Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006399.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

21108 .. 24092

Gene Structure 2985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006399.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

atgaaaccaattctcgctcctctttaccctctcaacttgtttctcctcttcgtcaccctactggtgaccggagagtccacaaccatctactctccaaccgatgttatcaaccttagctgtggctcatccggcggcatggaccctgactatgattctcgaacttggattggagatatcaactcgaatctttcccctatagaagttggtagtacatcccaagctttgcaaaccccaggcttctcctcgacttggctgccgtactccacagcacggctttctcactcagaattcacttaccggtttccggtcaatcctggccaaaagttcatccgcttgtatttctgcccagattcatacaacgccgacttcgaccgctccaagtctctcttctctgtcaaagccggtggctacacccttctcaaagacttcaacgcttctgtcactgcagatgctggttattttgacactgcagatgctggttattttgggtcgatgctcaaagaattctgtattaacattgagccggaacaacagaggctgaacatcacattcactcccagcaaagatggatacgcgtttatcaacgggattgaaattatgtccatgcctgcctctctttactacactgcagcccaaggcgatggacctactcttatcggcaccgaaaaccggttccctgtgaaaaacaacaccgctctggagaatatctaccgaatcaacgtcggtggatactcggtctcaccgaatgaagacaccggcatgtaccgcacctggcatcatgcaagtatatatttcggtagctatttcaaatctgaccttcagctcaaattaatccctaactacgctgccccggaagaggtttaccaaacctgcatggggagctgcaatctcaccttggggtttcctgtagatccacaatttaattacctggtgaggcttcatttttgtgagattgtaccaaattatacgatggatggagatggtgtgtttcagatttttatagataaccaaacagcggagcagaaagcggacataatccaatggcgtggaggaaatgggattcccgtatatagagactaccttctgttcgtgcccagtcgtccaaacaagaagaaaggtaaagttgatatcattgttgcactacaatcaaattcgaaatatcgatatacggatgcaatcttgaatgggctcgaaatcttcaaactgaatgacacaaacggcaatctcgccggacccaatcccgacccaccaccgccacctccaccgccaccgccacctccaccgccaccgccaacacagccgttctcaatcccgacacaaacggaaaaaccaaatgtgaagtcgattcctatgcttgctatccttgctggtgtagtttcggtcttatttgttctctccctagtcgcgtttttagtttttaggcgtggaaggaaactcaaggactccatctccagccacaggatgacgaggctagccatgaccactgggtcatttttaccatcttatttgtgtcgttacttttcgctgacagagatcaaagccgccaccaaatgcttcgatgatactttcattattggagctgggggatttggcaacgtatacaaaggattcatcgatggtggaggcactccagttgcaatcaaacggctgaaacccatgtcatcacaagggtcccgcgagtttaggacggaaattgagatgctctctcgactccgccaccgccatttggtgtctcttatcggattttgtgccgatgaaggtgagatgatcttggtgtatgattacatggcacgtgggactcttcgtgaccatctctaccacaatgagattgtttcgatcaaggacaatgaagggtccagtgaacaagactgtggggcgaacgaatccgtgcaagggttgactgggacaatcttctctgagatcatcgatccgattggtagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

647

Amino Acids

71.71

Weight (kDa)

5.82

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	73, 1486
Acc36I	ACCTGC	1 cut(s)	878
AccB1I	GGYRCC	1 cut(s)	659
AccBSI	CCGCTC	2 cut(s)	375, 695
