Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002529.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

20481 .. 23072

Gene Structure 2592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002529.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

atgaaaccaattctcgctcctctttaccctttcagcttgtttctcctcttcgtcaccctactggtgaccggagagtccacaaccatctactctccaaccgatcatatcaacctgaattgtggctcatccggcgacctggtctatgcatctcaaacttggagtggagatatcaactcaaagctttcccctatagaagttcgtagtacatcccaagttttgcaatcactaagcttgccgacgagcacccaagtaccgtacgccacggcacggctttctcgctcggaattcacttaccgatttcccgtcagtcccggaaaaaagttcatccgcttgtatttctaccctgattcatacaacgctgacttcgaccgctccaagtctctcttctctgtcaaagccggtggctacacccttctcaaagacttcaacgcttctgtcagtgcagatgctgattatgttcagacgatgcggaaagaattctgtattaacatagagccagaacaacagatgctgaacatcacattcacttcccgcaaagatggatactcgtttatcaacgggattgaaattatgtccatgcctgcctctctttactacactgcagcccaaggcgatgggcctagtcttatcggcaccgaaaaccggtaccctgtgaaaaacaacaccgctctggagaatatctaccgattcaacgtcggtggaatcccggtctcaccgtatgaagacgccggcatgtaccgcacctgggattcatgggacgagatctacttggatagtttcagctcgataacactcagatctgaccttcagctcaaatttgcaagaatccctaactacactgccccggaacatgtttacctaaccggccgatcaatggggctgaacgaaactatcaacaagagctacaatctcacctggcggtttcctgtagatccacaattttattacctggtgaggctccatttttgtgagattgtaccatctacgatggatggagatcgtgtgtttcagatttttatagataaccaaacggcggagcagaaagcggacataatccaatggagtggaggaaatgggattcccctgtatagagactaccttctgttcgtgcccagtcgtccacagaagaagaaaggtaaagttgatatcattgttgcactacaaacaaatcaagactattcgagaactcgatcaaagtatgcaatcttgaatgggctcgaaatcatcaaactgaatgacacaaacggcaatctggccggacccaatcccgatccaccaccgccaccagcgccaccaaggccgttcttaatcccgatagatacggaaaaaccaaatgtgaaaccgccagaaagcactagaaaaccgaagaagaagtcgattcctatgcttgctatccttgccggtgtattctcggtcttgcttgttctttccctagtcgggtttttagttttcaagcgtggaagaaaactcaaggactccagcgcccgccacaggatgacgaggccagccatgaccactggatcacttttaccatcttatttgtgtcgttacttttcactggcagagatcaaagccgccgccaaatacttcgatgatactttcattattggagctgggggatttggcaacgtatacaaaggattcatcgatggtggaggcactccagttgcaatcaaacggctaaaagccatgtcatcacaagggtcccgggagtttagaacggaaattgagatgctctctcgactccgccaccgccatttggtgtctcttatcggattttgtgccgatcaaggtgagatgatcttggtgtacgattacatggctcgtgggactcttcgtgaccatctctaccacactgataatccacctcttccatgggaacatcgacttcaaatttgtattggcgcggcgcaaggtttgcactatcttcacacaggtaccaagggcaccatcattcaccgtgacgtaaagagcacaaacatattattggatgagaaatgggtagccaaggtttcagattttggattgtcaagaaagggcaaaatcaccgtgtccaagacccacattagcacgaaagtgaagggtagttttggatatcttgacccggattactatcgacgtcaacaattaactgagaaatctgatgtgtactccttcggtgtagtgttgtgcgaggtattgtgtggaaggccagctataacaaccgtagagaataatcgagttggcttagctggatgggccaagaagtgtcatcgtaatgggaaactttatcaaattattgacccaaatttaaacggtaagattgcagcacgatgctttcacaaatttgttaccatggcgatgaattgcatagatgataatggagtcaatcgaccttcgatggatgatgttgtgagagggcttcaatatgcattgcagttgcaacagaacaatgaggattatattgattacattgaaaggacgcatgaagataatattgtttcgatcaaggacaatgaagggtccagtgaacaagattgtggggcgaacgaatccgtgcaagggttgactgggacaatcttctctgagatcatcgatccggttggtagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

863

Amino Acids

97.0

Weight (kDa)

8.85

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	73
AatII	GACGTC	1 cut(s)	2122
Acc65I	GGTACC	2 cut(s)	645, 1937
AccB1I	GGYRCC	4 cut(s)	632, 645, 1937, 1946
AccBSI	CCGCTC	2 cut(s)	372, 668
AccI	GTMKAC	1 cut(s)	1632
AccII	CGCG	1 cut(s)	1907
AclWI	GGATC	4 cut(s)	926, 1265, 1528, 2570
AcoI	YGGCCR	2 cut(s)	865, 1254
AcsI	RAATTY	6 cut(s)	284, 476, 815, 1893, 2287, 2324
AcuI	CTGAAG	1 cut(s)	791
AcyI	GRCGYC	2 cut(s)	726, 2119
AfaI	GTAC	9 cut(s)	205, 252, 257, 647, 737, 978, 1811, 1939, 2150
AfiI	CCNNNNNNNGG	9 cut(s)	267, 642, 745, 874, 1033, 1437, 1491, 1759, 2541
AflIII	ACRYGT	1 cut(s)	850
AgeI	ACCGGT	1 cut(s)	642
AgsI	TTSAA	8 cut(s)	427, 566, 691, 1210, 1453, 1892, 2405, 2456
AjnI	CCWGG	4 cut(s)	135, 743, 914, 948
AjuI	GAANNNNNNNTTGG	2 cut(s)	368, 400
AleI	CACNNNNGTG	1 cut(s)	2075
AluBI	AGCT	9 cut(s)	36, 181, 231, 783, 811, 903, 1613, 2195, 2231
AluI	AGCT	9 cut(s)	36, 181, 231, 783, 811, 903, 1613, 2195, 2231
Alw21I	GWGCWC	2 cut(s)	245, 1976
Alw26I	GTCTC	4 cut(s)	384, 715, 1086, 1770
AlwI	GGATC	4 cut(s)	926, 1265, 1528, 2570
AlwNI	CAGNNNCTG	2 cut(s)	449, 511
Ama87I	CYCGRG	1 cut(s)	1707
AoxI	GGCC	7 cut(s)	617, 865, 1254, 1298, 1502, 2189, 2238
ApeKI	GCWGC	2 cut(s)	602, 2306
ApoI	RAATTY	6 cut(s)	284, 476, 815, 1893, 2287, 2324
ArsI	GACNNNNNNTTYG	4 cut(s)	1358, 1390, 1878, 1910
AsiGI	ACCGGT	1 cut(s)	642
Asp700I	GAANNNNTTC	1 cut(s)	476
Asp718I	GGTACC	2 cut(s)	645, 1937
