Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

14643802 .. 14646911

Gene Structure 3110 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00294610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2646 bp

ATGAAACCAATCATCACTCCTTTCTACCTCTACTTGTTCCTCCACATCCTCACTCTCTTCGTCACCGGTCAGTCGCCACCATACATTCCGGTTGACGATATCACCCTCGCCTGCGGCAATTCCGGCCAATCGAGCTCCAATAGCCTCAGAAAGTGGAGTGGAGATATGGACTCAAAATTCACCCCAATAGGTACCGCATCCCAGTCCATCGCTGCACCGCGATCGTCCACCGCTAGCCAAGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCAAATTCACTTACACAATTCCCCTCTCTCCCGGCCAAAAATTCATCCGCTTGCATTTCAATCCAGATACATACAACCCGGACTTCCAACGCTCCAATTCCCTCTTCTCCGTCACCGCCGCCGGCTTCATTCTCCTCAAAAACTTCAACGCCTCCGGCACCGCCGACGCTTCCCGCAGGTCCCCGCTGGTCAGAGAATTCTGTGTAGACATCAAGACAGGACAGAGACTGGAGATCACCTTCAAACCAAACAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCCATGCCCACCGGTCTTTACTATACTTCTTCAGCTAAATTGGTCGGCACTAGCGCAAGCACATATCCGATCGAAATCAACACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGCGGAGGCCCCATCTCGCCTAAAGCAGACACCGGAATGTACCGGAATTGGGACACCGCCGACGAAATTTATTTGGATGATTTAAGTAAAAAATTCAGCGTGCTACCACAGAACAATACAATCGAGCTCAATTTCGTCAAAGTTCCAGAATACTCTGCCCCAAAACCAGTTTACACAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTTACATGGGTATTTCCCTTAGATCCCAAGTTTTATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGATATTACCAAGTACAGAGATAGAGCGTTTCAAATCTTCATGGCCAATCAAACCACAGAAAATATTTTTGATGTTATCGTAGAGAGCGGAGCAAATGGGAATCCAGTTTACACAGACTACGTTGTGGACATGTTCATGTCTCCGGTTGGAAGCGAGAAGAAAGTTAACCTCTCTCTAGTACTCTCAGCGCTCAAGAGAGATTCGTATACTACTTACAACGATGCCATCTTGAACGGGCTAGAAATCTTCAAGCTCAGCGACCCAAGTGGGAATCTTGCCGGACCCAACCCCGACCCGCCCCTGGTACAACCGAAGAGCCCAAGTAAGAAGAAGTCTACTCCTATGGCAGCTATTATTGCAGGTGTAGTTTCCGGGTTACTTATGCTCTCTCTTCTCGGATTTTTTGTTTTCCGGCGAGGGAGAAAGGCCAAGGACTATAGCTCAAGTCAAGTAAAGTGGGGTCTGCTTTCTTTTCCAACGACTACTAAGTCCACCACGTCTTACGGTTCATCTCTGCCGTCCGAGCTGTGTCATCGCTTTTCATTGGCGGAGATCAGAGCCGCCACGCAAAACTTTGATGATTCGAACGTTATTGGGGTTGGCGGGTTTGGTAACGTGTACAAAGGTACCATCAACGGTGCGTCCACCCCCGTTGCGATCAAACGGCTGAAAGCGAAGTCGTCACAGGGTGCCCTTGAGTTCAAGACGGAGATCGAATTGCTCTCCCAACTCCGTCACGTCCATCTCGTGTCTCTGGTCGGGTACTGTGACGACAATGGTGAGATGATTTTGGTGTATGACTATATGGAAAATGGGACCCTACGCGATCATTTGTACGACTCTGAAAATCCACCTCTTCCTTGGGAACAAAGGCTTCAAGTTTGTATTGGTGCGGCGCGTGGGTTGCACTACCTTCACACTGGTGTCAAGTGTATGATCATCCACCGAGACGTGAAGAGCACGAACATCTTGCTGGACGATAAATGGGTGGCCAAGGTCGCTGATTTCGGGTTGTCGAAAATGGGCACGACCACCATGTCCAAGACCCACATTAGCACCATGGTCAAAGGCAGTTTTGGCTATCTCGACCCGGAGTACTACCGTCGTCAACAGTTGACTGAGAAGTCTGATGTGTACTCGTTCGGCGTAGTATTGTGTGAGGTGTTGTGTGCTAGGCCGGCTTTGATCCGTACAGCGGACAAGAAGCAAATGAACCTAGCTGCATGGTTTAAGACCTGTCATGGAAACGGAACGCTTGACCAAATCATTGACCCGAATTTGAGGGGTAAGATTGTAAATGAGTGCTTGAACAAGTTTGTTGAAATTGCAATTAGTTGTATGCATGATAATAGGAGTGAACGACCGTCCATGAATGATGTTATATGGGCGCTTGAGTGTGCATTAAAACTTCTACAGACCGCAGAGGGTTCGGATTTGGATTTCAATGCCGGAAAGAAGGGAGAAGATGAGGCTTCACTGGTGAATGATAGTGATGCAGGGTTTAGTGGCACATGGGAAGACTCATCAGGTTCGAAGAACAGCAAGGTGACCAAAACTAGTAGTAGTAACCAAAATTCCAGTGCTAGTGATTCCATTAAAGGGTTGTCAGGTACAGTCTTCTCTGAGATCGATCCCAATGGATCGGAAGATGATTCGATCATATATGATCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

881

Amino Acids

97.39

Weight (kDa)

8.02

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 408	1.2e-29	Malectin-like domain
Pkinase	PF00069	518 - 784	1.3e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	520 - 785	2.7e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1322
AasI	GACNNNNNNGTC	3 cut(s)	1459, 2008, 2095
Acc36I	ACCTGC	2 cut(s)	438, 1322
Acc65I	GGTACC	2 cut(s)	191, 1598
AccB1I	GGYRCC	4 cut(s)	191, 428, 1598, 1661
AccBSI	CCGCTC	1 cut(s)	1059
AccI	GTMKAC	3 cut(s)	477, 1178, 1307
AccII	CGCG	3 cut(s)	220, 1797, 1870
AclI	AACGTT	1 cut(s)	1560
AclWI	GGATC	4 cut(s)	917, 2152, 2597, 2620
AcoI	YGGCCR	4 cut(s)	124, 304, 1014, 1962
AcsI	RAATTY	8 cut(s)	176, 275, 311, 467, 741, 767, 2248, 2545
AcuI	CTGAAG	1 cut(s)	576
AdeI	CACNNNGTG	1 cut(s)	1661
AfeI	AGCGCT	1 cut(s)	1161
AfiI	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1273, 2167, 2571
AflIII	ACRYGT	2 cut(s)	1101, 1587
AgeI	ACCGGT	2 cut(s)	65, 572
AhlI	ACTAGT	1 cut(s)	2528
AjiI	CACGTC	3 cut(s)	1470, 1711, 1924
AjnI	CCWGG	2 cut(s)	939, 1272
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AleI	CACNNNNGTG	1 cut(s)	1893
Alw21I	GWGCWC	3 cut(s)	137, 804, 1934
Alw26I	GTCTC	5 cut(s)	490, 940, 1116, 1728, 1914
AlwI	GGATC	4 cut(s)	917, 2152, 2597, 2620
AlwNI	CAGNNNCTG	1 cut(s)	499
Aor51HI	AGCGCT	1 cut(s)	1161
AoxI	GGCC	7 cut(s)	124, 304, 682, 1014, 1398, 1962, 2147
ApeKI	GCWGC	3 cut(s)	212, 1319, 2192
ApoI	RAATTY	8 cut(s)	176, 275, 311, 467, 741, 767, 2248, 2545
AsiGI	ACCGGT	2 cut(s)	65, 572
Asp718I	GGTACC	2 cut(s)	191, 1598
AspLEI	GCGC	4 cut(s)	617, 1162, 1870, 2362
