Rroxscaffold_4G00326080

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
58089634 .. 58091309
1676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00326080.1

Sequence Viewer

Length: 1659 bp
ATGGGGTACAACCAAACCATCAACAAGAGCTACAATCTAACTTGGGGATTTCCTGTAGATCCACAATTTAATTACCTGGTGAGGCTTCATTTTTGTGAGATTGTACCAAATTATACGATGGATGGAGATCGTGTGTTTCAGATTTTTATAAATAACCAAACAGCGGAGCAGAAAGCGGACATAATCCAATGGAGTGGAGGAAATGGGATTCCCGTATATAGAGACTACCTTCTGTTCGTGCCCAGTCGTCCAAACAAGAAGAAAGGTAAAGTTGATATCATTGTTGCACTACAAGCAAATTCGGAATCTCGATATAAGGAGGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAACGGCAATCTCGCCGGACCCAATCCCGACCCACCACCTCCACAGCCACCACCGCCGTTCTCAATCCCGACACAAACGGAACAACCAAATGTGAAACCGCTTCCTATGCTTCCTACCCTTGCCGGTGCAGTTTCGGTCTTACTTGTTCTTTCCCTAGTGGTGTTTTTACATTGCAGGCGTGGAATAGAACTCAAGGACTCCAGCTCCAGCCACAGGATGACGAGGCCAGCCATGACCAGTAGGTCACATTTACCCTCTTATTTGTGTCGTTACTTTTCACTGGCAGAGGTCAAAGCCGCCACCAAATACTTCGATGATACTTTCATTATTGGAGCTGGGGGATTTGGCAACGTATACAAAGGATTCATCGATGGTGGAGGCACTCCAGTTGCAATCAAACGGCGGAAAGCCATGTCATCACAAGGGTCCCGTGAGTTTAGGACGGAAATTGAGATGCTCTCTCGACTCCGCCACCGCCATTTGGTGTCTCTTATCGGATTTTGTGCCGATGAAGGTGAGATGATCTTGGTGTACGATTACATGGCACGTGGGACTCTTCGTGACCATCTCTACCACACTGATAATCCACCTCTTCCATGGGAACAACGGCTTCAAATTTGTATTGGCGCGGCGCAAGGTTTGCACTATCTTCACACAGGTACCAAGGGCACCATCATTCACCGTGACATAAAGAGCACAAACATATTATTGGATGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCGAGAAAGGGCACAATCACCGTGTCTAAGACCCACATTAGCACGAAGGTGAAGGGTAGTTTTGGATATCTTGACCGGATTACTATCGACAAGTCTGATGTGTACTCCTTCGGTGTAGTGTTGTGCGAGGTATTGTGTGGAAGGCCAGCTATAACAACCGTAGATAATAATCGAGTTGGCTTAGCTGGATGGGCCAAGAAGTGTCATCGTAATGGGAAACTTGATCAAATTATTGACCCAAATTTAAACGGTAAGATTGCGGCACGATGCTTGCACAAATTTGTTACCATGGCGATGAATTGCATAGATGATAATGGAGTAAATCGACCTTCGATGGATGATGTTGTGAGAGGGCTTCAATTTGCATTGCAGTTGCAACAGTACAAAGAGGATTATATTGATTTCGTTGAAAGGACACATGAAGATAAGATTGTTTCGATCAAGGACAATGAAGGGTCCAGTGAACAAGATTGTGGGGCGAACGAATCCGTGCAAGGGTTGACTGGGGCGATCTTCTCTGAGATCATCGATCCGGTTGGTAGATAA

Protein Analysis

552

Amino Acids

61.64

Weight (kDa)

8.6

Isoelectric Point (pI)

