Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000675.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

22619 .. 25222

Gene Structure 2604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000675.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

atgaaaccaattctcgctcttctttatccttccagcttgtttctactcttcgtcaccccactggtggccggagagtccgcaccgatctactctccagtcgatggtatcagccttaactgcggatctgacggtgacacaatcggtgattatgattctcgaacttggaggggagatatcaagtcaaagctttccccagaagaagttggtagcacgtcccaggtcgaaaatgcacccctgtcctcctcctcaggcagcctagtaccattcatcacagctcggctttcacattcagaattcacttacagatttcccgtcagtccaggccagaagttcatccgcttgtttttcttcccggctacatacaatgctgacttcgactactcgaaatcacttttctctgtcaaagccggtggctacagacttctcaaggacttcaacgcttctctcagtagtatatcttacgatggctctgagacgctactcagagaattctgcgtcaactttgagccagaagagcggagtctgaacatcacattcactcccagcaaggatggatacgcgtttatcaacgggatcgaaatcatgtctatgccgatcaatctttaccactcggcagcccaaggcgatggggctagttatctcggcagcagcggtaccagttattacgttgataactacaccgctctggaaatgatctaccgaatcaatgttggtggcggcccagtatctccgaatgaagacaccggattgtaccgtacctggaatccaaccgacgagttctacttggataatcgaagtaatacttcgagctttgtatggcgaagcaaaaatactcatctcaatttctatgaagcaagaatccctaactacacagctcctgaagaagtgtaccgaacgggccggacaatgggaggaaacagtactatcaacaagagctacaatctcacctggggatttcccgtagatcccaacttttcttacctggtgaggctccatttctgtgagattgaatccgatgttaccaaggccggagatagaatgtttcagattttcattaccaatttaatagctgaagagcacgcggacataatcggatggactgcagaaaatggggaaggcaatgggattcccatatataaggactactttgtgcccatgccgactcttggaacccagaagaaaggtttagttgatctccttgttgcactacaagcaaatcaagatgattttgaaactagatttaccaatgtgatcttgaatgggctcgaaatcttcaaactaaatgacacagacggcaatctcggcggactgatccccatgttaccgctggatatcccgcaaaaggtgacgtcgaaaagctctagaaagtcaaagaagtcatggattcctatgcttgctatccttgccggtgtagtttccatcttacttgttctttcccgagtcgggcttttagttttcaggcgtggaagaaaactcaaggactccggctccagccacaggatgacgatgtcaaccacgaaccttgggtcatatatcccatcttatttgtgtcggtacttttcactggcagcgatcaaagccgccaccaataacttcgatgacacttttatcattgggattggtgggtttggccacgtgtacaaaggactctttgatgatgggctcacccttgttgcaatcaaacggctcaaagctacttcatcgcagggcgctcaagagttcatgacggaaatcaagatgctatcccaactacgccaccgccatttggtgtctctaattggatattgtgccgatcaaggtgagatgctcttagtgtacgattacatggcacgtgggacccttagtgatcatttacaccagactgagaatccgcatcttccttggaaactaaggcttccgatttgtgttggtgcagcgcaaggtttgcactaccttcacacaggtaccaaaggcaccatcattcaccgtgacataaagagcacaaacatattactagacgagaaatgggtagccaaggtttcggattttgggttatcaaaaatgggtaatatcacaatgtccaggacccacattagcacgaaggtgaagggtagtttcggatatcttgaccctgattactaccagcgacaacaattgactgagaagtccgacgtgtactcatttggtgtagtgttatgtgaagtattgtgtgggaggccagctgtgaccattgtggataataatcgagttggcttagctagatgggccaaaaagtgtcatcgcgatgggaaacttgatcagattgttgacccaaatttgaagggtgaaattgcagtccgatgcttgcataaatttgctttcatcgcaatgagttgcatggatgataatgggatcaatcggccatcaatggatgatgttgtgagagggcttcagtttgcattgcagatgcagcaaaacaacgaggattatattgatcacattgaaaggacgattcaagataagatttcattgatcaagggtaatgaagggtcttgttctagtgagcaaagcagtggggcgaacgaatccgtccaagagttgacaaggacaattttctctgagatcattgatccggttggaagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

867

Amino Acids

96.58

Weight (kDa)

6.28

Isoelectric Point (pI)

36.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2143
AatII	GACGTC	1 cut(s)	1352
Acc65I	GGTACC	2 cut(s)	653, 1943
AccB1I	GGYRCC	3 cut(s)	653, 1943, 1952
AccB7I	CCANNNNNTGG	1 cut(s)	101
AccBSI	CCGCTC	2 cut(s)	517, 683
AccII	CGCG	3 cut(s)	560, 1082, 2262
AclWI	GGATC	6 cut(s)	130, 581, 959, 1306, 2378, 2582
AcoI	YGGCCR	3 cut(s)	66, 1630, 2378
AcsI	RAATTY	4 cut(s)	293, 488, 2293, 2330
AcuI	CTGAAG	3 cut(s)	900, 1092, 2393
AcvI	CACGTG	2 cut(s)	1636, 1832
AcyI	GRCGYC	1 cut(s)	1349
AfiI	CCNNNNNNNGG	8 cut(s)	64, 101, 907, 1166, 1342, 1443, 1497, 1765
AflIII	ACRYGT	3 cut(s)	558, 1635, 2151
AgsI	TTSAA	8 cut(s)	436, 1010, 1232, 1258, 1276, 2299, 2462, 2474
AjiI	CACGTC	2 cut(s)	213, 2152
AjnI	CCWGG	6 cut(s)	216, 319, 758, 947, 981, 2060
AleI	CACNNNNGTG	1 cut(s)	2081
Alw21I	GWGCWC	2 cut(s)	1080, 1982
Alw26I	GTCTC	2 cut(s)	467, 1776
AlwI	GGATC	6 cut(s)	130, 581, 959, 1306, 2378, 2582
AlwNI	CAGNNNCTG	1 cut(s)	878
Ama87I	CYCGRG	1 cut(s)	1437
AoxI	GGCC	9 cut(s)	66, 322, 718, 898, 1026, 1630, 2195, 2244, 2378
ApeKI	GCWGC	7 cut(s)	252, 614, 645, 648, 1568, 1913, 2428
ApoI	RAATTY	4 cut(s)	293, 488, 2293, 2330
ArsI	GACNNNNNNTTYG	2 cut(s)	1511, 1543
Asp718I	GGTACC	2 cut(s)	653, 1943
AspLEI	GCGC	2 cut(s)	1712, 1918
