Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

15730613 .. 15732499

Gene Structure 1887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00345350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGTGGACGCCAACGCAGGCTCATTTGCTATAGGAAACAAAACAGCTCTGGAGATGGTGTACCGACTCAACGTCGGCGGAAGCTCGATCTGGCCGAACGCAGACACCGGCATGTACCGGACTTGGGAAACTGCCGACGATATTTATTTGGATAATGTAAGTAAAAAACTCAGCGTGCTACAAAACGATACAATCGAGCTCAACTTCGTCGAAGTTCCAGAATACTCTGCTCCAAAACCAGTTTACACAACAGGTCGGTCAACGGTGATGACCGAAGCCACCGATGAGAGCTATGGCCTCACATGGGTATTTCCCTTAGATCCCAACTTTTATTACCTGGTGAGACTCCATTTCTGTGAGATTCGAAACAGAAAGCGATGGTTTCAAATCTACTTGGCCAATCAAACCGCAGATGTCATCCGATGGAGTGGAGGAAACGGGAATCCAGTTTACAAAGACTACGTTGTGGGCATGTTCATGCCTCCGGTCGGAAGCCAGAAGAAAGTTGACTTATTTCTCGTGCTTTCACCGCTCCCGATTGGGTATGCTGACAGCAATGCCACGTTGAACGGGCTGGAAATCTTCAAGCTCAGTGACTCGAGTGGGAATTTCGCCGGACCCAACCCCAATCCACCACAACTGCGGCCCCCGTCACAAAAACGAGATGATACTGAAAACAAGAAGTCGACTCCCATGGTTGCTATCGTTGCAGGTGTAGTTGCCGGCTTCATTACGCTCTCTGTTCTCATATTCTTGGTTTCGAGGCGACGATGGAAATTAAAGGACTCTGGGTCTGGCTCCAGGCAAACAATGACAAAGCCAACAATGAACCCGGGGCAATTTATGCCTACTAATTTGTGTCGTTACTTTCCGCTGGAAGAGATCACAGCCGCCACCAAAAACTTCAATGATACATTCATTATTGGAGCTGGAGGATTTGGCAACGTATACAAAGGATGCACTGATGGTGGAGCCATTCCAGTTGCCATCAAACGACTGAAACCAGGGTCATCGCAGGGTGCTCACGAGTTTAAGACCGAAATTGAGATGCTCTCCCAACTCCGTCATCGCCATTTGGTTTCATTAATTGGATATTGTGTTGATGAGGGCGAGATGATCTTAGTGTATGATTACATGGCACACGGAACCCTCCGTGACCATCTCTACCGCACCGACAACCCGCCTCTTCCCTGGGAGAAGCGACTTCAGATTTGCATAGGCACCGCTCGAGGGTTGCAATACCTTCATAATGGTGCAGAGGGCACCATCATTCACCGAGATGTGAAGAGCACAAACATATTATTGGATGACAAATGGGTGGCCAAAGTTTCAGATTTTGGGCTGTCTAAGGACACGACTAACATGTCCAAAACCCACATCAGCACAATGGTGAAAGGCAGTTTTGGGTATCTGGACCCAGAATACTACCGCCGACAACGTCTGACTGAGAAGTCAGACGTGTACTCACTTGGTGTAGTGTTGTTTGAGGTATTGTGTGCAAGGCCAGCAGTGATTCAGACAGAAGATCTGAAGCAAGTGAACCTGGCTGAGTGGGCCAAGATCTGTCATCAGAATGGGGACCTTGATCAAATCATTGATCCAAGTTTGAGAGGTAAGATTTCAGCCGACTGCCTGAATAAGTTCACTGACGTAGCTATCAGTTGCACGCATGATGATGGGACAAAACGACCGTCCATGAATGATGTTGTAAAGGAGCTTGAGCTTGCATTGCTGCTTCAGCAGAGTGCAGAAGGGAATACCAAATGCACTGATAGGAATGTTGAAACTGAAACAAGCAGTAGTGACCACAGTTGTGCCACCAACGATTCCGTCAAATGTATATCTGTGACAATCTTCTCTGAGATTAACAACCCAAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

628

Amino Acids

69.91

Weight (kDa)

6.34

Isoelectric Point (pI)

39.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	13 - 196	5.6e-12	Malectin-like domain