35.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 8 - 117 3.2e-12 Malectin-like domain
Malectin PF11721 12 - 77 7.6e-09 Malectin domain
Pkinase PF00069 230 - 487 3.3e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 231 - 488 1e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 149
AasI GACNNNNNNGTC 1 cut(s) 604
Acc65I GGTACC 1 cut(s) 1022
AccB1I GGYRCC 2 cut(s) 1022, 1031
AccI GTMKAC 1 cut(s) 717
AccII CGCG 1 cut(s) 992
AclWI GGATC 2 cut(s) 53, 1637
AcsI RAATTY 4 cut(s) 298, 978, 1354, 1391
AcvI CACGTG 1 cut(s) 911
AfaI GTAC 6 cut(s) 8, 105, 896, 1024, 1217, 1496
AfiI CCNNNNNNNGG 4 cut(s) 163, 576, 844, 1608
AgsI TTSAA 5 cut(s) 331, 349, 977, 1472, 1523
AjnI CCWGG 1 cut(s) 75
AleI CACNNNNGTG 1 cut(s) 1160
AluBI AGCT 5 cut(s) 30, 567, 698, 1262, 1298
AluI AGCT 5 cut(s) 30, 567, 698, 1262, 1298
Alw21I GWGCWC 1 cut(s) 1061
Alw26I GTCTC 2 cut(s) 216, 855
AlwI GGATC 2 cut(s) 53, 1637
AoxI GGCC 3 cut(s) 587, 1256, 1305
ApoI RAATTY 4 cut(s) 298, 978, 1354, 1391
Asp718I GGTACC 1 cut(s) 1022
AspLEI GCGC 2 cut(s) 992, 997
AspS9I GGNCC 4 cut(s) 380, 789, 1305, 1569
AsuHPI GGTGA 5 cut(s) 91, 890, 1034, 1123, 1174
AvaII GGWCC 3 cut(s) 380, 789, 1569
BaeGI GKGCMC 3 cut(s) 243, 1034, 1127
BaeI ACNNNNGTAYC 2 cut(s) 1006, 1039
BanI GGYRCC 2 cut(s) 1022, 1031
BanII GRGCYC 1 cut(s) 339
BbrPI CACGTG 1 cut(s) 911
Bbv12I GWGCWC 1 cut(s) 1061
BccI CCATC 8 cut(s) 26, 112, 116, 728, 936, 1043, 1296, 1441
BceAI ACGGC 4 cut(s) 382, 403, 779, 986
BciT130I CCWGG 1 cut(s) 77
BclI TGATCA 1 cut(s) 1336
BcoDI GTCTC 2 cut(s) 216, 855
BfaI CTAG 1 cut(s) 518
BfmI CTRYAG 1 cut(s) 54
BisI GCNGC 3 cut(s) 660, 993, 1374
BlpI GCTNAGC 1 cut(s) 1294
BlsI GCNGC 3 cut(s) 661, 994, 1375
Bme1390I CCNGG 1 cut(s) 77
Bme18I GGWCC 3 cut(s) 380, 789, 1569
BmgT120I GGNCC 4 cut(s) 380, 789, 1305, 1569
BmiI GGNNCC 6 cut(s) 382, 790, 791, 1024, 1033, 1570
BmrFI CCNGG 1 cut(s) 77
BmrI ACTGGG 2 cut(s) 237, 1626
BmsI GCATC 2 cut(s) 807, 1370
BmuI ACTGGG 2 cut(s) 237, 1626
BplI GAGNNNNNCTC 2 cut(s) 806, 838
BpmI CTGGAG 3 cut(s) 547, 553, 732
Bpu1102I GCTNAGC 1 cut(s) 1294
BpuEI CTTGAG 1 cut(s) 539
Bsa29I ATCGAT 2 cut(s) 732, 1641
BsaAI YACGTR 1 cut(s) 911
BsaBI GATNNNNATC 3 cut(s) 126, 1196, 1281