AspS9I	GGNCC	4 cut(s)	450, 683, 1253, 1788
AsuC2I	CCSGG	4 cut(s)	303, 350, 1345, 2063
AsuHPI	GGTGA	9 cut(s)	55, 94, 172, 376, 499, 955, 1763, 2464, 2530
AsuII	TTCGAA	2 cut(s)	1556, 2504
AsuNHI	GCTAGC	1 cut(s)	233
AvaII	GGWCC	3 cut(s)	450, 1253, 1788
BaeGI	GKGCMC	2 cut(s)	1666, 2000
BaeI	ACNNNNGTAYC	2 cut(s)	1582, 1615
BalI	TGGCCA	2 cut(s)	1016, 1964
BanI	GGYRCC	4 cut(s)	191, 428, 1598, 1661
BanII	GRGCYC	3 cut(s)	137, 804, 1292
BauI	CACGAG	1 cut(s)	1718
BbsI	GAAGAC	2 cut(s)	2496, 2581
Bbv12I	GWGCWC	3 cut(s)	137, 804, 1934
BbvI	GCAGC	3 cut(s)	199, 1331, 2179
BccI	CCATC	7 cut(s)	215, 649, 695, 890, 1205, 1610, 1722
BceAI	ACGGC	2 cut(s)	1474, 1652
BcgI	CGANNNNNNTGC	6 cut(s)	204, 238, 1924, 1958, 2382, 2416
BciT130I	CCWGG	2 cut(s)	941, 1274
BclI	TGATCA	1 cut(s)	1908
BcnI	CCSGG	4 cut(s)	303, 350, 1345, 2063
BcoDI	GTCTC	5 cut(s)	490, 940, 1116, 1728, 1914
BcuI	ACTAGT	1 cut(s)	2528
BfaI	CTAG	8 cut(s)	234, 612, 1148, 1211, 2145, 2189, 2529, 2556
BfmI	CTRYAG	2 cut(s)	1408, 2384
BfoI	RGCGCY	2 cut(s)	1163, 2363
BfuAI	ACCTGC	2 cut(s)	438, 1322
BisI	GCNGC	7 cut(s)	115, 213, 390, 1320, 1533, 1866, 2193
BlpI	GCTNAGC	1 cut(s)	1226
BlsI	GCNGC	7 cut(s)	116, 214, 391, 1321, 1534, 1867, 2194
BmcAI	AGTACT	2 cut(s)	1152, 2069
Bme1390I	CCNGG	6 cut(s)	303, 350, 941, 1274, 1345, 2063
Bme18I	GGWCC	3 cut(s)	450, 1253, 1788
BmgBI	CACGTC	3 cut(s)	1470, 1711, 1924
BmgT120I	GGNCC	4 cut(s)	450, 683, 1253, 1788
BmiI	GGNNCC	9 cut(s)	193, 430, 452, 685, 1255, 1600, 1663, 1789, 1790
BmrFI	CCNGG	6 cut(s)	303, 350, 941, 1274, 1345, 2063
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	4 cut(s)	206, 517, 1183, 2455
BmtI	GCTAGC	1 cut(s)	237
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	2 cut(s)	2496, 2581
BpmI	CTGGAG	2 cut(s)	521, 671
Bpu1102I	GCTNAGC	1 cut(s)	1226
Bpu14I	TTCGAA	2 cut(s)	1556, 2504
BpuEI	CTTGAG	4 cut(s)	1148, 1399, 1688, 2384
BpuMI	CCSGG	4 cut(s)	303, 350, 1345, 2063
Bsa29I	ATCGAT	1 cut(s)	2601
BsaBI	GATNNNNATC	1 cut(s)	635
BsaJI	CCNNGG	5 cut(s)	1272, 1401, 1832, 1965, 2031
BsaWI	WCCGGW	6 cut(s)	65, 88, 572, 707, 717, 1114
BsaXI	ACNNNNNCTCC	2 cut(s)	644, 674
Bsc4I	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1273, 2167, 2571
Bse118I	RCCGGY	4 cut(s)	65, 392, 572, 2149
Bse1I	ACTGG	7 cut(s)	202, 504, 842, 1076, 1897, 2454, 2550
