RLG00000021537

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
76254609 .. 76257104
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021537

Sequence Viewer

Length: 2496 bp
ATGGAACCGATTCTCATTTCTCTCTACCTCTCCTTGTTTCTCCACATCCTCACTCTCCTAGAGGCCGGTCAGTCGCCACCTATATACACTCCGGTGGATGATATCACCCTCGACTGTGGCAATTTGGGGCAACGCTCGAATAGCTATGACCCCAGGATTTGGAGTGGAGACATCAACTCAACATTTTCCCCCAAACAAGATGGTGACAGTAACGCCACATCCCAATTCAGAAAAGCACCTCCGTCGTTATCACAATCCGCCAGCCAAGTCCCTTACACCACTGCCCGCCTTTCTTACTCGGAATTCACTTACAGAATTCCTCTTTCTCCCGGGAAAAAGTTCATCCGCTTGCATTTCAACCCGGCTTCATACCCAGACTTCCACATCTCCAACTCCCTCTTCTCTGTCACAGCTAGCCACAACATCCGCGACTACATCCTCCTCAAAGACTTCAGAGCTTACATCACTGCGGACGATGCTTACAGGGAGATGCCGCTCATGAGAGAATTCTGTGTCAACATAGAGACACAACATAGTTTGAACATCACATTCAGTCCCAGCAAAGATGCATACGCTTTCATCAATGGGATTGAAATCGTGTCTATGCCCATCAAAATTTACACCACTTCAGTTCTTTCCATCGGCAGTGATAGCCCTTATTCATTCGAAAGCAGAATAGCTCTGGACATGGTGTACCGAATCAACATAGGCGGAAAGCCGATCAACTCTACTGAAGACACCGGAATGTACCGGAAATGGGACGCTGCCGACGACATGTATTTGGATGGTTTTAGTAAAAAATACAGCGTGCTAGCACAGAACAATACAGTTGAGCTCAATTTTGTCGAAACTCCAGAGTACGCTGCTCCAAAAGAAGTTTACAATACAGGTCGGTCCCTGTGGATGAACAAGACTATCAACAAGAGTTACAATCTCACTTGGTCATTTCCTGTAGACTCTAACTTCTCCTACCTGGTTAGATTGCATTTTTGTGAGTTTGAGTCTAACGTTACCAAGAGCGGAGAGAGGACATTTGTAATTTACTTAGCCAATCAAACTGCTGAACAAGGAGCAGACGTAATTCTATGGAGTGGTGGAAATGGGATACCAACACTCAGAGACTACACCTTGCTCATGCTTGGCCCTAGAAGCCAGAAAAAAGTTAATCTCTCTATTGCATTGCAAGCATCACGAGTAGATGGGTTGACCGAATACAAGGATGCAATGTTGAATGGACTCGAAATCTTCAAGCTAATTTACCCAAAAGGTGATCTCAAATCCAACCCAGACCCATCAATGACACCGCATAGTAAATCGTCTCCTGTGCTTGCCCTCGTTGCTGGTGTAGTTTCCAGCATACTTGTGTTCTCTGTCCTCGGATGCTTAGCTTTCAGGAAAAGATGGAAAGTCAAGGACCCTGACTACAGGATAAGGAAGCTCACGACGACCCCCGGGTCATCATATCCGTGTCGCTACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAAAACTTCAGTGATGCTTTTATCATTGGAGGTGGAGGTTTTGGTAATGTATATAAAGGATGCATTGATGGTGGTGCCACTCCAGTTGCAATCAAACGGCTGAAACCAGAATCATCCCAAGGTGTCCATGAGTTTGAGACTGAAATTGAGATGCTCTCCCAACTCCGCCATCGCCATTTGGTTCCACTCATTGGATGTTGTACTGATAAAGGAGAGATGATCTTAGTGTATGATTACATGGCACAAGGGACCCTCCGTGACCATCTCTACCACACTAATACTCCACCTCTTCTTTGGGAACAACGGCTTCAGATTTGTATTGGTGCAGCTAGAGGATTGCAGTACCTCCATAGTGGTGTGAAGGGCACCATCATTCACCGAGATGTGAAGAGCACAAACATCTTATTGGATGACAACTGGGTGGCCAAGGTTTCAGATTTCGGGCTGTCCAAAGGCACAACTAACATGGCCAAAACCCACGTCAGCACGATTGTGAAAGGCAGTTTCGGGTATCTGGATCCAGAATACTACCGACGACAACGTCTGACTGAGAAGTCAGACGTCTACTCATTTGGTGTAGTTCTGTGCGAGGTATTATGTGCAAGGCCAGCAGTGATACATACAGAAGAGCTGAGGCAAGCCAGCCTGGCTGAGTGGGCCAAGAGCTGTCATCAGAACGGAGAACTTGATCAAATCATTGATCCAAGTTTGAGAGGTAAGATTGCAGCCGAGTGCTTGAATATATTCTCTGATGTAGCTATCAGTTGCATGCATGACGATGGGACCAAACGGCCGTCCATGAATGATGTTGTAAGAGGGCTTGAGCTTGCATTGGACCTTCAACGAAGCACAGAAGGGAACATCAACTGCACTGAAAAGATCAGTGAAACTGAAACAAGCAGTAGTGAGCAAAGTTGTGCAAACAACAATTCCATTATATGCATATCTGGGACAATCTTTTCTGAGATCAACAACCCAAGTGGGAGATGA

Protein Analysis

832

Amino Acids

92.71

Weight (kDa)

6.44

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 71 - 417 4.4e-27 Malectin-like domain
Malectin PF11721 231 - 368 2.7e-08 Malectin domain
Pkinase PF00069 510 - 773 1e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 511 - 775 9.3e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1453, 2046, 2059
AatII GACGTC 1 cut(s) 2070
AccB1I GGYRCC 2 cut(s) 1580, 1871
AccB7I CCANNNNNTGG 2 cut(s) 159, 1697
AccBSI CCGCTC 2 cut(s) 496, 1020
AccI GTMKAC 2 cut(s) 954, 2070
AccII CGCG 1 cut(s) 429
AclI AACGTT 1 cut(s) 1008
AclWI GGATC 3 cut(s) 2018, 2031, 2201
AcoI YGGCCR 3 cut(s) 1929, 1974, 2297
AcsI RAATTY 4 cut(s) 302, 315, 506, 615
AcuI CTGAAG 5 cut(s) 436, 612, 753, 1498, 1799
AcyI GRCGYC 1 cut(s) 2067
AfaI GTAC 5 cut(s) 695, 749, 860, 1708, 1850
AfiI CCNNNNNNNGG 3 cut(s) 159, 757, 1697
AflIII ACRYGT 1 cut(s) 774
AgsI TTSAA 7 cut(s) 358, 541, 593, 1231, 1249, 2245, 2348
AjiI CACGTC 1 cut(s) 1987
AjnI CCWGG 3 cut(s) 152, 972, 2151
AjuI GAANNNNNNNTTGG 2 cut(s) 383, 415
AleI CACNNNNGTG 2 cut(s) 92, 1997
Alw21I GWGCWC 2 cut(s) 837, 1901
Alw26I GTCTC 5 cut(s) 162, 518, 1113, 1323, 1637
AlwI GGATC 3 cut(s) 2018, 2031, 2201
Ama87I CYCGRG 2 cut(s) 329, 1451
AoxI GGCC 7 cut(s) 63, 1141, 1929, 1974, 2111, 2163, 2297
ApeKI GCWGC 4 cut(s) 764, 863, 1832, 2231
ApoI RAATTY 4 cut(s) 302, 315, 506, 615
ArsI GACNNNNNNTTYG 2 cut(s) 1971, 2003
Asp700I GAANNNNTTC 3 cut(s) 9, 338, 2249
AspS9I GGNCC 7 cut(s) 894, 1142, 1414, 1755, 2163, 2289, 2341
AsuC2I CCSGG 5 cut(s) 330, 331, 362, 1452, 1453
AsuHPI GGTGA 4 cut(s) 97, 215, 1280, 1874
AsuII TTCGAA 1 cut(s) 666
AsuNHI GCTAGC 2 cut(s) 413, 811
AvaI CYCGRG 2 cut(s) 329, 1451
AvaII GGWCC 5 cut(s) 894, 1414, 1755, 2289, 2341
BaeGI GKGCMC 1 cut(s) 1874
BalI TGGCCA 2 cut(s) 1931, 1976
BamHI GGATCC 1 cut(s) 2023
BanI GGYRCC 2 cut(s) 1580, 1871
BanII GRGCYC 1 cut(s) 837
BauI CACGAG 1 cut(s) 1191
BbsI GAAGAC 1 cut(s) 741
Bbv12I GWGCWC 2 cut(s) 837, 1901
BbvCI CCTCAGC 1 cut(s) 2138
BbvI GCAGC 4 cut(s) 751, 850, 1844, 2243
BceAI ACGGC 4 cut(s) 1619, 1826, 2284, 2312
BcgI CGANNNNNNTGC 2 cut(s) 225, 259
BciT130I CCWGG 3 cut(s) 154, 974, 2153
BciVI GTATCC 1 cut(s) 1098
BclI TGATCA 1 cut(s) 2194
BcnI CCSGG 5 cut(s) 330, 331, 362, 1452, 1453
BcoDI GTCTC 5 cut(s) 162, 518, 1113, 1323, 1637
BfaI CTAG 5 cut(s) 59, 414, 812, 1146, 1836
BfmI CTRYAG 2 cut(s) 951, 1423
BfuI GTATCC 1 cut(s) 1098
BglI GCCNNNNNGGC 1 cut(s) 2153
BisI GCNGC 6 cut(s) 494, 765, 864, 1500, 1833, 2232
BlpI GCTNAGC 1 cut(s) 1384
BlsI GCNGC 6 cut(s) 495, 766, 865, 1501, 1834, 2233
Bme1390I CCNGG 8 cut(s) 154, 330, 331, 362, 974, 1452, 1453, 2153
Bme18I GGWCC 5 cut(s) 894, 1414, 1755, 2289, 2341
BmeT110I CYCGRG 2 cut(s) 329, 1451
BmgBI CACGTC 1 cut(s) 1987
BmgT120I GGNCC 7 cut(s) 894, 1142, 1414, 1755, 2163, 2289, 2341
BmrFI CCNGG 8 cut(s) 154, 330, 331, 362, 974, 1452, 1453, 2153
BmrI ACTGGG 1 cut(s) 1933
BmsI GCATC 9 cut(s) 466, 480, 556, 1196, 1210, 1370, 1510, 1556, 1647
BmtI GCTAGC 2 cut(s) 417, 815
BmuI ACTGGG 1 cut(s) 1933
BpiI GAAGAC 1 cut(s) 741
BplI GAGNNNNNCTC 2 cut(s) 1646, 1678
BpmI CTGGAG 2 cut(s) 837, 1572
Bpu10I CCTNAGC 1 cut(s) 2138
Bpu1102I GCTNAGC 1 cut(s) 1384
Bpu14I TTCGAA 1 cut(s) 666
BpuEI CTTGAG 1 cut(s) 2348
BpuMI CCSGG 5 cut(s) 330, 331, 362, 1452, 1453
BsaBI GATNNNNATC 1 cut(s) 593
BsaHI GRCGYC 1 cut(s) 2067
BsaJI CCNNGG 7 cut(s) 152, 329, 1375, 1450, 1451, 1624, 1932
BsaWI WCCGGW 3 cut(s) 91, 740, 750
BsaXI ACNNNNNCTCC 4 cut(s) 1062, 1092, 1771, 1801
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 757, 1697
Bse118I RCCGGY 1 cut(s) 65
Bse1I ACTGG 3 cut(s) 1488, 1589, 1928
Bse3DI GCAATG 2 cut(s) 1178, 1230
Bse8I GATNNNNATC 1 cut(s) 593
BseBI CCWGG 3 cut(s) 154, 974, 2153
BseDI CCNNGG 7 cut(s) 152, 329, 1375, 1450, 1451, 1624, 1932