BsaJI CCNNGG 4 cut(s) 959, 1026, 1092, 1401
BsaWI WCCGGW 2 cut(s) 1188, 1645
BsaXI ACNNNNNCTCC 4 cut(s) 117, 147, 551, 581
Bsc4I CCNNNNNNNGG 4 cut(s) 163, 576, 844, 1608
Bse118I RCCGGY 1 cut(s) 485
Bse1I ACTGG 6 cut(s) 243, 600, 648, 749, 1572, 1621
Bse3DI GCAATG 2 cut(s) 532, 1478
Bse8I GATNNNNATC 3 cut(s) 126, 1196, 1281
BseBI CCWGG 1 cut(s) 77
BseCI ATCGAT 2 cut(s) 732, 1641
BseDI CCNNGG 4 cut(s) 959, 1026, 1092, 1401
BseGI GGATG 5 cut(s) 127, 585, 1081, 1307, 1456
BseJI GATNNNNATC 3 cut(s) 126, 1196, 1281
BseLI CCNNNNNNNGG 4 cut(s) 163, 576, 844, 1608
BseMI GCAATG 2 cut(s) 532, 1478
BseMII CTCAG 1 cut(s) 1623
BseNI ACTGG 6 cut(s) 243, 600, 648, 749, 1572, 1621
BseSI GKGCMC 3 cut(s) 243, 1034, 1127
BseYI CCCAGC 1 cut(s) 698
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 1 cut(s) 992
BshFI GGCC 3 cut(s) 589, 1258, 1307
BshNI GGYRCC 2 cut(s) 1022, 1031
BshVI ATCGAT 2 cut(s) 732, 1641
BsiHKAI GWGCWC 1 cut(s) 1061
BsiSI CCGG 4 cut(s) 378, 486, 1189, 1646
BslFI GGGAC 2 cut(s) 775, 928
BslI CCNNNNNNNGG 4 cut(s) 163, 576, 844, 1608
BsmAI GTCTC 2 cut(s) 216, 855
BsmFI GGGAC 2 cut(s) 775, 928
BsnI GGCC 3 cut(s) 589, 1258, 1307
Bsp1286I GDGCHC 5 cut(s) 243, 339, 1034, 1061, 1127
Bsp143I GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
Bsp1720I GCTNAGC 1 cut(s) 1294
Bsp19I CCATGG 2 cut(s) 959, 1401
BspANI GGCC 3 cut(s) 589, 1258, 1307
BspCNI CTCAG 1 cut(s) 1624
BspDI ATCGAT 2 cut(s) 732, 1641
BspFNI CGCG 1 cut(s) 992
BspLI GGNNCC 6 cut(s) 382, 790, 791, 1024, 1033, 1570
BspPI GGATC 2 cut(s) 53, 1637
BspT107I GGYRCC 2 cut(s) 1022, 1031
BsrDI GCAATG 2 cut(s) 532, 1478
BsrFI RCCGGY 1 cut(s) 485
BsrI ACTGG 6 cut(s) 243, 600, 648, 749, 1572, 1621
BssAI RCCGGY 1 cut(s) 485
BssECI CCNNGG 4 cut(s) 959, 1026, 1092, 1401
BssMI GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
BssNAI GTATAC 1 cut(s) 718
BssT1I CCWWGG 4 cut(s) 959, 1026, 1092, 1401
Bst1107I GTATAC 1 cut(s) 718
Bst2UI CCWGG 1 cut(s) 77
Bst4CI ACNGT 5 cut(s) 1046, 1135, 1273, 1364, 1494
Bst6I CTCTTC 2 cut(s) 924, 960
BstAPI GCANNNNNTGC 1 cut(s) 1003
BstBAI YACGTR 1 cut(s) 911
BstC8I GCNNGC 4 cut(s) 539, 591, 1260, 1385
BstDEI CTNAG 3 cut(s) 1140, 1294, 1632
BstDSI CCRYGG 2 cut(s) 959, 1401
