RLG00000030240

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
58142226 .. 58144618
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030240

Sequence Viewer

Length: 2301 bp
ATGTATGATTCTCAAACTTGGAGTGGAGATATCAACTCGAATTTCTTCCCCATAGAAGTTGGTACCCTTGTTTTGCCATCACTACTCTTTGCCTTGGCTGCCTTTCATTCAACCCCCGCTTCGACCGCTCCAAGTCTCTCTTCTCTGTCAAAGCCGGTGGCTGGCTACACCCTTCTCAAAGACTTCAACGCTTCTGTCACTGCAGATGCTGGGACGACGTCGCAGATGTGCAAAGAATTCTGTATTAACATTGAGCCAGAACAACAGATGCTGAACATCACATTCACTCCCTGCAATGATGGATATGCGTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTCTCTTTACTACACTGCAGCCCAAGGCCATGGGCCTAGTCTTATCGGCACCGAAAACCGGTACCCTGTGAAAAACAACACCGCTTTGGAGAATATCTACCGAATCAACGTCGGTGGAGACCCGGAACCATTCTCACCGAATGAAGACACCGGCATGTACCGCACCTGGTCAACGGATGACGACTACTTATTGCATTATTCAAGTTTCTGGCCGACACCACCCAGATTTGACCTTCAGCTCAAATTTGCAAGAATCCCTAACTACACTGCCCCGGAAGAGGTTTACCGAACCGGCCGGTCAATGAAGAGCTACAATCTCACCTGGGGGTTTCCTGTAGATCCACAATTTAATTACCTGGTGAGGCTTCATTTTTGTGAGATTGTACCAAATTATACGATGGATGGAGATCGTGTGTTTCAGATTTTTATAGATAACCAAACAGCGGAGCAGAAAGGGGACATAATCCAATGGAGTGGAGGAAATGGGATTCCCCTATATAGAGACTACCTTCTGTTCGTGCCCAGTCGTCCAAACAAGAAGAAAGGTAAAGTTGATATCATTGTTGCACTACAAGCAAATTCGGAATCTCGATATAAGGATGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAACGGCAATCTCGCCGGACCCAATCCCGACCCACCACCGCCACCGCCACCACCGCCGTTCTCAATCCCGACACAAACGGAACAACCAAATGTGAAACCGCTTCCTATGCTTCCTACCCTTGCCGGTGCAGTTTCGGTCTTACTTGTTCTTTCCCTAGTCGTGTTTTTACATTGCAGGCGTGGAACAGAACTCAAGGACTCCAGCTCCAGCCACAGGATGACGAGGCCAGCCATGACCAGTAGGTCACATTTACCCTCTTATTTGTGTCGTTACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAATACTTCGATGATACCTTCATTATTGGAGCTGGGGGATTTGGCAACGTATACAAAGGATTCATCGATGGTGGGGGCACTCCAGTTGCAATCAAACGGCTGAAAGCCATGTCATCACAAGGGTCCCGCGAGTTTAGGACGGAAATTGAGATGCTCTCTCGACTCCGCCACCGCCATTTGGTGTCTCTTATCGGATTTTGTGCCGATGAAGGTGAGATGATCTTGGTGTACGATTACATGGCACGTGGGACTCTTCGTGACCATCTCTACCACACTGATAATCCACCTCTTCCATGGGAACAACGGCTTCAAATTTGTATTGGCGCGGCGCAAGGTTTGCACTATCTTCACACAGGTACCAAGGGCACCATCATTCACCGTGACGTCAAGAGCACAAACATATTATTGGATGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCGAGAAAGGGCACAATCACCGTGTCTAAGACCCACATTAGCACGAAGGTGAAGGGTAGTTTTGGATATCTTGACCCGGATTACTATCGACGTCAACAATTAACCGAGAAGTCTGATGTGTACTCCCTCGGTGTAGTGTTGTGCGAGGTATTGTGTGGAAGGCCAGCTATAACAACCGTAGATAATAATCGAGTTGGCTTAGCTGGATGGGCCAAGAAGTGTCATCGTAATGGGAAACTTGATCAAATTATTGACCCAAATTTAAACGGTAAGATTGCGGCACGATGCTTGCACAAATTTGTTAACATGGCGATGAATTGCATAGATGATAATGGAGTCAATCGACCTTCGATGGATGATGTTGTGAGAGGGCTTCAATTTGCATTGCAGTTGCAACAGAACAAAGAGGATTATATTGATTACGTTGAAAGGACGCATGAAGATAAGATTGTTTCTATCAAGGACAATGAAGGGTCCAGTGAACAAGATTGTGGAGCGAACGAATCCGTGCAAGGGTTGACTGGGACGATCTTCTCTGAGATCATCGATCCGGTTGGTAGATAA

Protein Analysis

767

Amino Acids

85.42

Weight (kDa)

6.33

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 57 - 325 6.3e-26 Malectin-like domain
Malectin PF11721 184 - 284 9e-11 Malectin domain
Pkinase PF00069 438 - 701 6.6e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 439 - 702 1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1228
AatII GACGTC 3 cut(s) 221, 1677, 1831
Acc65I GGTACC 3 cut(s) 62, 405, 1646
AccB1I GGYRCC 5 cut(s) 62, 392, 405, 1646, 1655
AccBSI CCGCTC 1 cut(s) 128
AccI GTMKAC 1 cut(s) 1341
AccII CGCG 2 cut(s) 1419, 1616
AclWI GGATC 2 cut(s) 677, 2279
AcoI YGGCCR 2 cut(s) 554, 637
AcsI RAATTY 7 cut(s) 40, 236, 587, 922, 1602, 1996, 2033
AcuI CTGAAG 1 cut(s) 563
AcvI CACGTG 1 cut(s) 1535
AcyI GRCGYC 3 cut(s) 218, 1674, 1828
AfaI GTAC 7 cut(s) 64, 407, 503, 729, 1520, 1648, 1859
AfiI CCNNNNNNNGG 7 cut(s) 161, 402, 622, 787, 1200, 1468, 2250
AgeI ACCGGT 1 cut(s) 402
AgsI TTSAA 9 cut(s) 111, 187, 326, 546, 955, 973, 1601, 2114, 2165
AjnI CCWGG 3 cut(s) 509, 665, 699
AjuI GAANNNNNNNTTGG 2 cut(s) 124, 156
AleI CACNNNNGTG 1 cut(s) 1784
AluBI AGCT 6 cut(s) 583, 654, 1191, 1322, 1904, 1940
AluI AGCT 6 cut(s) 583, 654, 1191, 1322, 1904, 1940
Alw21I GWGCWC 1 cut(s) 1685
Alw26I GTCTC 4 cut(s) 140, 456, 840, 1479
AlwI GGATC 2 cut(s) 677, 2279
AlwNI CAGNNNCTG 2 cut(s) 209, 271
AoxI GGCC 7 cut(s) 370, 377, 554, 637, 1211, 1898, 1947
ApeKI GCWGC 2 cut(s) 98, 362
ApoI RAATTY 7 cut(s) 40, 236, 587, 922, 1602, 1996, 2033
AsiGI ACCGGT 1 cut(s) 402
Asp700I GAANNNNTTC 1 cut(s) 44
Asp718I GGTACC 3 cut(s) 62, 405, 1646
AspLEI GCGC 2 cut(s) 1616, 1621
AspS9I GGNCC 5 cut(s) 377, 1004, 1413, 1947, 2211
AsuC2I CCSGG 3 cut(s) 467, 617, 1814
AsuHPI GGTGA 7 cut(s) 471, 655, 715, 1514, 1658, 1747, 1798
AvaII GGWCC 3 cut(s) 1004, 1413, 2211
