Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

11467698 .. 11470355

Gene Structure 2658 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ55380

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGAAACCAATTCTCGCTCCTCTTTACCCTTTCAGCTTGTTTCTCCTCTTCGTCACCCTACTGGTGACCGGAGAGTCCACAACCATCTACTCTCCAACCGATGTTATCAACCTTAGCTGTGGCTCATCCGGCGGCATGGACACTGACTATGATTCTCGAACTTGGATTGGAGATATCAACTCGAATCTTTCCCCTATAGAAGTTGGTAGTACATCCCAAGCTTTGCAAAACCCAGGCATCTCCTCGACTTGGCTGCCGTACTCCACAGCACGGCTTTCACACTCAGAATTCACTTACCGGTTTCCTGTCAATCCTGGCCAAAAGTTCATCCGCTTGTATTTCTACCCAGAGTCATACAACGCCGACTTCGACCGCTCCAAGTCTCTCTTCTCTGTCAAAGCCGGTGGCTACACCCTTCTCAAAGACTTCAACGCTTCTGTCACTGCAGATGCTGGTTATTTTGACACTGCAGTTGCTGGTTATTTAGAGACGATGCTCAAAGAATTCTGTATTAACATTGAGCCGGAACAACAGAGGCTGAACGTCACATTCACTCCCAGCAAAGATGGATACGCGTTTATCAACGGGATTGAAATTATCTCCATGCCTGCCTCTCTTTACTACACTGCAGCCCAAGGCGATGGACCTACTCTTATCGGCACCAAAAACCGGCACCCTGTGAAAAACAACACCGCTCTGGAGAATATCTACCGATTCAACGTCGGTGGAAGCCCGGTCTCACCGAATGAAGACACCGGCATGTACCGCACCTGGGATTCAACGGACGACCTATACTTGGATAAGTCAAGTATAGATTTCAGCTTGATGCCACACATCAATAATGTTCGTCTCAAATTTGCAAGAATCCCTAACTACACTGCCCCGGAAGAGGTTTACCAAACCGGCATGGAGAGCTACAATCCCATCTGGGGGTTTCCTGTAGATCCACAATTTAATTACCTGGTGAGGCTTCATTTTTGTGAGATTGTACCAAATTATACGATGGATGGAGATCGTGTGTTTCAGATTTTTATAAATAACCAAACAGCGGAGCAGAAAGCGGACATAATCCAATGGAGTGGAGGAAATGGAATTCCCGTATATAGAGACTACCTTGTGTTCGTGCCCAGTCGTCCAAACAAGAAGAAAGGTAAAGTTGATATCATTGTTGCACTACAACCAAATTCGAAATCTAGATATAAGCATGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAACGGCAATCTCGCCGGACCCAATCCTGACCCACCGCCACCACCGCCACCACCGCCACCGCCACCACCGCCACCACCGCCACCGCCACCACCGCCACTACCGCCACTACCGCCACTACCGCCACCGCCACTACCGCCACCGCCACCACCGCCGTTCTCAATCCCGACACAAACGGAACAACCAAATGTGAAACCGCTTCCTATGCTTCCTACCCTTGCCGGTGCAGTTTCGGTCTTACTTGTTCTTTCCTTAGTCGTGTTTTTACAATGCAGGCGCGGAACAGAACTCAAGGACTCCAGCTCTAGCCACAGGATGACGAGGCCAGCCATGACCAGTAGGTCACATTTACCTTCTTATTTGTGTCGTTACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAATACTTCGATGATACTTTCATTATTGGAGCTGGGGGATTTGGCAACGTCTACAAAGGATTCATCGATGGTGGAGGCACTCCAGTTGCAATCAAACGGCTGAAAGCCATGTCATCACAAGGGTCCCGCGAGTTTAGGACGGAAATTGAGATGCTCTCTCGACTCCGCCACCGCCATTTGGTGTCTCTTATCGGATTTTGTGCCGATAAAGGTGAGATGATCTTGGTGTACGATTACATGGCACGTGGGACTCTTCGTGACCATCTCTACCACACTGATAATCCACCTCTTCCATGGGAACAAAGGCTTCAAATTTGTATTGGCGCGGCGCAAGGTTTGCACTATCTTCACACAGGTACCAAGGGCACCATCATTCACCGTGACATAAAGAGCACAAACATATTATTGGATGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCGAGAGAGGGCACAATGACCATGTCTAAGACCCACATTAGCACGAAGGTGAAGGGTAGTTTTGGATATCTTGACCCGGATTACTATCGACGTCAACAATTAACTGAGAAGTCTGATGTGTACTCCTTCGGTGTAGTGTTGTGCGAGGTATTGTGTGGAAGGCCACCTATAACAACCGTAGATAATAATCGAGTTGGCTTAGTTGGATGGGCCAAGAAGTGTCATCGTAATGGGAAACTTGATCAAATTATTGACCCAAATTTAAACGGTAAGATTGCGGCACGATGCTTGCACAAATTTGTTACCATGGCGATGAATTGCATAGATGATAACGGAGTCAATCGACCTTCGATGGATGATGTTGTGAGAGGGCTTCAATTTGCATTGCAGTTGCAACAGAACAAAGAGGATTATATTGATTACGTTGAAAGGACGCATGAAGATATGATTGTTTCGATCAAGGACAATGAAGGGTCCAGTGAACAAGATTGTGGGGCGAACGAATCCGTGCAAGGGTTGACTGGGACTATCTTCTCTGAGATCATCGATCCGGTTGGTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

885

Amino Acids

98.49

Weight (kDa)

6.54

Isoelectric Point (pI)

45.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 412	5.1e-29	Malectin-like domain
Malectin	PF11721	283 - 372	1.3e-09	Malectin domain
Pkinase	PF00069	557 - 820	2e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	558 - 821	3.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1034
AasI	GACNNNNNNGTC	2 cut(s)	73, 1585
AatII	GACGTC	1 cut(s)	2188
Acc65I	GGTACC	1 cut(s)	2003
AccB1I	GGYRCC	4 cut(s)	659, 672, 2003, 2012
AccBSI	CCGCTC	2 cut(s)	375, 695
AccI	GTMKAC	1 cut(s)	1698
AccII	CGCG	4 cut(s)	575, 1524, 1776, 1973
AclWI	GGATC	2 cut(s)	938, 2636
AcoI	YGGCCR	1 cut(s)	316
AcsI	RAATTY	8 cut(s)	287, 503, 854, 1092, 1183, 1959, 2353, 2390
AcvI	CACGTG	1 cut(s)	1892
AcyI	GRCGYC	1 cut(s)	2185
AdeI	CACNNNGTG	1 cut(s)	679
AfaI	GTAC	7 cut(s)	211, 260, 764, 990, 1877, 2005, 2216
AflIII	ACRYGT	1 cut(s)	573
AgeI	ACCGGT	1 cut(s)	297
AgsI	TTSAA	9 cut(s)	430, 593, 718, 780, 1216, 1234, 1958, 2471, 2522
AjnI	CCWGG	4 cut(s)	232, 313, 770, 960
AjuI	GAANNNNNNNTTGG	2 cut(s)	371, 403
AleI	CACNNNNGTG	1 cut(s)	2141
AluBI	AGCT	7 cut(s)	36, 117, 221, 822, 915, 1548, 1679
AluI	AGCT	7 cut(s)	36, 117, 221, 822, 915, 1548, 1679
Alw21I	GWGCWC	1 cut(s)	2042
Alw26I	GTCTC	6 cut(s)	387, 482, 742, 854, 1101, 1836
AlwI	GGATC	2 cut(s)	938, 2636
AlwNI	CAGNNNCTG	3 cut(s)	452, 476, 538
AoxI	GGCC	4 cut(s)	316, 1568, 2255, 2304
ApeKI	GCWGC	2 cut(s)	253, 629
ApoI	RAATTY	8 cut(s)	287, 503, 854, 1092, 1183, 1959, 2353, 2390
