FvH4_6g46580

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
35502958 .. 35505785
2828 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g46580.t1

Sequence Viewer

Length: 2631 bp
ATGAAACCAATCATCACTCTTCTCTACCTCTCCTTGTTCTTCATCACTCTCTTTCTCACCGGTCAGTCCCAACCATACACTCCGGTCGACAATATCACCCTCGCCTGCGGCAATTCCGGCCAACCGACCTCCAATGATCTGCTCAGAACTTGGACAGGAGATGTCAACTCCAAGTTCACCCCAATAGGTAACGCATCCGAATCCATAACTGCACCTCGGTCCTCCACAGCCAGCCAAGTCCCTTACACCAACGCTCGTCTCTCTCGCTCTGAATTCACTTACACTATTCCCCTCTCTCCCGGCCAAAAGTTCATCCGCTTACATTTCAACCCCGACACATACAACAACAACTTCCAACGCTCCAACTCCCTCTTCTCCGTCACCGCCGCCGGCTTCACTCTCCTCAAAGACTTCAACGCCTCCGTCACTGCCGACGCTAACGGTGGCTCCCCGCTGGTCAAAGAGTTCTGTGTAAACATCGAGACAGGACAGAGACTCAACATCACCTTCACACCAAGCAAAGATGCTTACGCTTTCATCAACGGAATCGAAGTTGTGTCCATGCCTACCAGTTTTTACTATACTTCCTCACCTAATTTCATTGACACCAGCGCAAGCTCATATCCAATCAGAAACGACACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGTGGAGGCCCCATCGCGCAGGACGAAGACACCGGAATGTACCGGAATTGGGACTCGGCCGACGATAAGTATTTGGATGATCTAAGTGGAAAATTCAGCGTGCTTCCACAGAACAATACCATCGAGCTCAACTTCGTCAGAGTTCCAGAGTACTCTGCTCCGAAACGGGTTTACACAACAGGTCGGTCAATGGGGATGAACACAACCATCAACAAGAGCTATAACCTCACATGGATATTTCCCTTGGATCCCAAGTTTTATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGACATTACCGAGTCTAGTGATCGAGCGTTTCAAATCTTCTTGGCCAATCAAACCGCAGAACAACTTGCAGATGTTATTGTATGGAGTGGAGCTAATGGGAATCCAGTTTACAGAGACTACGTTGTCGGCATGTTCATGCCTCCGGTTGGAAGCGAGAAGAAAGTTAATCTCTATCTAGTACTGGCAGCGCTACAGAGAGATTCATATACTAGATACAACGATGCCATCTTGAACGGACTAGAAATCTTCAAGCTCAACGACTCCACTGGAAACCTTGCTGGACCTAACCCTGATCCAATAACTCAGGTCGACGCACCAAAGAGTAGTCCTGGTAAGAAAAAGTCTACTCCTATGGCAGCTATTATTGCAGGCGTAGCTTCCGGGCTAGTTGTGCTCTCTGTTCTCGGATTCTTTATTTTCCGGCGAGGCAGAAAGGTCAAGGACTCTAGCAGAAGCCAATCAAAGTGGGGTGTCATTTCGTTTTCAATGACTACCAAGTCCACTAAGTCCTACGGTTCATCTCTGCCGTCCGAGTTGTGTCACCACTTCTCATTGGCGGAGATCAGAGCCGCCACGAATAATTTTGATGCTTCCAACATTATTGGCCTCGGCGGGTTTGGTAACGTGTACAAAGGTACCATCAACGGTGCTCCCACCCCCGTTGCGATCAAACGGCTCAAAGCCGAGTCGTCTCAGGGGGCCCTAGAGTTCAAGACCGAGATCGACTTGCTCTCCCAACTCCGTCACCTCCATCTTGTGTCTTTAATCGGTTATTGTGACGACGAGGGTGAGATGATATTGGTGTATGACTACATGGAAAATGGGACGTTACGTGATCATTTGTACAACACCAAAAGTATTCCACCTCTTTCTTGGGAACAAAGGCTACAAGCTTGTATTGGCGCGGCGCGTGGGTTGCACTACCTTCACACCGGTGCTAAGTGCATGATCATCCACCGTGATGTGAAGAGCACAAACATCTTGTTGGACGATAAATGGGTGGCAAAGGTATCCGATTTCGGGTTGTCGAAAATGGGACCGACGACCATGTCCAAGACTCACATTAGCACCGTGGTTAAGGGAAGTTTCGGATATCTCGACCCGGAGTACTACCGGCGTCAGCAGCTAACTGAGAAGTCTGATGTCTATTCATTTGGTGTAGTATTGTGTGAAGTGTTGTGTGCTAGACCGGCTTTGATACGTACAAAGGAGAAGAAGCAAATGAACCTAGCTGCATGGTTTAAGACGTGTTATGGAAATGGGACGCTTGACCAAATCATTGATCCAAATTTGAGGGGTAAGATTGTGAATGTGTGCTTGAACAAGTTTGTTGAAGTTGCAATTAGTTGTATGCATGATAATGGGAATGAAAGACCGTCGATGAATGATGTTGTATGGGCGCTTGAGTTTGCATTGAAGCTTCAACAGACTGCAGAGGGTTTGGAGTTGGATTTCAATGCCGGAAAGAAGAATGAAGATGAGGCTCCATTGGTGAATGATAGTGATGAAAGGTTTAGTGGCATTTGGGCAGACTCGTCAAGTTCTAAGAACAGCAGGGTGACCAAAACTAGTAGCAGTGACCAGAATTCTAGTACCAGTGAATCCATTAAAGGGTTGTCTGGGACTGTCTTTTCTGAGATCTATGATCCAAATGGAAGATGA

Protein Analysis

877

Amino Acids

96.92

Weight (kDa)

6.66

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 35 - 407 7.6e-31 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 521 - 789 6.1e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 521 - 788 6.6e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1091, 1465, 2017
Acc65I GGTACC 1 cut(s) 1604
AccB1I GGYRCC 1 cut(s) 1604
AccI GTMKAC 3 cut(s) 87, 1278, 1313
AccII CGCG 3 cut(s) 689, 1874, 1879
AclWI GGATC 5 cut(s) 914, 927, 1256, 2246, 2609
AcoI YGGCCR 4 cut(s) 118, 301, 729, 1011
AcsI RAATTY 4 cut(s) 272, 764, 2257, 2554
AcyI GRCGYC 1 cut(s) 2086
AfeI AGCGCT 1 cut(s) 1158
AfiI CCNNNNNNNGG 4 cut(s) 721, 1115, 1989, 2580
AflIII ACRYGT 2 cut(s) 1593, 2216
AgeI ACCGGT 2 cut(s) 59, 1901
AhlI ACTAGT 1 cut(s) 2537
AjiI CACGTC 1 cut(s) 2217
AjnI CCWGG 2 cut(s) 936, 1297
AjuI GAANNNNNNNTTGG 2 cut(s) 356, 388
AleI CACNNNNGTG 1 cut(s) 1902
Alw21I GWGCWC 4 cut(s) 801, 1365, 1621, 1943
Alw26I GTCTC 6 cut(s) 263, 476, 487, 937, 1077, 1665
AlwI GGATC 5 cut(s) 914, 927, 1256, 2246, 2609
Aor51HI AGCGCT 1 cut(s) 1158
AoxI GGCC 7 cut(s) 118, 301, 679, 729, 1011, 1573, 1668
ApaI GGGCCC 1 cut(s) 1672
ApeKI GCWGC 4 cut(s) 1154, 1325, 2092, 2201
ApoI RAATTY 4 cut(s) 272, 764, 2257, 2554
AsiGI ACCGGT 2 cut(s) 59, 1901
Asp718I GGTACC 1 cut(s) 1604
AspLEI GCGC 6 cut(s) 614, 691, 1159, 1874, 1879, 2371