AspLEI	GCGC	4 cut(s)	1291, 1484, 1907, 1912
AspS9I	GGNCC	5 cut(s)	617, 1259, 1704, 2238, 2502
AsuC2I	CCSGG	6 cut(s)	312, 707, 845, 1708, 1709, 2105
AsuHPI	GGTGA	8 cut(s)	46, 76, 705, 904, 964, 1805, 1949, 2038
AvaI	CYCGRG	1 cut(s)	1707
AvaII	GGWCC	3 cut(s)	1259, 1704, 2502
BaeGI	GKGCMC	2 cut(s)	1113, 1949
BaeI	ACNNNNGTAYC	4 cut(s)	234, 267, 1921, 1954
BanI	GGYRCC	4 cut(s)	632, 645, 1937, 1946
BanII	GRGCYC	1 cut(s)	1218
BauI	CACGAG	1 cut(s)	1824
BbsI	GAAGAC	1 cut(s)	729
Bbv12I	GWGCWC	2 cut(s)	245, 1976
BbvI	GCAGC	2 cut(s)	614, 2318
BceAI	ACGGC	6 cut(s)	279, 284, 1047, 1261, 1285, 1694
BcgI	CGANNNNNNTGC	2 cut(s)	1366, 1400
BciT130I	CCWGG	4 cut(s)	137, 745, 916, 950
BciVI	GTATCC	1 cut(s)	536
BcnI	CCSGG	6 cut(s)	312, 707, 845, 1708, 1709, 2105
BcoDI	GTCTC	4 cut(s)	384, 715, 1086, 1770
BfaI	CTAG	3 cut(s)	621, 1356, 1433
BfmI	CTRYAG	3 cut(s)	189, 600, 927
BfoI	RGCGCY	2 cut(s)	1292, 1485
BfuI	GTATCC	1 cut(s)	536
BglI	GCCNNNNNGGC	1 cut(s)	1297
BglII	AGATCT	2 cut(s)	762, 797
BisI	GCNGC	5 cut(s)	603, 1575, 1578, 1908, 2307
BlpI	GCTNAGC	1 cut(s)	2227
BlsI	GCNGC	5 cut(s)	604, 1576, 1579, 1909, 2308
Bme18I	GGWCC	3 cut(s)	1259, 1704, 2502
BmeT110I	CYCGRG	1 cut(s)	1707
BmgT120I	GGNCC	5 cut(s)	617, 1259, 1704, 2238, 2502
BmiI	GGNNCC	9 cut(s)	634, 647, 959, 1261, 1705, 1706, 1939, 1948, 2503
BmrI	ACTGGG	2 cut(s)	1107, 2559
BmsI	GCATC	6 cut(s)	155, 436, 456, 498, 1722, 2303
BmuI	ACTGGG	2 cut(s)	1107, 2559
BpiI	GAAGAC	1 cut(s)	729
BplI	GAGNNNNNCTC	2 cut(s)	1721, 1753
BpmI	CTGGAG	3 cut(s)	692, 1462, 1647
Bpu1102I	GCTNAGC	1 cut(s)	2227
BpuEI	CTTGAG	1 cut(s)	1454
BpuMI	CCSGG	6 cut(s)	312, 707, 845, 1708, 1709, 2105
Bsa29I	ATCGAT	2 cut(s)	1647, 2574
BsaBI	GATNNNNATC	2 cut(s)	996, 2112
BsaHI	GRCGYC	2 cut(s)	726, 2119
BsaI	GGTCTC	1 cut(s)	715
BsaWI	WCCGGW	3 cut(s)	68, 642, 2578
BsaXI	ACNNNNNCTCC	2 cut(s)	987, 1017
Bsc4I	CCNNNNNNNGG	9 cut(s)	267, 642, 745, 874, 1033, 1437, 1491, 1759, 2541
Bse118I	RCCGGY	5 cut(s)	398, 642, 728, 863, 1400
Bse1I	ACTGG	7 cut(s)	66, 1113, 1522, 1563, 1664, 2505, 2554
Bse3DI	GCAATG	1 cut(s)	2411
Bse8I	GATNNNNATC	2 cut(s)	996, 2112
BseBI	CCWGG	4 cut(s)	137, 745, 916, 950
BseCI	ATCGAT	2 cut(s)	1647, 2574