AccI	GTMKAC	1 cut(s)	1599
AccII	CGCG	3 cut(s)	575, 1406, 1677
AclWI	GGATC	2 cut(s)	905, 1922
AcoI	YGGCCR	1 cut(s)	316
AcsI	RAATTY	3 cut(s)	287, 503, 1150
AcuI	CTGAAG	1 cut(s)	803
AcvI	CACGTG	1 cut(s)	1793
AfaI	GTAC	4 cut(s)	211, 260, 764, 957
AflIII	ACRYGT	1 cut(s)	573
AgeI	ACCGGT	2 cut(s)	297, 669
AgsI	TTSAA	5 cut(s)	430, 593, 808, 1183, 1201
AjnI	CCWGG	4 cut(s)	232, 313, 770, 927
AjuI	GAANNNNNNNTTGG	2 cut(s)	371, 403
AluBI	AGCT	6 cut(s)	117, 221, 801, 823, 882, 1580
AluI	AGCT	6 cut(s)	117, 221, 801, 823, 882, 1580
Alw26I	GTCTC	4 cut(s)	387, 742, 1068, 1737
AlwI	GGATC	2 cut(s)	905, 1922
AlwNI	CAGNNNCTG	3 cut(s)	452, 476, 538
AoxI	GGCC	1 cut(s)	316
ApeKI	GCWGC	4 cut(s)	253, 629, 845, 882
ApoI	RAATTY	3 cut(s)	287, 503, 1150
ArsI	GACNNNNNNTTYG	2 cut(s)	1325, 1357
AseI	ATTAAT	1 cut(s)	830
AsiGI	ACCGGT	2 cut(s)	297, 669
AspS9I	GGNCC	5 cut(s)	139, 644, 1232, 1671, 1854
AsuC2I	CCSGG	1 cut(s)	851
AsuHPI	GGTGA	6 cut(s)	46, 76, 732, 883, 943, 1772
AsuII	TTCGAA	1 cut(s)	1154
AsuNHI	GCTAGC	1 cut(s)	1471
AvaII	GGWCC	5 cut(s)	139, 644, 1232, 1671, 1854
BaeGI	GKGCMC	1 cut(s)	1095
BalI	TGGCCA	1 cut(s)	318
BanI	GGYRCC	1 cut(s)	659
BanII	GRGCYC	1 cut(s)	1191
BbrPI	CACGTG	1 cut(s)	1793
BbsI	GAAGAC	1 cut(s)	756
BbvI	GCAGC	4 cut(s)	240, 641, 832, 869
BceAI	ACGGC	5 cut(s)	241, 287, 1234, 1285, 1661
BcgI	CGANNNNNNTGC	4 cut(s)	235, 269, 1333, 1367
BciT130I	CCWGG	4 cut(s)	234, 315, 772, 929
BciVI	GTATCC	2 cut(s)	563, 722
BcnI	CCSGG	1 cut(s)	851
BcoDI	GTCTC	4 cut(s)	387, 742, 1068, 1737
BfaI	CTAG	2 cut(s)	1400, 1472
BfmI	CTRYAG	5 cut(s)	195, 444, 468, 627, 906
BfuAI	ACCTGC	1 cut(s)	878
BfuI	GTATCC	2 cut(s)	563, 722
BisI	GCNGC	6 cut(s)	133, 254, 630, 846, 883, 1542
BlsI	GCNGC	6 cut(s)	134, 255, 631, 847, 884, 1543
Bme1390I	CCNGG	5 cut(s)	234, 315, 772, 851, 929
Bme18I	GGWCC	5 cut(s)	139, 644, 1232, 1671, 1854
BmgT120I	GGNCC	5 cut(s)	139, 644, 1232, 1671, 1854
BmiI	GGNNCC	7 cut(s)	141, 661, 674, 1234, 1672, 1673, 1855
BmrFI	CCNGG	5 cut(s)	234, 315, 772, 851, 929
BmrI	ACTGGG	3 cut(s)	1089, 1494, 1911
BmsI	GCATC	6 cut(s)	439, 463, 483, 784, 1162, 1689
BmtI	GCTAGC	1 cut(s)	1475
BmuI	ACTGGG	3 cut(s)	1089, 1494, 1911
BpiI	GAAGAC	1 cut(s)	756
BplI	GAGNNNNNCTC	2 cut(s)	1688, 1720
BpmI	CTGGAG	3 cut(s)	719, 1435, 1614
Bpu10I	CCTNAGC	1 cut(s)	113
Bpu14I	TTCGAA	1 cut(s)	1154
BpuEI	CTTGAG	1 cut(s)	1421
BpuMI	CCSGG	1 cut(s)	851
Bsa29I	ATCGAT	3 cut(s)	1162, 1614, 1926
BsaAI	YACGTR	1 cut(s)	1793
BsaI	GGTCTC	1 cut(s)	742
BsaJI	CCNNGG	4 cut(s)	232, 634, 849, 894
