MD11G1067200.v1.1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
5741990 .. 5742750
761 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1067200.v1.1.491

Sequence Viewer

Length: 687 bp
ATGATCTTGGTTTACGATTACATGGCATGCGGCACTCTCGGTGACCATCTATATCGCACATGTAACCCCAAACCTCTTCCCTGGGAACAACGACTTGAAATTTGTATTGGCGTAGCGCGAGGGTTGCACTACCTTCACAACACTACCAAGGGCTCCATTATTCATGGCGATGTGAAGAGCACAAACATTTTATTAGATGAGAAAATGGTGGCCAAGGTATCGGATTTCGGGTTGTCAAAAATGGGCACAACCAGCACGTCCAAAACACACATCAGCACGATGGTGAAAGATAGTTTTGGGTATCTAGACCCAGAGTACTACAGACCTCTGATGCATACGGTGGAGGCTAGGCATATCAACCTCGCTAAGTGGGCCAAGGGTTGTCATGGAGACGGGACACTTGGTCAAATCATTGACCCAATTGTGAAGGATAAGATTGAAGTCGAGTGCTTGAACAAGTTCATTGAGATTGCTATAAGTTGCTTAAATGATAAAGGAATCGAACGACCGTCGATGAATGATGTTGTGAGGGGGCTTGAATGGGTATTGCAGCTTCATCAAAAGAGCATTGGAAGTGAGGGTGACAATGGGGTTGCCTTTATCAATGACAGAGGCGACAATGAATATTCCAAACGAAGTATATCTGTGATAGTCTTTTCTGAGATCAACGATACGGATGGAAGATGA

Protein Analysis

229

Amino Acids

25.51

Weight (kDa)