Pkinase	PF00069	307 - 571	5.9e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	308 - 573	5.1e-51	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	701
AasI	GACNNNNNNGTC	2 cut(s)	1363, 1450
Acc36I	ACCTGC	1 cut(s)	701
AccB1I	GGYRCC	2 cut(s)	1220, 1262
AccBSI	CCGCTC	2 cut(s)	532, 1226
AccI	GTMKAC	2 cut(s)	686, 948
AclWI	GGATC	2 cut(s)	314, 1592
AcoI	YGGCCR	3 cut(s)	92, 396, 1320
AcsI	RAATTY	1 cut(s)	607
AcuI	CTGAAG	3 cut(s)	1190, 1550, 1721
AcyI	GRCGYC	1 cut(s)	9
AdeI	CACNNNGTG	1 cut(s)	1472
AfaI	GTAC	3 cut(s)	62, 116, 1463
AfiI	CCNNNNNNNGG	4 cut(s)	124, 304, 488, 1230
AflIII	ACRYGT	2 cut(s)	1362, 1458
AgsI	TTSAA	5 cut(s)	386, 568, 586, 907, 1784
AhdI	GACNNNNNGTC	2 cut(s)	71, 790
AjiI	CACGTC	1 cut(s)	1459
AjnI	CCWGG	5 cut(s)	336, 800, 1003, 1190, 1542
AleI	CACNNNNGTG	2 cut(s)	1388, 1812
AluBI	AGCT	9 cut(s)	47, 84, 199, 291, 589, 929, 1655, 1717, 1723
AluI	AGCT	9 cut(s)	47, 84, 199, 291, 589, 929, 1655, 1717, 1723
Alw21I	GWGCWC	3 cut(s)	201, 1024, 1292
Alw26I	GTCTC	1 cut(s)	337
AlwI	GGATC	2 cut(s)	314, 1592
Ama87I	CYCGRG	3 cut(s)	598, 832, 1227
AoxI	GGCC	7 cut(s)	92, 295, 396, 644, 1320, 1502, 1554
ApeKI	GCWGC	1 cut(s)	1732
ApoI	RAATTY	1 cut(s)	607
ArsI	GACNNNNNNTTYG	4 cut(s)	1194, 1226, 1676, 1708
AseI	ATTAAT	1 cut(s)	1085
Asp700I	GAANNNNTTC	1 cut(s)	1640
AspS9I	GGNCC	5 cut(s)	617, 645, 1414, 1554, 1579
AsuC2I	CCSGG	2 cut(s)	833, 834
AsuHPI	GGTGA	5 cut(s)	277, 352, 519, 1265, 1402
AsuII	TTCGAA	1 cut(s)	364
AvaI	CYCGRG	3 cut(s)	598, 832, 1227
AvaII	GGWCC	3 cut(s)	617, 1414, 1579
BaeGI	GKGCMC	1 cut(s)	1265
BalI	TGGCCA	2 cut(s)	398, 1322
BanI	GGYRCC	2 cut(s)	1220, 1262
BanII	GRGCYC	1 cut(s)	201
BauI	CACGAG	2 cut(s)	518, 1025
Bbv12I	GWGCWC	3 cut(s)	201, 1024, 1292
BbvI	GCAGC	1 cut(s)	1719
BccI	CCATC	9 cut(s)	49, 372, 417, 765, 959, 995, 1167, 1274, 1670
BciT130I	CCWGG	5 cut(s)	338, 802, 1005, 1192, 1544
BclI	TGATCA	1 cut(s)	1585
BcnI	CCSGG	2 cut(s)	833, 834
BcoDI	GTCTC	1 cut(s)	337
BfmI	CTRYAG	1 cut(s)	30
BfuAI	ACCTGC	1 cut(s)	701
BglII	AGATCT	2 cut(s)	1525, 1560
BisI	GCNGC	3 cut(s)	644, 891, 1733
BlsI	GCNGC	3 cut(s)	645, 892, 1734
Bme1390I	CCNGG	7 cut(s)	338, 802, 833, 834, 1005, 1192, 1544
Bme18I	GGWCC	3 cut(s)	617, 1414, 1579
BmeRI	GACNNNNNGTC	2 cut(s)	71, 790
BmeT110I	CYCGRG	3 cut(s)	598, 832, 1227
BmgBI	CACGTC	1 cut(s)	1459