BseJI GATNNNNATC 1 cut(s) 593
BseLI CCNNNNNNNGG 3 cut(s) 159, 757, 1697
BseMI GCAATG 2 cut(s) 1178, 1230
BseMII CTCAG 5 cut(s) 1129, 2046, 2129, 2148, 2460
BseNI ACTGG 3 cut(s) 1488, 1589, 1928
BseRI GAGGAG 1 cut(s) 431
BseSI GKGCMC 1 cut(s) 1874
BseX3I CGGCCG 1 cut(s) 2297
BseXI GCAGC 4 cut(s) 751, 850, 1844, 2243
BseYI CCCAGC 1 cut(s) 557
BsgI GTGCAG 2 cut(s) 1851, 2359
Bsh1236I CGCG 1 cut(s) 429
Bsh1285I CGRYCG 1 cut(s) 2300
BshFI GGCC 7 cut(s) 65, 1143, 1931, 1976, 2113, 2165, 2299
BshNI GGYRCC 2 cut(s) 1580, 1871
BsiEI CGRYCG 1 cut(s) 2300
BsiHKAI GWGCWC 2 cut(s) 837, 1901
BsiHKCI CYCGRG 2 cut(s) 329, 1451
BsiSI CCGG 7 cut(s) 66, 92, 330, 362, 741, 751, 1452
BslFI GGGAC 7 cut(s) 254, 540, 773, 880, 1768, 2302, 2470
BslI CCNNNNNNNGG 3 cut(s) 159, 757, 1697
BsmAI GTCTC 5 cut(s) 162, 518, 1113, 1323, 1637
BsmBI CGTCTC 1 cut(s) 1323
BsmFI GGGAC 7 cut(s) 254, 540, 773, 880, 1768, 2302, 2470
BsnI GGCC 7 cut(s) 65, 1143, 1931, 1976, 2113, 2165, 2299
BsoBI CYCGRG 2 cut(s) 329, 1451
Bsp119I TTCGAA 1 cut(s) 666
Bsp1286I GDGCHC 3 cut(s) 837, 1874, 1901
Bsp143I GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
Bsp1720I GCTNAGC 1 cut(s) 1384
BspANI GGCC 7 cut(s) 65, 1143, 1931, 1976, 2113, 2165, 2299
BspCNI CTCAG 5 cut(s) 1128, 2047, 2130, 2149, 2461
BspFNI CGCG 1 cut(s) 429
BspHI TCATGA 1 cut(s) 498
BspOI GCTAGC 2 cut(s) 417, 815
BspPI GGATC 3 cut(s) 2018, 2031, 2201
BspQI GCTCTTC 2 cut(s) 1889, 2127
BspT104I TTCGAA 1 cut(s) 666
BspT107I GGYRCC 2 cut(s) 1580, 1871
BsrBI CCGCTC 2 cut(s) 496, 1020
BsrDI GCAATG 2 cut(s) 1178, 1230
BsrFI RCCGGY 1 cut(s) 65
BsrI ACTGG 3 cut(s) 1488, 1589, 1928
BssAI RCCGGY 1 cut(s) 65
BssECI CCNNGG 7 cut(s) 152, 329, 1375, 1450, 1451, 1624, 1932
BssMI GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
BssNI GRCGYC 1 cut(s) 2067
BssSI CACGAG 1 cut(s) 1191
BssT1I CCWWGG 2 cut(s) 1624, 1932
Bst2BI CACGAG 1 cut(s) 1191
Bst2UI CCWGG 3 cut(s) 154, 974, 2153
Bst4CI ACNGT 3 cut(s) 116, 209, 829
Bst6I CTCTTC 4 cut(s) 404, 1800, 1889, 2127
BstACI GRCGYC 1 cut(s) 2067
BstBI TTCGAA 1 cut(s) 666
BstDEI CTNAG 8 cut(s) 1045, 1115, 1384, 1729, 2055, 2138, 2157, 2469
BstFNI CGCG 1 cut(s) 429
