Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

76090697 .. 76093623

Gene Structure 2927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G048510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGAAGAACCTAACCAACAAATACCTTTGTACAGTAAATTCCATGAAACCAGTTCTTGGTCCTCTCTACCTTTCCTTGTTTCTGCACATCGTCGCCCAATTCGTGGCTGGTAATTCGCAACATATCTACACTCCGGTTGAAGATATCACCATTGCCTGTGGCAATTCCGGCACCCAAATCAATAAGTTTGATAACCGAACTTGGAGCGGAGATATCAACTCAGAATTTTGCCCCTTTGAACAAGACCAAGTTGGTAACAATACATCCCAAGTCAGAAAAGCACCATCATCGTCCTTCACAGGCAGAGTGCCGTACACCACCGCGAGGGTTTCTCACTCAACATTCACCTACAGATTTTCGTTAACTACGGGCCAGAAGTTCATACGCTTGTATTTCTACCATGCATCATATGCTGACTTTGACCGCTCCAAAGCCCTGTTTTCCGTTGAAGCAGGTGATTATACCCTTCTCCAAGATTTCAATGCTTCAGCCACTGTGGATGCTGCTGGGGTGGAGACGATATACAGAGAGTTCTGTTTGAACATTTATGATGGAGATCAGATTCTGAGCATTACATTCACTCCAAGCAAAGCCAAGCAGGCATATGCCTTTATCAATGGAATCGAAATTGTGTCCATGCCGACCTATCTTTACTACACTGCACCTCACAGCAATGCGGCTGATTATATAGGCGGGGGAGACAGATTTCCTATTCAGGAGAACACTGCTATGGAGATGGTTTACCGAATCAACATCGGTGGCAGCTCAGTCTCATCCAGTCAAGACACTGGAATGTACCGCAATTGGAATGGTGATGATGTGACCTACTTGGATGAATTAAGTAGAAGTCTAACCGTTTCACCGTCCAACCCAAGCATTCAACTCAAGTTTGCCAAAATACCTGAATACAGTGCGCCAAAAGAAGTTTATCAAACAGGCCGTTCAATCGACTCCAACAAGACAAACAACAAGAGCTACAATCTCACCTGGGAATTTCCTGTAGACTCTAACCATCCCCACCTGGTTAGGCTACATTTCTGTGAGCTTGAGCCCGAAATTACCAAGATAGGAGAGCGGACTTTTCTAATTTACATAGGGAATCAAGCCGCGGATACAGCAGACATAGTCGAATGGAGTGGTGGAAATGGGATACCAGTATACAGAGACTACGTGGTGGTCTTGTCTAACCCAGTAAGGCAGAAGAATGTAAGTCTTTCTATCACACTGCAAGCATTCCAAATGGATTGGATGATTAAATACAAGAATGCAATGTTGAATGGGCTCGAAATCCTGAAATTGATCGACTCAAAAGGCCCTCAAGCCGGAAGCAGCACCAACCCGAAGCTGACACCGCTAAGCCCAAGAACTTCAAAGAGTTCAAGTTCTGCGCTTGCCATCGTTGCTGGTGTAGTTTCTGCACAGCAAAGATGGAAAGTCAAGGACTCCGGCTCCAGCCACAGGACAATGAAGTTAACAATGACCCCCAGCTCATCTTCACCGTCATATTTGTGTCGCTACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAGAACTTCAATCATACTTTCATTATTGGTGTTGGAGGATTCGGCAATGTGTACAAAGGATGCATCGATAGTGGAGCCACTCTCGTTGCAATTAAACGACTGAAACCTGAGTCATCCCAGGGTGCCCATGAGTTCAAGACAGAAATTGAGTTGCTCTCCCAACTTCGTCATCGCCATTTGGTTTCACTTATTGGATACTGTACTGATAAAGGTGAGATGATCTTGGTATATGATTACATGGCCCGTGGATCCCTCCGTGATCATCTCTACCACACCAATAACTCCGCTCTTTCTTGGGAACAACGGCTTCAGATTTGTATTGGCACGGCTCAAGGGCTGCAGTACCTTCATGGAGGTGCCAAGGGAACCATCATTCACCGTGACGTGAAGAGCACAAACATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCAGATTTTGGGTTGTCAAAAATGGGGAACCCCAACATGTCCAAGACCCACATAAGCACGGTAGTGAAGGGCAGTTTCGGATATCTAGACCCAGAATACTACCGACGACAAAGATTAACTGAGAAGTCCGATGTGTACTCATTTGGTGTGGTTTTGTTTGAGGTACTATGTGCAAAGCCAGCTGTGATAAATACAGAGGAGATGAGGCAAATGAACTTATCTGAGTGGGCCAAAAGCTGTCATCACAAGGGGGAACTTGATCGAATCATCGACCCAAGCTTAACGGGTAACATTGCAACCGAGAGCTTGAATAAATTTGTTGATATTGCAATGAGCTGTGTGCATGAAAATGGTGTTGAGAGGCCGTCAATGGATGATGTTCTTAGGGGGCTTGAGCTTGCGTTGCAGATTCATCATAGCCAAGAGAGTGATATCAACTCCATTGAAAGGAAGGTAGAAACTGAAACAAGTAGTGGAGAACCAAGTTGTGTGACCAAAGATTCCATTACATGTATATCTGGGACAATCTTCTCTGAGATCAACCATCCAAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

846

Amino Acids

94.19

Weight (kDa)

6.93

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	52 - 431	1.4e-25	Malectin-like domain
Malectin	PF11721	247 - 401	2.1e-09	Malectin domain
Pkinase	PF00069	524 - 788	1.3e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	525 - 789	4.7e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	443
Acc36I	ACCTGC	1 cut(s)	443
AccB1I	GGYRCC	3 cut(s)	170, 1670, 1904
AccB7I	CCANNNNNTGG	2 cut(s)	56, 103
AccBSI	CCGCTC	4 cut(s)	207, 426, 1075, 1835
AccI	GTMKAC	2 cut(s)	1002, 1158
AccII	CGCG	2 cut(s)	323, 1109
AclWI	GGATC	2 cut(s)	1791, 1804
AcoI	YGGCCR	1 cut(s)	1971
AcsI	RAATTY	4 cut(s)	37, 224, 992, 2294
AcuI	CTGAAG	2 cut(s)	471, 1841
AfaI	GTAC	8 cut(s)	31, 314, 797, 1601, 1750, 1892, 2117, 2145
AfiI	CCNNNNNNNGG	6 cut(s)	56, 103, 324, 1322, 1458, 2427
AflIII	ACRYGT	2 cut(s)	2016, 2489
AjiI	CACGTC	1 cut(s)	1933
AjnI	CCWGG	3 cut(s)	986, 1020, 1665
AleI	CACNNNNGTG	1 cut(s)	2042
Alw21I	GWGCWC	1 cut(s)	1943
Alw26I	GTCTC	4 cut(s)	509, 693, 775, 1158
AlwI	GGATC	2 cut(s)	1791, 1804
AlwNI	CAGNNNCTG	2 cut(s)	494, 565
AoxI	GGCC	7 cut(s)	370, 937, 1312, 1788, 1971, 2208, 2342
ApeKI	GCWGC	4 cut(s)	503, 762, 1329, 1885
ApoI	RAATTY	4 cut(s)	37, 224, 992, 2294
AspLEI	GCGC	2 cut(s)	916, 1390
AspS9I	GGNCC	5 cut(s)	59, 370, 1313, 1789, 2208
AsuHPI	GGTGA	9 cut(s)	139, 337, 467, 824, 852, 976, 1488, 1772, 1916
AvaII	GGWCC	1 cut(s)	59
BaeGI	GKGCMC	1 cut(s)	1675
BalI	TGGCCA	1 cut(s)	1973
BamHI	GGATCC	1 cut(s)	1796