BmgT120I	GGNCC	5 cut(s)	617, 645, 1414, 1554, 1579
BmiI	GGNNCC	9 cut(s)	619, 647, 799, 973, 1147, 1222, 1264, 1416, 1580
BmrFI	CCNGG	7 cut(s)	338, 802, 833, 834, 1005, 1192, 1544
BmsI	GCATC	2 cut(s)	947, 1038
BplI	GAGNNNNNCTC	2 cut(s)	1037, 1069
BpmI	CTGGAG	3 cut(s)	71, 784, 951
Bpu14I	TTCGAA	1 cut(s)	364
BpuEI	CTTGAG	1 cut(s)	1739
BpuMI	CCSGG	2 cut(s)	833, 834
BsaHI	GRCGYC	1 cut(s)	9
BsaJI	CCNNGG	6 cut(s)	693, 832, 833, 1004, 1190, 1191
BsaWI	WCCGGW	2 cut(s)	117, 484
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	4 cut(s)	124, 304, 488, 1230
Bse118I	RCCGGY	2 cut(s)	107, 722
Bse1I	ACTGG	3 cut(s)	239, 446, 980
Bse3DI	GCAATG	2 cut(s)	562, 1727
BseBI	CCWGG	5 cut(s)	338, 802, 1005, 1192, 1544
BseDI	CCNNGG	6 cut(s)	693, 832, 833, 1004, 1190, 1191
BseGI	GGATG	3 cut(s)	417, 962, 1312
BseLI	CCNNNNNNNGG	4 cut(s)	124, 304, 488, 1230
BseMI	GCAATG	2 cut(s)	562, 1727
BseMII	CTCAG	5 cut(s)	184, 604, 1437, 1539, 1851
BseNI	ACTGG	3 cut(s)	239, 446, 980
BseSI	GKGCMC	1 cut(s)	1265
BseXI	GCAGC	1 cut(s)	1719
BsgI	GTGCAG	2 cut(s)	1275, 1767
Bsh1285I	CGRYCG	2 cut(s)	489, 1691
BshFI	GGCC	7 cut(s)	94, 297, 398, 646, 1322, 1504, 1556
BshNI	GGYRCC	2 cut(s)	1220, 1262
BsiEI	CGRYCG	2 cut(s)	489, 1691
BsiHKAI	GWGCWC	3 cut(s)	201, 1024, 1292
BsiHKCI	CYCGRG	3 cut(s)	598, 832, 1227
BsiSI	CCGG	6 cut(s)	108, 118, 485, 615, 723, 833
BslFI	GGGAC	2 cut(s)	1592, 1693
BslI	CCNNNNNNNGG	4 cut(s)	124, 304, 488, 1230
BsmAI	GTCTC	1 cut(s)	337
BsmFI	GGGAC	2 cut(s)	1592, 1693
BsnI	GGCC	7 cut(s)	94, 297, 398, 646, 1322, 1504, 1556
BsoBI	CYCGRG	3 cut(s)	598, 832, 1227
Bsp119I	TTCGAA	1 cut(s)	364
Bsp1286I	GDGCHC	4 cut(s)	201, 1024, 1265, 1292
Bsp143I	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
Bsp19I	CCATGG	1 cut(s)	693
BspANI	GGCC	7 cut(s)	94, 297, 398, 646, 1322, 1504, 1556
BspCNI	CTCAG	5 cut(s)	183, 603, 1438, 1540, 1852
BspLI	GGNNCC	9 cut(s)	619, 647, 799, 973, 1147, 1222, 1264, 1416, 1580
BspMI	ACCTGC	1 cut(s)	701
BspPI	GGATC	2 cut(s)	314, 1592
BspQI	GCTCTTC	1 cut(s)	1280
BspT104I	TTCGAA	1 cut(s)	364
BspT107I	GGYRCC	2 cut(s)	1220, 1262
BsrBI	CCGCTC	2 cut(s)	532, 1226
BsrDI	GCAATG	2 cut(s)	562, 1727
BsrFI	RCCGGY	2 cut(s)	107, 722
BsrI	ACTGG	3 cut(s)	239, 446, 980
BssAI	RCCGGY	2 cut(s)	107, 722
BssECI	CCNNGG	6 cut(s)	693, 832, 833, 1004, 1190, 1191