Bse8I	GATNNNNATC	1 cut(s)	635
BseBI	CCWGG	2 cut(s)	941, 1274
BseCI	ATCGAT	1 cut(s)	2601
BseDI	CCNNGG	5 cut(s)	1272, 1401, 1832, 1965, 2031
BseGI	GGATG	6 cut(s)	45, 197, 315, 757, 876, 1911
BseJI	GATNNNNATC	1 cut(s)	635
BseLI	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1273, 2167, 2571
BseMII	CTCAG	5 cut(s)	160, 1170, 1240, 2082, 2586
BseNI	ACTGG	7 cut(s)	202, 504, 842, 1076, 1897, 2454, 2550
BseRI	GAGGAG	1 cut(s)	395
BseSI	GKGCMC	2 cut(s)	1666, 2000
BseXI	GCAGC	3 cut(s)	199, 1331, 2179
BsgI	GTGCAG	1 cut(s)	198
Bsh1236I	CGCG	3 cut(s)	220, 1797, 1870
Bsh1285I	CGRYCG	3 cut(s)	224, 633, 2336
BshFI	GGCC	7 cut(s)	126, 306, 684, 1016, 1400, 1964, 2149
BshNI	GGYRCC	4 cut(s)	191, 428, 1598, 1661
BshTI	ACCGGT	2 cut(s)	65, 572
BshVI	ATCGAT	1 cut(s)	2601
BsiEI	CGRYCG	3 cut(s)	224, 633, 2336
BsiHKAI	GWGCWC	3 cut(s)	137, 804, 1934
BsiWI	CGTACG	1 cut(s)	531
BslFI	GGGAC	4 cut(s)	227, 436, 740, 1801
BslI	CCNNNNNNNGG	6 cut(s)	258, 724, 907, 1273, 2167, 2571
BsmAI	GTCTC	5 cut(s)	490, 940, 1116, 1728, 1914
BsmBI	CGTCTC	1 cut(s)	1914
BsmFI	GGGAC	4 cut(s)	227, 436, 740, 1801
BsnI	GGCC	7 cut(s)	126, 306, 684, 1016, 1400, 1964, 2149
Bsp119I	TTCGAA	2 cut(s)	1556, 2504
Bsp1286I	GDGCHC	6 cut(s)	137, 804, 1292, 1666, 1934, 2000
Bsp1407I	TGTACA	1 cut(s)	1590
Bsp1720I	GCTNAGC	1 cut(s)	1226
Bsp19I	CCATGG	1 cut(s)	2031
BspANI	GGCC	7 cut(s)	126, 306, 684, 1016, 1400, 1964, 2149
BspCNI	CTCAG	5 cut(s)	159, 1169, 1239, 2083, 2587
BspDI	ATCGAT	1 cut(s)	2601
BspFNI	CGCG	3 cut(s)	220, 1797, 1870
BspLI	GGNNCC	9 cut(s)	193, 430, 452, 685, 1255, 1600, 1663, 1789, 1790
BspMI	ACCTGC	2 cut(s)	438, 1322
BspOI	GCTAGC	1 cut(s)	237
BspPI	GGATC	4 cut(s)	917, 2152, 2597, 2620
BspQI	GCTCTTC	2 cut(s)	1280, 1922
BspT104I	TTCGAA	2 cut(s)	1556, 2504
BspT107I	GGYRCC	4 cut(s)	191, 428, 1598, 1661
BsrBI	CCGCTC	1 cut(s)	1059
BsrFI	RCCGGY	4 cut(s)	65, 392, 572, 2149
BsrGI	TGTACA	1 cut(s)	1590
BsrI	ACTGG	7 cut(s)	202, 504, 842, 1076, 1897, 2454, 2550
BssAI	RCCGGY	4 cut(s)	65, 392, 572, 2149
BssECI	CCNNGG	5 cut(s)	1272, 1401, 1832, 1965, 2031
BssNAI	GTATAC	1 cut(s)	1179
BssSI	CACGAG	1 cut(s)	1718
BssT1I	CCWWGG	4 cut(s)	1401, 1832, 1965, 2031
Bst1107I	GTATAC	1 cut(s)	1179
Bst2BI	CACGAG	1 cut(s)	1718
Bst2UI	CCWGG	2 cut(s)	941, 1274
Bst4CI	ACNGT	7 cut(s)	1478, 1610, 1739, 2075, 2085, 2337, 2587