BanI	GGYRCC	3 cut(s)	170, 1670, 1904
BanII	GRGCYC	2 cut(s)	1053, 1284
Bbv12I	GWGCWC	1 cut(s)	1943
BbvI	GCAGC	4 cut(s)	490, 774, 1341, 1872
BccI	CCATC	8 cut(s)	292, 545, 730, 1020, 1403, 1422, 1925, 2532
BceAI	ACGGC	5 cut(s)	295, 924, 1868, 1890, 2329
BcgI	CGANNNNNNTGC	2 cut(s)	270, 304
BciT130I	CCWGG	3 cut(s)	988, 1022, 1667
BciVI	GTATCC	3 cut(s)	1105, 1143, 1736
BclI	TGATCA	1 cut(s)	1807
BcoDI	GTCTC	4 cut(s)	509, 693, 775, 1158
BfaI	CTAG	1 cut(s)	2066
BfmI	CTRYAG	3 cut(s)	349, 999, 1886
BfuAI	ACCTGC	1 cut(s)	443
BfuI	GTATCC	3 cut(s)	1105, 1143, 1736
BglI	GCCNNNNNGGC	1 cut(s)	599
BisI	GCNGC	7 cut(s)	504, 678, 763, 1107, 1330, 1542, 1886
BlpI	GCTNAGC	1 cut(s)	1355
BlsI	GCNGC	7 cut(s)	505, 679, 764, 1108, 1331, 1543, 1887
Bme1390I	CCNGG	3 cut(s)	988, 1022, 1667
Bme18I	GGWCC	1 cut(s)	59
BmgBI	CACGTC	1 cut(s)	1933
BmgT120I	GGNCC	5 cut(s)	59, 370, 1313, 1789, 2208
BmiI	GGNNCC	8 cut(s)	172, 1450, 1624, 1672, 1798, 1906, 1915, 2009
BmrFI	CCNGG	3 cut(s)	988, 1022, 1667
BmrI	ACTGGG	1 cut(s)	1184
BmsI	GCATC	4 cut(s)	413, 490, 1598, 1620
BmuI	ACTGGG	1 cut(s)	1184
BplI	GAGNNNNNCTC	6 cut(s)	316, 348, 1614, 1646, 1688, 1720
BpmI	CTGGAG	1 cut(s)	1435
Bpu1102I	GCTNAGC	1 cut(s)	1355
BpuEI	CTTGAG	5 cut(s)	869, 1067, 1302, 1863, 2393
Bsa29I	ATCGAT	1 cut(s)	1614
BsaAI	YACGTR	1 cut(s)	1171
BsaBI	GATNNNNATC	1 cut(s)	555
BsaJI	CCNNGG	7 cut(s)	987, 1107, 1665, 1666, 1792, 1908, 1974
BsaWI	WCCGGW	1 cut(s)	133
BsaXI	ACNNNNNCTCC	4 cut(s)	565, 595, 1433, 1463
Bsc4I	CCNNNNNNNGG	6 cut(s)	56, 103, 324, 1322, 1458, 2427
Bse1I	ACTGG	6 cut(s)	50, 777, 793, 1154, 1190, 1530
Bse3DI	GCAATG	6 cut(s)	150, 679, 1275, 1600, 2271, 2316
Bse8I	GATNNNNATC	1 cut(s)	555
BseBI	CCWGG	3 cut(s)	988, 1022, 1667
BseCI	ATCGAT	1 cut(s)	1614
BseDI	CCNNGG	7 cut(s)	987, 1107, 1665, 1666, 1792, 1908, 1974
BseJI	GATNNNNATC	1 cut(s)	555
BseLI	CCNNNNNNNGG	6 cut(s)	56, 103, 324, 1322, 1458, 2427
BseMI	GCAATG	6 cut(s)	150, 679, 1275, 1600, 2271, 2316
BseMII	CTCAG	7 cut(s)	234, 557, 780, 1647, 2091, 2193, 2505
BseNI	ACTGG	6 cut(s)	50, 777, 793, 1154, 1190, 1530
BseRI	GAGGAG	1 cut(s)	2192
BseSI	GKGCMC	1 cut(s)	1675
BseXI	GCAGC	4 cut(s)	490, 774, 1341, 1872
BseYI	CCCAGC	2 cut(s)	506, 1484