BssMI	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
BssNAI	GTATAC	1 cut(s)	949
BssNI	GRCGYC	1 cut(s)	9
BssSI	CACGAG	2 cut(s)	518, 1025
BssT1I	CCWWGG	1 cut(s)	693
Bst1107I	GTATAC	1 cut(s)	949
Bst2BI	CACGAG	2 cut(s)	518, 1025
Bst2UI	CCWGG	5 cut(s)	338, 802, 1005, 1192, 1544
Bst4CI	ACNGT	3 cut(s)	265, 1692, 1811
Bst6I	CTCTTC	3 cut(s)	873, 1191, 1280
BstACI	GRCGYC	1 cut(s)	9
BstAPI	GCANNNNNTGC	1 cut(s)	844
BstBI	TTCGAA	1 cut(s)	364
BstC8I	GCNNGC	6 cut(s)	19, 176, 724, 1506, 1667, 1725
BstDEI	CTNAG	8 cut(s)	170, 316, 590, 1120, 1347, 1446, 1548, 1860
BstDSI	CCRYGG	1 cut(s)	693
BstF5I	GGATG	3 cut(s)	417, 962, 1312
BstKTI	GATC	8 cut(s)	90, 322, 885, 1119, 1528, 1563, 1588, 1600
BstMAI	GTCTC	1 cut(s)	337
BstMBI	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
BstMCI	CGRYCG	2 cut(s)	489, 1691
BstMWI	GCNNNNNNNGC	7 cut(s)	529, 707, 844, 1505, 1553, 1729, 1738
BstNI	CCWGG	5 cut(s)	338, 802, 1005, 1192, 1544
BstNSI	RCATGY	3 cut(s)	115, 475, 1366
BstSCI	CCNGG	7 cut(s)	336, 800, 831, 832, 1003, 1190, 1542
BstSFI	CTRYAG	1 cut(s)	30
BstSLI	GKGCMC	1 cut(s)	1265
BstV1I	GCAGC	1 cut(s)	1719
BstX2I	RGATCY	3 cut(s)	319, 1525, 1560
BstYI	RGATCY	3 cut(s)	319, 1525, 1560
BstZ17I	GTATAC	1 cut(s)	949
BsuRI	GGCC	7 cut(s)	94, 297, 398, 646, 1322, 1504, 1556
BtgI	CCRYGG	1 cut(s)	693
BtgZI	GCGATG	3 cut(s)	391, 996, 1052
BtrI	CACGTC	1 cut(s)	1459
BtsCI	GGATG	3 cut(s)	417, 962, 1312
BtsI	GCAGTG	1 cut(s)	1515
BtsIMutI	CAGTG	5 cut(s)	598, 960, 1515, 1644, 1767
BveI	ACCTGC	1 cut(s)	701
Cac8I	GCNNGC	6 cut(s)	19, 176, 724, 1506, 1667, 1725
Cfr10I	RCCGGY	2 cut(s)	107, 722
Cfr13I	GGNCC	5 cut(s)	617, 645, 1414, 1554, 1579
Cfr9I	CCCGGG	1 cut(s)	832
CseI	GACGC	1 cut(s)	17
CsiI	ACCWGGT	1 cut(s)	336
Csp6I	GTAC	3 cut(s)	61, 115, 1462
CspCI	CAANNNNNGTGG	1 cut(s)	1858
CviAII	CATG	9 cut(s)	112, 303, 472, 478, 694, 1135, 1363, 1670, 1696
CviQI	GTAC	3 cut(s)	61, 115, 1462
DdeI	CTNAG	8 cut(s)	170, 316, 590, 1120, 1347, 1446, 1548, 1860
DpnI	GATC	8 cut(s)	89, 321, 884, 1118, 1527, 1562, 1587, 1599
DpnII	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
DraIII	CACNNNGTG	1 cut(s)	1472
DrdI	GACNNNNNNGTC	2 cut(s)	1363, 1450
DriI	GACNNNNNGTC	2 cut(s)	71, 790
DseDI	GACNNNNNNGTC	2 cut(s)	1363, 1450
EaeI	YGGCCR	3 cut(s)	92, 396, 1320
Eam1104I	CTCTTC	3 cut(s)	873, 1191, 1280
Eam1105I	GACNNNNNGTC	2 cut(s)	71, 790