AspS9I	GGNCC	5 cut(s)	719, 898, 1836, 2064, 2244
AsuC2I	CCSGG	1 cut(s)	353
AvaI	CYCGRG	1 cut(s)	1437
AvaII	GGWCC	2 cut(s)	1836, 2064
AxyI	CCTNAGG	1 cut(s)	247
BaeGI	GKGCMC	1 cut(s)	1155
BaeI	ACNNNNGTAYC	2 cut(s)	1927, 1960
BalI	TGGCCA	1 cut(s)	1632
BanI	GGYRCC	3 cut(s)	653, 1943, 1952
BanII	GRGCYC	2 cut(s)	1266, 1665
BarI	GAAGNNNNNNTAC	2 cut(s)	814, 846
BbrPI	CACGTG	2 cut(s)	1636, 1832
BbsI	GAAGAC	1 cut(s)	744
Bbv12I	GWGCWC	2 cut(s)	1080, 1982
BbvI	GCAGC	7 cut(s)	264, 626, 657, 660, 1580, 1925, 2440
BceAI	ACGGC	2 cut(s)	1309, 1700
BciT130I	CCWGG	6 cut(s)	218, 321, 760, 949, 983, 2062
BciVI	GTATCC	1 cut(s)	548
BclI	TGATCA	4 cut(s)	1846, 2275, 2452, 2490
BcnI	CCSGG	1 cut(s)	353
BcoDI	GTCTC	2 cut(s)	467, 1776
BfaI	CTAG	7 cut(s)	257, 633, 1236, 1362, 1994, 2238, 2517
BfmI	CTRYAG	2 cut(s)	415, 1101
BfoI	RGCGCY	1 cut(s)	1713
BfuI	GTATCC	1 cut(s)	548
BisI	GCNGC	9 cut(s)	253, 615, 646, 649, 718, 1569, 1581, 1914, 2429
BlpI	GCTNAGC	1 cut(s)	2233
BlsI	GCNGC	9 cut(s)	254, 616, 647, 650, 719, 1570, 1582, 1915, 2430
BmcAI	AGTACT	1 cut(s)	922
Bme1390I	CCNGG	7 cut(s)	218, 321, 353, 760, 949, 983, 2062
Bme18I	GGWCC	2 cut(s)	1836, 2064
BmeT110I	CYCGRG	1 cut(s)	1437
BmgBI	CACGTC	2 cut(s)	213, 2152
BmgT120I	GGNCC	5 cut(s)	719, 898, 1836, 2064, 2244
BmiI	GGNNCC	9 cut(s)	655, 992, 1171, 1489, 1837, 1838, 1945, 1954, 2066
BmrFI	CCNGG	7 cut(s)	218, 321, 353, 760, 949, 983, 2062
BmrI	ACTGGG	1 cut(s)	716
BmsI	GCATC	5 cut(s)	1728, 1794, 1882, 2309, 2415
BmuI	ACTGGG	1 cut(s)	716
BpiI	GAAGAC	1 cut(s)	744
BpmI	CTGGAG	2 cut(s)	78, 1474
Bpu1102I	GCTNAGC	1 cut(s)	2233
BpuEI	CTTGAG	3 cut(s)	410, 1460, 1698
BpuMI	CCSGG	1 cut(s)	353
BsaAI	YACGTR	2 cut(s)	1636, 1832
BsaBI	GATNNNNATC	2 cut(s)	578, 2220
BsaHI	GRCGYC	1 cut(s)	1349
BsaJI	CCNNGG	7 cut(s)	216, 619, 948, 1023, 1522, 1880, 2013
BsaWI	WCCGGW	2 cut(s)	743, 2590
BsaXI	ACNNNNNCTCC	4 cut(s)	523, 553, 1472, 1502
Bsc4I	CCNNNNNNNGG	8 cut(s)	64, 101, 907, 1166, 1342, 1443, 1497, 1765
Bse118I	RCCGGY	2 cut(s)	407, 1406
Bse1I	ACTGG	5 cut(s)	66, 95, 657, 722, 1569
Bse21I	CCTNAGG	1 cut(s)	247
Bse3DI	GCAATG	3 cut(s)	1126, 2352, 2417
Bse8I	GATNNNNATC	2 cut(s)	578, 2220
