pycom17g06210

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
4359392 .. 4360215
824 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06210.1

Sequence Viewer

Length: 582 bp
ATGCTCCACTACTTTTGTTTTTTTAATTATGAATGGAATTTTGTTAAGCTTACGACAATAAGCAGCAACAGATTTCCCCGTTTCCAAATTGGAGCAAAACACCTTACCATGAAACCCAATCTTGCTCATCTGTTCCTTACCCTGTTTATGCAAATCATAACCCTACACGTGGCCGGAGACTCACCCTCTGTCTACAAACCGTCAACCAACAGGACGGACGAACTTGGAGTGGCGATATCAACTCAAAATTCTTCCCCTCCCAAGCAGCTGGCAGCTCATCCGTATTCAAAGCAGCAACCCCGATCTCCTCCTCCAGCCAAGTGCCTTACACCACAGCTCGGCTCTCTCGCTCCGAATTTACGTACACGTTTCCACTCACCAGCGGCCAAAAGTTCATCCGCTTGTACTTCTACCCCACTTCCTACGCCGTCGAGTTCGACCGATCTAAATCACTCTTCTCAGTCGAAGCCGGCGGCTTTACCCTTCTCCGCGACTTCAACGCATCCGTCACCGCCGACGCTTCCTGGTCGGAGACAGTATCAAGGGAGTTCTGTCTCAACATTGCATCCGAACAGAGCTTGA

Protein Analysis

194

Amino Acids

21.11

Weight (kDa)

10.26

Isoelectric Point (pI)

