Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

64495617 .. 64497377

Gene Structure 1761 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0513900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGGCCAAGTACCCTTCAGCTAGTATTCTACTTCTTGTGGCTCTAGTTTGTGTTTCAGGAGTTGCACAAACCAGTGGTCATGATATTCACAATGGTATTTGCAAATCTCTCGTGGAGACACGAGGCTATATTTGCCAAGAACATCAAGTAACAACAGAAGATGGTTACATTCTCGGGTTGCAGAGAATTCCATATGGACGGTCTGGTAGAAATTCAGCCACAGATCAGAAGCCGCCTGTTTTGTTGCAACATGGGCTTATAATGAATGCTGCAGCATGGCTACTCAATCCACCGGATCAGGCTTTGGCGTTCATCTTGGCTGACAAAGGGTTTGACGTATGGCTTGCTAATTCTCGAGGAACGGACTCTAGCCGTGGACACAAATCGCTTACTACTAATGATCCTGCTTATTGGGAATGGACATGGGAACAGTTGGCTGCTTATGATCTTCCTGCGTTGTTCAATTATGTGAACAAGCAAACAGGACAGAAGTCACACTACGTTGGCCATTCCTTGGGAACATTGACAATACTAGCTGCCTTGTCCCAACAAAAATTAAGAAACTCATTGAGATCAGCTGCTTTGCTTACCCCAATTGCTTATCTGGGTCAGATATCCACACTGCTTATAAGAGTTGCTACTCAAACATTTTATGCTGAGCAATTCTACATCGTTGGTGTCCGGGAATTTCCTCCGCTACCGCGATTAGAACGAACTCTGCAGACCACTATTTGCATACAACCGGGCGTGGACTGTTCCAACTTTCTGGCTGCTGTAACAGGTCCAAATTGTTGCCTAAATCCTTCAAGTTTAGATCTTTACTATAATCATACACCACAATCCACTGCCACAAAGAATTTCATACATTTGTCTCAGATGATCAGAAGTGGAACCATAAGAATGTTCGATTACACTCTTCCACTCACAAATCTGCAGCACTACAATACGTTGACTCCTCCGGTGTACAACATGGCAAACATTCAGAAAGACATTCCTCTTTTCGTCAGCTATGGAGGGAGAGATGCACTTTCAGACGTCAACGATGTGAAGACTTTGCTTAATGACCTCAATGATCATGACAAGGACAAGCTTGTCGAACAATACATAGAGGAGTATGCTCATTATGATTTCATTATGGGTGAGAATGCCCGTCAGAAAGTCTATGATCCTCTGCTCGCTTTCTTCAGGCAACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

398

Amino Acids

44.59

Weight (kDa)

6.49

Isoelectric Point (pI)