BaeGI GKGCMC 4 cut(s) 867, 1370, 1658, 1751
BaeI ACNNNNGTAYC 4 cut(s) 54, 87, 1630, 1663
BanI GGYRCC 5 cut(s) 62, 392, 405, 1646, 1655
BanII GRGCYC 1 cut(s) 963
BbrPI CACGTG 1 cut(s) 1535
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 1 cut(s) 1685
BbvI GCAGC 2 cut(s) 85, 374
BccI CCATC 9 cut(s) 85, 293, 736, 740, 1352, 1560, 1667, 1938, 2083
BceAI ACGGC 4 cut(s) 1006, 1027, 1403, 1610
BciT130I CCWGG 3 cut(s) 511, 667, 701
BclI TGATCA 1 cut(s) 1978
BcnI CCSGG 3 cut(s) 467, 617, 1814
BcoDI GTCTC 4 cut(s) 140, 456, 840, 1479
BfaI CTAG 2 cut(s) 381, 1142
BfmI CTRYAG 3 cut(s) 201, 360, 678
BisI GCNGC 5 cut(s) 99, 363, 1284, 1617, 2016
BlpI GCTNAGC 1 cut(s) 1936
BlsI GCNGC 5 cut(s) 100, 364, 1285, 1618, 2017
Bme1390I CCNGG 6 cut(s) 467, 511, 617, 667, 701, 1814
Bme18I GGWCC 3 cut(s) 1004, 1413, 2211
BmgT120I GGNCC 5 cut(s) 377, 1004, 1413, 1947, 2211
BmrFI CCNGG 6 cut(s) 467, 511, 617, 667, 701, 1814
BmrI ACTGGG 2 cut(s) 861, 2268
BmsI GCATC 5 cut(s) 196, 258, 934, 1431, 2012
BmuI ACTGGG 2 cut(s) 861, 2268
BpiI GAAGAC 1 cut(s) 495
BplI GAGNNNNNCTC 2 cut(s) 1430, 1462
BpmI CTGGAG 3 cut(s) 1171, 1177, 1356
Bpu1102I GCTNAGC 1 cut(s) 1936
BpuEI CTTGAG 1 cut(s) 1163
BpuMI CCSGG 3 cut(s) 467, 617, 1814
Bsa29I ATCGAT 2 cut(s) 1356, 2283
BsaAI YACGTR 1 cut(s) 1535
BsaBI GATNNNNATC 3 cut(s) 750, 1821, 1923
BsaHI GRCGYC 3 cut(s) 218, 1674, 1828
BsaI GGTCTC 1 cut(s) 456
BsaJI CCNNGG 9 cut(s) 93, 367, 373, 615, 666, 1583, 1650, 1716, 1864
BsaWI WCCGGW 2 cut(s) 402, 2287
BsaXI ACNNNNNCTCC 6 cut(s) 271, 301, 741, 771, 1175, 1205
Bsc4I CCNNNNNNNGG 7 cut(s) 161, 402, 622, 787, 1200, 1468, 2250
Bse118I RCCGGY 6 cut(s) 154, 402, 494, 635, 639, 1109
Bse1I ACTGG 6 cut(s) 867, 1224, 1272, 1373, 2214, 2263
Bse3DI GCAATG 3 cut(s) 301, 1156, 2120
Bse8I GATNNNNATC 3 cut(s) 750, 1821, 1923
BseBI CCWGG 3 cut(s) 511, 667, 701
BseCI ATCGAT 2 cut(s) 1356, 2283
BseDI CCNNGG 9 cut(s) 93, 367, 373, 615, 666, 1583, 1650, 1716, 1864
BseGI GGATG 7 cut(s) 526, 751, 949, 1209, 1705, 1949, 2098
BseJI GATNNNNATC 3 cut(s) 750, 1821, 1923
BseLI CCNNNNNNNGG 7 cut(s) 161, 402, 622, 787, 1200, 1468, 2250
BseMI GCAATG 3 cut(s) 301, 1156, 2120
BseMII CTCAG 1 cut(s) 2265