EarI	CTCTTC	3 cut(s)	873, 1191, 1280
EciI	GGCGGA	1 cut(s)	93
Ecl136II	GAGCTC	1 cut(s)	199
Eco130I	CCWWGG	1 cut(s)	693
Eco24I	GRGCYC	1 cut(s)	201
Eco47I	GGWCC	3 cut(s)	617, 1414, 1579
Eco53kI	GAGCTC	1 cut(s)	199
Eco57I	CTGAAG	3 cut(s)	1190, 1550, 1721
Eco88I	CYCGRG	3 cut(s)	598, 832, 1227
EcoICRI	GAGCTC	1 cut(s)	199
EcoO109I	RGGNCCY	1 cut(s)	1579
EcoRII	CCWGG	5 cut(s)	336, 800, 1003, 1190, 1542
EcoT14I	CCWWGG	1 cut(s)	693
EcoT38I	GRGCYC	1 cut(s)	201
ErhI	CCWWGG	1 cut(s)	693
FaeI	CATG	9 cut(s)	115, 306, 475, 481, 697, 1138, 1366, 1673, 1699
FaqI	GGGAC	2 cut(s)	1592, 1693
FatI	CATG	9 cut(s)	111, 302, 471, 477, 693, 1134, 1362, 1669, 1695
FauI	CCCGC	1 cut(s)	1188
FbaI	TGATCA	1 cut(s)	1585
FblI	GTMKAC	2 cut(s)	686, 948
Fnu4HI	GCNGC	3 cut(s)	644, 891, 1733
FokI	GGATG	3 cut(s)	404, 969, 1319
FriOI	GRGCYC	1 cut(s)	201
Fsp4HI	GCNGC	3 cut(s)	644, 891, 1733
GluI	GCNGC	3 cut(s)	644, 891, 1733
GsuI	CTGGAG	3 cut(s)	71, 784, 951
HaeIII	GGCC	7 cut(s)	94, 297, 398, 646, 1322, 1504, 1556
HapII	CCGG	6 cut(s)	108, 118, 485, 615, 723, 833
HgaI	GACGC	1 cut(s)	17
Hin1I	GRCGYC	1 cut(s)	9
Hin1II	CATG	9 cut(s)	115, 306, 475, 481, 697, 1138, 1366, 1673, 1699
HincII	GTYRAC	3 cut(s)	261, 508, 687
HindII	GTYRAC	3 cut(s)	261, 508, 687
HinfI	GANTC	9 cut(s)	66, 345, 361, 442, 596, 688, 785, 1513, 1826
HpaII	CCGG	6 cut(s)	108, 118, 485, 615, 723, 833
HphI	GGTGA	5 cut(s)	277, 352, 519, 1265, 1402
Hpy188III	TCNNGA	5 cut(s)	50, 218, 535, 1025, 1412
Hpy99I	CGWCG	4 cut(s)	77, 140, 212, 771
HpyAV	CCTTC	2 cut(s)	1253, 1745
HpyCH4III	ACNGT	3 cut(s)	265, 1692, 1811
HpyCH4IV	ACGT	7 cut(s)	72, 462, 563, 945, 1438, 1458, 1650
HpyF10VI	GCNNNNNNNGC	7 cut(s)	529, 707, 844, 1505, 1553, 1729, 1738
HpyF3I	CTNAG	8 cut(s)	170, 316, 590, 1120, 1347, 1446, 1548, 1860
HpySE526I	ACGT	7 cut(s)	72, 462, 563, 945, 1438, 1458, 1650
Hsp92I	GRCGYC	1 cut(s)	9
Hsp92II	CATG	9 cut(s)	115, 306, 475, 481, 697, 1138, 1366, 1673, 1699
KroI	GCCGGC	1 cut(s)	722
KroNI	GCCGGC	1 cut(s)	724
Ksp22I	TGATCA	1 cut(s)	1585
Kzo9I	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
LguI	GCTCTTC	1 cut(s)	1280
LmnI	GCTCC	6 cut(s)	235, 537, 803, 926, 971, 1714
Lsp1109I	GCAGC	1 cut(s)	1719
LweI	GCATC	2 cut(s)	947, 1038
MabI	ACCWGGT	1 cut(s)	336
MaeII	ACGT	7 cut(s)	72, 462, 563, 945, 1438, 1458, 1650