BseGI	GGATG	8 cut(s)	125, 206, 324, 997, 1500, 1996, 2240, 2389
BseJI	GATNNNNATC	2 cut(s)	996, 2112
BseLI	CCNNNNNNNGG	9 cut(s)	267, 642, 745, 874, 1033, 1437, 1491, 1759, 2541
BseMI	GCAATG	1 cut(s)	2411
BseMII	CTCAG	3 cut(s)	808, 2124, 2556
BseNI	ACTGG	7 cut(s)	66, 1113, 1522, 1563, 1664, 2505, 2554
BseRI	GAGGAG	2 cut(s)	9, 35
BseSI	GKGCMC	2 cut(s)	1113, 1949
BseX3I	CGGCCG	1 cut(s)	865
BseXI	GCAGC	2 cut(s)	614, 2318
BseYI	CCCAGC	1 cut(s)	1613
BsgI	GTGCAG	1 cut(s)	462
Bsh1236I	CGCG	1 cut(s)	1907
Bsh1285I	CGRYCG	2 cut(s)	370, 868
BshFI	GGCC	7 cut(s)	619, 867, 1256, 1300, 1504, 2191, 2240
BshNI	GGYRCC	4 cut(s)	632, 645, 1937, 1946
BshTI	ACCGGT	1 cut(s)	642
BshVI	ATCGAT	2 cut(s)	1647, 2574
BsiEI	CGRYCG	2 cut(s)	370, 868
BsiHKAI	GWGCWC	2 cut(s)	245, 1976
BsiHKCI	CYCGRG	1 cut(s)	1707
BsiWI	CGTACG	1 cut(s)	255
BslFI	GGGAC	5 cut(s)	294, 770, 1690, 1843, 2566
BslI	CCNNNNNNNGG	9 cut(s)	267, 642, 745, 874, 1033, 1437, 1491, 1759, 2541
BsmAI	GTCTC	4 cut(s)	384, 715, 1086, 1770
BsmFI	GGGAC	5 cut(s)	294, 770, 1690, 1843, 2566
BsnI	GGCC	7 cut(s)	619, 867, 1256, 1300, 1504, 2191, 2240
Bso31I	GGTCTC	1 cut(s)	715
BsoBI	CYCGRG	1 cut(s)	1707
Bsp1286I	GDGCHC	5 cut(s)	245, 1113, 1218, 1949, 1976
Bsp1720I	GCTNAGC	1 cut(s)	2227
Bsp19I	CCATGG	2 cut(s)	1874, 2334
BspANI	GGCC	7 cut(s)	619, 867, 1256, 1300, 1504, 2191, 2240
BspCNI	CTCAG	3 cut(s)	807, 2125, 2557
BspDI	ATCGAT	2 cut(s)	1647, 2574
BspFNI	CGCG	1 cut(s)	1907
BspLI	GGNNCC	9 cut(s)	634, 647, 959, 1261, 1705, 1706, 1939, 1948, 2503
BspMAI	CTGCAG	1 cut(s)	604
BspPI	GGATC	4 cut(s)	926, 1265, 1528, 2570
BspT107I	GGYRCC	4 cut(s)	632, 645, 1937, 1946
BspTNI	GGTCTC	1 cut(s)	715
BsrBI	CCGCTC	2 cut(s)	372, 668
BsrDI	GCAATG	1 cut(s)	2411
BsrFI	RCCGGY	5 cut(s)	398, 642, 728, 863, 1400
BsrI	ACTGG	7 cut(s)	66, 1113, 1522, 1563, 1664, 2505, 2554
BssAI	RCCGGY	5 cut(s)	398, 642, 728, 863, 1400
BssNAI	GTATAC	1 cut(s)	1633
BssNI	GRCGYC	2 cut(s)	726, 2119
BssSI	CACGAG	1 cut(s)	1824
BssT1I	CCWWGG	6 cut(s)	607, 1295, 1874, 1941, 2007, 2334
Bst1107I	GTATAC	1 cut(s)	1633
Bst2BI	CACGAG	1 cut(s)	1824
Bst2UI	CCWGG	4 cut(s)	137, 745, 916, 950
Bst4CI	ACNGT	6 cut(s)	255, 717, 1961, 2050, 2206, 2297
Bst6I	CTCTTC	4 cut(s)	53, 389, 1839, 1875