BstF5I GGATG 5 cut(s) 127, 585, 1081, 1307, 1456
BstFNI CGCG 1 cut(s) 992
BstHHI GCGC 2 cut(s) 992, 997
BstKTI GATC 8 cut(s) 61, 130, 888, 1339, 1554, 1626, 1638, 1645
BstMAI GTCTC 2 cut(s) 216, 855
BstMBI GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
BstMWI GCNNNNNNNGC 5 cut(s) 293, 415, 469, 1003, 1304
BstNI CCWGG 1 cut(s) 77
BstSCI CCNGG 1 cut(s) 75
BstSFI CTRYAG 1 cut(s) 54
BstSLI GKGCMC 3 cut(s) 243, 1034, 1127
BstUI CGCG 1 cut(s) 992
BstX2I RGATCY 1 cut(s) 58
BstXI CCANNNNNNTGG 1 cut(s) 194
BstYI RGATCY 1 cut(s) 58
BstZ17I GTATAC 1 cut(s) 718
Bsu15I ATCGAT 2 cut(s) 732, 1641
BsuRI GGCC 3 cut(s) 589, 1258, 1307
BsuTUI ATCGAT 2 cut(s) 732, 1641
BtgI CCRYGG 2 cut(s) 959, 1401
BtgZI GCGATG 1 cut(s) 1421
BtsCI GGATG 5 cut(s) 127, 585, 1081, 1307, 1456
BtsIMutI CAGTG 3 cut(s) 641, 939, 1579
Cac8I GCNNGC 4 cut(s) 539, 591, 1260, 1385
CfoI GCGC 2 cut(s) 992, 997
Cfr10I RCCGGY 1 cut(s) 485
Cfr13I GGNCC 4 cut(s) 380, 789, 1305, 1569
ClaI ATCGAT 2 cut(s) 732, 1641
CsiI ACCWGGT 1 cut(s) 75
Csp6I GTAC 6 cut(s) 7, 104, 895, 1023, 1216, 1495
CviAII CATG 6 cut(s) 595, 775, 904, 960, 1402, 1532
CviQI GTAC 6 cut(s) 7, 104, 895, 1023, 1216, 1495
DdeI CTNAG 3 cut(s) 1140, 1294, 1632
DpnI GATC 8 cut(s) 60, 129, 887, 1338, 1553, 1625, 1637, 1644
DpnII GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
DraI TTTAAA 1 cut(s) 1359
DrdI GACNNNNNNGTC 1 cut(s) 604
DseDI GACNNNNNNGTC 1 cut(s) 604
Eam1104I CTCTTC 2 cut(s) 924, 960
EarI CTCTTC 2 cut(s) 924, 960
EciI GGCGGA 2 cut(s) 781, 821
Eco130I CCWWGG 4 cut(s) 959, 1026, 1092, 1401
Eco24I GRGCYC 1 cut(s) 339
Eco32I GATATC 2 cut(s) 277, 1181
Eco47I GGWCC 3 cut(s) 380, 789, 1569
Eco72I CACGTG 1 cut(s) 911
EcoO109I RGGNCCY 1 cut(s) 789
EcoRII CCWGG 1 cut(s) 75
EcoRV GATATC 2 cut(s) 277, 1181
EcoT14I CCWWGG 4 cut(s) 959, 1026, 1092, 1401
EcoT38I GRGCYC 1 cut(s) 339
ErhI CCWWGG 4 cut(s) 959, 1026, 1092, 1401
FaeI CATG 6 cut(s) 598, 778, 907, 963, 1405, 1535
FaqI GGGAC 2 cut(s) 775, 928
FatI CATG 6 cut(s) 594, 774, 903, 959, 1401, 1531
FbaI TGATCA 1 cut(s) 1336
FblI GTMKAC 1 cut(s) 717
Fnu4HI GCNGC 3 cut(s) 660, 993, 1374
FokI GGATG 5 cut(s) 134, 592, 1088, 1314, 1463
FriOI GRGCYC 1 cut(s) 339