BsgI	GTGCAG	3 cut(s)	68, 645, 1401
Bsh1236I	CGCG	2 cut(s)	323, 1109
BshFI	GGCC	7 cut(s)	372, 939, 1314, 1790, 1973, 2210, 2344
BshNI	GGYRCC	3 cut(s)	170, 1670, 1904
BshVI	ATCGAT	1 cut(s)	1614
BsiHKAI	GWGCWC	1 cut(s)	1943
BsiSI	CCGG	4 cut(s)	134, 168, 1323, 1446
BslFI	GGGAC	1 cut(s)	2515
BslI	CCNNNNNNNGG	6 cut(s)	56, 103, 324, 1322, 1458, 2427
BsmAI	GTCTC	4 cut(s)	509, 693, 775, 1158
BsmBI	CGTCTC	1 cut(s)	509
BsmFI	GGGAC	1 cut(s)	2515
BsmI	GAATGC	3 cut(s)	876, 1232, 1270
BsnI	GGCC	7 cut(s)	372, 939, 1314, 1790, 1973, 2210, 2344
Bsp1286I	GDGCHC	4 cut(s)	1053, 1284, 1675, 1943
Bsp1407I	TGTACA	2 cut(s)	29, 1599
Bsp143I	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
Bsp1720I	GCTNAGC	1 cut(s)	1355
BspANI	GGCC	7 cut(s)	372, 939, 1314, 1790, 1973, 2210, 2344
BspCNI	CTCAG	7 cut(s)	233, 558, 779, 1648, 2092, 2194, 2506
BspDI	ATCGAT	1 cut(s)	1614
BspFNI	CGCG	2 cut(s)	323, 1109
BspLI	GGNNCC	8 cut(s)	172, 1450, 1624, 1672, 1798, 1906, 1915, 2009
BspMAI	CTGCAG	1 cut(s)	1890
BspMI	ACCTGC	1 cut(s)	443
BspPI	GGATC	2 cut(s)	1791, 1804
BspQI	GCTCTTC	1 cut(s)	1931
BspT107I	GGYRCC	3 cut(s)	170, 1670, 1904
BsrBI	CCGCTC	4 cut(s)	207, 426, 1075, 1835
BsrDI	GCAATG	6 cut(s)	150, 679, 1275, 1600, 2271, 2316
BsrGI	TGTACA	2 cut(s)	29, 1599
BsrI	ACTGG	6 cut(s)	50, 777, 793, 1154, 1190, 1530
BssECI	CCNNGG	7 cut(s)	987, 1107, 1665, 1666, 1792, 1908, 1974
BssMI	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
BssNAI	GTATAC	1 cut(s)	1159
BssT1I	CCWWGG	2 cut(s)	1908, 1974
Bst1107I	GTATAC	1 cut(s)	1159
Bst2UI	CCWGG	3 cut(s)	988, 1022, 1667
Bst4CI	ACNGT	9 cut(s)	34, 496, 856, 864, 911, 1500, 1748, 1928, 2041
Bst6I	CTCTTC	1 cut(s)	1931
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstAUI	TGTACA	2 cut(s)	29, 1599
BstBAI	YACGTR	1 cut(s)	1171
BstC8I	GCNNGC	5 cut(s)	600, 1230, 1392, 2160, 2379
BstDEI	CTNAG	9 cut(s)	220, 566, 766, 1355, 1656, 2100, 2202, 2363, 2514
BstDSI	CCRYGG	2 cut(s)	1107, 1792
BstFNI	CGCG	2 cut(s)	323, 1109
BstHHI	GCGC	2 cut(s)	916, 1390
BstKTI	GATC	8 cut(s)	559, 1302, 1536, 1770, 1799, 1810, 2242, 2520
BstMAI	GTCTC	4 cut(s)	509, 693, 775, 1158
BstMBI	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