AsiGI	ACCGGT	1 cut(s)	297
Asp718I	GGTACC	1 cut(s)	2003
AspLEI	GCGC	3 cut(s)	1524, 1973, 1978
AspS9I	GGNCC	5 cut(s)	644, 1265, 1770, 2304, 2568
AsuC2I	CCSGG	3 cut(s)	734, 884, 2171
AsuHPI	GGTGA	7 cut(s)	46, 76, 732, 976, 1871, 2015, 2155
AsuII	TTCGAA	1 cut(s)	1187
AvaII	GGWCC	4 cut(s)	644, 1265, 1770, 2568
BaeGI	GKGCMC	3 cut(s)	1128, 2015, 2108
BaeI	ACNNNNGTAYC	2 cut(s)	1987, 2020
BalI	TGGCCA	1 cut(s)	318
BanI	GGYRCC	4 cut(s)	659, 672, 2003, 2012
BanII	GRGCYC	1 cut(s)	1224
BbrPI	CACGTG	1 cut(s)	1892
BbsI	GAAGAC	1 cut(s)	756
Bbv12I	GWGCWC	1 cut(s)	2042
BbvI	GCAGC	2 cut(s)	240, 641
BceAI	ACGGC	5 cut(s)	241, 287, 1267, 1384, 1760
BcgI	CGANNNNNNTGC	2 cut(s)	235, 269
BciT130I	CCWGG	4 cut(s)	234, 315, 772, 962
BciVI	GTATCC	1 cut(s)	563
BclI	TGATCA	1 cut(s)	2335
BcnI	CCSGG	3 cut(s)	734, 884, 2171
BcoDI	GTCTC	6 cut(s)	387, 482, 742, 854, 1101, 1836
BfaI	CTAG	2 cut(s)	1194, 1551
BfmI	CTRYAG	5 cut(s)	195, 444, 468, 627, 939
BfuI	GTATCC	1 cut(s)	563
BisI	GCNGC	6 cut(s)	133, 254, 630, 1641, 1974, 2373
BlsI	GCNGC	6 cut(s)	134, 255, 631, 1642, 1975, 2374
Bme1390I	CCNGG	7 cut(s)	234, 315, 734, 772, 884, 962, 2171
Bme18I	GGWCC	4 cut(s)	644, 1265, 1770, 2568
BmgT120I	GGNCC	5 cut(s)	644, 1265, 1770, 2304, 2568
BmiI	GGNNCC	8 cut(s)	661, 674, 1267, 1771, 1772, 2005, 2014, 2569
BmrFI	CCNGG	7 cut(s)	234, 315, 734, 772, 884, 962, 2171
BmrI	ACTGGG	2 cut(s)	1122, 2625
BmsI	GCATC	6 cut(s)	246, 439, 483, 816, 1788, 2369
BmuI	ACTGGG	2 cut(s)	1122, 2625
BpiI	GAAGAC	1 cut(s)	756
BplI	GAGNNNNNCTC	2 cut(s)	1787, 1819
BpmI	CTGGAG	3 cut(s)	719, 1528, 1713
Bpu10I	CCTNAGC	1 cut(s)	113
Bpu14I	TTCGAA	1 cut(s)	1187
BpuEI	CTTGAG	1 cut(s)	1520
BpuMI	CCSGG	3 cut(s)	734, 884, 2171
Bsa29I	ATCGAT	2 cut(s)	1713, 2640
BsaAI	YACGTR	1 cut(s)	1892
BsaBI	GATNNNNATC	3 cut(s)	1011, 2178, 2280
BsaHI	GRCGYC	1 cut(s)	2185
BsaI	GGTCTC	1 cut(s)	742
BsaJI	CCNNGG	8 cut(s)	232, 634, 771, 882, 1940, 2007, 2073, 2400
BsaWI	WCCGGW	3 cut(s)	68, 297, 2644
BsaXI	ACNNNNNCTCC	4 cut(s)	538, 568, 1002, 1032
Bse118I	RCCGGY	6 cut(s)	297, 401, 669, 755, 902, 1466
Bse1I	ACTGG	7 cut(s)	66, 1128, 1581, 1629, 1730, 2571, 2620
Bse3DI	GCAATG	1 cut(s)	2477
Bse8I	GATNNNNATC	3 cut(s)	1011, 2178, 2280
BseBI	CCWGG	4 cut(s)	234, 315, 772, 962
BseCI	ATCGAT	2 cut(s)	1713, 2640