BstKTI GATC 9 cut(s) 723, 1273, 1494, 1728, 2026, 2197, 2209, 2388, 2475
BstMAI GTCTC 5 cut(s) 162, 518, 1113, 1323, 1637
BstMBI GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
BstMCI CGRYCG 1 cut(s) 2300
BstMWI GCNNNNNNNGC 9 cut(s) 141, 476, 651, 1149, 1184, 1337, 2114, 2153, 2162
BstNI CCWGG 3 cut(s) 154, 974, 2153
BstNSI RCATGY 2 cut(s) 778, 2278
BstSCI CCNGG 8 cut(s) 152, 328, 329, 360, 972, 1450, 1451, 2151
BstSFI CTRYAG 2 cut(s) 951, 1423
BstSLI GKGCMC 1 cut(s) 1874
BstUI CGCG 1 cut(s) 429
BstV1I GCAGC 4 cut(s) 751, 850, 1844, 2243
BstV2I GAAGAC 1 cut(s) 741
BstX2I RGATCY 1 cut(s) 2023
BstYI RGATCY 1 cut(s) 2023
BstZI CGGCCG 1 cut(s) 2297
BsuI GTATCC 1 cut(s) 1098
BsuRI GGCC 7 cut(s) 65, 1143, 1931, 1976, 2113, 2165, 2299
BtgZI GCGATG 1 cut(s) 1661
BtrI CACGTC 1 cut(s) 1987
BtsI GCAGTG 4 cut(s) 279, 465, 652, 2124
BtsIMutI CAGTG 8 cut(s) 279, 465, 652, 1481, 1522, 2124, 2376, 2395
CciI TCATGA 1 cut(s) 498
Cfr10I RCCGGY 1 cut(s) 65
Cfr13I GGNCC 7 cut(s) 894, 1142, 1414, 1755, 2163, 2289, 2341
Cfr9I CCCGGG 2 cut(s) 329, 1451
CseI GACGC 1 cut(s) 770
CsiI ACCWGGT 1 cut(s) 972
Csp6I GTAC 5 cut(s) 694, 748, 859, 1707, 1849
CspCI CAANNNNNGTGG 3 cut(s) 1573, 1608, 2467
CviQI GTAC 5 cut(s) 694, 748, 859, 1707, 1849
DdeI CTNAG 8 cut(s) 1045, 1115, 1384, 1729, 2055, 2138, 2157, 2469
DpnI GATC 9 cut(s) 722, 1272, 1493, 1727, 2025, 2196, 2208, 2387, 2474
DpnII GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
DrdI GACNNNNNNGTC 3 cut(s) 1453, 2046, 2059
DseDI GACNNNNNNGTC 3 cut(s) 1453, 2046, 2059
EaeI YGGCCR 3 cut(s) 1929, 1974, 2297
EagI CGGCCG 1 cut(s) 2297
Eam1104I CTCTTC 4 cut(s) 404, 1800, 1889, 2127
EarI CTCTTC 4 cut(s) 404, 1800, 1889, 2127
EciI GGCGGA 3 cut(s) 247, 726, 1661
Ecl136II GAGCTC 1 cut(s) 835
EclXI CGGCCG 1 cut(s) 2297
Eco130I CCWWGG 2 cut(s) 1624, 1932
Eco24I GRGCYC 1 cut(s) 837
Eco32I GATATC 1 cut(s) 103
Eco47I GGWCC 5 cut(s) 894, 1414, 1755, 2289, 2341
Eco52I CGGCCG 1 cut(s) 2297
Eco53kI GAGCTC 1 cut(s) 835
Eco57I CTGAAG 5 cut(s) 436, 612, 753, 1498, 1799
Eco88I CYCGRG 2 cut(s) 329, 1451
EcoICRI GAGCTC 1 cut(s) 835
EcoO109I RGGNCCY 2 cut(s) 1414, 1755
EcoRI GAATTC 3 cut(s) 302, 315, 506