AspS9I GGNCC 6 cut(s) 219, 680, 1250, 1668, 1669, 2006
AsuC2I CCSGG 3 cut(s) 300, 1351, 2072
AvaII GGWCC 3 cut(s) 219, 1250, 2006
BaeGI GKGCMC 1 cut(s) 1672
BaeI ACNNNNGTAYC 2 cut(s) 1588, 1621
BalI TGGCCA 1 cut(s) 1013
BamHI GGATCC 1 cut(s) 919
BanI GGYRCC 1 cut(s) 1604
BanII GRGCYC 2 cut(s) 801, 1672
BbsI GAAGAC 1 cut(s) 705
Bbv12I GWGCWC 4 cut(s) 801, 1365, 1621, 1943
BbvI GCAGC 4 cut(s) 1166, 1337, 2104, 2188
BccI CCATC 7 cut(s) 646, 692, 800, 887, 1202, 1616, 1728
BceAI ACGGC 2 cut(s) 1480, 1658
BciT130I CCWGG 2 cut(s) 938, 1299
BciVI GTATCC 1 cut(s) 1990
BclI TGATCA 2 cut(s) 1804, 1917
BcnI CCSGG 3 cut(s) 300, 1351, 2072
BcoDI GTCTC 6 cut(s) 263, 476, 487, 937, 1077, 1665
BcuI ACTAGT 1 cut(s) 2537
BfmI CTRYAG 2 cut(s) 1160, 2400
BfoI RGCGCY 2 cut(s) 1160, 2372
BfuI GTATCC 1 cut(s) 1990
BglII AGATCT 1 cut(s) 2607
BisI GCNGC 8 cut(s) 109, 387, 1155, 1326, 1539, 1875, 2093, 2202
BlsI GCNGC 8 cut(s) 110, 388, 1156, 1327, 1540, 1876, 2094, 2203
BmcAI AGTACT 3 cut(s) 824, 1149, 2078
Bme1390I CCNGG 5 cut(s) 300, 938, 1299, 1351, 2072
Bme18I GGWCC 3 cut(s) 219, 1250, 2006
BmgBI CACGTC 1 cut(s) 2217
BmgT120I GGNCC 6 cut(s) 219, 680, 1250, 1668, 1669, 2006
BmiI GGNNCC 8 cut(s) 448, 682, 921, 1606, 1669, 1670, 2007, 2454
BmrFI CCNGG 5 cut(s) 300, 938, 1299, 1351, 2072
BmsI GCATC 4 cut(s) 203, 514, 1180, 1546
BpiI GAAGAC 1 cut(s) 705
BpmI CTGGAG 1 cut(s) 668
BpuEI CTTGAG 1 cut(s) 2393
BpuMI CCSGG 3 cut(s) 300, 1351, 2072
BsaAI YACGTR 2 cut(s) 1802, 2171
BsaHI GRCGYC 1 cut(s) 2086
BsaJI CCNNGG 4 cut(s) 215, 915, 1576, 2040
BsaWI WCCGGW 6 cut(s) 59, 82, 704, 714, 1111, 1901
BsaXI ACNNNNNCTCC 6 cut(s) 431, 461, 641, 671, 1685, 1715
Bsc4I CCNNNNNNNGG 4 cut(s) 721, 1115, 1989, 2580
Bse118I RCCGGY 5 cut(s) 59, 389, 1901, 2082, 2158
Bse1I ACTGG 5 cut(s) 570, 1073, 1155, 1240, 2565
BseBI CCWGG 2 cut(s) 938, 1299
BseDI CCNNGG 4 cut(s) 215, 915, 1576, 2040
BseGI GGATG 5 cut(s) 194, 312, 754, 873, 1920
BseLI CCNNNNNNNGG 4 cut(s) 721, 1115, 1989, 2580
BseMII CTCAG 5 cut(s) 157, 1286, 1676, 2091, 2595
BseNI ACTGG 5 cut(s) 570, 1073, 1155, 1240, 2565
BseRI GAGGAG 1 cut(s) 392
BseSI GKGCMC 1 cut(s) 1672