BsaWI	WCCGGW	4 cut(s)	68, 297, 304, 669
BsaXI	ACNNNNNCTCC	6 cut(s)	538, 568, 969, 999, 1433, 1463
Bse118I	RCCGGY	4 cut(s)	297, 401, 669, 755
Bse1I	ACTGG	6 cut(s)	66, 1095, 1489, 1631, 1857, 1906
BseBI	CCWGG	4 cut(s)	234, 315, 772, 929
BseCI	ATCGAT	3 cut(s)	1162, 1614, 1926
BseDI	CCNNGG	4 cut(s)	232, 634, 849, 894
BseGI	GGATG	6 cut(s)	125, 212, 327, 979, 1177, 1467
BseMII	CTCAG	2 cut(s)	297, 1908
BseNI	ACTGG	6 cut(s)	66, 1095, 1489, 1631, 1857, 1906
BseRI	GAGGAG	3 cut(s)	9, 35, 232
BseSI	GKGCMC	1 cut(s)	1095
BseXI	GCAGC	4 cut(s)	240, 641, 832, 869
BseYI	CCCAGC	2 cut(s)	557, 1580
Bsh1236I	CGCG	3 cut(s)	575, 1406, 1677
Bsh1285I	CGRYCG	1 cut(s)	373
BshFI	GGCC	1 cut(s)	318
BshNI	GGYRCC	1 cut(s)	659
BshTI	ACCGGT	2 cut(s)	297, 669
BshVI	ATCGAT	3 cut(s)	1162, 1614, 1926
BsiEI	CGRYCG	1 cut(s)	373
BslFI	GGGAC	3 cut(s)	1657, 1810, 1918
BsmAI	GTCTC	4 cut(s)	387, 742, 1068, 1737
BsmFI	GGGAC	3 cut(s)	1657, 1810, 1918
BsnI	GGCC	1 cut(s)	318
Bso31I	GGTCTC	1 cut(s)	742
Bsp119I	TTCGAA	1 cut(s)	1154
Bsp1286I	GDGCHC	2 cut(s)	1095, 1191
Bsp143I	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
BspANI	GGCC	1 cut(s)	318
BspCNI	CTCAG	2 cut(s)	296, 1909
BspDI	ATCGAT	3 cut(s)	1162, 1614, 1926
BspFNI	CGCG	3 cut(s)	575, 1406, 1677
BspLI	GGNNCC	7 cut(s)	141, 661, 674, 1234, 1672, 1673, 1855
BspMAI	CTGCAG	3 cut(s)	448, 472, 631
BspMI	ACCTGC	1 cut(s)	878
BspOI	GCTAGC	1 cut(s)	1475
BspPI	GGATC	2 cut(s)	905, 1922
BspT104I	TTCGAA	1 cut(s)	1154
BspT107I	GGYRCC	1 cut(s)	659
BspTNI	GGTCTC	1 cut(s)	742
BsrBI	CCGCTC	2 cut(s)	375, 695
BsrFI	RCCGGY	4 cut(s)	297, 401, 669, 755
BsrI	ACTGG	6 cut(s)	66, 1095, 1489, 1631, 1857, 1906
BssAI	RCCGGY	4 cut(s)	297, 401, 669, 755
BssECI	CCNNGG	4 cut(s)	232, 634, 849, 894
BssMI	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
BssNAI	GTATAC	1 cut(s)	1600
BssT1I	CCWWGG	2 cut(s)	634, 894
Bst1107I	GTATAC	1 cut(s)	1600
Bst2UI	CCWGG	4 cut(s)	234, 315, 772, 929
Bst4CI	ACNGT	1 cut(s)	1871
Bst6I	CTCTTC	4 cut(s)	53, 392, 849, 1806
BstBAI	YACGTR	1 cut(s)	1793
BstBI	TTCGAA	1 cut(s)	1154
BstC8I	GCNNGC	3 cut(s)	609, 1356, 1473
BstDEI	CTNAG	3 cut(s)	113, 283, 1917
BstEII	GGTNACC	1 cut(s)	64
BstF5I	GGATG	6 cut(s)	125, 212, 327, 979, 1177, 1467
BstFNI	CGCG	3 cut(s)	575, 1406, 1677
BstKTI	GATC	6 cut(s)	913, 1536, 1770, 1839, 1923, 1930
BstMAI	GTCTC	4 cut(s)	387, 742, 1068, 1737
BstMBI	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
BstMCI	CGRYCG	1 cut(s)	373
BstMWI	GCNNNNNNNGC	5 cut(s)	129, 765, 879, 1297, 1364
