCTT	1 cut(s)	83
HinfI	GANTC	6 cut(s)	594, 959, 1015, 1105, 1202, 1370
HpaII	CCGG	9 cut(s)	219, 306, 404, 543, 550, 722, 745, 1038, 1128
HphI	GGTGA	4 cut(s)	46, 612, 781, 838
Hpy166II	GTNNAC	3 cut(s)	165, 733, 1362
Hpy188I	TCNGA	2 cut(s)	190, 873
Hpy188III	TCNNGA	7 cut(s)	685, 706, 953, 977, 988, 1049, 1083
Hpy8I	GTNNAC	3 cut(s)	165, 733, 1362
Hpy99I	CGWCG	3 cut(s)	139, 605, 1055
HpyAV	CCTTC	2 cut(s)	139, 329
HpyCH4III	ACNGT	2 cut(s)	135, 162
HpyCH4IV	ACGT	2 cut(s)	600, 1358
HpyCH4V	TGCA	9 cut(s)	110, 261, 315, 350, 677, 925, 938, 983, 1399
HpyF10VI	GCNNNNNNNGC	2 cut(s)	944, 1124
HpyF3I	CTNAG	1 cut(s)	62
HpySE526I	ACGT	2 cut(s)	600, 1358
Hsp92II	CATG	4 cut(s)	261, 487, 643, 1240
HspAI	GCGC	2 cut(s)	277, 719
Kzo9I	GATC	4 cut(s)	585, 808, 868, 1296
LmnI	GCTCC	6 cut(s)	22, 284, 837, 862, 1214, 1340
Lsp1109I	GCAGC	2 cut(s)	162, 299
LweI	GCATC	4 cut(s)	119, 343, 363, 970
MabI	ACCWGGT	1 cut(s)	822
MaeI	CTAG	3 cut(s)	528, 1083, 1160
MaeII	ACGT	2 cut(s)	600, 1358
MaeIII	GTNAC	4 cut(s)	52, 343, 1248, 1274
MalI	GATC	4 cut(s)	587, 810, 870, 1298
MboI	GATC	4 cut(s)	585, 808, 868, 1296
MboII	GAAGA	9 cut(s)	40, 238, 283, 641, 889, 997, 1105, 1108, 1200
MflI	RGATCY	1 cut(s)	808
MhlI	GDGCHC	1 cut(s)	893
MluCI	AATT	7 cut(s)	9, 191, 383, 474, 609, 671, 846
MluI	ACGCGT	1 cut(s)	453
MlyI	GAGTC	1 cut(s)	1196
MmeI	TCCRAC	1 cut(s)	840
MnlI	CCTC	9 cut(s)	30, 56, 151, 408, 748, 822, 1007, 1221, 1378
MseI	TTAA	2 cut(s)	393, 669
MslI	CAYNNNNRTG	2 cut(s)	638, 840
MspA1I	CMGCKG	1 cut(s)	1288
MspI	CCGG	9 cut(s)	219, 306, 404, 543, 550, 722, 745, 1038, 1128
MspR9I	CCNGG	5 cut(s)	219, 252, 793, 824, 907
MvaI	CCWGG	4 cut(s)	252, 793, 824, 907
MvnI	CGCG	1 cut(s)	455
MwoI	GCNNNNNNNGC	2 cut(s)	944, 1124
NciI	CCSGG	1 cut(s)	219
NdeII	GATC	4 cut(s)	585, 808, 868, 1296
NlaIII	CATG	4 cut(s)	261, 487, 643, 1240
NlaIV	GGNNCC	4 cut(s)	541, 554, 833, 1042
NmuCI	GTSAC	3 cut(s)	52, 343, 1248
NspI	RCATGY	1 cut(s)	643
NspV	TTCGAA	1 cut(s)	962
PcsI	WCGNNNNNNNCGW	1 cut(s)	270
PfeI	GAWTC	5 cut(s)	594, 959, 1015, 1105, 1370