BseNI ACTGG 6 cut(s) 867, 1224, 1272, 1373, 2214, 2263
BseSI GKGCMC 4 cut(s) 867, 1370, 1658, 1751
BseX3I CGGCCG 1 cut(s) 637
BseXI GCAGC 2 cut(s) 85, 374
BseYI CCCAGC 2 cut(s) 209, 1322
BsgI GTGCAG 1 cut(s) 1134
Bsh1236I CGCG 2 cut(s) 1419, 1616
Bsh1285I CGRYCG 2 cut(s) 126, 640
BshFI GGCC 7 cut(s) 372, 379, 556, 639, 1213, 1900, 1949
BshNI GGYRCC 5 cut(s) 62, 392, 405, 1646, 1655
BshTI ACCGGT 1 cut(s) 402
BshVI ATCGAT 2 cut(s) 1356, 2283
BsiEI CGRYCG 2 cut(s) 126, 640
BsiHKAI GWGCWC 1 cut(s) 1685
BslFI GGGAC 5 cut(s) 226, 815, 1399, 1552, 2275
BslI CCNNNNNNNGG 7 cut(s) 161, 402, 622, 787, 1200, 1468, 2250
BsmAI GTCTC 4 cut(s) 140, 456, 840, 1479
BsmFI GGGAC 5 cut(s) 226, 815, 1399, 1552, 2275
BsnI GGCC 7 cut(s) 372, 379, 556, 639, 1213, 1900, 1949
Bso31I GGTCTC 1 cut(s) 456
Bsp1286I GDGCHC 6 cut(s) 867, 963, 1370, 1658, 1685, 1751
Bsp143I GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
Bsp1720I GCTNAGC 1 cut(s) 1936
Bsp19I CCATGG 2 cut(s) 373, 1583
BspANI GGCC 7 cut(s) 372, 379, 556, 639, 1213, 1900, 1949
BspCNI CTCAG 1 cut(s) 2266
BspDI ATCGAT 2 cut(s) 1356, 2283
BspFNI CGCG 2 cut(s) 1419, 1616
BspMAI CTGCAG 2 cut(s) 205, 364
BspPI GGATC 2 cut(s) 677, 2279
BspQI GCTCTTC 1 cut(s) 644
BspT107I GGYRCC 5 cut(s) 62, 392, 405, 1646, 1655
BspTNI GGTCTC 1 cut(s) 456
BsrBI CCGCTC 1 cut(s) 128
BsrDI GCAATG 3 cut(s) 301, 1156, 2120
BsrFI RCCGGY 6 cut(s) 154, 402, 494, 635, 639, 1109
BsrI ACTGG 6 cut(s) 867, 1224, 1272, 1373, 2214, 2263
BssAI RCCGGY 6 cut(s) 154, 402, 494, 635, 639, 1109
BssECI CCNNGG 9 cut(s) 93, 367, 373, 615, 666, 1583, 1650, 1716, 1864
BssMI GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
BssNAI GTATAC 1 cut(s) 1342
BssNI GRCGYC 3 cut(s) 218, 1674, 1828
BssT1I CCWWGG 6 cut(s) 93, 367, 373, 1583, 1650, 1716
Bst1107I GTATAC 1 cut(s) 1342
Bst2UI CCWGG 3 cut(s) 511, 667, 701
Bst4CI ACNGT 4 cut(s) 1670, 1759, 1915, 2006
Bst6I CTCTTC 5 cut(s) 145, 615, 644, 1548, 1584
BstACI GRCGYC 3 cut(s) 218, 1674, 1828
BstAPI GCANNNNNTGC 1 cut(s) 1627
BstBAI YACGTR 1 cut(s) 1535
BstC8I GCNNGC 6 cut(s) 163, 342, 1163, 1215, 1902, 2027
BstDEI CTNAG 3 cut(s) 1764, 1936, 2274
BstDSI CCRYGG 2 cut(s) 373, 1583