BseDI	CCNNGG	8 cut(s)	232, 634, 771, 882, 1940, 2007, 2073, 2400
BseGI	GGATG	8 cut(s)	125, 212, 327, 1012, 1566, 2062, 2306, 2455
BseJI	GATNNNNATC	3 cut(s)	1011, 2178, 2280
BseMI	GCAATG	1 cut(s)	2477
BseMII	CTCAG	3 cut(s)	297, 2190, 2622
BseNI	ACTGG	7 cut(s)	66, 1128, 1581, 1629, 1730, 2571, 2620
BseRI	GAGGAG	3 cut(s)	9, 35, 232
BseSI	GKGCMC	3 cut(s)	1128, 2015, 2108
BseXI	GCAGC	2 cut(s)	240, 641
BseYI	CCCAGC	2 cut(s)	557, 1679
BsgI	GTGCAG	1 cut(s)	1491
Bsh1236I	CGCG	4 cut(s)	575, 1524, 1776, 1973
Bsh1285I	CGRYCG	1 cut(s)	373
BshFI	GGCC	4 cut(s)	318, 1570, 2257, 2306
BshNI	GGYRCC	4 cut(s)	659, 672, 2003, 2012
BshTI	ACCGGT	1 cut(s)	297
BshVI	ATCGAT	2 cut(s)	1713, 2640
BsiEI	CGRYCG	1 cut(s)	373
BsiHKAI	GWGCWC	1 cut(s)	2042
BslFI	GGGAC	3 cut(s)	1756, 1909, 2632
BsmAI	GTCTC	6 cut(s)	387, 482, 742, 854, 1101, 1836
BsmBI	CGTCTC	2 cut(s)	482, 854
BsmFI	GGGAC	3 cut(s)	1756, 1909, 2632
BsnI	GGCC	4 cut(s)	318, 1570, 2257, 2306
Bso31I	GGTCTC	1 cut(s)	742
Bsp119I	TTCGAA	1 cut(s)	1187
Bsp1286I	GDGCHC	5 cut(s)	1128, 1224, 2015, 2042, 2108
Bsp143I	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
Bsp19I	CCATGG	2 cut(s)	1940, 2400
BspANI	GGCC	4 cut(s)	318, 1570, 2257, 2306
BspCNI	CTCAG	3 cut(s)	296, 2191, 2623
BspDI	ATCGAT	2 cut(s)	1713, 2640
BspFNI	CGCG	4 cut(s)	575, 1524, 1776, 1973
BspLI	GGNNCC	8 cut(s)	661, 674, 1267, 1771, 1772, 2005, 2014, 2569
BspMAI	CTGCAG	3 cut(s)	448, 472, 631
BspPI	GGATC	2 cut(s)	938, 2636
BspT104I	TTCGAA	1 cut(s)	1187
BspT107I	GGYRCC	4 cut(s)	659, 672, 2003, 2012
BspTNI	GGTCTC	1 cut(s)	742
BsrBI	CCGCTC	2 cut(s)	375, 695
BsrDI	GCAATG	1 cut(s)	2477
BsrFI	RCCGGY	6 cut(s)	297, 401, 669, 755, 902, 1466
BsrI	ACTGG	7 cut(s)	66, 1128, 1581, 1629, 1730, 2571, 2620
BssAI	RCCGGY	6 cut(s)	297, 401, 669, 755, 902, 1466
BssECI	CCNNGG	8 cut(s)	232, 634, 771, 882, 1940, 2007, 2073, 2400
BssMI	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
BssNI	GRCGYC	1 cut(s)	2185
BssT1I	CCWWGG	5 cut(s)	634, 1940, 2007, 2073, 2400
Bst2UI	CCWGG	4 cut(s)	234, 315, 772, 962
Bst4CI	ACNGT	3 cut(s)	2027, 2272, 2363
Bst6I	CTCTTC	5 cut(s)	53, 392, 882, 1905, 1941
BstACI	GRCGYC	1 cut(s)	2185
BstAPI	GCANNNNNTGC	1 cut(s)	1984
BstBAI	YACGTR	1 cut(s)	1892
BstBI	TTCGAA	1 cut(s)	1187