BstACI	GRCGYC	2 cut(s)	726, 2119
BstAPI	GCANNNNNTGC	1 cut(s)	1918
BstC8I	GCNNGC	7 cut(s)	233, 582, 730, 1389, 1486, 1506, 2193
BstDEI	CTNAG	5 cut(s)	227, 794, 2133, 2227, 2565
BstDSI	CCRYGG	3 cut(s)	261, 1874, 2334
BstEII	GGTNACC	1 cut(s)	64
BstF5I	GGATG	8 cut(s)	125, 206, 324, 997, 1500, 1996, 2240, 2389
BstFNI	CGCG	1 cut(s)	1907
BstH2I	RGCGCY	2 cut(s)	1292, 1485
BstHHI	GCGC	4 cut(s)	1291, 1484, 1907, 1912
BstMAI	GTCTC	4 cut(s)	384, 715, 1086, 1770
BstMCI	CGRYCG	2 cut(s)	370, 868
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 738, 1288, 1297, 1397, 1918, 2237
BstNI	CCWGG	4 cut(s)	137, 745, 916, 950
BstNSI	RCATGY	2 cut(s)	736, 854
BstPI	GGTNACC	1 cut(s)	64
BstSFI	CTRYAG	3 cut(s)	189, 600, 927
BstSLI	GKGCMC	2 cut(s)	1113, 1949
BstUI	CGCG	1 cut(s)	1907
BstV1I	GCAGC	2 cut(s)	614, 2318
BstV2I	GAAGAC	1 cut(s)	729
BstX2I	RGATCY	3 cut(s)	762, 797, 931
BstXI	CCANNNNNNTGG	2 cut(s)	614, 1064
BstYI	RGATCY	3 cut(s)	762, 797, 931
BstZ17I	GTATAC	1 cut(s)	1633
BstZI	CGGCCG	1 cut(s)	865
Bsu15I	ATCGAT	2 cut(s)	1647, 2574
BsuI	GTATCC	1 cut(s)	536
BsuRI	GGCC	7 cut(s)	619, 867, 1256, 1300, 1504, 2191, 2240
BsuTUI	ATCGAT	2 cut(s)	1647, 2574
BtgI	CCRYGG	3 cut(s)	261, 1874, 2334
BtgZI	GCGATG	2 cut(s)	627, 2354
BtsCI	GGATG	8 cut(s)	125, 206, 324, 997, 1500, 1996, 2240, 2389
BtsI	GCAGTG	2 cut(s)	597, 837
BtsIMutI	CAGTG	7 cut(s)	445, 597, 837, 1515, 1556, 1854, 2512
Cac8I	GCNNGC	7 cut(s)	233, 582, 730, 1389, 1486, 1506, 2193
CaiI	CAGNNNCTG	2 cut(s)	449, 511
CfoI	GCGC	4 cut(s)	1291, 1484, 1907, 1912
Cfr10I	RCCGGY	5 cut(s)	398, 642, 728, 863, 1400
Cfr13I	GGNCC	5 cut(s)	617, 1259, 1704, 2238, 2502
Cfr9I	CCCGGG	1 cut(s)	1707
ClaI	ATCGAT	2 cut(s)	1647, 2574
CseI	GACGC	2 cut(s)	734, 2470
CsiI	ACCWGGT	2 cut(s)	135, 948
Csp6I	GTAC	9 cut(s)	204, 251, 256, 646, 736, 977, 1810, 1938, 2149
CspAI	ACCGGT	1 cut(s)	642
CspCI	CAANNNNNGTGG	4 cut(s)	382, 417, 679, 714
CviQI	GTAC	9 cut(s)	204, 251, 256, 646, 736, 977, 1810, 1938, 2149
DdeI	CTNAG	5 cut(s)	227, 794, 2133, 2227, 2565
DraI	TTTAAA	1 cut(s)	2292
DrdI	GACNNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	1 cut(s)	73
EaeI	YGGCCR	2 cut(s)	865, 1254
EagI	CGGCCG	1 cut(s)	865
Eam1104I	CTCTTC	4 cut(s)	53, 389, 1839, 1875