62.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 491
AciI CCGC 5 cut(s) 383, 399, 473, 489, 512
AcoI YGGCCR 2 cut(s) 171, 384
AcsI RAATTY 3 cut(s) 37, 247, 355
AcvI CACGTG 1 cut(s) 169
AfaI GTAC 2 cut(s) 364, 406
AfiI CCNNNNNNNGG 2 cut(s) 169, 338
AflIII ACRYGT 2 cut(s) 166, 365
AgsI TTSAA 2 cut(s) 288, 498
AjnI CCWGG 1 cut(s) 523
AluBI AGCT 5 cut(s) 49, 268, 275, 337, 578
AluI AGCT 5 cut(s) 49, 268, 275, 337, 578
Alw26I GTCTC 3 cut(s) 171, 526, 559
AoxI GGCC 2 cut(s) 171, 384
ApeKI GCWGC 4 cut(s) 63, 265, 272, 292
ApoI RAATTY 3 cut(s) 37, 247, 355
AsuHPI GGTGA 3 cut(s) 174, 369, 501
BbrPI CACGTG 1 cut(s) 169
BbvI GCAGC 4 cut(s) 75, 277, 284, 304
BceAI ACGGC 1 cut(s) 412
BciT130I CCWGG 1 cut(s) 525
BcoDI GTCTC 3 cut(s) 171, 526, 559
BisI GCNGC 6 cut(s) 64, 266, 273, 293, 384, 474
BlsI GCNGC 6 cut(s) 65, 267, 274, 294, 385, 475
Bme1390I CCNGG 1 cut(s) 525
BmrFI CCNGG 1 cut(s) 525
BmsI GCATC 2 cut(s) 511, 574
BpmI CTGGAG 1 cut(s) 297
BsaAI YACGTR 2 cut(s) 169, 362
BsaBI GATNNNNATC 1 cut(s) 447
Bsc4I CCNNNNNNNGG 2 cut(s) 169, 338
Bse118I RCCGGY 1 cut(s) 469
Bse3DI GCAATG 1 cut(s) 560
Bse8I GATNNNNATC 1 cut(s) 447
BseBI CCWGG 1 cut(s) 525
BseGI GGATG 4 cut(s) 277, 395, 502, 565
BseJI GATNNNNATC 1 cut(s) 447
BseLI CCNNNNNNNGG 2 cut(s) 169, 338
BseMI GCAATG 1 cut(s) 560
BseMII CTCAG 1 cut(s) 473
BseRI GAGGAG 2 cut(s) 297, 300
BseXI GCAGC 4 cut(s) 75, 277, 284, 304
Bsh1236I CGCG 1 cut(s) 491
Bsh1285I CGRYCG 1 cut(s) 441
BshFI GGCC 2 cut(s) 173, 386
BsiEI CGRYCG 1 cut(s) 441
BsiSI CCGG 2 cut(s) 174, 470
BslI CCNNNNNNNGG 2 cut(s) 169, 338
BsmAI GTCTC 3 cut(s) 171, 526, 559
BsnI GGCC 2 cut(s) 173, 386
Bsp143I GATC 2 cut(s) 302, 442
BspACI CCGC 5 cut(s) 383, 399, 473, 489, 512
BspANI GGCC 2 cut(s) 173, 386
BspCNI CTCAG 1 cut(s) 472
BspFNI CGCG 1 cut(s) 491
BsrDI GCAATG 1 cut(s) 560
BsrFI RCCGGY 1 cut(s) 469
BssAI RCCGGY 1 cut(s) 469
BssMI GATC 2 cut(s) 302, 442
Bst2UI CCWGG 1 cut(s) 525
Bst4CI ACNGT 2 cut(s) 201, 537
Bst6I CTCTTC 1 cut(s) 460
BstBAI YACGTR 2 cut(s) 169, 362
BstC8I GCNNGC 2 cut(s) 270, 471
BstDEI CTNAG 1 cut(s) 459
BstF5I GGATG 4 cut(s) 277, 395, 502, 565
BstFNI CGCG 1 cut(s) 491
BstKTI GATC 2 cut(s) 305, 445
BstMAI GTCTC 3 cut(s) 171, 526, 559
BstMBI GATC 2 cut(s) 302, 442
BstMCI CGRYCG 1 cut(s) 441
BstNI CCWGG 1 cut(s) 525
BstSCI CCNGG 1 cut(s) 523
BstSNI TACGTA 1 cut(s) 362
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 4 cut(s) 75, 277, 284, 304
BstXI CCANNNNNNTGG 1 cut(s) 268
BsuRI GGCC 2 cut(s) 173, 386
BtsCI GGATG 4 cut(s) 277, 395, 502, 565
Cac8I GCNNGC 2 cut(s) 270, 471
Cfr10I RCCGGY 1 cut(s) 469
CseI GACGC 1 cut(s) 526
Csp6I GTAC 2 cut(s) 363, 405
CspCI CAANNNNNGTGG 1 cut(s) 31
CviAII CATG 1 cut(s) 109
CviQI GTAC 2 cut(s) 363, 405
DdeI CTNAG 1 cut(s) 459
DpnI GATC 2 cut(s) 304, 444
DpnII GATC 2 cut(s) 302, 442
EaeI YGGCCR 2 cut(s) 171, 384
Eam1104I CTCTTC 1 cut(s) 460
EarI CTCTTC 1 cut(s) 460
Eco105I TACGTA 1 cut(s) 362
Eco32I GATATC 1 cut(s) 237
Eco72I CACGTG 1 cut(s) 169
EcoRII CCWGG 1 cut(s) 523
EcoRV GATATC 1 cut(s) 237
FaeI CATG 1 cut(s) 112
FaiI YATR 4 cut(s) 30, 110, 149, 158