BstF5I GGATG 7 cut(s) 526, 751, 949, 1209, 1705, 1949, 2098
BstFNI CGCG 2 cut(s) 1419, 1616
BstHHI GCGC 2 cut(s) 1616, 1621
BstKTI GATC 8 cut(s) 685, 754, 1278, 1512, 1981, 2268, 2280, 2287
BstMAI GTCTC 4 cut(s) 140, 456, 840, 1479
BstMBI GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
BstMCI CGRYCG 2 cut(s) 126, 640
BstMWI GCNNNNNNNGC 8 cut(s) 98, 125, 504, 917, 1039, 1093, 1627, 1946
BstNI CCWGG 3 cut(s) 511, 667, 701
BstNSI RCATGY 1 cut(s) 502
BstSCI CCNGG 6 cut(s) 465, 509, 615, 665, 699, 1812
BstSFI CTRYAG 3 cut(s) 201, 360, 678
BstSLI GKGCMC 4 cut(s) 867, 1370, 1658, 1751
BstUI CGCG 2 cut(s) 1419, 1616
BstV1I GCAGC 2 cut(s) 85, 374
BstV2I GAAGAC 1 cut(s) 495
BstX2I RGATCY 1 cut(s) 682
BstXI CCANNNNNNTGG 2 cut(s) 374, 818
BstYI RGATCY 1 cut(s) 682
BstZ17I GTATAC 1 cut(s) 1342
BstZI CGGCCG 1 cut(s) 637
Bsu15I ATCGAT 2 cut(s) 1356, 2283
BsuRI GGCC 7 cut(s) 372, 379, 556, 639, 1213, 1900, 1949
BsuTUI ATCGAT 2 cut(s) 1356, 2283
BtgI CCRYGG 2 cut(s) 373, 1583
BtgZI GCGATG 1 cut(s) 2063
BtsCI GGATG 7 cut(s) 526, 751, 949, 1209, 1705, 1949, 2098
BtsI GCAGTG 3 cut(s) 198, 357, 609
BtsIMutI CAGTG 6 cut(s) 198, 357, 609, 1265, 1563, 2221
Cac8I GCNNGC 6 cut(s) 163, 342, 1163, 1215, 1902, 2027
CaiI CAGNNNCTG 2 cut(s) 209, 271
CfoI GCGC 2 cut(s) 1616, 1621
Cfr10I RCCGGY 6 cut(s) 154, 402, 494, 635, 639, 1109
Cfr13I GGNCC 5 cut(s) 377, 1004, 1413, 1947, 2211
ClaI ATCGAT 2 cut(s) 1356, 2283
CseI GACGC 1 cut(s) 2179
CsiI ACCWGGT 2 cut(s) 509, 699
Csp6I GTAC 7 cut(s) 63, 406, 502, 728, 1519, 1647, 1858
CspAI ACCGGT 1 cut(s) 402
CspCI CAANNNNNGTGG 4 cut(s) 138, 173, 439, 474
CviAII CATG 9 cut(s) 337, 374, 499, 1219, 1399, 1528, 1584, 2044, 2174
CviQI GTAC 7 cut(s) 63, 406, 502, 728, 1519, 1647, 1858
DdeI CTNAG 3 cut(s) 1764, 1936, 2274
DpnI GATC 8 cut(s) 684, 753, 1277, 1511, 1980, 2267, 2279, 2286
DpnII GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
DraI TTTAAA 1 cut(s) 2001
DrdI GACNNNNNNGTC 1 cut(s) 1228
DseDI GACNNNNNNGTC 1 cut(s) 1228
EaeI YGGCCR 2 cut(s) 554, 637
EagI CGGCCG 1 cut(s) 637
Eam1104I CTCTTC 5 cut(s) 145, 615, 644, 1548, 1584
EarI CTCTTC 5 cut(s) 145, 615, 644, 1548, 1584
EciI GGCGGA 1 cut(s) 1445
EclXI CGGCCG 1 cut(s) 637