6.13

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 1 - 112 1e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2 - 106 6.6e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 118
AciI CCGC 1 cut(s) 30
AcoI YGGCCR 1 cut(s) 210
AcsI RAATTY 1 cut(s) 99
AfaI GTAC 1 cut(s) 317
AflIII ACRYGT 1 cut(s) 59
AgsI TTSAA 4 cut(s) 98, 440, 454, 539
AhdI GACNNNNNGTC 1 cut(s) 402
AjiI CACGTC 1 cut(s) 258
AjnI CCWGG 1 cut(s) 80
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
AleI CACNNNNGTG 1 cut(s) 281
AluBI AGCT 1 cut(s) 553
AluI AGCT 1 cut(s) 553
Alw21I GWGCWC 1 cut(s) 182
Alw26I GTCTC 1 cut(s) 384
AoxI GGCC 2 cut(s) 210, 372
ApeKI GCWGC 1 cut(s) 550
ApoI RAATTY 1 cut(s) 99
ArsI GACNNNNNNTTYG 2 cut(s) 84, 116
Asp700I GAANNNNTTC 1 cut(s) 458
AspLEI GCGC 1 cut(s) 118
AspS9I GGNCC 1 cut(s) 372
AsuHPI GGTGA 3 cut(s) 53, 295, 593
BaeGI GKGCMC 1 cut(s) 248
BalI TGGCCA 1 cut(s) 212
BanII GRGCYC 1 cut(s) 155
BarI GAAGNNNNNNTAC 2 cut(s) 537, 569
Bbv12I GWGCWC 1 cut(s) 182
BbvI GCAGC 1 cut(s) 562
BccI CCATC 3 cut(s) 54, 274, 671
BciT130I CCWGG 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 384
BfaI CTAG 2 cut(s) 305, 348
BfmI CTRYAG 1 cut(s) 319
BisI GCNGC 2 cut(s) 31, 551
BlsI GCNGC 2 cut(s) 32, 552
BmcAI AGTACT 1 cut(s) 317
Bme1390I CCNGG 1 cut(s) 82
BmeRI GACNNNNNGTC 1 cut(s) 402
BmgBI CACGTC 1 cut(s) 258
BmgT120I GGNCC 1 cut(s) 372
BmiI GGNNCC 1 cut(s) 154
BmrFI CCNGG 1 cut(s) 82
BmsI GCATC 1 cut(s) 321
BsaJI CCNNGG 5 cut(s) 80, 81, 147, 213, 375
BseBI CCWGG 1 cut(s) 82
BseDI CCNNGG 5 cut(s) 80, 81, 147, 213, 375
BseGI GGATG 1 cut(s) 682
BseMII CTCAG 1 cut(s) 651
BseSI GKGCMC 1 cut(s) 248
BseXI GCAGC 1 cut(s) 562
Bsh1236I CGCG 1 cut(s) 118
Bsh1285I CGRYCG 1 cut(s) 509
BshFI GGCC 2 cut(s) 212, 374
BsiEI CGRYCG 1 cut(s) 509
BsiHKAI GWGCWC 1 cut(s) 182
BslFI GGGAC 1 cut(s) 409
BsmAI GTCTC 1 cut(s) 384
BsmBI CGTCTC 1 cut(s) 384
BsmFI GGGAC 1 cut(s) 409
BsnI GGCC 2 cut(s) 212, 374
Bsp1286I GDGCHC 3 cut(s) 155, 182, 248
Bsp143I GATC 2 cut(s) 3, 663
BspACI CCGC 1 cut(s) 30
BspANI GGCC 2 cut(s) 212, 374
BspCNI CTCAG 1 cut(s) 652
BspFNI CGCG 1 cut(s) 118
BspLI GGNNCC 1 cut(s) 154
BspQI GCTCTTC 1 cut(s) 170
BssECI CCNNGG 5 cut(s) 80, 81, 147, 213, 375
BssMI GATC 2 cut(s) 3, 663
BssT1I CCWWGG 3 cut(s) 147, 213, 375
Bst2UI CCWGG 1 cut(s) 82
Bst4CI ACNGT 2 cut(s) 340, 510
Bst6I CTCTTC 2 cut(s) 81, 170
BstC8I GCNNGC 1 cut(s) 28
BstDEI CTNAG 2 cut(s) 366, 660
BstEII GGTNACC 1 cut(s) 41
BstF5I GGATG 1 cut(s) 682
BstFNI CGCG 1 cut(s) 118
BstHHI GCGC 1 cut(s) 118
BstKTI GATC 2 cut(s) 6, 666
BstMAI GTCTC 1 cut(s) 384
BstMBI GATC 2 cut(s) 3, 663
BstMCI CGRYCG 1 cut(s) 509
BstMWI GCNNNNNNNGC 3 cut(s) 124, 252, 371
BstNI CCWGG 1 cut(s) 82
BstNSI RCATGY 2 cut(s) 30, 63
BstPI GGTNACC 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 80
BstSFI CTRYAG 1 cut(s) 319
BstSLI GKGCMC 1 cut(s) 248
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 1 cut(s) 562
BsuRI GGCC 2 cut(s) 212, 374
BtgZI GCGATG 1 cut(s) 183
BtrI CACGTC 1 cut(s) 258
BtsCI GGATG 1 cut(s) 682
Cac8I GCNNGC 1 cut(s) 28
CfoI GCGC 1 cut(s) 118
Cfr13I GGNCC 1 cut(s) 372
Csp6I GTAC 1 cut(s) 316
CviAII CATG 5 cut(s) 22, 27, 60, 164, 386
CviJI RGCY 6 cut(s) 153, 212, 347, 374, 535, 553
CviKI_1 RGCY 6 cut(s) 153, 212, 347, 374, 535, 553
CviQI GTAC 1 cut(s) 316
DdeI CTNAG 2 cut(s) 366, 660
DpnI GATC 2 cut(s) 5, 665
DpnII GATC 2 cut(s) 3, 663
DriI GACNNNNNGTC 1 cut(s) 402
EaeI YGGCCR 1 cut(s) 210
Eam1104I CTCTTC 2 cut(s) 81, 170
Eam1105I GACNNNNNGTC 1 cut(s) 402
EarI CTCTTC 2 cut(s) 81, 170
Eco130I CCWWGG 3 cut(s) 147, 213, 375
Eco24I GRGCYC 1 cut(s) 155
Eco91I GGTNACC 1 cut(s) 41
EcoO65I GGTNACC 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 80
EcoT14I CCWWGG 3 cut(s) 147, 213, 375