BstNI	CCWGG	4 cut(s)	234, 315, 772, 929
BstNSI	RCATGY	1 cut(s)	763
BstPI	GGTNACC	1 cut(s)	64
BstSCI	CCNGG	5 cut(s)	232, 313, 770, 849, 927
BstSFI	CTRYAG	5 cut(s)	195, 444, 468, 627, 906
BstSLI	GKGCMC	1 cut(s)	1095
BstUI	CGCG	3 cut(s)	575, 1406, 1677
BstV1I	GCAGC	4 cut(s)	240, 641, 832, 869
BstV2I	GAAGAC	1 cut(s)	756
BstX2I	RGATCY	1 cut(s)	910
BstXI	CCANNNNNNTGG	2 cut(s)	641, 1046
BstYI	RGATCY	1 cut(s)	910
BstZ17I	GTATAC	1 cut(s)	1600
Bsu15I	ATCGAT	3 cut(s)	1162, 1614, 1926
BsuI	GTATCC	2 cut(s)	563, 722
BsuRI	GGCC	1 cut(s)	318
BsuTUI	ATCGAT	3 cut(s)	1162, 1614, 1926
BtgZI	GCGATG	1 cut(s)	654
BtsCI	GGATG	6 cut(s)	125, 212, 327, 979, 1177, 1467
BtsI	GCAGTG	3 cut(s)	441, 465, 624
BtsIMutI	CAGTG	5 cut(s)	441, 465, 624, 1482, 1864
BveI	ACCTGC	1 cut(s)	878
Cac8I	GCNNGC	3 cut(s)	609, 1356, 1473
CaiI	CAGNNNCTG	3 cut(s)	452, 476, 538
Cfr10I	RCCGGY	4 cut(s)	297, 401, 669, 755
Cfr13I	GGNCC	5 cut(s)	139, 644, 1232, 1671, 1854
ClaI	ATCGAT	3 cut(s)	1162, 1614, 1926
CsiI	ACCWGGT	1 cut(s)	927
Csp6I	GTAC	4 cut(s)	210, 259, 763, 956
CspAI	ACCGGT	2 cut(s)	297, 669
CspCI	CAANNNNNGTGG	4 cut(s)	385, 420, 706, 741
CviAII	CATG	8 cut(s)	136, 604, 760, 779, 874, 1477, 1657, 1786
CviQI	GTAC	4 cut(s)	210, 259, 763, 956
DdeI	CTNAG	3 cut(s)	113, 283, 1917
DpnI	GATC	6 cut(s)	912, 1535, 1769, 1838, 1922, 1929
DpnII	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
DrdI	GACNNNNNNGTC	2 cut(s)	73, 1486
DseDI	GACNNNNNNGTC	2 cut(s)	73, 1486
EaeI	YGGCCR	1 cut(s)	316
Eam1104I	CTCTTC	4 cut(s)	53, 392, 849, 1806
EarI	CTCTTC	4 cut(s)	53, 392, 849, 1806
EciI	GGCGGA	1 cut(s)	1703
Eco130I	CCWWGG	2 cut(s)	634, 894
Eco24I	GRGCYC	1 cut(s)	1191
Eco31I	GGTCTC	1 cut(s)	742
Eco32I	GATATC	2 cut(s)	175, 1129
Eco47I	GGWCC	5 cut(s)	139, 644, 1232, 1671, 1854
Eco57I	CTGAAG	1 cut(s)	803
Eco72I	CACGTG	1 cut(s)	1793
Eco91I	GGTNACC	1 cut(s)	64
EcoO109I	RGGNCCY	1 cut(s)	1671
EcoO65I	GGTNACC	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	287, 503
EcoRII	CCWGG	4 cut(s)	232, 313, 770, 927
EcoRV	GATATC	2 cut(s)	175, 1129
EcoT14I	CCWWGG	2 cut(s)	634, 894
EcoT38I	GRGCYC	1 cut(s)	1191
ErhI	CCWWGG	2 cut(s)	634, 894
FaeI	CATG	8 cut(s)	139, 607, 763, 782, 877, 1480, 1660, 1789
FalI	AAGNNNNNCTT	2 cut(s)	371, 403
FaqI	GGGAC	3 cut(s)	1657, 1810, 1918
FatI	CATG	8 cut(s)	135, 603, 759, 778, 873, 1476, 1656, 1785
FauI	CCCGC	1 cut(s)	1682
FblI	GTMKAC	1 cut(s)	1599
Fnu4HI	GCNGC	6 cut(s)	133, 254, 630, 846, 883, 1542
FokI	GGATG	6 cut(s)	112, 199, 314, 986, 1184, 1474
FriOI	GRGCYC	1 cut(s)	1191