EarI	CTCTTC	4 cut(s)	53, 389, 1839, 1875
EciI	GGCGGA	2 cut(s)	1049, 1736
EclXI	CGGCCG	1 cut(s)	865
Eco130I	CCWWGG	6 cut(s)	607, 1295, 1874, 1941, 2007, 2334
Eco24I	GRGCYC	1 cut(s)	1218
Eco31I	GGTCTC	1 cut(s)	715
Eco32I	GATATC	3 cut(s)	169, 1147, 2096
Eco47I	GGWCC	3 cut(s)	1259, 1704, 2502
Eco52I	CGGCCG	1 cut(s)	865
Eco57I	CTGAAG	1 cut(s)	791
Eco88I	CYCGRG	1 cut(s)	1707
Eco91I	GGTNACC	1 cut(s)	64
EcoO109I	RGGNCCY	1 cut(s)	1704
EcoO65I	GGTNACC	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	284, 476
EcoRII	CCWGG	4 cut(s)	135, 743, 914, 948
EcoRV	GATATC	3 cut(s)	169, 1147, 2096
EcoT14I	CCWWGG	6 cut(s)	607, 1295, 1874, 1941, 2007, 2334
EcoT22I	ATGCAT	2 cut(s)	148, 2413
EcoT38I	GRGCYC	1 cut(s)	1218
ErhI	CCWWGG	6 cut(s)	607, 1295, 1874, 1941, 2007, 2334
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	5 cut(s)	294, 770, 1690, 1843, 2566
FauI	CCCGC	2 cut(s)	539, 1493
FblI	GTMKAC	1 cut(s)	1632
Fnu4HI	GCNGC	5 cut(s)	603, 1575, 1578, 1908, 2307
FokI	GGATG	8 cut(s)	112, 193, 311, 1004, 1507, 2003, 2247, 2396
FriOI	GRGCYC	1 cut(s)	1218
Fsp4HI	GCNGC	5 cut(s)	603, 1575, 1578, 1908, 2307
FspBI	CTAG	3 cut(s)	621, 1356, 1433
GlaI	GCGC	4 cut(s)	1290, 1483, 1906, 1911
GluI	GCNGC	5 cut(s)	603, 1575, 1578, 1908, 2307
GsaI	CCCAGC	1 cut(s)	1617
GsuI	CTGGAG	3 cut(s)	692, 1462, 1647
HaeII	RGCGCY	2 cut(s)	1292, 1485
HaeIII	GGCC	7 cut(s)	619, 867, 1256, 1300, 1504, 2191, 2240
HgaI	GACGC	2 cut(s)	734, 2470
HhaI	GCGC	4 cut(s)	1291, 1484, 1907, 1912
Hin1I	GRCGYC	2 cut(s)	726, 2119
Hin6I	GCGC	4 cut(s)	1289, 1482, 1905, 1910
HinP1I	GCGC	4 cut(s)	1289, 1482, 1905, 1910
HincII	GTYRAC	2 cut(s)	2123, 2547
HindII	GTYRAC	2 cut(s)	2123, 2547
HindIII	AAGCTT	2 cut(s)	179, 229
HphI	GGTGA	8 cut(s)	46, 76, 705, 904, 964, 1805, 1949, 2038
Hpy166II	GTNNAC	9 cut(s)	78, 856, 1121, 1633, 1810, 2123, 2149, 2510, 2547
Hpy188I	TCNGA	9 cut(s)	283, 462, 797, 802, 1011, 1775, 2017, 2143, 2566
Hpy8I	GTNNAC	9 cut(s)	78, 856, 1121, 1633, 1810, 2123, 2149, 2510, 2547
Hpy99I	CGWCG	3 cut(s)	241, 698, 2121
HpyAV	CCTTC	8 cut(s)	422, 815, 1109, 2074, 2164, 2181, 2385, 2492
HpyCH4III	ACNGT	6 cut(s)	255, 717, 1961, 2050, 2206, 2297
HpyCH4IV	ACGT	4 cut(s)	693, 1629, 1965, 2119