40.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydro_lipase	PF04083	36 - 96	6.7e-21	Partial alpha/beta-hydrolase lipase region
Abhydrolase_1	PF00561	78 - 204	1e-11	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	260, 629
AasI	GACNNNNNNGTC	1 cut(s)	1091
AatII	GACGTC	1 cut(s)	1038
AccB7I	CCANNNNNTGG	1 cut(s)	514
AccII	CGCG	1 cut(s)	703
AciI	CCGC	3 cut(s)	233, 695, 701
AclWI	GGATC	3 cut(s)	303, 395, 1160
AcoI	YGGCCR	2 cut(s)	3, 505
AcsI	RAATTY	4 cut(s)	186, 211, 686, 856
AcuI	CTGAAG	1 cut(s)	1168
AcyI	GRCGYC	1 cut(s)	1035
AfaI	GTAC	2 cut(s)	11, 965
AfiI	CCNNNNNNNGG	1 cut(s)	514
AgsI	TTSAA	2 cut(s)	463, 807
AluBI	AGCT	5 cut(s)	20, 536, 578, 1008, 1090
AluI	AGCT	5 cut(s)	20, 536, 578, 1008, 1090
Alw26I	GTCTC	2 cut(s)	110, 876
AlwI	GGATC	3 cut(s)	303, 395, 1160
Ama87I	CYCGRG	2 cut(s)	173, 354
AoxI	GGCC	2 cut(s)	3, 505
ApeKI	GCWGC	7 cut(s)	269, 272, 437, 536, 578, 770, 934
ApoI	RAATTY	4 cut(s)	186, 211, 686, 856
ArsI	GACNNNNNNTTYG	4 cut(s)	61, 93, 314, 346
AspS9I	GGNCC	1 cut(s)	782
AsuC2I	CCSGG	2 cut(s)	683, 744
AsuHPI	GGTGA	1 cut(s)	1151
AvaI	CYCGRG	2 cut(s)	173, 354
AvaII	GGWCC	1 cut(s)	782
BalI	TGGCCA	2 cut(s)	5, 507
BarI	GAAGNNNNNNTAC	2 cut(s)	482, 514
BauI	CACGAG	2 cut(s)	110, 120
BbsI	GAAGAC	1 cut(s)	1055
BbvI	GCAGC	7 cut(s)	256, 284, 424, 523, 565, 757, 946
BccI	CCATC	1 cut(s)	155
BceAI	ACGGC	1 cut(s)	357
BcgI	CGANNNNNNTGC	2 cut(s)	91, 125
BclI	TGATCA	2 cut(s)	879, 1072
BcnI	CCSGG	2 cut(s)	683, 744
BcoDI	GTCTC	2 cut(s)	110, 876
BfaI	CTAG	4 cut(s)	21, 44, 369, 533
BfmI	CTRYAG	3 cut(s)	270, 719, 932
BglII	AGATCT	1 cut(s)	814
BisI	GCNGC	8 cut(s)	233, 270, 273, 438, 537, 579, 771, 935
BlpI	GCTNAGC	1 cut(s)	657
BlsI	GCNGC	8 cut(s)	234, 271, 274, 439, 538, 580, 772, 936
Bme1390I	CCNGG	2 cut(s)	683, 744
Bme18I	GGWCC	1 cut(s)	782
BmeT110I	CYCGRG	2 cut(s)	173, 354
BmgT120I	GGNCC	1 cut(s)	782
BmiI	GGNNCC	1 cut(s)	892
BmrFI	CCNGG	2 cut(s)	683, 744
BmsI	GCATC	1 cut(s)	1012
BoxI	GACNNNNGTC	1 cut(s)	490
BpiI	GAAGAC	1 cut(s)	1055
Bpu1102I	GCTNAGC	1 cut(s)	657
BpuMI	CCSGG	2 cut(s)	683, 744
BsaHI	GRCGYC	1 cut(s)	1035
BsaJI	CCNNGG	2 cut(s)	373, 513
BsaWI	WCCGGW	2 cut(s)	292, 958
BsaXI	ACNNNNNCTCC	2 cut(s)	937, 967
Bsc4I	CCNNNNNNNGG	1 cut(s)	514
Bse1I	ACTGG	1 cut(s)	72
BseDI	CCNNGG	2 cut(s)	373, 513
BseLI	CCNNNNNNNGG	1 cut(s)	514
BseMII	CTCAG	2 cut(s)	648, 887
BseNI	ACTGG	1 cut(s)	72