PkrI	GCNGC	4 cut(s)	152, 314, 511, 1306
PleI	GAGTC	1 cut(s)	1196
PpsI	GAGTC	1 cut(s)	1196
Psp6I	CCWGG	4 cut(s)	250, 791, 822, 905
PspFI	CCCAGC	2 cut(s)	437, 1343
PspGI	CCWGG	4 cut(s)	250, 791, 822, 905
PspN4I	GGNNCC	4 cut(s)	541, 554, 833, 1042
PspPI	GGNCC	2 cut(s)	524, 1040
PstI	CTGCAG	1 cut(s)	352
PstNI	CAGNNNCTG	2 cut(s)	356, 418
PsuI	RGATCY	1 cut(s)	808
PvuII	CAGCTG	1 cut(s)	1288
RsaI	GTAC	2 cut(s)	159, 164
RsaNI	GTAC	2 cut(s)	158, 163
RseI	CAYNNNNRTG	2 cut(s)	638, 840
SaqAI	TTAA	2 cut(s)	393, 669
SatI	GCNGC	4 cut(s)	151, 313, 510, 1305
Sau3AI	GATC	4 cut(s)	585, 808, 868, 1296
Sau96I	GGNCC	2 cut(s)	524, 1040
SchI	GAGTC	1 cut(s)	1196
ScrFI	CCNGG	5 cut(s)	219, 252, 793, 824, 907
SduI	GDGCHC	1 cut(s)	893
SexAI	ACCWGGT	1 cut(s)	822
SfaNI	GCATC	4 cut(s)	119, 343, 363, 970
SfcI	CTRYAG	3 cut(s)	93, 348, 804
SfuI	TTCGAA	1 cut(s)	962
SinI	GGWCC	1 cut(s)	1040
SmiMI	CAYNNNNRTG	2 cut(s)	638, 840
SmlI	CTYRAG	1 cut(s)	1196
SmoI	CTYRAG	1 cut(s)	1196
Sse9I	AATT	7 cut(s)	9, 191, 383, 474, 609, 671, 846
SsiI	CCGC	4 cut(s)	510, 573, 606, 1305
SspI	AATATT	1 cut(s)	818
SspMI	CTAG	3 cut(s)	528, 1083, 1160
StyD4I	CCNGG	5 cut(s)	217, 250, 791, 822, 905
StyI	CCWWGG	1 cut(s)	514
TaaI	ACNGT	2 cut(s)	135, 162
TaiI	ACGT	2 cut(s)	603, 1361
TaqI	TCGA	8 cut(s)	143, 273, 592, 962, 999, 1103, 1320, 1376
TaqII	GACCGA	1 cut(s)	1129
TasI	AATT	7 cut(s)	9, 191, 383, 474, 609, 671, 846
TauI	GCSGC	2 cut(s)	512, 1307
TfiI	GAWTC	5 cut(s)	594, 959, 1015, 1105, 1370
Tru1I	TTAA	2 cut(s)	393, 669
Tru9I	TTAA	2 cut(s)	393, 669
TscAI	CASTG	5 cut(s)	352, 511, 564, 721, 1249
TseFI	GTSAC	3 cut(s)	52, 343, 1248
TseI	GCWGC	2 cut(s)	150, 312
Tsp45I	GTSAC	3 cut(s)	52, 343, 1248
TspDTI	ATGAA	5 cut(s)	17, 220, 642, 1321, 1362
TspGWI	ACGGA	1 cut(s)	1068
TspRI	CASTG	5 cut(s)	352, 511, 564, 721, 1249
VpaK11BI	GGWCC	1 cut(s)	1040
XapI	RAATTY	4 cut(s)	191, 383, 609, 671
XbaI	TCTAGA	1 cut(s)	1082
XceI	RCATGY	1 cut(s)	643
XmiI	GTMKAC	1 cut(s)	1361
XspI	CTAG	3 cut(s)	528, 1083, 1160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.