EcoRII CCWGG 3 cut(s) 152, 972, 2151
EcoRV GATATC 1 cut(s) 103
EcoT14I CCWWGG 2 cut(s) 1624, 1932
EcoT22I ATGCAT 4 cut(s) 571, 1571, 2280, 2450
EcoT38I GRGCYC 1 cut(s) 837
ErhI CCWWGG 2 cut(s) 1624, 1932
Esp3I CGTCTC 1 cut(s) 1323
FaqI GGGAC 7 cut(s) 254, 540, 773, 880, 1768, 2302, 2470
FauI CCCGC 1 cut(s) 293
FbaI TGATCA 1 cut(s) 2194
FblI GTMKAC 2 cut(s) 954, 2070
Fnu4HI GCNGC 6 cut(s) 494, 765, 864, 1500, 1833, 2232
FriOI GRGCYC 1 cut(s) 837
Fsp4HI GCNGC 6 cut(s) 494, 765, 864, 1500, 1833, 2232
FspBI CTAG 5 cut(s) 59, 414, 812, 1146, 1836
GluI GCNGC 6 cut(s) 494, 765, 864, 1500, 1833, 2232
GsaI CCCAGC 1 cut(s) 561
GsuI CTGGAG 2 cut(s) 837, 1572
HaeIII GGCC 7 cut(s) 65, 1143, 1931, 1976, 2113, 2165, 2299
HapII CCGG 7 cut(s) 66, 92, 330, 362, 741, 751, 1452
HgaI GACGC 1 cut(s) 770
Hin1I GRCGYC 1 cut(s) 2067
HincII GTYRAC 2 cut(s) 517, 1206
HindII GTYRAC 2 cut(s) 517, 1206
HinfI GANTC 6 cut(s) 10, 699, 956, 1001, 1236, 1616
HpaII CCGG 7 cut(s) 66, 92, 330, 362, 741, 751, 1452
HphI GGTGA 4 cut(s) 97, 215, 1280, 1874
Hpy166II GTNNAC 6 cut(s) 517, 694, 880, 955, 1206, 2071
Hpy188III TCNNGA 8 cut(s) 499, 683, 854, 1191, 1393, 1441, 2021, 2027
Hpy8I GTNNAC 6 cut(s) 517, 694, 880, 955, 1206, 2071
Hpy99I CGWCG 4 cut(s) 247, 773, 1447, 2043
HpyAV CCTTC 3 cut(s) 1861, 2354, 2354
HpyCH4III ACNGT 3 cut(s) 116, 209, 829
HpyCH4IV ACGT 5 cut(s) 1008, 1077, 1986, 2047, 2067
HpyF10VI GCNNNNNNNGC 9 cut(s) 141, 476, 651, 1149, 1184, 1337, 2114, 2153, 2162
HpyF3I CTNAG 8 cut(s) 1045, 1115, 1384, 1729, 2055, 2138, 2157, 2469
HpySE526I ACGT 5 cut(s) 1008, 1077, 1986, 2047, 2067
Hsp92I GRCGYC 1 cut(s) 2067
KflI GGGWCCC 1 cut(s) 1755
Ksp22I TGATCA 1 cut(s) 2194
Kzo9I GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
LguI GCTCTTC 2 cut(s) 1889, 2127
LmnI GCTCC 2 cut(s) 871, 1070
Lsp1109I GCAGC 4 cut(s) 751, 850, 1844, 2243
LweI GCATC 9 cut(s) 466, 480, 556, 1196, 1210, 1370, 1510, 1556, 1647
MabI ACCWGGT 1 cut(s) 972
MaeI CTAG 5 cut(s) 59, 414, 812, 1146, 1836
MaeII ACGT 5 cut(s) 1008, 1077, 1986, 2047, 2067
MaeIII GTNAC 6 cut(s) 203, 209, 406, 926, 1009, 1763
MalI GATC 9 cut(s) 722, 1272, 1493, 1727, 2025, 2196, 2208, 2387, 2474