Bst6I	CTCTTC	6 cut(s)	62, 380, 1280, 1368, 1833, 1922
BstAUI	TGTACA	1 cut(s)	1590
BstBI	TTCGAA	2 cut(s)	1556, 2504
BstC8I	GCNNGC	7 cut(s)	112, 235, 323, 394, 619, 776, 2151
BstDEI	CTNAG	7 cut(s)	146, 919, 1156, 1226, 1458, 2091, 2595
BstDSI	CCRYGG	1 cut(s)	2031
BstEII	GGTNACC	1 cut(s)	2518
BstF5I	GGATG	6 cut(s)	45, 197, 315, 757, 876, 1911
BstFNI	CGCG	3 cut(s)	220, 1797, 1870
BstH2I	RGCGCY	2 cut(s)	1163, 2363
BstHHI	GCGC	4 cut(s)	617, 1162, 1870, 2362
BstMAI	GTCTC	5 cut(s)	490, 940, 1116, 1728, 1914
BstMCI	CGRYCG	3 cut(s)	224, 633, 2336
BstMWI	GCNNNNNNNGC	9 cut(s)	123, 132, 141, 1328, 1495, 1876, 1970, 2049, 2150
BstNI	CCWGG	2 cut(s)	941, 1274
BstNSI	RCATGY	1 cut(s)	1105
BstPI	GGTNACC	1 cut(s)	2518
BstSCI	CCNGG	6 cut(s)	301, 348, 939, 1272, 1343, 2061
BstSFI	CTRYAG	2 cut(s)	1408, 2384
BstSLI	GKGCMC	2 cut(s)	1666, 2000
BstUI	CGCG	3 cut(s)	220, 1797, 1870
BstV1I	GCAGC	3 cut(s)	199, 1331, 2179
BstV2I	GAAGAC	2 cut(s)	2496, 2581
BstX2I	RGATCY	1 cut(s)	922
BstYI	RGATCY	1 cut(s)	922
BstZ17I	GTATAC	1 cut(s)	1179
Bsu15I	ATCGAT	1 cut(s)	2601
BsuRI	GGCC	7 cut(s)	126, 306, 684, 1016, 1400, 1964, 2149
BsuTUI	ATCGAT	1 cut(s)	2601
BtgI	CCRYGG	1 cut(s)	2031
BtgZI	GCGATG	2 cut(s)	193, 1490
BtrI	CACGTC	3 cut(s)	1470, 1711, 1924
BtsCI	GGATG	6 cut(s)	45, 197, 315, 757, 876, 1911
BtsIMutI	CAGTG	3 cut(s)	1890, 2447, 2557
BveI	ACCTGC	2 cut(s)	438, 1322
Cac8I	GCNNGC	7 cut(s)	112, 235, 323, 394, 619, 776, 2151
CaiI	CAGNNNCTG	1 cut(s)	499
CfoI	GCGC	4 cut(s)	617, 1162, 1870, 2362
Cfr10I	RCCGGY	4 cut(s)	65, 392, 572, 2149
Cfr13I	GGNCC	4 cut(s)	450, 683, 1253, 1788
ClaI	ATCGAT	1 cut(s)	2601
CseI	GACGC	2 cut(s)	446, 1602
CsiI	ACCWGGT	1 cut(s)	939
CspAI	ACCGGT	2 cut(s)	65, 572
CspCI	CAANNNNNGTGG	4 cut(s)	1409, 1444, 1606, 1641
DdeI	CTNAG	7 cut(s)	146, 919, 1156, 1226, 1458, 2091, 2595
DraIII	CACNNNGTG	1 cut(s)	1661
DrdI	GACNNNNNNGTC	3 cut(s)	1459, 2008, 2095
DseDI	GACNNNNNNGTC	3 cut(s)	1459, 2008, 2095
EaeI	YGGCCR	4 cut(s)	124, 304, 1014, 1962
Eam1104I	CTCTTC	6 cut(s)	62, 380, 1280, 1368, 1833, 1922
EarI	CTCTTC	6 cut(s)	62, 380, 1280, 1368, 1833, 1922
EciI	GGCGGA	2 cut(s)	693, 1535
Ecl136II	GAGCTC	2 cut(s)	135, 802
Eco130I	CCWWGG	4 cut(s)	1401, 1832, 1965, 2031
Eco24I	GRGCYC	3 cut(s)	137, 804, 1292
Eco32I	GATATC	1 cut(s)	100
Eco47I	GGWCC	3 cut(s)	450, 1253, 1788