BseRI	GAGGAG	2 cut(s)	945, 1124
BseXI	GCAGC	7 cut(s)	256, 284, 424, 523, 565, 757, 946
Bsh1236I	CGCG	1 cut(s)	703
BshFI	GGCC	2 cut(s)	5, 507
BsiHKCI	CYCGRG	2 cut(s)	173, 354
BsiSI	CCGG	4 cut(s)	293, 682, 743, 959
BslFI	GGGAC	1 cut(s)	529
BslI	CCNNNNNNNGG	1 cut(s)	514
BsmAI	GTCTC	2 cut(s)	110, 876
BsmFI	GGGAC	1 cut(s)	529
BsmI	GAATGC	2 cut(s)	271, 1150
BsnI	GGCC	2 cut(s)	5, 507
BsoBI	CYCGRG	2 cut(s)	173, 354
Bsp1407I	TGTACA	1 cut(s)	963
Bsp143I	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
Bsp1720I	GCTNAGC	1 cut(s)	657
BspACI	CCGC	3 cut(s)	233, 695, 701
BspANI	GGCC	2 cut(s)	5, 507
BspCNI	CTCAG	2 cut(s)	649, 886
BspFNI	CGCG	1 cut(s)	703
BspHI	TCATGA	2 cut(s)	79, 1075
BspLI	GGNNCC	1 cut(s)	892
BspMAI	CTGCAG	3 cut(s)	274, 723, 936
BspPI	GGATC	3 cut(s)	303, 395, 1160
BsrGI	TGTACA	1 cut(s)	963
BsrI	ACTGG	1 cut(s)	72
BssECI	CCNNGG	2 cut(s)	373, 513
BssMI	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
BssNI	GRCGYC	1 cut(s)	1035
BssSI	CACGAG	2 cut(s)	110, 120
BssT1I	CCWWGG	1 cut(s)	513
Bst2BI	CACGAG	2 cut(s)	110, 120
Bst4CI	ACNGT	3 cut(s)	201, 432, 755
Bst6I	CTCTTC	1 cut(s)	921
BstACI	GRCGYC	1 cut(s)	1035
BstAUI	TGTACA	1 cut(s)	963
BstC8I	GCNNGC	2 cut(s)	345, 1176
BstDEI	CTNAG	2 cut(s)	657, 873
BstDSI	CCRYGG	1 cut(s)	373
BstFNI	CGCG	1 cut(s)	703
BstKTI	GATC	9 cut(s)	226, 298, 403, 448, 575, 817, 882, 1075, 1168
BstMAI	GTCTC	2 cut(s)	110, 876
BstMBI	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
BstMWI	GCNNNNNNNGC	2 cut(s)	132, 253
BstPAI	GACNNNNGTC	1 cut(s)	490
BstSCI	CCNGG	2 cut(s)	681, 742
BstSFI	CTRYAG	3 cut(s)	270, 719, 932
BstUI	CGCG	1 cut(s)	703
BstV1I	GCAGC	7 cut(s)	256, 284, 424, 523, 565, 757, 946
BstV2I	GAAGAC	1 cut(s)	1055
BstX2I	RGATCY	1 cut(s)	814
BstXI	CCANNNNNNTGG	1 cut(s)	766
BstYI	RGATCY	1 cut(s)	814
BsuRI	GGCC	2 cut(s)	5, 507
BtgI	CCRYGG	1 cut(s)	373
BtsI	GCAGTG	2 cut(s)	620, 843
BtsIMutI	CAGTG	3 cut(s)	79, 620, 843
Cac8I	GCNNGC	2 cut(s)	345, 1176
CciI	TCATGA	2 cut(s)	79, 1075
Cfr13I	GGNCC	1 cut(s)	782
Csp6I	GTAC	2 cut(s)	10, 964
CviAII	CATG	6 cut(s)	80, 251, 276, 423, 970, 1076
CviQI	GTAC	2 cut(s)	10, 964
DdeI	CTNAG	2 cut(s)	657, 873
DpnI	GATC	9 cut(s)	225, 297, 402, 447, 574, 816, 881, 1074, 1167
DpnII	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
DrdI	GACNNNNNNGTC	1 cut(s)	1091
DseDI	GACNNNNNNGTC	1 cut(s)	1091
EaeI	YGGCCR	2 cut(s)	3, 505
Eam1104I	CTCTTC	1 cut(s)	921