BseX3I CGGCCG 1 cut(s) 729
BseXI GCAGC 4 cut(s) 1166, 1337, 2104, 2188
BsgI GTGCAG 1 cut(s) 195
Bsh1236I CGCG 3 cut(s) 689, 1874, 1879
Bsh1285I CGRYCG 2 cut(s) 87, 732
BshFI GGCC 7 cut(s) 120, 303, 681, 731, 1013, 1575, 1670
BshNI GGYRCC 1 cut(s) 1604
BshTI ACCGGT 2 cut(s) 59, 1901
BsiEI CGRYCG 2 cut(s) 87, 732
BsiHKAI GWGCWC 4 cut(s) 801, 1365, 1621, 1943
BslFI GGGAC 7 cut(s) 52, 224, 737, 1807, 2019, 2245, 2605
BslI CCNNNNNNNGG 4 cut(s) 721, 1115, 1989, 2580
BsmAI GTCTC 6 cut(s) 263, 476, 487, 937, 1077, 1665
BsmBI CGTCTC 2 cut(s) 263, 1665
BsmFI GGGAC 7 cut(s) 52, 224, 737, 1807, 2019, 2245, 2605
BsnI GGCC 7 cut(s) 120, 303, 681, 731, 1013, 1575, 1670
Bsp120I GGGCCC 1 cut(s) 1668
Bsp1286I GDGCHC 5 cut(s) 801, 1365, 1621, 1672, 1943
Bsp1407I TGTACA 2 cut(s) 1596, 1812
BspANI GGCC 7 cut(s) 120, 303, 681, 731, 1013, 1575, 1670
BspCNI CTCAG 5 cut(s) 156, 1285, 1675, 2092, 2596
BspFNI CGCG 3 cut(s) 689, 1874, 1879
BspLI GGNNCC 8 cut(s) 448, 682, 921, 1606, 1669, 1670, 2007, 2454
BspMAI CTGCAG 1 cut(s) 2404
BspPI GGATC 5 cut(s) 914, 927, 1256, 2246, 2609
BspQI GCTCTTC 1 cut(s) 1931
BspT107I GGYRCC 1 cut(s) 1604
BsrFI RCCGGY 5 cut(s) 59, 389, 1901, 2082, 2158
BsrGI TGTACA 2 cut(s) 1596, 1812
BsrI ACTGG 5 cut(s) 570, 1073, 1155, 1240, 2565
BssAI RCCGGY 5 cut(s) 59, 389, 1901, 2082, 2158
BssECI CCNNGG 4 cut(s) 215, 915, 1576, 2040
BssNI GRCGYC 1 cut(s) 2086
BssT1I CCWWGG 1 cut(s) 915
Bst2UI CCWGG 2 cut(s) 938, 1299
Bst4CI ACNGT 7 cut(s) 443, 1484, 1616, 1928, 2041, 2346, 2596
Bst6I CTCTTC 3 cut(s) 24, 377, 1931
BstACI GRCGYC 1 cut(s) 2086
BstAUI TGTACA 2 cut(s) 1596, 1812
BstBAI YACGTR 2 cut(s) 1802, 2171
BstC8I GCNNGC 6 cut(s) 106, 232, 391, 616, 773, 1339
BstDEI CTNAG 9 cut(s) 143, 755, 1272, 1473, 1662, 1908, 2100, 2514, 2604
BstDSI CCRYGG 1 cut(s) 2040
BstEII GGTNACC 1 cut(s) 2527
BstF5I GGATG 5 cut(s) 194, 312, 754, 873, 1920
BstFNI CGCG 3 cut(s) 689, 1874, 1879
BstH2I RGCGCY 2 cut(s) 1160, 2372
BstHHI GCGC 6 cut(s) 614, 691, 1159, 1874, 1879, 2371
BstMAI GTCTC 6 cut(s) 263, 476, 487, 937, 1077, 1665
BstMCI CGRYCG 2 cut(s) 87, 732
BstMWI GCNNNNNNNGC 7 cut(s) 117, 1334, 1343, 1360, 1885, 2092, 2159