Eco47III	AGCGCT	1 cut(s)	1161
Eco53kI	GAGCTC	2 cut(s)	135, 802
Eco57I	CTGAAG	1 cut(s)	576
Eco91I	GGTNACC	1 cut(s)	2518
EcoICRI	GAGCTC	2 cut(s)	135, 802
EcoO109I	RGGNCCY	3 cut(s)	450, 683, 1788
EcoO65I	GGTNACC	1 cut(s)	2518
EcoRI	GAATTC	1 cut(s)	467
EcoRII	CCWGG	2 cut(s)	939, 1272
EcoRV	GATATC	1 cut(s)	100
EcoT14I	CCWWGG	4 cut(s)	1401, 1832, 1965, 2031
EcoT22I	ATGCAT	1 cut(s)	2316
EcoT38I	GRGCYC	3 cut(s)	137, 804, 1292
ErhI	CCWWGG	4 cut(s)	1401, 1832, 1965, 2031
Esp3I	CGTCTC	1 cut(s)	1914
FaqI	GGGAC	4 cut(s)	227, 436, 740, 1801
FauI	CCCGC	4 cut(s)	452, 462, 1275, 1568
FbaI	TGATCA	1 cut(s)	1908
FblI	GTMKAC	3 cut(s)	477, 1178, 1307
Fnu4HI	GCNGC	7 cut(s)	115, 213, 390, 1320, 1533, 1866, 2193
FokI	GGATG	6 cut(s)	32, 184, 302, 764, 883, 1898
FriOI	GRGCYC	3 cut(s)	137, 804, 1292
Fsp4HI	GCNGC	7 cut(s)	115, 213, 390, 1320, 1533, 1866, 2193
FspBI	CTAG	8 cut(s)	234, 612, 1148, 1211, 2145, 2189, 2529, 2556
GlaI	GCGC	4 cut(s)	616, 1161, 1869, 2361
GluI	GCNGC	7 cut(s)	115, 213, 390, 1320, 1533, 1866, 2193
GsuI	CTGGAG	2 cut(s)	521, 671
HaeII	RGCGCY	2 cut(s)	1163, 2363
HaeIII	GGCC	7 cut(s)	126, 306, 684, 1016, 1400, 1964, 2149
HgaI	GACGC	2 cut(s)	446, 1602
HhaI	GCGC	4 cut(s)	617, 1162, 1870, 2362
Hin6I	GCGC	4 cut(s)	615, 1160, 1868, 2360
HinP1I	GCGC	4 cut(s)	615, 1160, 1868, 2360
HincII	GTYRAC	4 cut(s)	94, 1138, 2081, 2088
HindII	GTYRAC	4 cut(s)	94, 1138, 2081, 2088
HpaI	GTTAAC	1 cut(s)	1138
HphI	GGTGA	9 cut(s)	55, 94, 172, 376, 499, 955, 1763, 2464, 2530
Hpy188III	TCNNGA	8 cut(s)	335, 484, 650, 821, 1165, 1201, 1675, 2057
Hpy99I	CGWCG	4 cut(s)	440, 677, 740, 2079
HpyAV	CCTTC	3 cut(s)	520, 1895, 2422
HpyCH4III	ACNGT	7 cut(s)	1478, 1610, 1739, 2075, 2085, 2337, 2587
HpyCH4IV	ACGT	7 cut(s)	672, 1092, 1469, 1560, 1587, 1710, 1923
HpyCH4V	TGCA	9 cut(s)	215, 325, 1331, 1879, 2195, 2300, 2314, 2372, 2468
HpyF10VI	GCNNNNNNNGC	9 cut(s)	123, 132, 141, 1328, 1495, 1876, 1970, 2049, 2150
HpyF3I	CTNAG	7 cut(s)	146, 919, 1156, 1226, 1458, 2091, 2595
HpySE526I	ACGT	7 cut(s)	672, 1092, 1469, 1560, 1587, 1710, 1923
HspAI	GCGC	4 cut(s)	615, 1160, 1868, 2360
KflI	GGGWCCC	1 cut(s)	1788
KpnI	GGTACC	2 cut(s)	195, 1602
KroI	GCCGGC	2 cut(s)	392, 2149
KroNI	GCCGGC	2 cut(s)	394, 2151
Ksp22I	TGATCA	1 cut(s)	1908
KspAI	GTTAAC	1 cut(s)	1138
LguI	GCTCTTC	2 cut(s)	1280, 1922