Eco130I CCWWGG 6 cut(s) 93, 367, 373, 1583, 1650, 1716
Eco24I GRGCYC 1 cut(s) 963
Eco31I GGTCTC 1 cut(s) 456
Eco32I GATATC 3 cut(s) 31, 901, 1805
Eco47I GGWCC 3 cut(s) 1004, 1413, 2211
Eco52I CGGCCG 1 cut(s) 637
Eco57I CTGAAG 1 cut(s) 563
Eco72I CACGTG 1 cut(s) 1535
EcoO109I RGGNCCY 1 cut(s) 1413
EcoRI GAATTC 1 cut(s) 236
EcoRII CCWGG 3 cut(s) 509, 665, 699
EcoRV GATATC 3 cut(s) 31, 901, 1805
EcoT14I CCWWGG 6 cut(s) 93, 367, 373, 1583, 1650, 1716
EcoT38I GRGCYC 1 cut(s) 963
ErhI CCWWGG 6 cut(s) 93, 367, 373, 1583, 1650, 1716
FaeI CATG 9 cut(s) 340, 377, 502, 1222, 1402, 1531, 1587, 2047, 2177
FalI AAGNNNNNCTT 2 cut(s) 124, 156
FaqI GGGAC 5 cut(s) 226, 815, 1399, 1552, 2275
FatI CATG 9 cut(s) 336, 373, 498, 1218, 1398, 1527, 1583, 2043, 2173
FauI CCCGC 2 cut(s) 124, 1424
FbaI TGATCA 1 cut(s) 1978
FblI GTMKAC 1 cut(s) 1341
Fnu4HI GCNGC 5 cut(s) 99, 363, 1284, 1617, 2016
FokI GGATG 7 cut(s) 533, 758, 956, 1216, 1712, 1956, 2105
FriOI GRGCYC 1 cut(s) 963
Fsp4HI GCNGC 5 cut(s) 99, 363, 1284, 1617, 2016
FspBI CTAG 2 cut(s) 381, 1142
GlaI GCGC 2 cut(s) 1615, 1620
GluI GCNGC 5 cut(s) 99, 363, 1284, 1617, 2016
GsaI CCCAGC 2 cut(s) 213, 1326
GsuI CTGGAG 3 cut(s) 1171, 1177, 1356
HaeIII GGCC 7 cut(s) 372, 379, 556, 639, 1213, 1900, 1949
HgaI GACGC 1 cut(s) 2179
HhaI GCGC 2 cut(s) 1616, 1621
Hin1I GRCGYC 3 cut(s) 218, 1674, 1828
Hin1II CATG 9 cut(s) 340, 377, 502, 1222, 1402, 1531, 1587, 2047, 2177
Hin6I GCGC 2 cut(s) 1614, 1619
HinP1I GCGC 2 cut(s) 1614, 1619
HincII GTYRAC 4 cut(s) 516, 1832, 2041, 2256
HindII GTYRAC 4 cut(s) 516, 1832, 2041, 2256
HpaI GTTAAC 1 cut(s) 2041
HphI GGTGA 7 cut(s) 471, 655, 715, 1514, 1658, 1747, 1798
Hpy166II GTNNAC 9 cut(s) 516, 628, 1342, 1519, 1832, 1858, 2041, 2219, 2256
Hpy188I TCNGA 6 cut(s) 765, 928, 1484, 1726, 1852, 2275
Hpy188III TCNNGA 9 cut(s) 933, 952, 1013, 1054, 1449, 1547, 1678, 1740, 1808
Hpy8I GTNNAC 9 cut(s) 516, 628, 1342, 1519, 1832, 1858, 2041, 2219, 2256
Hpy99I CGWCG 4 cut(s) 220, 223, 458, 1830
HpyCH4III ACNGT 4 cut(s) 1670, 1759, 1915, 2006
HpyCH4IV ACGT 7 cut(s) 218, 453, 1338, 1534, 1674, 1828, 2160
HpyF10VI GCNNNNNNNGC 8 cut(s) 98, 125, 504, 917, 1039, 1093, 1627, 1946