BstNI CCWGG 2 cut(s) 938, 1299
BstNSI RCATGY 1 cut(s) 1102
BstPI GGTNACC 1 cut(s) 2527
BstSCI CCNGG 5 cut(s) 298, 936, 1297, 1349, 2070
BstSFI CTRYAG 2 cut(s) 1160, 2400
BstSLI GKGCMC 1 cut(s) 1672
BstSNI TACGTA 1 cut(s) 2171
BstUI CGCG 3 cut(s) 689, 1874, 1879
BstV1I GCAGC 4 cut(s) 1166, 1337, 2104, 2188
BstV2I GAAGAC 1 cut(s) 705
BstX2I RGATCY 2 cut(s) 919, 2607
BstYI RGATCY 2 cut(s) 919, 2607
BstZI CGGCCG 1 cut(s) 729
BsuI GTATCC 1 cut(s) 1990
BsuRI GGCC 7 cut(s) 120, 303, 681, 731, 1013, 1575, 1670
BtgI CCRYGG 1 cut(s) 2040
BtgZI GCGATG 1 cut(s) 670
BtrI CACGTC 1 cut(s) 2217
BtsCI GGATG 5 cut(s) 194, 312, 754, 873, 1920
BtsI GCAGTG 2 cut(s) 426, 2551
BtsIMutI CAGTG 4 cut(s) 426, 1233, 2551, 2572
Cac8I GCNNGC 6 cut(s) 106, 232, 391, 616, 773, 1339
CfoI GCGC 6 cut(s) 614, 691, 1159, 1874, 1879, 2371
Cfr10I RCCGGY 5 cut(s) 59, 389, 1901, 2082, 2158
Cfr13I GGNCC 6 cut(s) 219, 680, 1250, 1668, 1669, 2006
CseI GACGC 4 cut(s) 443, 1289, 2075, 2242
CsiI ACCWGGT 1 cut(s) 936
CspAI ACCGGT 2 cut(s) 59, 1901
CspCI CAANNNNNGTGG 6 cut(s) 655, 690, 1415, 1450, 1612, 1647
CviAII CATG 9 cut(s) 562, 903, 1099, 1105, 1783, 1915, 2017, 2205, 2324
DdeI CTNAG 9 cut(s) 143, 755, 1272, 1473, 1662, 1908, 2100, 2514, 2604
DrdI GACNNNNNNGTC 3 cut(s) 1091, 1465, 2017
DseDI GACNNNNNNGTC 3 cut(s) 1091, 1465, 2017
EaeI YGGCCR 4 cut(s) 118, 301, 729, 1011
EagI CGGCCG 1 cut(s) 729
Eam1104I CTCTTC 3 cut(s) 24, 377, 1931
EarI CTCTTC 3 cut(s) 24, 377, 1931
EciI GGCGGA 1 cut(s) 1541
Ecl136II GAGCTC 1 cut(s) 799
EclXI CGGCCG 1 cut(s) 729
Eco105I TACGTA 1 cut(s) 2171
Eco130I CCWWGG 1 cut(s) 915
Eco24I GRGCYC 2 cut(s) 801, 1672
Eco32I GATATC 1 cut(s) 2063
Eco47I GGWCC 3 cut(s) 219, 1250, 2006
Eco47III AGCGCT 1 cut(s) 1158
Eco52I CGGCCG 1 cut(s) 729
Eco53kI GAGCTC 1 cut(s) 799
Eco91I GGTNACC 1 cut(s) 2527
EcoICRI GAGCTC 1 cut(s) 799
EcoO109I RGGNCCY 3 cut(s) 680, 1668, 1669
EcoO65I GGTNACC 1 cut(s) 2527
EcoRI GAATTC 2 cut(s) 272, 2554
EcoRII CCWGG 2 cut(s) 936, 1297
EcoRV GATATC 1 cut(s) 2063
EcoT14I CCWWGG 1 cut(s) 915
EcoT22I ATGCAT 1 cut(s) 2325
EcoT38I GRGCYC 2 cut(s) 801, 1672
ErhI CCWWGG 1 cut(s) 915