BseBI	CCWGG	6 cut(s)	218, 321, 760, 949, 983, 2062
BseDI	CCNNGG	7 cut(s)	216, 619, 948, 1023, 1522, 1880, 2013
BseGI	GGATG	6 cut(s)	333, 556, 1100, 1506, 2365, 2395
BseJI	GATNNNNATC	2 cut(s)	578, 2220
BseLI	CCNNNNNNNGG	8 cut(s)	64, 101, 907, 1166, 1342, 1443, 1497, 1765
BseMI	GCAATG	3 cut(s)	1126, 2352, 2417
BseMII	CTCAG	7 cut(s)	261, 460, 462, 496, 1854, 2130, 2568
BseNI	ACTGG	5 cut(s)	66, 95, 657, 722, 1569
BseRI	GAGGAG	2 cut(s)	232, 235
BseSI	GKGCMC	1 cut(s)	1155
BseXI	GCAGC	7 cut(s)	264, 626, 657, 660, 1580, 1925, 2440
BseYI	CCCAGC	1 cut(s)	542
BsgI	GTGCAG	1 cut(s)	1932
Bsh1236I	CGCG	3 cut(s)	560, 1082, 2262
BshFI	GGCC	9 cut(s)	68, 324, 720, 900, 1028, 1632, 2197, 2246, 2380
BshNI	GGYRCC	3 cut(s)	653, 1943, 1952
BsiHKAI	GWGCWC	2 cut(s)	1080, 1982
BsiHKCI	CYCGRG	1 cut(s)	1437
BsiSI	CCGG	9 cut(s)	69, 353, 408, 744, 901, 1029, 1407, 1485, 2591
BslFI	GGGAC	2 cut(s)	199, 1849
BslI	CCNNNNNNNGG	8 cut(s)	64, 101, 907, 1166, 1342, 1443, 1497, 1765
BsmAI	GTCTC	2 cut(s)	467, 1776
BsmBI	CGTCTC	1 cut(s)	467
BsmFI	GGGAC	2 cut(s)	199, 1849
BsnI	GGCC	9 cut(s)	68, 324, 720, 900, 1028, 1632, 2197, 2246, 2380
BsoBI	CYCGRG	1 cut(s)	1437
Bsp1286I	GDGCHC	5 cut(s)	1080, 1155, 1266, 1665, 1982
Bsp1407I	TGTACA	1 cut(s)	1638
Bsp1720I	GCTNAGC	1 cut(s)	2233
Bsp68I	TCGCGA	1 cut(s)	2262
BspANI	GGCC	9 cut(s)	68, 324, 720, 900, 1028, 1632, 2197, 2246, 2380
BspCNI	CTCAG	7 cut(s)	260, 459, 463, 495, 1855, 2131, 2569
BspFNI	CGCG	3 cut(s)	560, 1082, 2262
BspHI	TCATGA	1 cut(s)	1722
BspLI	GGNNCC	9 cut(s)	655, 992, 1171, 1489, 1837, 1838, 1945, 1954, 2066
BspMAI	CTGCAG	1 cut(s)	1105
BspPI	GGATC	6 cut(s)	130, 581, 959, 1306, 2378, 2582
BspQI	GCTCTTC	3 cut(s)	24, 507, 1068
BspT107I	GGYRCC	3 cut(s)	653, 1943, 1952
BsrBI	CCGCTC	2 cut(s)	517, 683
BsrDI	GCAATG	3 cut(s)	1126, 2352, 2417
BsrFI	RCCGGY	2 cut(s)	407, 1406
BsrGI	TGTACA	1 cut(s)	1638
BsrI	ACTGG	5 cut(s)	66, 95, 657, 722, 1569
BssAI	RCCGGY	2 cut(s)	407, 1406
BssECI	CCNNGG	7 cut(s)	216, 619, 948, 1023, 1522, 1880, 2013
BssNI	GRCGYC	1 cut(s)	1349
BssT1I	CCWWGG	5 cut(s)	619, 1023, 1522, 1880, 2013
Bst2UI	CCWGG	6 cut(s)	218, 321, 760, 949, 983, 2062