Fsp4HI	GCNGC	6 cut(s)	133, 254, 630, 846, 883, 1542
FspBI	CTAG	2 cut(s)	1400, 1472
GluI	GCNGC	6 cut(s)	133, 254, 630, 846, 883, 1542
GsaI	CCCAGC	2 cut(s)	561, 1584
GsuI	CTGGAG	3 cut(s)	719, 1435, 1614
HaeIII	GGCC	1 cut(s)	318
Hin1II	CATG	8 cut(s)	139, 607, 763, 782, 877, 1480, 1660, 1789
HincII	GTYRAC	1 cut(s)	1899
HindII	GTYRAC	1 cut(s)	1899
HindIII	AAGCTT	1 cut(s)	219
HphI	GGTGA	6 cut(s)	46, 76, 732, 883, 943, 1772
Hpy166II	GTNNAC	5 cut(s)	78, 862, 1600, 1862, 1899
Hpy188I	TCNGA	6 cut(s)	286, 814, 993, 1742, 1918, 1932
Hpy188III	TCNNGA	7 cut(s)	156, 698, 1180, 1241, 1312, 1707, 1805
Hpy8I	GTNNAC	5 cut(s)	78, 862, 1600, 1862, 1899
Hpy99I	CGWCG	1 cut(s)	725
HpyAV	CCTTC	6 cut(s)	425, 827, 1091, 1422, 1751, 1844
HpyCH4III	ACNGT	1 cut(s)	1871
HpyCH4IV	ACGT	3 cut(s)	720, 1596, 1792
HpyF10VI	GCNNNNNNNGC	5 cut(s)	129, 765, 879, 1297, 1364
HpyF3I	CTNAG	3 cut(s)	113, 283, 1917
HpySE526I	ACGT	3 cut(s)	720, 1596, 1792
Hsp92II	CATG	8 cut(s)	139, 607, 763, 782, 877, 1480, 1660, 1789
KflI	GGGWCCC	1 cut(s)	1671
Kzo9I	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
LmnI	GCTCC	5 cut(s)	22, 380, 879, 1018, 1577
Lsp1109I	GCAGC	4 cut(s)	240, 641, 832, 869
LweI	GCATC	6 cut(s)	439, 463, 483, 784, 1162, 1689
MabI	ACCWGGT	1 cut(s)	927
MaeI	CTAG	2 cut(s)	1400, 1472
MaeII	ACGT	3 cut(s)	720, 1596, 1792
MaeIII	GTNAC	5 cut(s)	52, 64, 439, 1514, 1805
MalI	GATC	6 cut(s)	912, 1535, 1769, 1838, 1922, 1929
MbiI	CCGCTC	2 cut(s)	375, 695
MboI	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
MboII	GAAGA	8 cut(s)	40, 379, 761, 866, 1123, 1189, 1793, 1903
MflI	RGATCY	1 cut(s)	910
MhlI	GDGCHC	2 cut(s)	1095, 1191
MlsI	TGGCCA	1 cut(s)	318
MluI	ACGCGT	1 cut(s)	573
MluNI	TGGCCA	1 cut(s)	318
MlyI	GAGTC	4 cut(s)	83, 1436, 1704, 1792
MmeI	TCCRAC	1 cut(s)	119
Mox20I	TGGCCA	1 cut(s)	318
MscI	TGGCCA	1 cut(s)	318
MseI	TTAA	3 cut(s)	513, 830, 921
MslI	CAYNNNNRTG	2 cut(s)	758, 945
Msp20I	TGGCCA	1 cut(s)	318
MspA1I	CMGCKG	1 cut(s)	1016
MspR9I	CCNGG	5 cut(s)	234, 315, 772, 851, 929
MvaI	CCWGG	4 cut(s)	234, 315, 772, 929
MvnI	CGCG	3 cut(s)	575, 1406, 1677
MwoI	GCNNNNNNNGC	5 cut(s)	129, 765, 879, 1297, 1364
NciI	CCSGG	1 cut(s)	851
NdeII	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
NheI	GCTAGC	1 cut(s)	1471
NlaIII	CATG	8 cut(s)	139, 607, 763, 782, 877, 1480, 1660, 1789
NlaIV	GGNNCC	7 cut(s)	141, 661, 674, 1234, 1672, 1673, 1855
NmuCI	GTSAC	4 cut(s)	52, 64, 439, 1805
NspI	RCATGY	1 cut(s)	763
NspV	TTCGAA	1 cut(s)	1154
PcsI	WCGNNNNNNNCGW	2 cut(s)	366, 740