BstC8I	GCNNGC	5 cut(s)	609, 1206, 1520, 1572, 2384
BstDEI	CTNAG	7 cut(s)	113, 283, 1498, 2121, 2199, 2293, 2631
BstDSI	CCRYGG	2 cut(s)	1940, 2400
BstEII	GGTNACC	1 cut(s)	64
BstF5I	GGATG	8 cut(s)	125, 212, 327, 1012, 1566, 2062, 2306, 2455
BstFNI	CGCG	4 cut(s)	575, 1524, 1776, 1973
BstHHI	GCGC	3 cut(s)	1524, 1973, 1978
BstKTI	GATC	8 cut(s)	946, 1015, 1635, 1869, 2338, 2553, 2637, 2644
BstMAI	GTCTC	6 cut(s)	387, 482, 742, 854, 1101, 1836
BstMBI	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
BstMCI	CGRYCG	1 cut(s)	373
BstNI	CCWGG	4 cut(s)	234, 315, 772, 962
BstNSI	RCATGY	2 cut(s)	763, 1208
BstPI	GGTNACC	1 cut(s)	64
BstSCI	CCNGG	7 cut(s)	232, 313, 732, 770, 882, 960, 2169
BstSFI	CTRYAG	5 cut(s)	195, 444, 468, 627, 939
BstSLI	GKGCMC	3 cut(s)	1128, 2015, 2108
BstUI	CGCG	4 cut(s)	575, 1524, 1776, 1973
BstV1I	GCAGC	2 cut(s)	240, 641
BstV2I	GAAGAC	1 cut(s)	756
BstX2I	RGATCY	1 cut(s)	943
BstXI	CCANNNNNNTGG	2 cut(s)	641, 1079
BstYI	RGATCY	1 cut(s)	943
Bsu15I	ATCGAT	2 cut(s)	1713, 2640
BsuI	GTATCC	1 cut(s)	563
BsuRI	GGCC	4 cut(s)	318, 1570, 2257, 2306
BsuTUI	ATCGAT	2 cut(s)	1713, 2640
BtgI	CCRYGG	2 cut(s)	1940, 2400
BtgZI	GCGATG	2 cut(s)	654, 2420
BtsCI	GGATG	8 cut(s)	125, 212, 327, 1012, 1566, 2062, 2306, 2455
BtsI	GCAGTG	4 cut(s)	441, 465, 624, 876
BtsIMutI	CAGTG	8 cut(s)	141, 441, 465, 624, 876, 1622, 1920, 2578
Cac8I	GCNNGC	5 cut(s)	609, 1206, 1520, 1572, 2384
CaiI	CAGNNNCTG	3 cut(s)	452, 476, 538
CfoI	GCGC	3 cut(s)	1524, 1973, 1978
Cfr10I	RCCGGY	6 cut(s)	297, 401, 669, 755, 902, 1466
Cfr13I	GGNCC	5 cut(s)	644, 1265, 1770, 2304, 2568
ClaI	ATCGAT	2 cut(s)	1713, 2640
CseI	GACGC	1 cut(s)	2536
CsiI	ACCWGGT	1 cut(s)	960
Csp6I	GTAC	7 cut(s)	210, 259, 763, 989, 1876, 2004, 2215
CspAI	ACCGGT	1 cut(s)	297
CspCI	CAANNNNNGTGG	4 cut(s)	385, 420, 706, 741
CviQI	GTAC	7 cut(s)	210, 259, 763, 989, 1876, 2004, 2215
DdeI	CTNAG	7 cut(s)	113, 283, 1498, 2121, 2199, 2293, 2631
DpnI	GATC	8 cut(s)	945, 1014, 1634, 1868, 2337, 2552, 2636, 2643
DpnII	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
DraI	TTTAAA	1 cut(s)	2358
DraIII	CACNNNGTG	1 cut(s)	679
DrdI	GACNNNNNNGTC	2 cut(s)	73, 1585
DseDI	GACNNNNNNGTC	2 cut(s)	73, 1585
EaeI	YGGCCR	1 cut(s)	316
Eam1104I	CTCTTC	5 cut(s)	53, 392, 882, 1905, 1941