Bst4CI	ACNGT	4 cut(s)	131, 755, 920, 1967
Bst6I	CTCTTC	4 cut(s)	24, 53, 507, 1068
BstACI	GRCGYC	1 cut(s)	1349
BstAPI	GCANNNNNTGC	1 cut(s)	1924
BstAUI	TGTACA	1 cut(s)	1638
BstBAI	YACGTR	2 cut(s)	1636, 1832
BstC8I	GCNNGC	4 cut(s)	1080, 1395, 2199, 2324
BstF5I	GGATG	6 cut(s)	333, 556, 1100, 1506, 2365, 2395
BstFNI	CGCG	3 cut(s)	560, 1082, 2262
BstH2I	RGCGCY	1 cut(s)	1713
BstHHI	GCGC	2 cut(s)	1712, 1918
BstMAI	GTCTC	2 cut(s)	467, 1776
BstNI	CCWGG	6 cut(s)	218, 321, 760, 949, 983, 2062
BstSCI	CCNGG	7 cut(s)	216, 319, 351, 758, 947, 981, 2060
BstSFI	CTRYAG	2 cut(s)	415, 1101
BstSLI	GKGCMC	1 cut(s)	1155
BstUI	CGCG	3 cut(s)	560, 1082, 2262
BstV1I	GCAGC	7 cut(s)	264, 626, 657, 660, 1580, 1925, 2440
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	2 cut(s)	122, 964
BstXI	CCANNNNNNTGG	1 cut(s)	626
BstYI	RGATCY	2 cut(s)	122, 964
Bsu36I	CCTNAGG	1 cut(s)	247
BsuI	GTATCC	1 cut(s)	548
BsuRI	GGCC	9 cut(s)	68, 324, 720, 900, 1028, 1632, 2197, 2246, 2380
BtgZI	GCGATG	5 cut(s)	639, 1686, 2243, 2277, 2326
BtrI	CACGTC	2 cut(s)	213, 2152
BtsCI	GGATG	6 cut(s)	333, 556, 1100, 1506, 2365, 2395
BtsI	GCAGTG	1 cut(s)	2536
BtsIMutI	CAGTG	3 cut(s)	59, 1562, 2536
BtuMI	TCGCGA	1 cut(s)	2262
Cac8I	GCNNGC	4 cut(s)	1080, 1395, 2199, 2324
CaiI	CAGNNNCTG	1 cut(s)	878
CciI	TCATGA	1 cut(s)	1722
CfoI	GCGC	2 cut(s)	1712, 1918
Cfr10I	RCCGGY	2 cut(s)	407, 1406
Cfr13I	GGNCC	5 cut(s)	719, 898, 1836, 2064, 2244
CseI	GACGC	2 cut(s)	484, 484
CsiI	ACCWGGT	1 cut(s)	981
CspCI	CAANNNNNGTGG	6 cut(s)	391, 426, 694, 729, 1504, 1539
CviAII	CATG	7 cut(s)	583, 1156, 1318, 1380, 1723, 1825, 2356
DrdI	GACNNNNNNGTC	1 cut(s)	2143
DseDI	GACNNNNNNGTC	1 cut(s)	2143
EaeI	YGGCCR	3 cut(s)	66, 1630, 2378
Eam1104I	CTCTTC	4 cut(s)	24, 53, 507, 1068
EarI	CTCTTC	4 cut(s)	24, 53, 507, 1068
EciI	GGCGGA	1 cut(s)	1320
Eco130I	CCWWGG	5 cut(s)	619, 1023, 1522, 1880, 2013
Eco24I	GRGCYC	2 cut(s)	1266, 1665
Eco32I	GATATC	3 cut(s)	175, 1333, 2102
Eco47I	GGWCC	2 cut(s)	1836, 2064
Eco57I	CTGAAG	3 cut(s)	900, 1092, 2393
Eco72I	CACGTG	2 cut(s)	1636, 1832
Eco81I	CCTNAGG	1 cut(s)	247
Eco88I	CYCGRG	1 cut(s)	1437
EcoO109I	RGGNCCY	2 cut(s)	1836, 2064