EarI	CTCTTC	1 cut(s)	921
Eco130I	CCWWGG	1 cut(s)	513
Eco32I	GATATC	1 cut(s)	615
Eco47I	GGWCC	1 cut(s)	782
Eco57I	CTGAAG	1 cut(s)	1168
Eco88I	CYCGRG	2 cut(s)	173, 354
EcoRI	GAATTC	1 cut(s)	186
EcoRV	GATATC	1 cut(s)	615
EcoT14I	CCWWGG	1 cut(s)	513
ErhI	CCWWGG	1 cut(s)	513
FaeI	CATG	6 cut(s)	83, 254, 279, 426, 973, 1079
FaqI	GGGAC	1 cut(s)	529
FatI	CATG	6 cut(s)	79, 250, 275, 422, 969, 1075
FauNDI	CATATG	1 cut(s)	193
FbaI	TGATCA	2 cut(s)	879, 1072
Fnu4HI	GCNGC	8 cut(s)	233, 270, 273, 438, 537, 579, 771, 935
Fsp4HI	GCNGC	8 cut(s)	233, 270, 273, 438, 537, 579, 771, 935
FspBI	CTAG	4 cut(s)	21, 44, 369, 533
GluI	GCNGC	8 cut(s)	233, 270, 273, 438, 537, 579, 771, 935
HaeIII	GGCC	2 cut(s)	5, 507
HapII	CCGG	4 cut(s)	293, 682, 743, 959
Hin1I	GRCGYC	1 cut(s)	1035
Hin1II	CATG	6 cut(s)	83, 254, 279, 426, 973, 1079
HincII	GTYRAC	2 cut(s)	951, 1039
HindII	GTYRAC	2 cut(s)	951, 1039
HindIII	AAGCTT	1 cut(s)	1088
HinfI	GANTC	2 cut(s)	365, 952
HpaII	CCGG	4 cut(s)	293, 682, 743, 959
HphI	GGTGA	1 cut(s)	1151
Hpy166II	GTNNAC	6 cut(s)	377, 472, 751, 951, 964, 1039
Hpy188I	TCNGA	7 cut(s)	228, 612, 876, 884, 984, 1033, 1155
Hpy188III	TCNNGA	4 cut(s)	57, 80, 354, 1076
Hpy8I	GTNNAC	6 cut(s)	377, 472, 751, 951, 964, 1039
HpyAV	CCTTC	2 cut(s)	24, 813
HpyCH4III	ACNGT	3 cut(s)	201, 432, 755
HpyCH4IV	ACGT	4 cut(s)	336, 501, 947, 1035
HpyCH4V	TGCA	9 cut(s)	65, 102, 181, 247, 272, 721, 735, 934, 1025
HpyF10VI	GCNNNNNNNGC	2 cut(s)	132, 253
HpyF3I	CTNAG	2 cut(s)	657, 873
HpySE526I	ACGT	4 cut(s)	336, 501, 947, 1035
Hsp92I	GRCGYC	1 cut(s)	1035
Hsp92II	CATG	6 cut(s)	83, 254, 279, 426, 973, 1079
Ksp22I	TGATCA	2 cut(s)	879, 1072
Kzo9I	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
Lsp1109I	GCAGC	7 cut(s)	256, 284, 424, 523, 565, 757, 946
LweI	GCATC	1 cut(s)	1012
MaeI	CTAG	4 cut(s)	21, 44, 369, 533
MaeII	ACGT	4 cut(s)	336, 501, 947, 1035
MaeIII	GTNAC	4 cut(s)	148, 164, 492, 775
MalI	GATC	9 cut(s)	225, 297, 402, 447, 574, 816, 881, 1074, 1167
MboI	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
MboII	GAAGA	5 cut(s)	170, 440, 908, 1060, 1174
MfeI	CAATTG	1 cut(s)	594
MflI	RGATCY	1 cut(s)	814
MlsI	TGGCCA	2 cut(s)	5, 507
MluNI	TGGCCA	2 cut(s)	5, 507
MlyI	GAGTC	2 cut(s)	359, 946
MmeI	TCCRAC	1 cut(s)	783
MnlI	CCTC	9 cut(s)	116, 350, 702, 966, 1005, 1007, 1076, 1102, 1179
Mox20I	TGGCCA	2 cut(s)	5, 507
MscI	TGGCCA	2 cut(s)	5, 507