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 738, 1288, 1297, 1397, 1918, 2237
HpyF3I	CTNAG	5 cut(s)	227, 794, 2133, 2227, 2565
HpySE526I	ACGT	4 cut(s)	693, 1629, 1965, 2119
Hsp92I	GRCGYC	2 cut(s)	726, 2119
HspAI	GCGC	4 cut(s)	1289, 1482, 1905, 1910
KflI	GGGWCCC	1 cut(s)	1704
KpnI	GGTACC	2 cut(s)	649, 1941
KroI	GCCGGC	1 cut(s)	728
KroNI	GCCGGC	1 cut(s)	730
LmnI	GCTCC	5 cut(s)	22, 377, 963, 1036, 1610
Lsp1109I	GCAGC	2 cut(s)	614, 2318
LweI	GCATC	6 cut(s)	155, 436, 456, 498, 1722, 2303
MabI	ACCWGGT	2 cut(s)	135, 948
MaeI	CTAG	3 cut(s)	621, 1356, 1433
MaeII	ACGT	4 cut(s)	693, 1629, 1965, 2119
MaeIII	GTNAC	6 cut(s)	52, 64, 1547, 1838, 1961, 2329
MbiI	CCGCTC	2 cut(s)	372, 668
MflI	RGATCY	3 cut(s)	762, 797, 931
MhlI	GDGCHC	5 cut(s)	245, 1113, 1218, 1949, 1976
MlyI	GAGTC	5 cut(s)	83, 1469, 1737, 1825, 2373
MmeI	TCCRAC	1 cut(s)	119
Mph1103I	ATGCAT	2 cut(s)	148, 2413
MroNI	GCCGGC	1 cut(s)	728
MroXI	GAANNNNTTC	1 cut(s)	476
MseI	TTAA	4 cut(s)	486, 1307, 2129, 2291
MslI	CAYNNNNRTG	4 cut(s)	966, 2075, 2256, 2339
MteI	GCGCNGCGC	1 cut(s)	1908
MvaI	CCWGG	4 cut(s)	137, 745, 916, 950
MvnI	CGCG	1 cut(s)	1907
MwoI	GCNNNNNNNGC	7 cut(s)	129, 738, 1288, 1297, 1397, 1918, 2237
NaeI	GCCGGC	1 cut(s)	730
NciI	CCSGG	6 cut(s)	312, 707, 845, 1708, 1709, 2105
NcoI	CCATGG	2 cut(s)	1874, 2334
NgoMIV	GCCGGC	1 cut(s)	728
NlaIV	GGNNCC	9 cut(s)	634, 647, 959, 1261, 1705, 1706, 1939, 1948, 2503
NmuCI	GTSAC	4 cut(s)	52, 64, 1838, 1961
NsiI	ATGCAT	2 cut(s)	148, 2413
NspI	RCATGY	2 cut(s)	736, 854
OliI	CACNNNNGTG	1 cut(s)	2075
PciI	ACATGT	1 cut(s)	850
PcsI	WCGNNNNNNNCGW	1 cut(s)	363
PdiI	GCCGGC	1 cut(s)	730
PdmI	GAANNNNTTC	1 cut(s)	476
PfeI	GAWTC	9 cut(s)	347, 687, 702, 749, 825, 1078, 1378, 1641, 2531
Pfl23II	CGTACG	1 cut(s)	255
PflFI	GACNNNGTC	1 cut(s)	137
PfoI	TCCNGGA	1 cut(s)	310
PinAI	ACCGGT	1 cut(s)	642
PkrI	GCNGC	5 cut(s)	604, 1576, 1579, 1909, 2308
PleI	GAGTC	5 cut(s)	82, 1469, 1737, 1825, 2372
PpsI	GAGTC	5 cut(s)	82, 1469, 1737, 1825, 2372
PpuMI	RGGWCCY	1 cut(s)	1704
PscI	ACATGT	1 cut(s)	850
Psp5II	RGGWCCY	1 cut(s)	1704
Psp6I	CCWGG	4 cut(s)	135, 743, 914, 948
PspEI	GGTNACC	1 cut(s)	64
PspFI	CCCAGC	1 cut(s)	1613
PspGI	CCWGG	4 cut(s)	135, 743, 914, 948
PspLI	CGTACG	1 cut(s)	255