HpyF3I CTNAG 3 cut(s) 1764, 1936, 2274
HpySE526I ACGT 7 cut(s) 218, 453, 1338, 1534, 1674, 1828, 2160
Hsp92I GRCGYC 3 cut(s) 218, 1674, 1828
Hsp92II CATG 9 cut(s) 340, 377, 502, 1222, 1402, 1531, 1587, 2047, 2177
HspAI GCGC 2 cut(s) 1614, 1619
KflI GGGWCCC 1 cut(s) 1413
KpnI GGTACC 3 cut(s) 66, 409, 1650
Ksp22I TGATCA 1 cut(s) 1978
KspAI GTTAAC 1 cut(s) 2041
Kzo9I GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
LguI GCTCTTC 1 cut(s) 644
LmnI GCTCC 5 cut(s) 133, 790, 1196, 1319, 2231
Lsp1109I GCAGC 2 cut(s) 85, 374
LweI GCATC 5 cut(s) 196, 258, 934, 1431, 2012
MabI ACCWGGT 2 cut(s) 509, 699
MaeI CTAG 2 cut(s) 381, 1142
MaeII ACGT 7 cut(s) 218, 453, 1338, 1534, 1674, 1828, 2160
MaeIII GTNAC 5 cut(s) 196, 1230, 1256, 1547, 1670
MalI GATC 8 cut(s) 684, 753, 1277, 1511, 1980, 2267, 2279, 2286
MbiI CCGCTC 1 cut(s) 128
MboI GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
MflI RGATCY 1 cut(s) 682
MhlI GDGCHC 6 cut(s) 867, 963, 1370, 1658, 1685, 1751
MlyI GAGTC 4 cut(s) 1178, 1446, 1534, 2082
MroXI GAANNNNTTC 1 cut(s) 44
MseI TTAA 5 cut(s) 246, 693, 1838, 2000, 2040
MslI CAYNNNNRTG 5 cut(s) 497, 717, 1784, 1965, 2048
MspA1I CMGCKG 1 cut(s) 788
MspR9I CCNGG 6 cut(s) 467, 511, 617, 667, 701, 1814
MteI GCGCNGCGC 1 cut(s) 1617
MvaI CCWGG 3 cut(s) 511, 667, 701
MvnI CGCG 2 cut(s) 1419, 1616
MwoI GCNNNNNNNGC 8 cut(s) 98, 125, 504, 917, 1039, 1093, 1627, 1946
NciI CCSGG 3 cut(s) 467, 617, 1814
NcoI CCATGG 2 cut(s) 373, 1583
NdeII GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
NlaIII CATG 9 cut(s) 340, 377, 502, 1222, 1402, 1531, 1587, 2047, 2177
NmuCI GTSAC 4 cut(s) 196, 1230, 1547, 1670
NspI RCATGY 1 cut(s) 502
OliI CACNNNNGTG 1 cut(s) 1784
PciSI GCTCTTC 1 cut(s) 644
PdmI GAANNNNTTC 1 cut(s) 44
PfeI GAWTC 7 cut(s) 8, 447, 597, 832, 929, 1350, 2240
PflFI GACNNNGTC 1 cut(s) 217
PinAI ACCGGT 1 cut(s) 402
PkrI GCNGC 5 cut(s) 100, 364, 1285, 1618, 2017
PleI GAGTC 4 cut(s) 1178, 1446, 1534, 2081
PmaCI CACGTG 1 cut(s) 1535
PmlI CACGTG 1 cut(s) 1535
PpsI GAGTC 4 cut(s) 1178, 1446, 1534, 2081
Ppu21I YACGTR 1 cut(s) 1535
PpuMI RGGWCCY 1 cut(s) 1413
Psp5II RGGWCCY 1 cut(s) 1413
Psp6I CCWGG 3 cut(s) 509, 665, 699
PspCI CACGTG 1 cut(s) 1535