LmnI	GCTCC	4 cut(s)	140, 275, 368, 1061
Lsp1109I	GCAGC	3 cut(s)	199, 1331, 2179
LweI	GCATC	4 cut(s)	206, 517, 1183, 2455
MabI	ACCWGGT	1 cut(s)	939
MaeI	CTAG	8 cut(s)	234, 612, 1148, 1211, 2145, 2189, 2529, 2556
MaeII	ACGT	7 cut(s)	672, 1092, 1469, 1560, 1587, 1710, 1923
MaeIII	GTNAC	9 cut(s)	61, 382, 1347, 1583, 1653, 1706, 1739, 2518, 2537
MbiI	CCGCTC	1 cut(s)	1059
MflI	RGATCY	1 cut(s)	922
MhlI	GDGCHC	6 cut(s)	137, 804, 1292, 1666, 1934, 2000
MlsI	TGGCCA	2 cut(s)	1016, 1964
MluNI	TGGCCA	2 cut(s)	1016, 1964
MlyI	GAGTC	4 cut(s)	164, 942, 1805, 2486
MmeI	TCCRAC	3 cut(s)	382, 1099, 1472
Mox20I	TGGCCA	2 cut(s)	1016, 1964
Mph1103I	ATGCAT	1 cut(s)	2316
MroNI	GCCGGC	2 cut(s)	392, 2149
MscI	TGGCCA	2 cut(s)	1016, 1964
MseI	TTAA	5 cut(s)	758, 1137, 2202, 2375, 2568
MslI	CAYNNNNRTG	4 cut(s)	710, 957, 1106, 1893
Msp20I	TGGCCA	2 cut(s)	1016, 1964
MspA1I	CMGCKG	2 cut(s)	457, 2168
MspR9I	CCNGG	6 cut(s)	303, 350, 941, 1274, 1345, 2063
MvaI	CCWGG	2 cut(s)	941, 1274
MvnI	CGCG	3 cut(s)	220, 1797, 1870
MwoI	GCNNNNNNNGC	9 cut(s)	123, 132, 141, 1328, 1495, 1876, 1970, 2049, 2150
NaeI	GCCGGC	2 cut(s)	394, 2151
NciI	CCSGG	4 cut(s)	303, 350, 1345, 2063
NcoI	CCATGG	1 cut(s)	2031
NgoMIV	GCCGGC	2 cut(s)	392, 2149
NheI	GCTAGC	1 cut(s)	233
NlaIV	GGNNCC	9 cut(s)	193, 430, 452, 685, 1255, 1600, 1663, 1789, 1790
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	6 cut(s)	61, 382, 1653, 1706, 1739, 2518
NsiI	ATGCAT	1 cut(s)	2316
NspI	RCATGY	1 cut(s)	1105
NspV	TTCGAA	2 cut(s)	1556, 2504
OliI	CACNNNNGTG	1 cut(s)	1893
PaqCI	CACCTGC	1 cut(s)	1322
PciI	ACATGT	1 cut(s)	1101
PciSI	GCTCTTC	2 cut(s)	1280, 1922
PcsI	WCGNNNNNNNCGW	1 cut(s)	1716
PdiI	GCCGGC	2 cut(s)	394, 2151
PfeI	GAWTC	9 cut(s)	549, 666, 968, 1072, 1172, 1243, 1553, 2561, 2624
Pfl23II	CGTACG	1 cut(s)	531
PinAI	ACCGGT	2 cut(s)	65, 572
PkrI	GCNGC	7 cut(s)	116, 214, 391, 1321, 1534, 1867, 2194
Ple19I	CGATCG	2 cut(s)	224, 633
PleI	GAGTC	4 cut(s)	164, 942, 1805, 2486
PpsI	GAGTC	4 cut(s)	164, 942, 1805, 2486
PpuMI	RGGWCCY	2 cut(s)	450, 1788
PscI	ACATGT	1 cut(s)	1101
Psp124BI	GAGCTC	2 cut(s)	137, 804
Psp1406I	AACGTT	1 cut(s)	1560
Psp5II	RGGWCCY	2 cut(s)	450, 1788
Psp6I	CCWGG	2 cut(s)	939, 1272
PspEI	GGTNACC	1 cut(s)	2518
PspGI	CCWGG	2 cut(s)	939, 1272
PspLI	CGTACG	1 cut(s)	531