BstMWI	GCNNNNNNNGC	8 cut(s)	168, 410, 599, 1115, 1351, 1400, 2159, 2383
BstNI	CCWGG	3 cut(s)	988, 1022, 1667
BstNSI	RCATGY	2 cut(s)	2020, 2493
BstSCI	CCNGG	3 cut(s)	986, 1020, 1665
BstSFI	CTRYAG	3 cut(s)	349, 999, 1886
BstSLI	GKGCMC	1 cut(s)	1675
BstUI	CGCG	2 cut(s)	323, 1109
BstV1I	GCAGC	4 cut(s)	490, 774, 1341, 1872
BstX2I	RGATCY	1 cut(s)	1796
BstXI	CCANNNNNNTGG	1 cut(s)	2531
BstYI	RGATCY	1 cut(s)	1796
BstZ17I	GTATAC	1 cut(s)	1159
Bsu15I	ATCGAT	1 cut(s)	1614
BsuI	GTATCC	3 cut(s)	1105, 1143, 1736
BsuRI	GGCC	7 cut(s)	372, 939, 1314, 1790, 1973, 2210, 2344
BsuTUI	ATCGAT	1 cut(s)	1614
BtgI	CCRYGG	2 cut(s)	1107, 1792
BtgZI	GCGATG	1 cut(s)	1703
BtrI	CACGTC	1 cut(s)	1933
BtsI	GCAGTG	3 cut(s)	657, 723, 1223
BtsIMutI	CAGTG	7 cut(s)	492, 657, 723, 786, 916, 1223, 1523
BveI	ACCTGC	1 cut(s)	443
Cac8I	GCNNGC	5 cut(s)	600, 1230, 1392, 2160, 2379
CaiI	CAGNNNCTG	2 cut(s)	494, 565
CfoI	GCGC	2 cut(s)	916, 1390
Cfr13I	GGNCC	5 cut(s)	59, 370, 1313, 1789, 2208
Cfr42I	CCGCGG	1 cut(s)	1110
ClaI	ATCGAT	1 cut(s)	1614
CsiI	ACCWGGT	1 cut(s)	1020
Csp6I	GTAC	8 cut(s)	30, 313, 796, 1600, 1749, 1891, 2116, 2144
CspCI	CAANNNNNGTGG	4 cut(s)	739, 774, 1615, 1650
CviAII	CATG	9 cut(s)	43, 401, 637, 1676, 1786, 1898, 2017, 2324, 2490
CviQI	GTAC	8 cut(s)	30, 313, 796, 1600, 1749, 1891, 2116, 2144
DdeI	CTNAG	9 cut(s)	220, 566, 766, 1355, 1656, 2100, 2202, 2363, 2514
DpnI	GATC	8 cut(s)	558, 1301, 1535, 1769, 1798, 1809, 2241, 2519
DpnII	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
EaeI	YGGCCR	1 cut(s)	1971
Eam1104I	CTCTTC	1 cut(s)	1931
EarI	CTCTTC	1 cut(s)	1931
Eco130I	CCWWGG	2 cut(s)	1908, 1974
Eco24I	GRGCYC	2 cut(s)	1053, 1284
Eco32I	GATATC	4 cut(s)	145, 214, 2063, 2413
Eco47I	GGWCC	1 cut(s)	59
Eco57I	CTGAAG	2 cut(s)	471, 1841
EcoO109I	RGGNCCY	1 cut(s)	1313
EcoRII	CCWGG	3 cut(s)	986, 1020, 1665
EcoRV	GATATC	4 cut(s)	145, 214, 2063, 2413
EcoT14I	CCWWGG	2 cut(s)	1908, 1974
EcoT22I	ATGCAT	2 cut(s)	406, 1613
EcoT38I	GRGCYC	2 cut(s)	1053, 1284
ErhI	CCWWGG	2 cut(s)	1908, 1974
Esp3I	CGTCTC	1 cut(s)	509
FaeI	CATG	9 cut(s)	46, 404, 640, 1679, 1789, 1901, 2020, 2327, 2493
FaqI	GGGAC	1 cut(s)	2515
FatI	CATG	9 cut(s)	42, 400, 636, 1675, 1785, 1897, 2016, 2323, 2489