EcoRI	GAATTC	2 cut(s)	293, 488
EcoRII	CCWGG	6 cut(s)	216, 319, 758, 947, 981, 2060
EcoRV	GATATC	3 cut(s)	175, 1333, 2102
EcoT14I	CCWWGG	5 cut(s)	619, 1023, 1522, 1880, 2013
EcoT38I	GRGCYC	2 cut(s)	1266, 1665
ErhI	CCWWGG	5 cut(s)	619, 1023, 1522, 1880, 2013
Esp3I	CGTCTC	1 cut(s)	467
FaeI	CATG	7 cut(s)	586, 1159, 1321, 1383, 1726, 1828, 2359
FalI	AAGNNNNNCTT	4 cut(s)	787, 819, 1130, 1162
FaqI	GGGAC	2 cut(s)	199, 1849
FatI	CATG	7 cut(s)	582, 1155, 1317, 1379, 1722, 1824, 2355
FauI	CCCGC	1 cut(s)	1344
FbaI	TGATCA	4 cut(s)	1846, 2275, 2452, 2490
Fnu4HI	GCNGC	9 cut(s)	253, 615, 646, 649, 718, 1569, 1581, 1914, 2429
FokI	GGATG	6 cut(s)	320, 563, 1107, 1513, 2372, 2402
FriOI	GRGCYC	2 cut(s)	1266, 1665
Fsp4HI	GCNGC	9 cut(s)	253, 615, 646, 649, 718, 1569, 1581, 1914, 2429
FspBI	CTAG	7 cut(s)	257, 633, 1236, 1362, 1994, 2238, 2517
GlaI	GCGC	2 cut(s)	1711, 1917
GluI	GCNGC	9 cut(s)	253, 615, 646, 649, 718, 1569, 1581, 1914, 2429
GsaI	CCCAGC	1 cut(s)	546
GsuI	CTGGAG	2 cut(s)	78, 1474
HaeII	RGCGCY	1 cut(s)	1713
HaeIII	GGCC	9 cut(s)	68, 324, 720, 900, 1028, 1632, 2197, 2246, 2380
HapII	CCGG	9 cut(s)	69, 353, 408, 744, 901, 1029, 1407, 1485, 2591
HgaI	GACGC	2 cut(s)	484, 484
HhaI	GCGC	2 cut(s)	1712, 1918
Hin1I	GRCGYC	1 cut(s)	1349
Hin1II	CATG	7 cut(s)	586, 1159, 1321, 1383, 1726, 1828, 2359
Hin6I	GCGC	2 cut(s)	1710, 1916
HinP1I	GCGC	2 cut(s)	1710, 1916
HincII	GTYRAC	4 cut(s)	499, 1512, 2287, 2559
HindII	GTYRAC	4 cut(s)	499, 1512, 2287, 2559
HindIII	AAGCTT	1 cut(s)	185
HpaII	CCGG	9 cut(s)	69, 353, 408, 744, 901, 1029, 1407, 1485, 2591
Hpy166II	GTNNAC	8 cut(s)	499, 889, 1512, 1639, 1816, 2155, 2287, 2559
Hpy8I	GTNNAC	8 cut(s)	499, 889, 1512, 1639, 1816, 2155, 2287, 2559
Hpy99I	CGWCG	3 cut(s)	776, 1354, 2153
HpyAV	CCTTC	7 cut(s)	39, 1109, 1943, 2074, 2080, 2293, 2498
HpyCH4III	ACNGT	4 cut(s)	131, 755, 920, 1967
HpyCH4IV	ACGT	6 cut(s)	212, 666, 1349, 1635, 1831, 2151
HpySE526I	ACGT	6 cut(s)	212, 666, 1349, 1635, 1831, 2151
Hsp92I	GRCGYC	1 cut(s)	1349
Hsp92II	CATG	7 cut(s)	586, 1159, 1321, 1383, 1726, 1828, 2359
HspAI	GCGC	2 cut(s)	1710, 1916
KflI	GGGWCCC	1 cut(s)	1836
KpnI	GGTACC	2 cut(s)	657, 1947