MbiI CCGCTC 2 cut(s) 496, 1020
MboI GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
MboII GAAGA 6 cut(s) 391, 746, 1237, 1787, 1906, 2144
MflI RGATCY 1 cut(s) 2023
MhlI GDGCHC 3 cut(s) 837, 1874, 1901
MlsI TGGCCA 2 cut(s) 1931, 1976
MluNI TGGCCA 2 cut(s) 1931, 1976
MlyI GAGTC 3 cut(s) 950, 1010, 1230
MmeI TCCRAC 2 cut(s) 414, 1305
Mox20I TGGCCA 2 cut(s) 1931, 1976
Mph1103I ATGCAT 4 cut(s) 571, 1571, 2280, 2450
MroXI GAANNNNTTC 3 cut(s) 9, 338, 2249
MscI TGGCCA 2 cut(s) 1931, 1976
MseI TTAA 1 cut(s) 1164
MslI CAYNNNNRTG 9 cut(s) 92, 743, 990, 1361, 1465, 1860, 1887, 1997, 2283
Msp20I TGGCCA 2 cut(s) 1931, 1976
MspI CCGG 7 cut(s) 66, 92, 330, 362, 741, 751, 1452
MspR9I CCNGG 8 cut(s) 154, 330, 331, 362, 974, 1452, 1453, 2153
MvaI CCWGG 3 cut(s) 154, 974, 2153
MvnI CGCG 1 cut(s) 429
MwoI GCNNNNNNNGC 9 cut(s) 141, 476, 651, 1149, 1184, 1337, 2114, 2153, 2162
NciI CCSGG 5 cut(s) 330, 331, 362, 1452, 1453
NdeII GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
NheI GCTAGC 2 cut(s) 413, 811
NmeAIII GCCGAG 1 cut(s) 2260
NmuCI GTSAC 3 cut(s) 203, 406, 1763
NsiI ATGCAT 4 cut(s) 571, 1571, 2280, 2450
NspI RCATGY 2 cut(s) 778, 2278
NspV TTCGAA 1 cut(s) 666
OliI CACNNNNGTG 2 cut(s) 92, 1997
PaeI GCATGC 1 cut(s) 2278
PagI TCATGA 1 cut(s) 498
PciI ACATGT 1 cut(s) 774
PciSI GCTCTTC 2 cut(s) 1889, 2127
PcsI WCGNNNNNNNCGW 1 cut(s) 768
PdmI GAANNNNTTC 3 cut(s) 9, 338, 2249
PfeI GAWTC 3 cut(s) 10, 699, 1616
PflFI GACNNNGTC 1 cut(s) 2046
PflMI CCANNNNNTGG 2 cut(s) 159, 1697
PkrI GCNGC 6 cut(s) 495, 766, 865, 1501, 1834, 2233
PleI GAGTC 3 cut(s) 950, 1009, 1230
PpsI GAGTC 3 cut(s) 950, 1009, 1230
PpuMI RGGWCCY 2 cut(s) 1414, 1755
PscI ACATGT 1 cut(s) 774
Psp124BI GAGCTC 1 cut(s) 837
Psp1406I AACGTT 1 cut(s) 1008
Psp5II RGGWCCY 2 cut(s) 1414, 1755
Psp6I CCWGG 3 cut(s) 152, 972, 2151
PspFI CCCAGC 1 cut(s) 557
PspGI CCWGG 3 cut(s) 152, 972, 2151
PspPI GGNCC 7 cut(s) 894, 1142, 1414, 1755, 2163, 2289, 2341
PspPPI RGGWCCY 2 cut(s) 1414, 1755
PsuI RGATCY 1 cut(s) 2023
PsyI GACNNNGTC 1 cut(s) 2046
RsaI GTAC 5 cut(s) 695, 749, 860, 1708, 1850
RsaNI GTAC 5 cut(s) 694, 748, 859, 1707, 1849
RseI CAYNNNNRTG 9 cut(s) 92, 743, 990, 1361, 1465, 1860, 1887, 1997, 2283