MaeIII	GTNAC	6 cut(s)	593, 651, 863, 1154, 1802, 1846
MalI	GATC	8 cut(s)	89, 321, 884, 1118, 1527, 1562, 1587, 1599
MbiI	CCGCTC	2 cut(s)	532, 1226
MboI	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
MboII	GAAGA	7 cut(s)	511, 574, 890, 1178, 1297, 1535, 1846
MflI	RGATCY	3 cut(s)	319, 1525, 1560
MhlI	GDGCHC	4 cut(s)	201, 1024, 1265, 1292
MlsI	TGGCCA	2 cut(s)	398, 1322
MluCI	AATT	6 cut(s)	607, 776, 839, 853, 1041, 1086
MluNI	TGGCCA	2 cut(s)	398, 1322
MlyI	GAGTC	5 cut(s)	60, 339, 590, 682, 779
MmeI	TCCRAC	1 cut(s)	469
Mox20I	TGGCCA	2 cut(s)	398, 1322
MroNI	GCCGGC	1 cut(s)	722
MroXI	GAANNNNTTC	1 cut(s)	1640
MscI	TGGCCA	2 cut(s)	398, 1322
MseI	TTAA	4 cut(s)	779, 1032, 1085, 1866
MslI	CAYNNNNRTG	9 cut(s)	110, 354, 476, 1251, 1278, 1388, 1572, 1674, 1812
Msp20I	TGGCCA	2 cut(s)	398, 1322
MspA1I	CMGCKG	1 cut(s)	874
MspI	CCGG	6 cut(s)	108, 118, 485, 615, 723, 833
MspR9I	CCNGG	7 cut(s)	338, 802, 833, 834, 1005, 1192, 1544
MvaI	CCWGG	5 cut(s)	338, 802, 1005, 1192, 1544
MwoI	GCNNNNNNNGC	7 cut(s)	529, 707, 844, 1505, 1553, 1729, 1738
NaeI	GCCGGC	1 cut(s)	724
NciI	CCSGG	2 cut(s)	833, 834
NcoI	CCATGG	1 cut(s)	693
NdeII	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
NgoMIV	GCCGGC	1 cut(s)	722
NlaIII	CATG	9 cut(s)	115, 306, 475, 481, 697, 1138, 1366, 1673, 1699
NlaIV	GGNNCC	9 cut(s)	619, 647, 799, 973, 1147, 1222, 1264, 1416, 1580
NmuCI	GTSAC	5 cut(s)	593, 651, 1154, 1802, 1846
NspI	RCATGY	3 cut(s)	115, 475, 1366
NspV	TTCGAA	1 cut(s)	364
OliI	CACNNNNGTG	2 cut(s)	1388, 1812
PaeR7I	CTCGAG	2 cut(s)	598, 1227
PaqCI	CACCTGC	1 cut(s)	701
PasI	CCCWGGG	1 cut(s)	1191
PciI	ACATGT	1 cut(s)	1362
PciSI	GCTCTTC	1 cut(s)	1280
PcsI	WCGNNNNNNNCGW	2 cut(s)	92, 192
PdiI	GCCGGC	1 cut(s)	724
PdmI	GAANNNNTTC	1 cut(s)	1640
PfeI	GAWTC	4 cut(s)	361, 442, 1513, 1826
PflFI	GACNNNGTC	1 cut(s)	1437
PkrI	GCNGC	3 cut(s)	645, 892, 1734
PleI	GAGTC	5 cut(s)	60, 339, 590, 682, 779
PpsI	GAGTC	5 cut(s)	60, 339, 590, 682, 779
PpuMI	RGGWCCY	1 cut(s)	1579
PscI	ACATGT	1 cut(s)	1362
PshBI	ATTAAT	1 cut(s)	1085
Psp124BI	GAGCTC	1 cut(s)	201
Psp5II	RGGWCCY	1 cut(s)	1579
Psp6I	CCWGG	5 cut(s)	336, 800, 1003, 1190, 1542
PspGI	CCWGG	5 cut(s)	336, 800, 1003, 1190, 1542
PspN4I	GGNNCC	9 cut(s)	619, 647, 799, 973, 1147, 1222, 1264, 1416, 1580
PspPI	GGNCC	5 cut(s)	617, 645, 1414, 1554, 1579
PspPPI	RGGWCCY	1 cut(s)	1579