Ksp22I	TGATCA	4 cut(s)	1846, 2275, 2452, 2490
LguI	GCTCTTC	3 cut(s)	24, 507, 1068
LmnI	GCTCC	3 cut(s)	880, 996, 1493
Lsp1109I	GCAGC	7 cut(s)	264, 626, 657, 660, 1580, 1925, 2440
LweI	GCATC	5 cut(s)	1728, 1794, 1882, 2309, 2415
MabI	ACCWGGT	1 cut(s)	981
MaeI	CTAG	7 cut(s)	257, 633, 1236, 1362, 1994, 2238, 2517
MaeII	ACGT	6 cut(s)	212, 666, 1349, 1635, 1831, 2151
MaeIII	GTNAC	7 cut(s)	52, 131, 1018, 1320, 1345, 1967, 2203
MbiI	CCGCTC	2 cut(s)	517, 683
MfeI	CAATTG	1 cut(s)	2132
MflI	RGATCY	2 cut(s)	122, 964
MhlI	GDGCHC	5 cut(s)	1080, 1155, 1266, 1665, 1982
MlsI	TGGCCA	1 cut(s)	1632
MluI	ACGCGT	1 cut(s)	558
MluNI	TGGCCA	1 cut(s)	1632
MlyI	GAGTC	6 cut(s)	83, 529, 1156, 1449, 1475, 1641
MmeI	TCCRAC	3 cut(s)	791, 2172, 2575
MnlI	CCTC	9 cut(s)	159, 250, 253, 256, 905, 981, 2187, 2396, 2434
Mox20I	TGGCCA	1 cut(s)	1632
MscI	TGGCCA	1 cut(s)	1632
MseI	TTAA	2 cut(s)	114, 1064
MslI	CAYNNNNRTG	5 cut(s)	587, 999, 2081, 2262, 2345
Msp20I	TGGCCA	1 cut(s)	1632
MspA1I	CMGCKG	3 cut(s)	651, 1327, 2201
MspI	CCGG	9 cut(s)	69, 353, 408, 744, 901, 1029, 1407, 1485, 2591
MspR9I	CCNGG	7 cut(s)	218, 321, 353, 760, 949, 983, 2062
MunI	CAATTG	1 cut(s)	2132
MvaI	CCWGG	6 cut(s)	218, 321, 760, 949, 983, 2062
MvnI	CGCG	3 cut(s)	560, 1082, 2262
NciI	CCSGG	1 cut(s)	353
NlaIII	CATG	7 cut(s)	586, 1159, 1321, 1383, 1726, 1828, 2359
NlaIV	GGNNCC	9 cut(s)	655, 992, 1171, 1489, 1837, 1838, 1945, 1954, 2066
NmeAIII	GCCGAG	4 cut(s)	256, 590, 621, 1281
NmuCI	GTSAC	5 cut(s)	52, 131, 1345, 1967, 2203
NruI	TCGCGA	1 cut(s)	2262
OliI	CACNNNNGTG	1 cut(s)	2081
PagI	TCATGA	1 cut(s)	1722
PciSI	GCTCTTC	3 cut(s)	24, 507, 1068
PflFI	GACNNNGTC	1 cut(s)	1507
PflMI	CCANNNNNTGG	1 cut(s)	101
PfoI	TCCNGGA	1 cut(s)	2060
PkrI	GCNGC	9 cut(s)	254, 616, 647, 650, 719, 1570, 1582, 1915, 2430
PleI	GAGTC	6 cut(s)	82, 528, 1156, 1448, 1475, 1641
PmaCI	CACGTG	2 cut(s)	1636, 1832
PmlI	CACGTG	2 cut(s)	1636, 1832
PpsI	GAGTC	6 cut(s)	82, 528, 1156, 1448, 1475, 1641
Ppu21I	YACGTR	2 cut(s)	1636, 1832
PpuMI	RGGWCCY	2 cut(s)	1836, 2064
Psp5II	RGGWCCY	2 cut(s)	1836, 2064
Psp6I	CCWGG	6 cut(s)	216, 319, 758, 947, 981, 2060
PspCI	CACGTG	2 cut(s)	1636, 1832