EcoT22I ATGCAT 1 cut(s) 336
EcoT38I GRGCYC 1 cut(s) 155
ErhI CCWWGG 3 cut(s) 147, 213, 375
Esp3I CGTCTC 1 cut(s) 384
FaeI CATG 5 cut(s) 25, 30, 63, 167, 389
FaqI GGGAC 1 cut(s) 409
FatI CATG 5 cut(s) 21, 26, 59, 163, 385
Fnu4HI GCNGC 2 cut(s) 31, 551
FriOI GRGCYC 1 cut(s) 155
Fsp4HI GCNGC 2 cut(s) 31, 551
FspBI CTAG 2 cut(s) 305, 348
GlaI GCGC 1 cut(s) 117
GluI GCNGC 2 cut(s) 31, 551
HaeIII GGCC 2 cut(s) 212, 374
HhaI GCGC 1 cut(s) 118
Hin1II CATG 5 cut(s) 25, 30, 63, 167, 389
Hin6I GCGC 1 cut(s) 116
HinP1I GCGC 1 cut(s) 116
HinfI GANTC 1 cut(s) 498
HphI GGTGA 3 cut(s) 53, 295, 593
Hpy166II GTNNAC 1 cut(s) 13
Hpy188I TCNGA 3 cut(s) 223, 330, 661
Hpy188III TCNNGA 1 cut(s) 305
Hpy8I GTNNAC 1 cut(s) 13
Hpy99I CGWCG 1 cut(s) 514
HpyAV CCTTC 2 cut(s) 143, 421
HpyCH4III ACNGT 2 cut(s) 340, 510
HpyCH4IV ACGT 1 cut(s) 257
HpyCH4V TGCA 3 cut(s) 127, 334, 550
HpyF10VI GCNNNNNNNGC 3 cut(s) 124, 252, 371
HpyF3I CTNAG 2 cut(s) 366, 660
HpySE526I ACGT 1 cut(s) 257
Hsp92II CATG 5 cut(s) 25, 30, 63, 167, 389
HspAI GCGC 1 cut(s) 116
Kzo9I GATC 2 cut(s) 3, 663
LguI GCTCTTC 1 cut(s) 170
LmnI GCTCC 1 cut(s) 158
LpnPI CCDG 4 cut(s) 67, 94, 265, 324
Lsp1109I GCAGC 1 cut(s) 562
LweI GCATC 1 cut(s) 321
MaeI CTAG 2 cut(s) 305, 348
MaeII ACGT 1 cut(s) 257
MaeIII GTNAC 3 cut(s) 41, 62, 581
MalI GATC 2 cut(s) 5, 665
MboI GATC 2 cut(s) 3, 663
MboII GAAGA 2 cut(s) 68, 187
MfeI CAATTG 1 cut(s) 420
MhlI GDGCHC 3 cut(s) 155, 182, 248
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 2 cut(s) 99, 420
MluNI TGGCCA 1 cut(s) 212
MnlI CCTC 8 cut(s) 84, 113, 336, 337, 371, 522, 571, 605
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 336
MroXI GAANNNNTTC 1 cut(s) 458
MscI TGGCCA 1 cut(s) 212
MseI TTAA 1 cut(s) 485
MslI CAYNNNNRTG 2 cut(s) 168, 281
Msp20I TGGCCA 1 cut(s) 212
MspR9I CCNGG 1 cut(s) 82
MunI CAATTG 1 cut(s) 420
MvaI CCWGG 1 cut(s) 82
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 3 cut(s) 124, 252, 371
NdeII GATC 2 cut(s) 3, 663
NlaIII CATG 5 cut(s) 25, 30, 63, 167, 389
NlaIV GGNNCC 1 cut(s) 154
NmuCI GTSAC 2 cut(s) 41, 581
NsiI ATGCAT 1 cut(s) 336
NspI RCATGY 2 cut(s) 30, 63
OliI CACNNNNGTG 1 cut(s) 281
PaeI GCATGC 1 cut(s) 30
PasI CCCWGGG 1 cut(s) 81
PciI ACATGT 1 cut(s) 59
PciSI GCTCTTC 1 cut(s) 170
PdmI GAANNNNTTC 1 cut(s) 458
PfeI GAWTC 1 cut(s) 498
PkrI GCNGC 2 cut(s) 32, 552
PscI ACATGT 1 cut(s) 59
Psp6I CCWGG 1 cut(s) 80
PspEI GGTNACC 1 cut(s) 41
PspGI CCWGG 1 cut(s) 80
PspN4I GGNNCC 1 cut(s) 154
PspPI GGNCC 1 cut(s) 372
RsaI GTAC 1 cut(s) 317
RsaNI GTAC 1 cut(s) 316
RseI CAYNNNNRTG 2 cut(s) 168, 281
SapI GCTCTTC 1 cut(s) 170
SaqAI TTAA 1 cut(s) 485
SatI GCNGC 2 cut(s) 31, 551
Sau3AI GATC 2 cut(s) 3, 663
Sau96I GGNCC 1 cut(s) 372
ScaI AGTACT 1 cut(s) 317
ScrFI CCNGG 1 cut(s) 82
SduI GDGCHC 3 cut(s) 155, 182, 248
SetI ASST 7 cut(s) 76, 135, 219, 260, 328, 363, 555
SfaNI GCATC 1 cut(s) 321
SfcI CTRYAG 1 cut(s) 319
SmiMI CAYNNNNRTG 2 cut(s) 168, 281
SphI GCATGC 1 cut(s) 30
Sse9I AATT 2 cut(s) 99, 420
SsiI CCGC 1 cut(s) 30
SspI AATATT 1 cut(s) 626
SspMI CTAG 2 cut(s) 305, 348
StyD4I CCNGG 1 cut(s) 80
StyI CCWWGG 3 cut(s) 147, 213, 375
TaaI ACNGT 2 cut(s) 340, 510
TaiI ACGT 1 cut(s) 260
TaqI TCGA 3 cut(s) 444, 501, 512
TasI AATT 2 cut(s) 99, 420
TatI WGTACW 1 cut(s) 315
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 1 cut(s) 498
Tru1I TTAA 1 cut(s) 485
Tru9I TTAA 1 cut(s) 485
TseFI GTSAC 2 cut(s) 41, 581
TseI GCWGC 1 cut(s) 550
Tsp45I GTSAC 2 cut(s) 41, 581
TspDTI ATGAA 5 cut(s) 152, 451, 530, 545, 636
XapI RAATTY 1 cut(s) 99
XbaI TCTAGA 1 cut(s) 304
XceI RCATGY 2 cut(s) 30, 63
XmnI GAANNNNTTC 1 cut(s) 458
XspI CTAG 2 cut(s) 305, 348
ZrmI AGTACT 1 cut(s) 317
Zsp2I ATGCAT 1 cut(s) 336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.