Fsp4HI GCNGC 3 cut(s) 660, 993, 1374
FspBI CTAG 1 cut(s) 518
GlaI GCGC 2 cut(s) 991, 996
GluI GCNGC 3 cut(s) 660, 993, 1374
GsaI CCCAGC 1 cut(s) 702
GsuI CTGGAG 3 cut(s) 547, 553, 732
HaeIII GGCC 3 cut(s) 589, 1258, 1307
HapII CCGG 4 cut(s) 378, 486, 1189, 1646
HhaI GCGC 2 cut(s) 992, 997
Hin1II CATG 6 cut(s) 598, 778, 907, 963, 1405, 1535
Hin6I GCGC 2 cut(s) 990, 995
HinP1I GCGC 2 cut(s) 990, 995
HincII GTYRAC 1 cut(s) 1614
HindII GTYRAC 1 cut(s) 1614
HinfI GANTC 7 cut(s) 208, 305, 560, 726, 828, 916, 1598
HpaII CCGG 4 cut(s) 378, 486, 1189, 1646
HphI GGTGA 5 cut(s) 91, 890, 1034, 1123, 1174
Hpy166II GTNNAC 5 cut(s) 718, 895, 1216, 1577, 1614
Hpy188I TCNGA 6 cut(s) 141, 304, 860, 1102, 1210, 1633
Hpy188III TCNNGA 8 cut(s) 309, 328, 389, 430, 825, 923, 1116, 1184
Hpy8I GTNNAC 5 cut(s) 718, 895, 1216, 1577, 1614
HpyAV CCTTC 8 cut(s) 239, 869, 1153, 1159, 1231, 1248, 1452, 1559
HpyCH4III ACNGT 5 cut(s) 1046, 1135, 1273, 1364, 1494
HpyCH4IV ACGT 2 cut(s) 714, 910
HpyF10VI GCNNNNNNNGC 5 cut(s) 293, 415, 469, 1003, 1304
HpyF3I CTNAG 3 cut(s) 1140, 1294, 1632
HpySE526I ACGT 2 cut(s) 714, 910
Hsp92II CATG 6 cut(s) 598, 778, 907, 963, 1405, 1535
HspAI GCGC 2 cut(s) 990, 995
KflI GGGWCCC 1 cut(s) 789
KpnI GGTACC 1 cut(s) 1026
Ksp22I TGATCA 1 cut(s) 1336
Kzo9I GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
LmnI GCTCC 3 cut(s) 166, 572, 695
LweI GCATC 2 cut(s) 807, 1370
MabI ACCWGGT 1 cut(s) 75
MaeI CTAG 1 cut(s) 518
MaeII ACGT 2 cut(s) 714, 910
MaeIII GTNAC 5 cut(s) 606, 632, 923, 1046, 1396
MalI GATC 8 cut(s) 60, 129, 887, 1338, 1553, 1625, 1637, 1644
MboI GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
MboII GAAGA 7 cut(s) 271, 337, 911, 947, 1004, 1547, 1618
MflI RGATCY 1 cut(s) 58
MhlI GDGCHC 5 cut(s) 243, 339, 1034, 1061, 1127
MlyI GAGTC 3 cut(s) 554, 822, 910
MseI TTAA 2 cut(s) 69, 1358
MslI CAYNNNNRTG 4 cut(s) 93, 1160, 1323, 1406
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 4 cut(s) 378, 486, 1189, 1646
MspR9I CCNGG 1 cut(s) 77
MteI GCGCNGCGC 1 cut(s) 993
MvaI CCWGG 1 cut(s) 77
MvnI CGCG 1 cut(s) 992
MwoI GCNNNNNNNGC 5 cut(s) 293, 415, 469, 1003, 1304
NcoI CCATGG 2 cut(s) 959, 1401
NdeII GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