EarI	CTCTTC	5 cut(s)	53, 392, 882, 1905, 1941
EciI	GGCGGA	1 cut(s)	1802
Eco130I	CCWWGG	5 cut(s)	634, 1940, 2007, 2073, 2400
Eco24I	GRGCYC	1 cut(s)	1224
Eco31I	GGTCTC	1 cut(s)	742
Eco32I	GATATC	3 cut(s)	175, 1162, 2162
Eco47I	GGWCC	4 cut(s)	644, 1265, 1770, 2568
Eco72I	CACGTG	1 cut(s)	1892
Eco91I	GGTNACC	1 cut(s)	64
EcoO109I	RGGNCCY	1 cut(s)	1770
EcoO65I	GGTNACC	1 cut(s)	64
EcoRI	GAATTC	3 cut(s)	287, 503, 1092
EcoRII	CCWGG	4 cut(s)	232, 313, 770, 960
EcoRV	GATATC	3 cut(s)	175, 1162, 2162
EcoT14I	CCWWGG	5 cut(s)	634, 1940, 2007, 2073, 2400
EcoT38I	GRGCYC	1 cut(s)	1224
ErhI	CCWWGG	5 cut(s)	634, 1940, 2007, 2073, 2400
Esp3I	CGTCTC	2 cut(s)	482, 854
FalI	AAGNNNNNCTT	2 cut(s)	371, 403
FaqI	GGGAC	3 cut(s)	1756, 1909, 2632
FauI	CCCGC	1 cut(s)	1781
FbaI	TGATCA	1 cut(s)	2335
FblI	GTMKAC	1 cut(s)	1698
Fnu4HI	GCNGC	6 cut(s)	133, 254, 630, 1641, 1974, 2373
FokI	GGATG	8 cut(s)	112, 199, 314, 1019, 1573, 2069, 2313, 2462
FriOI	GRGCYC	1 cut(s)	1224
Fsp4HI	GCNGC	6 cut(s)	133, 254, 630, 1641, 1974, 2373
FspBI	CTAG	2 cut(s)	1194, 1551
GlaI	GCGC	3 cut(s)	1523, 1972, 1977
GluI	GCNGC	6 cut(s)	133, 254, 630, 1641, 1974, 2373
GsaI	CCCAGC	2 cut(s)	561, 1683
GsuI	CTGGAG	3 cut(s)	719, 1528, 1713
HaeIII	GGCC	4 cut(s)	318, 1570, 2257, 2306
HgaI	GACGC	1 cut(s)	2536
HhaI	GCGC	3 cut(s)	1524, 1973, 1978
Hin1I	GRCGYC	1 cut(s)	2185
Hin6I	GCGC	3 cut(s)	1522, 1971, 1976
HinP1I	GCGC	3 cut(s)	1522, 1971, 1976
HincII	GTYRAC	2 cut(s)	2189, 2613
HindII	GTYRAC	2 cut(s)	2189, 2613
HindIII	AAGCTT	1 cut(s)	219
HphI	GGTGA	7 cut(s)	46, 76, 732, 976, 1871, 2015, 2155
Hpy166II	GTNNAC	8 cut(s)	78, 895, 1699, 1876, 2189, 2215, 2576, 2613
Hpy188I	TCNGA	6 cut(s)	286, 1026, 1841, 2083, 2209, 2632
Hpy8I	GTNNAC	8 cut(s)	78, 895, 1699, 1876, 2189, 2215, 2576, 2613
Hpy99I	CGWCG	2 cut(s)	725, 2187
HpyAV	CCTTC	8 cut(s)	425, 1608, 2134, 2140, 2230, 2247, 2451, 2558
HpyCH4III	ACNGT	3 cut(s)	2027, 2272, 2363
HpyCH4IV	ACGT	6 cut(s)	543, 720, 1695, 1891, 2185, 2517
HpyF3I	CTNAG	7 cut(s)	113, 283, 1498, 2121, 2199, 2293, 2631
HpySE526I	ACGT	6 cut(s)	543, 720, 1695, 1891, 2185, 2517
Hsp92I	GRCGYC	1 cut(s)	2185
HspAI	GCGC	3 cut(s)	1522, 1971, 1976
KflI	GGGWCCC	1 cut(s)	1770
KpnI	GGTACC	1 cut(s)	2007
Ksp22I	TGATCA	1 cut(s)	2335
Kzo9I	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