PspN4I	GGNNCC	9 cut(s)	634, 647, 959, 1261, 1705, 1706, 1939, 1948, 2503
PspPI	GGNCC	5 cut(s)	617, 1259, 1704, 2238, 2502
PspPPI	RGGWCCY	1 cut(s)	1704
PstI	CTGCAG	1 cut(s)	604
PstNI	CAGNNNCTG	2 cut(s)	449, 511
PsuI	RGATCY	3 cut(s)	762, 797, 931
PsyI	GACNNNGTC	1 cut(s)	137
RsaI	GTAC	9 cut(s)	205, 252, 257, 647, 737, 978, 1811, 1939, 2150
RsaNI	GTAC	9 cut(s)	204, 251, 256, 646, 736, 977, 1810, 1938, 2149
RseI	CAYNNNNRTG	4 cut(s)	966, 2075, 2256, 2339
SaqAI	TTAA	4 cut(s)	486, 1307, 2129, 2291
SatI	GCNGC	5 cut(s)	603, 1575, 1578, 1908, 2307
Sau96I	GGNCC	5 cut(s)	617, 1259, 1704, 2238, 2502
SchI	GAGTC	5 cut(s)	83, 1469, 1737, 1825, 2373
SduI	GDGCHC	5 cut(s)	245, 1113, 1218, 1949, 1976
SexAI	ACCWGGT	2 cut(s)	135, 948
SfaNI	GCATC	6 cut(s)	155, 436, 456, 498, 1722, 2303
SfcI	CTRYAG	3 cut(s)	189, 600, 927
SinI	GGWCC	3 cut(s)	1259, 1704, 2502
SmaI	CCCGGG	1 cut(s)	1709
SmiMI	CAYNNNNRTG	4 cut(s)	966, 2075, 2256, 2339
SmlI	CTYRAG	1 cut(s)	1469
SmoI	CTYRAG	1 cut(s)	1469
SspI	AATATT	1 cut(s)	2476
SspMI	CTAG	3 cut(s)	621, 1356, 1433
StyI	CCWWGG	6 cut(s)	607, 1295, 1874, 1941, 2007, 2334
TaaI	ACNGT	6 cut(s)	255, 717, 1961, 2050, 2206, 2297
TaiI	ACGT	4 cut(s)	696, 1632, 1968, 2122
TaqII	GACCGA	1 cut(s)	1402
TatI	WGTACW	2 cut(s)	203, 2148
TauI	GCSGC	3 cut(s)	1577, 1580, 1910
TfiI	GAWTC	9 cut(s)	347, 687, 702, 749, 825, 1078, 1378, 1641, 2531
Tru1I	TTAA	4 cut(s)	486, 1307, 2129, 2291
Tru9I	TTAA	4 cut(s)	486, 1307, 2129, 2291
TscAI	CASTG	7 cut(s)	445, 604, 844, 1522, 1563, 1861, 2512
TseFI	GTSAC	4 cut(s)	52, 64, 1838, 1961
TseI	GCWGC	2 cut(s)	602, 2306
Tsp45I	GTSAC	4 cut(s)	52, 64, 1838, 1961
TspGWI	ACGGA	3 cut(s)	1337, 1736, 2524
TspMI	CCCGGG	1 cut(s)	1707
TspRI	CASTG	7 cut(s)	445, 604, 844, 1522, 1563, 1861, 2512
Tth111I	GACNNNGTC	1 cut(s)	137
VpaK11BI	GGWCC	3 cut(s)	1259, 1704, 2502
XapI	RAATTY	6 cut(s)	284, 476, 815, 1893, 2287, 2324
XceI	RCATGY	2 cut(s)	736, 854
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1872
XmaI	CCCGGG	1 cut(s)	1707
XmiI	GTMKAC	1 cut(s)	1632
XmnI	GAANNNNTTC	1 cut(s)	476
XspI	CTAG	3 cut(s)	621, 1356, 1433
ZraI	GACGTC	1 cut(s)	2120
Zsp2I	ATGCAT	2 cut(s)	148, 2413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.