PspFI	CCCAGC	1 cut(s)	542
PspGI	CCWGG	6 cut(s)	216, 319, 758, 947, 981, 2060
PspN4I	GGNNCC	9 cut(s)	655, 992, 1171, 1489, 1837, 1838, 1945, 1954, 2066
PspPI	GGNCC	5 cut(s)	719, 898, 1836, 2064, 2244
PspPPI	RGGWCCY	2 cut(s)	1836, 2064
PstI	CTGCAG	1 cut(s)	1105
PstNI	CAGNNNCTG	1 cut(s)	878
PsuI	RGATCY	2 cut(s)	122, 964
PsyI	GACNNNGTC	1 cut(s)	1507
PvuII	CAGCTG	1 cut(s)	2201
RruI	TCGCGA	1 cut(s)	2262
RseI	CAYNNNNRTG	5 cut(s)	587, 999, 2081, 2262, 2345
SapI	GCTCTTC	3 cut(s)	24, 507, 1068
SaqAI	TTAA	2 cut(s)	114, 1064
SatI	GCNGC	9 cut(s)	253, 615, 646, 649, 718, 1569, 1581, 1914, 2429
Sau96I	GGNCC	5 cut(s)	719, 898, 1836, 2064, 2244
ScaI	AGTACT	1 cut(s)	922
SchI	GAGTC	6 cut(s)	83, 529, 1156, 1449, 1475, 1641
ScrFI	CCNGG	7 cut(s)	218, 321, 353, 760, 949, 983, 2062
SduI	GDGCHC	5 cut(s)	1080, 1155, 1266, 1665, 1982
SexAI	ACCWGGT	1 cut(s)	981
SfaNI	GCATC	5 cut(s)	1728, 1794, 1882, 2309, 2415
SfcI	CTRYAG	2 cut(s)	415, 1101
SinI	GGWCC	2 cut(s)	1836, 2064
SmiMI	CAYNNNNRTG	5 cut(s)	587, 999, 2081, 2262, 2345
SmlI	CTYRAG	3 cut(s)	425, 1475, 1713
SmoI	CTYRAG	3 cut(s)	425, 1475, 1713
SspMI	CTAG	7 cut(s)	257, 633, 1236, 1362, 1994, 2238, 2517
StyD4I	CCNGG	7 cut(s)	216, 319, 351, 758, 947, 981, 2060
StyI	CCWWGG	5 cut(s)	619, 1023, 1522, 1880, 2013
TaaI	ACNGT	4 cut(s)	131, 755, 920, 1967
TaiI	ACGT	6 cut(s)	215, 669, 1352, 1638, 1834, 2154
TatI	WGTACW	3 cut(s)	920, 1638, 2154
TauI	GCSGC	2 cut(s)	720, 1583
Tru1I	TTAA	2 cut(s)	114, 1064
Tru9I	TTAA	2 cut(s)	114, 1064
TscAI	CASTG	3 cut(s)	66, 1569, 2536
TseFI	GTSAC	5 cut(s)	52, 131, 1345, 1967, 2203
TseI	GCWGC	7 cut(s)	252, 614, 645, 648, 1568, 1913, 2428
Tsp45I	GTSAC	5 cut(s)	52, 131, 1345, 1967, 2203
TspGWI	ACGGA	2 cut(s)	1742, 2536
TspRI	CASTG	3 cut(s)	66, 1569, 2536
Tth111I	GACNNNGTC	1 cut(s)	1507
Van91I	CCANNNNNTGG	1 cut(s)	101
VpaK11BI	GGWCC	2 cut(s)	1836, 2064
XapI	RAATTY	4 cut(s)	293, 488, 2293, 2330
XbaI	TCTAGA	1 cut(s)	1361
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1324
XspI	CTAG	7 cut(s)	257, 633, 1236, 1362, 1994, 2238, 2517
ZraI	GACGTC	1 cut(s)	1350
ZrmI	AGTACT	1 cut(s)	922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.