Esp3I CGTCTC 2 cut(s) 263, 1665
FaeI CATG 9 cut(s) 565, 906, 1102, 1108, 1786, 1918, 2020, 2208, 2327
FaqI GGGAC 7 cut(s) 52, 224, 737, 1807, 2019, 2245, 2605
FatI CATG 9 cut(s) 561, 902, 1098, 1104, 1782, 1914, 2016, 2204, 2323
FauI CCCGC 2 cut(s) 459, 1574
FbaI TGATCA 2 cut(s) 1804, 1917
FblI GTMKAC 3 cut(s) 87, 1278, 1313
Fnu4HI GCNGC 8 cut(s) 109, 387, 1155, 1326, 1539, 1875, 2093, 2202
FokI GGATG 5 cut(s) 181, 299, 761, 880, 1907
FriOI GRGCYC 2 cut(s) 801, 1672
Fsp4HI GCNGC 8 cut(s) 109, 387, 1155, 1326, 1539, 1875, 2093, 2202
GlaI GCGC 6 cut(s) 613, 690, 1158, 1873, 1878, 2370
GluI GCNGC 8 cut(s) 109, 387, 1155, 1326, 1539, 1875, 2093, 2202
GsuI CTGGAG 1 cut(s) 668
HaeII RGCGCY 2 cut(s) 1160, 2372
HaeIII GGCC 7 cut(s) 120, 303, 681, 731, 1013, 1575, 1670
HgaI GACGC 4 cut(s) 443, 1289, 2075, 2242
HhaI GCGC 6 cut(s) 614, 691, 1159, 1874, 1879, 2371
Hin1I GRCGYC 1 cut(s) 2086
Hin1II CATG 9 cut(s) 565, 906, 1102, 1108, 1786, 1918, 2020, 2208, 2327
Hin6I GCGC 6 cut(s) 612, 689, 1157, 1872, 1877, 2369
HinP1I GCGC 6 cut(s) 612, 689, 1157, 1872, 1877, 2369
HincII GTYRAC 3 cut(s) 88, 166, 1279
HindII GTYRAC 3 cut(s) 88, 166, 1279
HindIII AAGCTT 2 cut(s) 1860, 2387
Hpy188III TCNNGA 6 cut(s) 481, 647, 818, 1198, 1681, 2066
Hpy99I CGWCG 7 cut(s) 437, 674, 737, 1283, 1754, 2014, 2350
HpyAV CCTTC 2 cut(s) 517, 1904
HpyCH4III ACNGT 7 cut(s) 443, 1484, 1616, 1928, 2041, 2346, 2596
HpyCH4IV ACGT 7 cut(s) 669, 1089, 1593, 1796, 1801, 2170, 2216
HpyF10VI GCNNNNNNNGC 7 cut(s) 117, 1334, 1343, 1360, 1885, 2092, 2159
HpyF3I CTNAG 9 cut(s) 143, 755, 1272, 1473, 1662, 1908, 2100, 2514, 2604
HpySE526I ACGT 7 cut(s) 669, 1089, 1593, 1796, 1801, 2170, 2216
Hsp92I GRCGYC 1 cut(s) 2086
Hsp92II CATG 9 cut(s) 565, 906, 1102, 1108, 1786, 1918, 2020, 2208, 2327
HspAI GCGC 6 cut(s) 612, 689, 1157, 1872, 1877, 2369
KpnI GGTACC 1 cut(s) 1608
KroI GCCGGC 1 cut(s) 389
KroNI GCCGGC 1 cut(s) 391
Ksp22I TGATCA 2 cut(s) 1804, 1917
LguI GCTCTTC 1 cut(s) 1931
LmnI GCTCC 6 cut(s) 365, 452, 835, 1058, 1624, 2458
Lsp1109I GCAGC 4 cut(s) 1166, 1337, 2104, 2188
LweI GCATC 4 cut(s) 203, 514, 1180, 1546
MabI ACCWGGT 1 cut(s) 936