NlaIII CATG 6 cut(s) 598, 778, 907, 963, 1405, 1535
NlaIV GGNNCC 6 cut(s) 382, 790, 791, 1024, 1033, 1570
NmuCI GTSAC 3 cut(s) 606, 923, 1046
OliI CACNNNNGTG 1 cut(s) 1160
PfeI GAWTC 4 cut(s) 208, 305, 726, 1598
PkrI GCNGC 3 cut(s) 661, 994, 1375
PleI GAGTC 3 cut(s) 554, 822, 910
PmaCI CACGTG 1 cut(s) 911
PmlI CACGTG 1 cut(s) 911
PpsI GAGTC 3 cut(s) 554, 822, 910
Ppu21I YACGTR 1 cut(s) 911
PpuMI RGGWCCY 1 cut(s) 789
PsiI TTATAA 1 cut(s) 149
Psp5II RGGWCCY 1 cut(s) 789
Psp6I CCWGG 1 cut(s) 75
PspCI CACGTG 1 cut(s) 911
PspFI CCCAGC 1 cut(s) 698
PspGI CCWGG 1 cut(s) 75
PspN4I GGNNCC 6 cut(s) 382, 790, 791, 1024, 1033, 1570
PspPI GGNCC 4 cut(s) 380, 789, 1305, 1569
PspPPI RGGWCCY 1 cut(s) 789
PsuI RGATCY 1 cut(s) 58
RsaI GTAC 6 cut(s) 8, 105, 896, 1024, 1217, 1496
RsaNI GTAC 6 cut(s) 7, 104, 895, 1023, 1216, 1495
RseI CAYNNNNRTG 4 cut(s) 93, 1160, 1323, 1406
SaqAI TTAA 2 cut(s) 69, 1358
SatI GCNGC 3 cut(s) 660, 993, 1374
Sau3AI GATC 8 cut(s) 58, 127, 885, 1336, 1551, 1623, 1635, 1642
Sau96I GGNCC 4 cut(s) 380, 789, 1305, 1569
SchI GAGTC 3 cut(s) 554, 822, 910
ScrFI CCNGG 1 cut(s) 77
SduI GDGCHC 5 cut(s) 243, 339, 1034, 1061, 1127
SexAI ACCWGGT 1 cut(s) 75
SfaNI GCATC 2 cut(s) 807, 1370
SfcI CTRYAG 1 cut(s) 54
SinI GGWCC 3 cut(s) 380, 789, 1569
SmiMI CAYNNNNRTG 4 cut(s) 93, 1160, 1323, 1406
SmlI CTYRAG 1 cut(s) 554
SmoI CTYRAG 1 cut(s) 554
SspMI CTAG 1 cut(s) 518
StyD4I CCNGG 1 cut(s) 75
StyI CCWWGG 4 cut(s) 959, 1026, 1092, 1401
TaaI ACNGT 5 cut(s) 1046, 1135, 1273, 1364, 1494
TaiI ACGT 2 cut(s) 717, 913
TaqII GACCGA 1 cut(s) 487
TatI WGTACW 2 cut(s) 1215, 1494
TauI GCSGC 3 cut(s) 662, 995, 1376
TfiI GAWTC 4 cut(s) 208, 305, 726, 1598
Tru1I TTAA 2 cut(s) 69, 1358
Tru9I TTAA 2 cut(s) 69, 1358
TscAI CASTG 3 cut(s) 648, 946, 1579
TseFI GTSAC 3 cut(s) 606, 923, 1046
Tsp45I GTSAC 3 cut(s) 606, 923, 1046
TspDTI ATGAA 7 cut(s) 77, 676, 718, 888, 1424, 1548, 1578
TspGWI ACGGA 3 cut(s) 455, 821, 1591
TspRI CASTG 3 cut(s) 648, 946, 1579
VpaK11BI GGWCC 3 cut(s) 380, 789, 1569
XapI RAATTY 4 cut(s) 298, 978, 1354, 1391
XcmI CCANNNNNNNNNTGG 1 cut(s) 957
XmiI GTMKAC 1 cut(s) 717
XspI CTAG 1 cut(s) 518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.