SacI GAGCTC 1 cut(s) 837
SapI GCTCTTC 2 cut(s) 1889, 2127
SaqAI TTAA 1 cut(s) 1164
SatI GCNGC 6 cut(s) 494, 765, 864, 1500, 1833, 2232
Sau3AI GATC 9 cut(s) 720, 1270, 1491, 1725, 2023, 2194, 2206, 2385, 2472
Sau96I GGNCC 7 cut(s) 894, 1142, 1414, 1755, 2163, 2289, 2341
SchI GAGTC 3 cut(s) 950, 1010, 1230
ScrFI CCNGG 8 cut(s) 154, 330, 331, 362, 974, 1452, 1453, 2153
SduI GDGCHC 3 cut(s) 837, 1874, 1901
SexAI ACCWGGT 1 cut(s) 972
SfaNI GCATC 9 cut(s) 466, 480, 556, 1196, 1210, 1370, 1510, 1556, 1647
SfcI CTRYAG 2 cut(s) 951, 1423
SfuI TTCGAA 1 cut(s) 666
SinI GGWCC 5 cut(s) 894, 1414, 1755, 2289, 2341
SmaI CCCGGG 2 cut(s) 331, 1453
SmiMI CAYNNNNRTG 9 cut(s) 92, 743, 990, 1361, 1465, 1860, 1887, 1997, 2283
SmlI CTYRAG 1 cut(s) 2327
SmoI CTYRAG 1 cut(s) 2327
SphI GCATGC 1 cut(s) 2278
SspMI CTAG 5 cut(s) 59, 414, 812, 1146, 1836
SstI GAGCTC 1 cut(s) 837
StyD4I CCNGG 8 cut(s) 152, 328, 329, 360, 972, 1450, 1451, 2151
StyI CCWWGG 2 cut(s) 1624, 1932
TaaI ACNGT 3 cut(s) 116, 209, 829
TaiI ACGT 5 cut(s) 1011, 1080, 1989, 2050, 2070
TaqI TCGA 5 cut(s) 111, 137, 666, 846, 1239
TaqII GACCGA 2 cut(s) 882, 1223
TatI WGTACW 1 cut(s) 1706
TauI GCSGC 2 cut(s) 496, 1502
TfiI GAWTC 3 cut(s) 10, 699, 1616
Tru1I TTAA 1 cut(s) 1164
Tru9I TTAA 1 cut(s) 1164
TscAI CASTG 8 cut(s) 286, 472, 652, 1488, 1522, 2124, 2383, 2395
TseFI GTSAC 3 cut(s) 203, 406, 1763
TseI GCWGC 4 cut(s) 764, 863, 1832, 2231
Tsp45I GTSAC 3 cut(s) 203, 406, 1763
TspDTI ATGAA 6 cut(s) 331, 357, 568, 651, 920, 2321
TspGWI ACGGA 4 cut(s) 231, 1455, 1751, 2199
TspMI CCCGGG 2 cut(s) 329, 1451
TspRI CASTG 8 cut(s) 286, 472, 652, 1488, 1522, 2124, 2383, 2395
Tth111I GACNNNGTC 1 cut(s) 2046
Van91I CCANNNNNTGG 2 cut(s) 159, 1697
VpaK11BI GGWCC 5 cut(s) 894, 1414, 1755, 2289, 2341
XapI RAATTY 4 cut(s) 302, 315, 506, 615
XceI RCATGY 2 cut(s) 778, 2278
XcmI CCANNNNNNNNNTGG 1 cut(s) 1797
XmaI CCCGGG 2 cut(s) 329, 1451
XmiI GTMKAC 2 cut(s) 954, 2070
XmnI GAANNNNTTC 3 cut(s) 9, 338, 2249
XspI CTAG 5 cut(s) 59, 414, 812, 1146, 1836
ZraI GACGTC 1 cut(s) 2068
Zsp2I ATGCAT 4 cut(s) 571, 1571, 2280, 2450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.