FauI	CCCGC	1 cut(s)	686
FauNDI	CATATG	2 cut(s)	409, 604
FbaI	TGATCA	1 cut(s)	1807
FblI	GTMKAC	2 cut(s)	1002, 1158
Fnu4HI	GCNGC	7 cut(s)	504, 678, 763, 1107, 1330, 1542, 1886
FriOI	GRGCYC	2 cut(s)	1053, 1284
Fsp4HI	GCNGC	7 cut(s)	504, 678, 763, 1107, 1330, 1542, 1886
FspBI	CTAG	1 cut(s)	2066
GlaI	GCGC	2 cut(s)	915, 1389
GluI	GCNGC	7 cut(s)	504, 678, 763, 1107, 1330, 1542, 1886
GsaI	CCCAGC	2 cut(s)	510, 1488
GsuI	CTGGAG	1 cut(s)	1435
HaeIII	GGCC	7 cut(s)	372, 939, 1314, 1790, 1973, 2210, 2344
HapII	CCGG	4 cut(s)	134, 168, 1323, 1446
HhaI	GCGC	2 cut(s)	916, 1390
Hin1II	CATG	9 cut(s)	46, 404, 640, 1679, 1789, 1901, 2020, 2327, 2493
Hin6I	GCGC	2 cut(s)	914, 1388
HinP1I	GCGC	2 cut(s)	914, 1388
HincII	GTYRAC	2 cut(s)	363, 1473
HindII	GTYRAC	2 cut(s)	363, 1473
HindIII	AAGCTT	1 cut(s)	2257
HpaI	GTTAAC	2 cut(s)	363, 1473
HpaII	CCGG	4 cut(s)	134, 168, 1323, 1446
HphI	GGTGA	9 cut(s)	139, 337, 467, 824, 852, 976, 1488, 1772, 1916
Hpy166II	GTNNAC	8 cut(s)	315, 363, 742, 1003, 1159, 1473, 1600, 2116
Hpy188III	TCNNGA	5 cut(s)	716, 782, 1291, 1684, 2066
Hpy8I	GTNNAC	8 cut(s)	315, 363, 742, 1003, 1159, 1473, 1600, 2116
Hpy99I	CGWCG	2 cut(s)	95, 2088
HpyAV	CCTTC	5 cut(s)	304, 476, 1904, 2041, 2425
HpyCH4III	ACNGT	9 cut(s)	34, 496, 856, 864, 911, 1500, 1748, 1928, 2041
HpyCH4IV	ACGT	2 cut(s)	1170, 1932
HpyF10VI	GCNNNNNNNGC	8 cut(s)	168, 410, 599, 1115, 1351, 1400, 2159, 2383
HpyF3I	CTNAG	9 cut(s)	220, 566, 766, 1355, 1656, 2100, 2202, 2363, 2514
HpySE526I	ACGT	2 cut(s)	1170, 1932
Hsp92II	CATG	9 cut(s)	46, 404, 640, 1679, 1789, 1901, 2020, 2327, 2493
HspAI	GCGC	2 cut(s)	914, 1388
Ksp22I	TGATCA	1 cut(s)	1807
KspAI	GTTAAC	2 cut(s)	363, 1473
KspI	CCGCGG	1 cut(s)	1110
Kzo9I	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
LguI	GCTCTTC	1 cut(s)	1931
LmnI	GCTCC	4 cut(s)	204, 431, 1454, 1622
Lsp1109I	GCAGC	4 cut(s)	490, 774, 1341, 1872
LweI	GCATC	4 cut(s)	413, 490, 1598, 1620
MabI	ACCWGGT	1 cut(s)	1020
MaeI	CTAG	1 cut(s)	2066
MaeII	ACGT	2 cut(s)	1170, 1932
MaeIII	GTNAC	5 cut(s)	254, 820, 1928, 2267, 2470
MalI	GATC	8 cut(s)	558, 1301, 1535, 1769, 1798, 1809, 2241, 2519
MbiI	CCGCTC	4 cut(s)	207, 426, 1075, 1835