PfeI	GAWTC	8 cut(s)	152, 184, 350, 714, 1060, 1345, 1608, 1883
PinAI	ACCGGT	2 cut(s)	297, 669
PkrI	GCNGC	6 cut(s)	134, 255, 631, 847, 884, 1543
PleI	GAGTC	4 cut(s)	82, 1436, 1704, 1792
PmaCI	CACGTG	1 cut(s)	1793
PmlI	CACGTG	1 cut(s)	1793
PpsI	GAGTC	4 cut(s)	82, 1436, 1704, 1792
Ppu21I	YACGTR	1 cut(s)	1793
PpuMI	RGGWCCY	1 cut(s)	1671
PshBI	ATTAAT	1 cut(s)	830
Psp5II	RGGWCCY	1 cut(s)	1671
Psp6I	CCWGG	4 cut(s)	232, 313, 770, 927
PspCI	CACGTG	1 cut(s)	1793
PspEI	GGTNACC	1 cut(s)	64
PspFI	CCCAGC	2 cut(s)	557, 1580
PspGI	CCWGG	4 cut(s)	232, 313, 770, 927
PspN4I	GGNNCC	7 cut(s)	141, 661, 674, 1234, 1672, 1673, 1855
PspPI	GGNCC	5 cut(s)	139, 644, 1232, 1671, 1854
PspPPI	RGGWCCY	1 cut(s)	1671
PstI	CTGCAG	3 cut(s)	448, 472, 631
PstNI	CAGNNNCTG	3 cut(s)	452, 476, 538
PsuI	RGATCY	1 cut(s)	910
RsaI	GTAC	4 cut(s)	211, 260, 764, 957
RsaNI	GTAC	4 cut(s)	210, 259, 763, 956
RseI	CAYNNNNRTG	2 cut(s)	758, 945
SaqAI	TTAA	3 cut(s)	513, 830, 921
SatI	GCNGC	6 cut(s)	133, 254, 630, 846, 883, 1542
Sau3AI	GATC	6 cut(s)	910, 1533, 1767, 1836, 1920, 1927
Sau96I	GGNCC	5 cut(s)	139, 644, 1232, 1671, 1854
SchI	GAGTC	4 cut(s)	83, 1436, 1704, 1792
ScrFI	CCNGG	5 cut(s)	234, 315, 772, 851, 929
SduI	GDGCHC	2 cut(s)	1095, 1191
SexAI	ACCWGGT	1 cut(s)	927
SfaNI	GCATC	6 cut(s)	439, 463, 483, 784, 1162, 1689
SfcI	CTRYAG	5 cut(s)	195, 444, 468, 627, 906
SfuI	TTCGAA	1 cut(s)	1154
SinI	GGWCC	5 cut(s)	139, 644, 1232, 1671, 1854
SmiMI	CAYNNNNRTG	2 cut(s)	758, 945
SmlI	CTYRAG	1 cut(s)	1436
SmoI	CTYRAG	1 cut(s)	1436
SspMI	CTAG	2 cut(s)	1400, 1472
StyD4I	CCNGG	5 cut(s)	232, 313, 770, 849, 927
StyI	CCWWGG	2 cut(s)	634, 894
TaaI	ACNGT	1 cut(s)	1871
TaiI	ACGT	3 cut(s)	723, 1599, 1795
TaqII	GACCGA	2 cut(s)	724, 1369
TatI	WGTACW	1 cut(s)	209
TauI	GCSGC	2 cut(s)	135, 1544
TfiI	GAWTC	8 cut(s)	152, 184, 350, 714, 1060, 1345, 1608, 1883
Tru1I	TTAA	3 cut(s)	513, 830, 921
Tru9I	TTAA	3 cut(s)	513, 830, 921
TscAI	CASTG	5 cut(s)	448, 472, 631, 1489, 1864
TseFI	GTSAC	4 cut(s)	52, 64, 439, 1805
TseI	GCWGC	4 cut(s)	253, 629, 845, 882
Tsp45I	GTSAC	4 cut(s)	52, 64, 439, 1805
TspDTI	ATGAA	9 cut(s)	17, 316, 342, 762, 929, 1558, 1600, 1770, 1863
TspGWI	ACGGA	4 cut(s)	1184, 1337, 1703, 1876
TspRI	CASTG	5 cut(s)	448, 472, 631, 1489, 1864
VpaK11BI	GGWCC	5 cut(s)	139, 644, 1232, 1671, 1854
VspI	ATTAAT	1 cut(s)	830
XapI	RAATTY	3 cut(s)	287, 503, 1150
XceI	RCATGY	1 cut(s)	763
XmiI	GTMKAC	1 cut(s)	1599
XspI	CTAG	2 cut(s)	1400, 1472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.