PspXI	VCTCGAGB	2 cut(s)	598, 1227
PsuI	RGATCY	3 cut(s)	319, 1525, 1560
PsyI	GACNNNGTC	1 cut(s)	1437
RsaI	GTAC	3 cut(s)	62, 116, 1463
RsaNI	GTAC	3 cut(s)	61, 115, 1462
RseI	CAYNNNNRTG	9 cut(s)	110, 354, 476, 1251, 1278, 1388, 1572, 1674, 1812
SacI	GAGCTC	1 cut(s)	201
SalI	GTCGAC	1 cut(s)	685
SapI	GCTCTTC	1 cut(s)	1280
SaqAI	TTAA	4 cut(s)	779, 1032, 1085, 1866
SatI	GCNGC	3 cut(s)	644, 891, 1733
Sau3AI	GATC	8 cut(s)	87, 319, 882, 1116, 1525, 1560, 1585, 1597
Sau96I	GGNCC	5 cut(s)	617, 645, 1414, 1554, 1579
SchI	GAGTC	5 cut(s)	60, 339, 590, 682, 779
ScrFI	CCNGG	7 cut(s)	338, 802, 833, 834, 1005, 1192, 1544
SduI	GDGCHC	4 cut(s)	201, 1024, 1265, 1292
SexAI	ACCWGGT	1 cut(s)	336
SfaNI	GCATC	2 cut(s)	947, 1038
SfcI	CTRYAG	1 cut(s)	30
Sfr274I	CTCGAG	2 cut(s)	598, 1227
SfuI	TTCGAA	1 cut(s)	364
SinI	GGWCC	3 cut(s)	617, 1414, 1579
SlaI	CTCGAG	2 cut(s)	598, 1227
SmaI	CCCGGG	1 cut(s)	834
SmiMI	CAYNNNNRTG	9 cut(s)	110, 354, 476, 1251, 1278, 1388, 1572, 1674, 1812
SmlI	CTYRAG	3 cut(s)	598, 1227, 1718
SmoI	CTYRAG	3 cut(s)	598, 1227, 1718
Sse9I	AATT	6 cut(s)	607, 776, 839, 853, 1041, 1086
SstI	GAGCTC	1 cut(s)	201
StyD4I	CCNGG	7 cut(s)	336, 800, 831, 832, 1003, 1190, 1542
StyI	CCWWGG	1 cut(s)	693
TaaI	ACNGT	3 cut(s)	265, 1692, 1811
TaiI	ACGT	7 cut(s)	75, 465, 566, 948, 1441, 1461, 1653
TaqI	TCGA	8 cut(s)	86, 195, 210, 364, 599, 686, 761, 1228
TaqII	GACCGA	3 cut(s)	246, 287, 1052
TasI	AATT	6 cut(s)	607, 776, 839, 853, 1041, 1086
TatI	WGTACW	1 cut(s)	1461
TauI	GCSGC	2 cut(s)	646, 893
TfiI	GAWTC	4 cut(s)	361, 442, 1513, 1826
Tru1I	TTAA	4 cut(s)	779, 1032, 1085, 1866
Tru9I	TTAA	4 cut(s)	779, 1032, 1085, 1866
TscAI	CASTG	5 cut(s)	598, 967, 1515, 1651, 1774
TseFI	GTSAC	5 cut(s)	593, 651, 1154, 1802, 1846
TseI	GCWGC	1 cut(s)	1732
Tsp45I	GTSAC	5 cut(s)	593, 651, 1154, 1802, 1846
TspDTI	ATGAA	7 cut(s)	466, 718, 842, 907, 1071, 1235, 1712
TspGWI	ACGGA	4 cut(s)	1052, 1142, 1158, 1819
TspMI	CCCGGG	1 cut(s)	832
TspRI	CASTG	5 cut(s)	598, 967, 1515, 1651, 1774
Tth111I	GACNNNGTC	1 cut(s)	1437
VpaK11BI	GGWCC	3 cut(s)	617, 1414, 1579
VspI	ATTAAT	1 cut(s)	1085
XapI	RAATTY	1 cut(s)	607
XceI	RCATGY	3 cut(s)	115, 475, 1366
XhoI	CTCGAG	2 cut(s)	598, 1227
XmaI	CCCGGG	1 cut(s)	832
XmiI	GTMKAC	2 cut(s)	686, 948
XmnI	GAANNNNTTC	1 cut(s)	1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.