LmnI	GCTCC	4 cut(s)	22, 380, 1051, 1676
Lsp1109I	GCAGC	2 cut(s)	240, 641
LweI	GCATC	6 cut(s)	246, 439, 483, 816, 1788, 2369
MabI	ACCWGGT	1 cut(s)	960
MaeI	CTAG	2 cut(s)	1194, 1551
MaeII	ACGT	6 cut(s)	543, 720, 1695, 1891, 2185, 2517
MaeIII	GTNAC	9 cut(s)	52, 64, 439, 544, 1587, 1613, 1904, 2027, 2395
MalI	GATC	8 cut(s)	945, 1014, 1634, 1868, 2337, 2552, 2636, 2643
MbiI	CCGCTC	2 cut(s)	375, 695
MboI	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
MflI	RGATCY	1 cut(s)	943
MhlI	GDGCHC	5 cut(s)	1128, 1224, 2015, 2042, 2108
MlsI	TGGCCA	1 cut(s)	318
MluI	ACGCGT	1 cut(s)	573
MluNI	TGGCCA	1 cut(s)	318
MlyI	GAGTC	6 cut(s)	83, 359, 1535, 1803, 1891, 2439
MmeI	TCCRAC	2 cut(s)	119, 2278
Mox20I	TGGCCA	1 cut(s)	318
MscI	TGGCCA	1 cut(s)	318
MseI	TTAA	4 cut(s)	513, 954, 2195, 2357
MslI	CAYNNNNRTG	5 cut(s)	758, 978, 2141, 2322, 2405
Msp20I	TGGCCA	1 cut(s)	318
MspA1I	CMGCKG	1 cut(s)	1049
MspR9I	CCNGG	7 cut(s)	234, 315, 734, 772, 884, 962, 2171
MteI	GCGCNGCGC	1 cut(s)	1974
MvaI	CCWGG	4 cut(s)	234, 315, 772, 962
MvnI	CGCG	4 cut(s)	575, 1524, 1776, 1973
NciI	CCSGG	3 cut(s)	734, 884, 2171
NcoI	CCATGG	2 cut(s)	1940, 2400
NdeII	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
NlaIV	GGNNCC	8 cut(s)	661, 674, 1267, 1771, 1772, 2005, 2014, 2569
NmuCI	GTSAC	7 cut(s)	52, 64, 439, 544, 1587, 1904, 2027
NspI	RCATGY	2 cut(s)	763, 1208
NspV	TTCGAA	1 cut(s)	1187
OliI	CACNNNNGTG	1 cut(s)	2141
PaeI	GCATGC	1 cut(s)	1208
PcsI	WCGNNNNNNNCGW	1 cut(s)	366
PfeI	GAWTC	7 cut(s)	152, 184, 714, 776, 864, 1707, 2597
PflFI	GACNNNGTC	1 cut(s)	2116
PinAI	ACCGGT	1 cut(s)	297
PkrI	GCNGC	6 cut(s)	134, 255, 631, 1642, 1975, 2374
PleI	GAGTC	6 cut(s)	82, 358, 1535, 1803, 1891, 2438
PmaCI	CACGTG	1 cut(s)	1892
PmlI	CACGTG	1 cut(s)	1892
PpsI	GAGTC	6 cut(s)	82, 358, 1535, 1803, 1891, 2438
Ppu21I	YACGTR	1 cut(s)	1892
PpuMI	RGGWCCY	1 cut(s)	1770
PsiI	TTATAA	1 cut(s)	1034
Psp5II	RGGWCCY	1 cut(s)	1770
Psp6I	CCWGG	4 cut(s)	232, 313, 770, 960
PspCI	CACGTG	1 cut(s)	1892
PspEI	GGTNACC	1 cut(s)	64
PspFI	CCCAGC	2 cut(s)	557, 1679
PspGI	CCWGG	4 cut(s)	232, 313, 770, 960
PspN4I	GGNNCC	8 cut(s)	661, 674, 1267, 1771, 1772, 2005, 2014, 2569
PspPI	GGNCC	5 cut(s)	644, 1265, 1770, 2304, 2568
PspPPI	RGGWCCY	1 cut(s)	1770