MseI	TTAA	2 cut(s)	557, 1059
MslI	CAYNNNNRTG	1 cut(s)	899
Msp20I	TGGCCA	2 cut(s)	5, 507
MspA1I	CMGCKG	1 cut(s)	578
MspI	CCGG	4 cut(s)	293, 682, 743, 959
MspR9I	CCNGG	2 cut(s)	683, 744
MunI	CAATTG	1 cut(s)	594
Mva1269I	GAATGC	2 cut(s)	271, 1150
MvnI	CGCG	1 cut(s)	703
MwoI	GCNNNNNNNGC	2 cut(s)	132, 253
NciI	CCSGG	2 cut(s)	683, 744
NdeI	CATATG	1 cut(s)	193
NdeII	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
NlaIII	CATG	6 cut(s)	83, 254, 279, 426, 973, 1079
NlaIV	GGNNCC	1 cut(s)	892
NmuCI	GTSAC	1 cut(s)	492
PaeR7I	CTCGAG	1 cut(s)	354
PagI	TCATGA	2 cut(s)	79, 1075
PctI	GAATGC	2 cut(s)	271, 1150
PflMI	CCANNNNNTGG	1 cut(s)	514
PfoI	TCCNGGA	1 cut(s)	681
PkrI	GCNGC	8 cut(s)	234, 271, 274, 439, 538, 580, 772, 936
PleI	GAGTC	2 cut(s)	359, 946
PpsI	GAGTC	2 cut(s)	359, 946
PshAI	GACNNNNGTC	1 cut(s)	490
PsiI	TTATAA	2 cut(s)	260, 629
PspN4I	GGNNCC	1 cut(s)	892
PspPI	GGNCC	1 cut(s)	782
PstI	CTGCAG	3 cut(s)	274, 723, 936
PsuI	RGATCY	1 cut(s)	814
PvuII	CAGCTG	1 cut(s)	578
RsaI	GTAC	2 cut(s)	11, 965
RsaNI	GTAC	2 cut(s)	10, 964
RseI	CAYNNNNRTG	1 cut(s)	899
SaqAI	TTAA	2 cut(s)	557, 1059
SatI	GCNGC	8 cut(s)	233, 270, 273, 438, 537, 579, 771, 935
Sau3AI	GATC	9 cut(s)	223, 295, 400, 445, 572, 814, 879, 1072, 1165
Sau96I	GGNCC	1 cut(s)	782
SchI	GAGTC	2 cut(s)	359, 946
ScrFI	CCNGG	2 cut(s)	683, 744
SfaNI	GCATC	1 cut(s)	1012
SfcI	CTRYAG	3 cut(s)	270, 719, 932
Sfr274I	CTCGAG	1 cut(s)	354
SinI	GGWCC	1 cut(s)	782
SlaI	CTCGAG	1 cut(s)	354
SmiMI	CAYNNNNRTG	1 cut(s)	899
SmlI	CTYRAG	1 cut(s)	354
SmoI	CTYRAG	1 cut(s)	354
SsiI	CCGC	3 cut(s)	233, 695, 701
SspMI	CTAG	4 cut(s)	21, 44, 369, 533
StyD4I	CCNGG	2 cut(s)	681, 742
StyI	CCWWGG	1 cut(s)	513
TaaI	ACNGT	3 cut(s)	201, 432, 755
TaiI	ACGT	4 cut(s)	339, 504, 950, 1038
TaqI	TCGA	3 cut(s)	355, 906, 1095
TatI	WGTACW	1 cut(s)	963
TauI	GCSGC	1 cut(s)	235
Tru1I	TTAA	2 cut(s)	557, 1059
Tru9I	TTAA	2 cut(s)	557, 1059
TscAI	CASTG	3 cut(s)	79, 627, 850
TseFI	GTSAC	1 cut(s)	492
TseI	GCWGC	7 cut(s)	269, 272, 437, 536, 578, 770, 934
Tsp45I	GTSAC	1 cut(s)	492
TspDTI	ATGAA	4 cut(s)	278, 301, 850, 1120
TspGWI	ACGGA	1 cut(s)	377
TspRI	CASTG	3 cut(s)	79, 627, 850
Van91I	CCANNNNNTGG	1 cut(s)	514
VpaK11BI	GGWCC	1 cut(s)	782
XapI	RAATTY	4 cut(s)	186, 211, 686, 856
XhoI	CTCGAG	1 cut(s)	354
XspI	CTAG	4 cut(s)	21, 44, 369, 533
ZraI	GACGTC	1 cut(s)	1036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.