MaeII ACGT 7 cut(s) 669, 1089, 1593, 1796, 1801, 2170, 2216
MflI RGATCY 2 cut(s) 919, 2607
MhlI GDGCHC 5 cut(s) 801, 1365, 1621, 1672, 1943
MlsI TGGCCA 1 cut(s) 1013
MluCI AATT 9 cut(s) 112, 272, 595, 718, 764, 1549, 2257, 2310, 2554
MluNI TGGCCA 1 cut(s) 1013
MlyI GAGTC 9 cut(s) 489, 719, 939, 989, 1223, 1406, 1664, 2020, 2495
MmeI TCCRAC 6 cut(s) 379, 387, 1096, 1587, 1935, 2397
Mox20I TGGCCA 1 cut(s) 1013
Mph1103I ATGCAT 1 cut(s) 2325
MroNI GCCGGC 1 cut(s) 389
MscI TGGCCA 1 cut(s) 1013
MseI TTAA 5 cut(s) 1134, 1733, 2046, 2211, 2577
MslI CAYNNNNRTG 6 cut(s) 707, 954, 1103, 1902, 1929, 2328
Msp20I TGGCCA 1 cut(s) 1013
MspA1I CMGCKG 1 cut(s) 454
MspR9I CCNGG 5 cut(s) 300, 938, 1299, 1351, 2072
MteI GCGCNGCGC 1 cut(s) 1875
MvaI CCWGG 2 cut(s) 938, 1299
MvnI CGCG 3 cut(s) 689, 1874, 1879
MwoI GCNNNNNNNGC 7 cut(s) 117, 1334, 1343, 1360, 1885, 2092, 2159
NaeI GCCGGC 1 cut(s) 391
NciI CCSGG 3 cut(s) 300, 1351, 2072
NgoMIV GCCGGC 1 cut(s) 389
NlaIII CATG 9 cut(s) 565, 906, 1102, 1108, 1786, 1918, 2020, 2208, 2327
NlaIV GGNNCC 8 cut(s) 448, 682, 921, 1606, 1669, 1670, 2007, 2454
NmeAIII GCCGAG 3 cut(s) 707, 1557, 1678
NmuCI GTSAC 7 cut(s) 379, 424, 1508, 1712, 1745, 2527, 2546
NsiI ATGCAT 1 cut(s) 2325
NspI RCATGY 1 cut(s) 1102
OliI CACNNNNGTG 1 cut(s) 1902
PciSI GCTCTTC 1 cut(s) 1931
PcsI WCGNNNNNNNCGW 2 cut(s) 693, 2064
PdiI GCCGGC 1 cut(s) 391
PfeI GAWTC 8 cut(s) 200, 546, 663, 965, 1069, 1169, 1377, 2570
PflFI GACNNNGTC 1 cut(s) 2017
PinAI ACCGGT 2 cut(s) 59, 1901
PkrI GCNGC 8 cut(s) 110, 388, 1156, 1327, 1540, 1876, 2094, 2203
PleI GAGTC 9 cut(s) 489, 719, 939, 988, 1223, 1406, 1663, 2020, 2495
PpsI GAGTC 9 cut(s) 489, 719, 939, 988, 1223, 1406, 1663, 2020, 2495
Ppu21I YACGTR 2 cut(s) 1802, 2171
Psp124BI GAGCTC 1 cut(s) 801
Psp6I CCWGG 2 cut(s) 936, 1297
PspEI GGTNACC 1 cut(s) 2527
PspGI CCWGG 2 cut(s) 936, 1297
PspN4I GGNNCC 8 cut(s) 448, 682, 921, 1606, 1669, 1670, 2007, 2454
PspOMI GGGCCC 1 cut(s) 1668
PspPI GGNCC 6 cut(s) 219, 680, 1250, 1668, 1669, 2006
PsrI GAACNNNNNNTAC 2 cut(s) 1839, 1871
PstI CTGCAG 1 cut(s) 2404
PsuI RGATCY 2 cut(s) 919, 2607
PsyI GACNNNGTC 1 cut(s) 2017