MboI	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
MboII	GAAGA	6 cut(s)	16, 152, 1213, 1485, 1948, 2500
MfeI	CAATTG	1 cut(s)	802
MflI	RGATCY	1 cut(s)	1796
MhlI	GDGCHC	4 cut(s)	1053, 1284, 1675, 1943
MlsI	TGGCCA	1 cut(s)	1973
MluNI	TGGCCA	1 cut(s)	1973
MlyI	GAGTC	5 cut(s)	944, 998, 1298, 1436, 1667
MmeI	TCCRAC	3 cut(s)	891, 978, 1561
Mox20I	TGGCCA	1 cut(s)	1973
Mph1103I	ATGCAT	2 cut(s)	406, 1613
MscI	TGGCCA	1 cut(s)	1973
MseI	TTAA	7 cut(s)	362, 839, 1254, 1472, 1641, 2096, 2261
MslI	CAYNNNNRTG	9 cut(s)	672, 728, 791, 1038, 1507, 1902, 2042, 2328, 2529
Msp20I	TGGCCA	1 cut(s)	1973
MspA1I	CMGCKG	2 cut(s)	1109, 2162
MspI	CCGG	4 cut(s)	134, 168, 1323, 1446
MspR9I	CCNGG	3 cut(s)	988, 1022, 1667
MunI	CAATTG	1 cut(s)	802
Mva1269I	GAATGC	3 cut(s)	876, 1232, 1270
MvaI	CCWGG	3 cut(s)	988, 1022, 1667
MvnI	CGCG	2 cut(s)	323, 1109
MwoI	GCNNNNNNNGC	8 cut(s)	168, 410, 599, 1115, 1351, 1400, 2159, 2383
NdeI	CATATG	2 cut(s)	409, 604
NdeII	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
NlaIII	CATG	9 cut(s)	46, 404, 640, 1679, 1789, 1901, 2020, 2327, 2493
NlaIV	GGNNCC	8 cut(s)	172, 1450, 1624, 1672, 1798, 1906, 1915, 2009
NmuCI	GTSAC	3 cut(s)	820, 1928, 2470
NsiI	ATGCAT	2 cut(s)	406, 1613
NspI	RCATGY	2 cut(s)	2020, 2493
OliI	CACNNNNGTG	1 cut(s)	2042
PaqCI	CACCTGC	1 cut(s)	443
PasI	CCCWGGG	1 cut(s)	1666
PciI	ACATGT	2 cut(s)	2016, 2489
PciSI	GCTCTTC	1 cut(s)	1931
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	3 cut(s)	876, 1232, 1270
PfeI	GAWTC	8 cut(s)	562, 621, 747, 1099, 1587, 2244, 2389, 2480
PflFI	GACNNNGTC	1 cut(s)	1124
PflMI	CCANNNNNTGG	2 cut(s)	56, 103
PkrI	GCNGC	7 cut(s)	505, 679, 764, 1108, 1331, 1543, 1887
PleI	GAGTC	5 cut(s)	944, 998, 1298, 1436, 1666
PpsI	GAGTC	5 cut(s)	944, 998, 1298, 1436, 1666
Ppu21I	YACGTR	1 cut(s)	1171
PscI	ACATGT	2 cut(s)	2016, 2489
Psp6I	CCWGG	3 cut(s)	986, 1020, 1665
PspFI	CCCAGC	2 cut(s)	506, 1484
PspGI	CCWGG	3 cut(s)	986, 1020, 1665
PspN4I	GGNNCC	8 cut(s)	172, 1450, 1624, 1672, 1798, 1906, 1915, 2009
PspPI	GGNCC	5 cut(s)	59, 370, 1313, 1789, 2208
PstI	CTGCAG	1 cut(s)	1890
PstNI	CAGNNNCTG	2 cut(s)	494, 565
PsuI	RGATCY	1 cut(s)	1796
PsyI	GACNNNGTC	1 cut(s)	1124
PvuII	CAGCTG	1 cut(s)	2162