PstI	CTGCAG	3 cut(s)	448, 472, 631
PstNI	CAGNNNCTG	3 cut(s)	452, 476, 538
PsuI	RGATCY	1 cut(s)	943
PsyI	GACNNNGTC	1 cut(s)	2116
RsaI	GTAC	7 cut(s)	211, 260, 764, 990, 1877, 2005, 2216
RsaNI	GTAC	7 cut(s)	210, 259, 763, 989, 1876, 2004, 2215
RseI	CAYNNNNRTG	5 cut(s)	758, 978, 2141, 2322, 2405
SaqAI	TTAA	4 cut(s)	513, 954, 2195, 2357
SatI	GCNGC	6 cut(s)	133, 254, 630, 1641, 1974, 2373
Sau3AI	GATC	8 cut(s)	943, 1012, 1632, 1866, 2335, 2550, 2634, 2641
Sau96I	GGNCC	5 cut(s)	644, 1265, 1770, 2304, 2568
SchI	GAGTC	6 cut(s)	83, 359, 1535, 1803, 1891, 2439
ScrFI	CCNGG	7 cut(s)	234, 315, 734, 772, 884, 962, 2171
SduI	GDGCHC	5 cut(s)	1128, 1224, 2015, 2042, 2108
SexAI	ACCWGGT	1 cut(s)	960
SfaNI	GCATC	6 cut(s)	246, 439, 483, 816, 1788, 2369
SfcI	CTRYAG	5 cut(s)	195, 444, 468, 627, 939
SfuI	TTCGAA	1 cut(s)	1187
SinI	GGWCC	4 cut(s)	644, 1265, 1770, 2568
SmiMI	CAYNNNNRTG	5 cut(s)	758, 978, 2141, 2322, 2405
SmlI	CTYRAG	1 cut(s)	1535
SmoI	CTYRAG	1 cut(s)	1535
SphI	GCATGC	1 cut(s)	1208
SspMI	CTAG	2 cut(s)	1194, 1551
StyD4I	CCNGG	7 cut(s)	232, 313, 732, 770, 882, 960, 2169
StyI	CCWWGG	5 cut(s)	634, 1940, 2007, 2073, 2400
TaaI	ACNGT	3 cut(s)	2027, 2272, 2363
TaiI	ACGT	6 cut(s)	546, 723, 1698, 1894, 2188, 2520
TaqII	GACCGA	1 cut(s)	1468
TatI	WGTACW	2 cut(s)	209, 2214
TauI	GCSGC	4 cut(s)	135, 1643, 1976, 2375
TfiI	GAWTC	7 cut(s)	152, 184, 714, 776, 864, 1707, 2597
Tru1I	TTAA	4 cut(s)	513, 954, 2195, 2357
Tru9I	TTAA	4 cut(s)	513, 954, 2195, 2357
TscAI	CASTG	8 cut(s)	148, 448, 472, 631, 883, 1629, 1927, 2578
TseFI	GTSAC	7 cut(s)	52, 64, 439, 544, 1587, 1904, 2027
TseI	GCWGC	2 cut(s)	253, 629
Tsp45I	GTSAC	7 cut(s)	52, 64, 439, 544, 1587, 1904, 2027
TspDTI	ATGAA	9 cut(s)	17, 316, 762, 962, 1657, 1699, 2423, 2547, 2577
TspGWI	ACGGA	5 cut(s)	797, 1436, 1802, 2442, 2590
TspRI	CASTG	8 cut(s)	148, 448, 472, 631, 883, 1629, 1927, 2578
Tth111I	GACNNNGTC	1 cut(s)	2116
VpaK11BI	GGWCC	4 cut(s)	644, 1265, 1770, 2568
XapI	RAATTY	8 cut(s)	287, 503, 854, 1092, 1183, 1959, 2353, 2390
XbaI	TCTAGA	1 cut(s)	1193
XceI	RCATGY	2 cut(s)	763, 1208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1938
XmiI	GTMKAC	1 cut(s)	1698
XspI	CTAG	2 cut(s)	1194, 1551
ZraI	GACGTC	1 cut(s)	2186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.