PspN4I	GGNNCC	9 cut(s)	193, 430, 452, 685, 1255, 1600, 1663, 1789, 1790
PspPI	GGNCC	4 cut(s)	450, 683, 1253, 1788
PspPPI	RGGWCCY	2 cut(s)	450, 1788
PstNI	CAGNNNCTG	1 cut(s)	499
PsuI	RGATCY	1 cut(s)	922
PvuI	CGATCG	2 cut(s)	224, 633
RseI	CAYNNNNRTG	4 cut(s)	710, 957, 1106, 1893
SacI	GAGCTC	2 cut(s)	137, 804
SapI	GCTCTTC	2 cut(s)	1280, 1922
SaqAI	TTAA	5 cut(s)	758, 1137, 2202, 2375, 2568
SatI	GCNGC	7 cut(s)	115, 213, 390, 1320, 1533, 1866, 2193
Sau96I	GGNCC	4 cut(s)	450, 683, 1253, 1788
ScaI	AGTACT	2 cut(s)	1152, 2069
SchI	GAGTC	4 cut(s)	164, 942, 1805, 2486
ScrFI	CCNGG	6 cut(s)	303, 350, 941, 1274, 1345, 2063
SduI	GDGCHC	6 cut(s)	137, 804, 1292, 1666, 1934, 2000
SexAI	ACCWGGT	1 cut(s)	939
SfaNI	GCATC	4 cut(s)	206, 517, 1183, 2455
SfcI	CTRYAG	2 cut(s)	1408, 2384
SfuI	TTCGAA	2 cut(s)	1556, 2504
SinI	GGWCC	3 cut(s)	450, 1253, 1788
SmiMI	CAYNNNNRTG	4 cut(s)	710, 957, 1106, 1893
SmlI	CTYRAG	4 cut(s)	1163, 1414, 1667, 2363
SmoI	CTYRAG	4 cut(s)	1163, 1414, 1667, 2363
SpeI	ACTAGT	1 cut(s)	2528
SspI	AATATT	1 cut(s)	1036
SspMI	CTAG	8 cut(s)	234, 612, 1148, 1211, 2145, 2189, 2529, 2556
SstI	GAGCTC	2 cut(s)	137, 804
StyD4I	CCNGG	6 cut(s)	301, 348, 939, 1272, 1343, 2061
StyI	CCWWGG	4 cut(s)	1401, 1832, 1965, 2031
TaaI	ACNGT	7 cut(s)	1478, 1610, 1739, 2075, 2085, 2337, 2587
TaiI	ACGT	7 cut(s)	675, 1095, 1472, 1563, 1590, 1713, 1926
TaqII	GACCGA	1 cut(s)	849
TatI	WGTACW	5 cut(s)	984, 1150, 1590, 2067, 2106
TauI	GCSGC	4 cut(s)	117, 392, 1535, 1868
TfiI	GAWTC	9 cut(s)	549, 666, 968, 1072, 1172, 1243, 1553, 2561, 2624
Tru1I	TTAA	5 cut(s)	758, 1137, 2202, 2375, 2568
Tru9I	TTAA	5 cut(s)	758, 1137, 2202, 2375, 2568
TscAI	CASTG	3 cut(s)	1897, 2454, 2557
TseFI	GTSAC	6 cut(s)	61, 382, 1653, 1706, 1739, 2518
TseI	GCWGC	3 cut(s)	212, 1319, 2192
Tsp45I	GTSAC	6 cut(s)	61, 382, 1653, 1706, 1739, 2518
TspGWI	ACGGA	6 cut(s)	370, 561, 1694, 1694, 2150, 2235
TspRI	CASTG	3 cut(s)	1897, 2454, 2557
VpaK11BI	GGWCC	3 cut(s)	450, 1253, 1788
XapI	RAATTY	8 cut(s)	176, 275, 311, 467, 741, 767, 2248, 2545
XceI	RCATGY	1 cut(s)	1105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1830
XmiI	GTMKAC	3 cut(s)	477, 1178, 1307
XspI	CTAG	8 cut(s)	234, 612, 1148, 1211, 2145, 2189, 2529, 2556
ZrmI	AGTACT	2 cut(s)	1152, 2069
Zsp2I	ATGCAT	1 cut(s)	2316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.