PspFI CCCAGC 2 cut(s) 209, 1322
PspGI CCWGG 3 cut(s) 509, 665, 699
PspPI GGNCC 5 cut(s) 377, 1004, 1413, 1947, 2211
PspPPI RGGWCCY 1 cut(s) 1413
PstI CTGCAG 2 cut(s) 205, 364
PstNI CAGNNNCTG 2 cut(s) 209, 271
PsuI RGATCY 1 cut(s) 682
PsyI GACNNNGTC 1 cut(s) 217
RsaI GTAC 7 cut(s) 64, 407, 503, 729, 1520, 1648, 1859
RsaNI GTAC 7 cut(s) 63, 406, 502, 728, 1519, 1647, 1858
RseI CAYNNNNRTG 5 cut(s) 497, 717, 1784, 1965, 2048
SapI GCTCTTC 1 cut(s) 644
SaqAI TTAA 5 cut(s) 246, 693, 1838, 2000, 2040
SatI GCNGC 5 cut(s) 99, 363, 1284, 1617, 2016
Sau3AI GATC 8 cut(s) 682, 751, 1275, 1509, 1978, 2265, 2277, 2284
Sau96I GGNCC 5 cut(s) 377, 1004, 1413, 1947, 2211
SchI GAGTC 4 cut(s) 1178, 1446, 1534, 2082
ScrFI CCNGG 6 cut(s) 467, 511, 617, 667, 701, 1814
SduI GDGCHC 6 cut(s) 867, 963, 1370, 1658, 1685, 1751
SexAI ACCWGGT 2 cut(s) 509, 699
SfaNI GCATC 5 cut(s) 196, 258, 934, 1431, 2012
SfcI CTRYAG 3 cut(s) 201, 360, 678
SinI GGWCC 3 cut(s) 1004, 1413, 2211
SmiMI CAYNNNNRTG 5 cut(s) 497, 717, 1784, 1965, 2048
SmlI CTYRAG 1 cut(s) 1178
SmoI CTYRAG 1 cut(s) 1178
SspMI CTAG 2 cut(s) 381, 1142
StyD4I CCNGG 6 cut(s) 465, 509, 615, 665, 699, 1812
StyI CCWWGG 6 cut(s) 93, 367, 373, 1583, 1650, 1716
TaaI ACNGT 4 cut(s) 1670, 1759, 1915, 2006
TaiI ACGT 7 cut(s) 221, 456, 1341, 1537, 1677, 1831, 2163
TaqII GACCGA 1 cut(s) 1111
TatI WGTACW 1 cut(s) 1857
TauI GCSGC 3 cut(s) 1286, 1619, 2018
TfiI GAWTC 7 cut(s) 8, 447, 597, 832, 929, 1350, 2240
Tru1I TTAA 5 cut(s) 246, 693, 1838, 2000, 2040
Tru9I TTAA 5 cut(s) 246, 693, 1838, 2000, 2040
TscAI CASTG 6 cut(s) 205, 364, 616, 1272, 1570, 2221
TseFI GTSAC 4 cut(s) 196, 1230, 1547, 1670
TseI GCWGC 2 cut(s) 98, 362
Tsp45I GTSAC 4 cut(s) 196, 1230, 1547, 1670
TspGWI ACGGA 4 cut(s) 533, 1079, 1445, 2233
TspRI CASTG 6 cut(s) 205, 364, 616, 1272, 1570, 2221
Tth111I GACNNNGTC 1 cut(s) 217
VpaK11BI GGWCC 3 cut(s) 1004, 1413, 2211
XapI RAATTY 7 cut(s) 40, 236, 587, 922, 1602, 1996, 2033
XceI RCATGY 1 cut(s) 502
XcmI CCANNNNNNNNNTGG 1 cut(s) 1581
XmiI GTMKAC 1 cut(s) 1341
XmnI GAANNNNTTC 1 cut(s) 44
XspI CTAG 2 cut(s) 381, 1142
ZraI GACGTC 3 cut(s) 219, 1675, 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.