RseI CAYNNNNRTG 6 cut(s) 707, 954, 1103, 1902, 1929, 2328
SacI GAGCTC 1 cut(s) 801
SalI GTCGAC 2 cut(s) 86, 1277
SapI GCTCTTC 1 cut(s) 1931
SaqAI TTAA 5 cut(s) 1134, 1733, 2046, 2211, 2577
SatI GCNGC 8 cut(s) 109, 387, 1155, 1326, 1539, 1875, 2093, 2202
Sau96I GGNCC 6 cut(s) 219, 680, 1250, 1668, 1669, 2006
ScaI AGTACT 3 cut(s) 824, 1149, 2078
SchI GAGTC 9 cut(s) 489, 719, 939, 989, 1223, 1406, 1664, 2020, 2495
ScrFI CCNGG 5 cut(s) 300, 938, 1299, 1351, 2072
SduI GDGCHC 5 cut(s) 801, 1365, 1621, 1672, 1943
SexAI ACCWGGT 1 cut(s) 936
SfaNI GCATC 4 cut(s) 203, 514, 1180, 1546
SfcI CTRYAG 2 cut(s) 1160, 2400
SgrAI CRCCGGYG 1 cut(s) 1901
SinI GGWCC 3 cut(s) 219, 1250, 2006
SmiMI CAYNNNNRTG 6 cut(s) 707, 954, 1103, 1902, 1929, 2328
SmlI CTYRAG 1 cut(s) 2372
SmoI CTYRAG 1 cut(s) 2372
SnaBI TACGTA 1 cut(s) 2171
SpeI ACTAGT 1 cut(s) 2537
Sse9I AATT 9 cut(s) 112, 272, 595, 718, 764, 1549, 2257, 2310, 2554
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 5 cut(s) 298, 936, 1297, 1349, 2070
StyI CCWWGG 1 cut(s) 915
TaaI ACNGT 7 cut(s) 443, 1484, 1616, 1928, 2041, 2346, 2596
TaiI ACGT 7 cut(s) 672, 1092, 1596, 1799, 1804, 2173, 2219
TaqII GACCGA 4 cut(s) 207, 846, 1700, 2023
TasI AATT 9 cut(s) 112, 272, 595, 718, 764, 1549, 2257, 2310, 2554
TatI WGTACW 5 cut(s) 822, 1147, 1596, 1812, 2076
TauI GCSGC 4 cut(s) 111, 389, 1541, 1877
TfiI GAWTC 8 cut(s) 200, 546, 663, 965, 1069, 1169, 1377, 2570
Tru1I TTAA 5 cut(s) 1134, 1733, 2046, 2211, 2577
Tru9I TTAA 5 cut(s) 1134, 1733, 2046, 2211, 2577
TscAI CASTG 4 cut(s) 433, 1240, 2551, 2572
TseFI GTSAC 7 cut(s) 379, 424, 1508, 1712, 1745, 2527, 2546
TseI GCWGC 4 cut(s) 1154, 1325, 2092, 2201
Tsp45I GTSAC 7 cut(s) 379, 424, 1508, 1712, 1745, 2527, 2546
TspGWI ACGGA 5 cut(s) 367, 412, 558, 1218, 1700
TspRI CASTG 4 cut(s) 433, 1240, 2551, 2572
Tth111I GACNNNGTC 1 cut(s) 2017
VpaK11BI GGWCC 3 cut(s) 219, 1250, 2006
XapI RAATTY 4 cut(s) 272, 764, 2257, 2554
XceI RCATGY 1 cut(s) 1102
XcmI CCANNNNNNNNNTGG 1 cut(s) 1839
XmiI GTMKAC 3 cut(s) 87, 1278, 1313
ZrmI AGTACT 3 cut(s) 824, 1149, 2078
Zsp2I ATGCAT 1 cut(s) 2325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.