FatI CATG 1 cut(s) 108
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 6 cut(s) 64, 266, 273, 293, 384, 474
FokI GGATG 4 cut(s) 264, 382, 489, 552
Fsp4HI GCNGC 6 cut(s) 64, 266, 273, 293, 384, 474
GluI GCNGC 6 cut(s) 64, 266, 273, 293, 384, 474
GsuI CTGGAG 1 cut(s) 297
HaeIII GGCC 2 cut(s) 173, 386
HapII CCGG 2 cut(s) 174, 470
HgaI GACGC 1 cut(s) 526
Hin1II CATG 1 cut(s) 112
HincII GTYRAC 1 cut(s) 204
HindII GTYRAC 1 cut(s) 204
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 1 cut(s) 179
HpaII CCGG 2 cut(s) 174, 470
HphI GGTGA 3 cut(s) 174, 369, 501
Hpy166II GTNNAC 3 cut(s) 193, 204, 365
Hpy188I TCNGA 3 cut(s) 354, 531, 570
Hpy8I GTNNAC 3 cut(s) 193, 204, 365
Hpy99I CGWCG 2 cut(s) 433, 520
HpyAV CCTTC 1 cut(s) 493
HpyCH4III ACNGT 2 cut(s) 201, 537
HpyCH4IV ACGT 3 cut(s) 168, 361, 367
HpyCH4V TGCA 2 cut(s) 151, 565
HpyF3I CTNAG 1 cut(s) 459
HpySE526I ACGT 3 cut(s) 168, 361, 367
Hsp92II CATG 1 cut(s) 112
KroI GCCGGC 1 cut(s) 469
KroNI GCCGGC 1 cut(s) 471
Kzo9I GATC 2 cut(s) 302, 442
LmnI GCTCC 3 cut(s) 9, 92, 355
LpnPI CCDG 9 cut(s) 155, 187, 196, 254, 327, 393, 483, 510, 537
Lsp1109I GCAGC 4 cut(s) 75, 277, 284, 304
LweI GCATC 2 cut(s) 511, 574
MaeII ACGT 3 cut(s) 168, 361, 367
MaeIII GTNAC 1 cut(s) 507
MalI GATC 2 cut(s) 304, 444
MboI GATC 2 cut(s) 302, 442
MboII GAAGA 2 cut(s) 243, 447
MluCI AATT 5 cut(s) 25, 37, 87, 247, 355
MlyI GAGTC 1 cut(s) 173
MmeI TCCRAC 1 cut(s) 509
MnlI CCTC 4 cut(s) 196, 267, 318, 321
MroNI GCCGGC 1 cut(s) 469
MseI TTAA 2 cut(s) 24, 45
MspA1I CMGCKG 2 cut(s) 268, 383
MspI CCGG 2 cut(s) 174, 470
MspR9I CCNGG 1 cut(s) 525
MvaI CCWGG 1 cut(s) 525
MvnI CGCG 1 cut(s) 491
NaeI GCCGGC 1 cut(s) 471
NdeII GATC 2 cut(s) 302, 442
NgoMIV GCCGGC 1 cut(s) 469
NlaIII CATG 1 cut(s) 112
NmeAIII GCCGAG 1 cut(s) 318
NmuCI GTSAC 1 cut(s) 507
PdiI GCCGGC 1 cut(s) 471
PkrI GCNGC 6 cut(s) 65, 267, 274, 294, 385, 475
PleI GAGTC 1 cut(s) 173
PmaCI CACGTG 1 cut(s) 169
PmlI CACGTG 1 cut(s) 169
PpsI GAGTC 1 cut(s) 173
Ppu21I YACGTR 2 cut(s) 169, 362
Psp6I CCWGG 1 cut(s) 523
PspCI CACGTG 1 cut(s) 169
PspGI CCWGG 1 cut(s) 523
PvuII CAGCTG 1 cut(s) 268
RsaI GTAC 2 cut(s) 364, 406
RsaNI GTAC 2 cut(s) 363, 405
SaqAI TTAA 2 cut(s) 24, 45
SatI GCNGC 6 cut(s) 64, 266, 273, 293, 384, 474
Sau3AI GATC 2 cut(s) 302, 442
SchI GAGTC 1 cut(s) 173
ScrFI CCNGG 1 cut(s) 525
SetI ASST 9 cut(s) 51, 105, 171, 270, 277, 339, 364, 370, 580
SfaNI GCATC 2 cut(s) 511, 574
SnaBI TACGTA 1 cut(s) 362
Sse9I AATT 5 cut(s) 25, 37, 87, 247, 355
SsiI CCGC 5 cut(s) 383, 399, 473, 489, 512
StyD4I CCNGG 1 cut(s) 523
TaaI ACNGT 2 cut(s) 201, 537
TaiI ACGT 3 cut(s) 171, 364, 370
TaqI TCGA 3 cut(s) 431, 437, 464
TaqII GACCGA 1 cut(s) 455
TasI AATT 5 cut(s) 25, 37, 87, 247, 355
TatI WGTACW 1 cut(s) 404
TauI GCSGC 2 cut(s) 386, 476
Tru1I TTAA 2 cut(s) 24, 45
Tru9I TTAA 2 cut(s) 24, 45
TseFI GTSAC 1 cut(s) 507
TseI GCWGC 4 cut(s) 63, 265, 272, 292
Tsp45I GTSAC 1 cut(s) 507
TspDTI ATGAA 3 cut(s) 45, 125, 384
TspGWI ACGGA 3 cut(s) 230, 270, 495
XapI RAATTY 3 cut(s) 37, 247, 355
XmiI GTMKAC 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.