RsaI	GTAC	8 cut(s)	31, 314, 797, 1601, 1750, 1892, 2117, 2145
RsaNI	GTAC	8 cut(s)	30, 313, 796, 1600, 1749, 1891, 2116, 2144
RseI	CAYNNNNRTG	9 cut(s)	672, 728, 791, 1038, 1507, 1902, 2042, 2328, 2529
SacII	CCGCGG	1 cut(s)	1110
SapI	GCTCTTC	1 cut(s)	1931
SaqAI	TTAA	7 cut(s)	362, 839, 1254, 1472, 1641, 2096, 2261
SatI	GCNGC	7 cut(s)	504, 678, 763, 1107, 1330, 1542, 1886
Sau3AI	GATC	8 cut(s)	556, 1299, 1533, 1767, 1796, 1807, 2239, 2517
Sau96I	GGNCC	5 cut(s)	59, 370, 1313, 1789, 2208
SchI	GAGTC	5 cut(s)	944, 998, 1298, 1436, 1667
ScrFI	CCNGG	3 cut(s)	988, 1022, 1667
SduI	GDGCHC	4 cut(s)	1053, 1284, 1675, 1943
SexAI	ACCWGGT	1 cut(s)	1020
SfaNI	GCATC	4 cut(s)	413, 490, 1598, 1620
SfcI	CTRYAG	3 cut(s)	349, 999, 1886
Sfr303I	CCGCGG	1 cut(s)	1110
SgrBI	CCGCGG	1 cut(s)	1110
SinI	GGWCC	1 cut(s)	59
SmiMI	CAYNNNNRTG	9 cut(s)	672, 728, 791, 1038, 1507, 1902, 2042, 2328, 2529
SmlI	CTYRAG	5 cut(s)	884, 1046, 1317, 1878, 2372
SmoI	CTYRAG	5 cut(s)	884, 1046, 1317, 1878, 2372
SspMI	CTAG	1 cut(s)	2066
StyD4I	CCNGG	3 cut(s)	986, 1020, 1665
StyI	CCWWGG	2 cut(s)	1908, 1974
TaaI	ACNGT	9 cut(s)	34, 496, 856, 864, 911, 1500, 1748, 1928, 2041
TaiI	ACGT	2 cut(s)	1173, 1935
TaqI	TCGA	8 cut(s)	624, 948, 1128, 1284, 1302, 1614, 2242, 2250
TatI	WGTACW	4 cut(s)	29, 1599, 1748, 2115
TauI	GCSGC	3 cut(s)	680, 1109, 1544
TfiI	GAWTC	8 cut(s)	562, 621, 747, 1099, 1587, 2244, 2389, 2480
Tru1I	TTAA	7 cut(s)	362, 839, 1254, 1472, 1641, 2096, 2261
Tru9I	TTAA	7 cut(s)	362, 839, 1254, 1472, 1641, 2096, 2261
TscAI	CASTG	7 cut(s)	499, 664, 730, 793, 916, 1230, 1530
TseFI	GTSAC	3 cut(s)	820, 1928, 2470
TseI	GCWGC	4 cut(s)	503, 762, 1329, 1885
Tsp45I	GTSAC	3 cut(s)	820, 1928, 2470
TspGWI	ACGGA	2 cut(s)	433, 1793
TspRI	CASTG	7 cut(s)	499, 664, 730, 793, 916, 1230, 1530
Tth111I	GACNNNGTC	1 cut(s)	1124
Van91I	CCANNNNNTGG	2 cut(s)	56, 103
VpaK11BI	GGWCC	1 cut(s)	59
XapI	RAATTY	4 cut(s)	37, 224, 992, 2294
XbaI	TCTAGA	1 cut(s)	2065
XceI	RCATGY	2 cut(s)	2020, 2493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	104
XmiI	GTMKAC	2 cut(s)	1002, 1158
XspI	CTAG	1 cut(s)	2066
Zsp2I	ATGCAT	2 cut(s)	406, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.