Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

35515768 .. 35518450

Gene Structure 2683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g46640.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGGTGGCCGGAGATTCGTCAGCTACCTACAGTCGGGTTGCAAATGTCTCCATTGCTTGTGGCACTAATTTCACTGCGGAAATTAATTCAGAAGGTTGGAGCGGAGATGTCAATACGAAATTCACACCCATTGGTAGCACCACCTATGGCACAAGTCCTAACTATTCCTCTGGTTACTTAGAATGGCCGTACCAAGGAGTGCGGCTTTCTCACTCAGAATTTACTTACAGATTCAATCTCACCGCCGGCCAAAAGTTCATTCGCTTCTACTTCTACCCAGCTTCCTACACCAACTTCAACCGCTCCAAAGCTCTCTTCTCCGTCAAAGCCGGTGACTTTACCCTTCTTGACAACTTCAATGCTTCTGCCACTGCTGATGCCTCTGGGGTGGCGACGTTATACAAAGAATTCTGTTTAAACATTCACGAAGAACAGAGTCTAAAGACTTTCAACATCACATTCAGTCCAAGCAAAGATGCCTACGCGTTTATCAACGGTATTCAAGTCATGGAGATGCCAACCAATCTTTACTACTCTGCAGCAGAAAGCGCTGGGTATCGGTACGTCGGAGGCAGCCAACTCAAGTATCGCATCGAAAACAGCACTGCTCTGCAGACGCTCTACAGACTAGACATTGGTGGTGTAAACGGTGGTGGCGAAATAGGAATACGGTTTGGTGGTAAGACATACTTTGTTAGTTATGAAGTCCTGAACGTCTGGAATTCTTCAGATGAGGTGTACTTGGATGCTTTAAGTGAAACAATCAGCGTGCAATCATACAACGATAGAATCCAGCTCAATTTTTTTAAAGCTCCCGCGTACTCAGCAGAAGGAGAAATTTACCGTTCAGGCCGGTCATTGGGGATGAAGAAATACATCAACAAGAGCTACAATCTCACCTGGACATTTCCGGTAGATTCTTCATTCCACTACCTTCTGAGGCTGCATTTCTGTGAGTTTGAACCAGGTATTACCCAGTCCGGGGACAGAACATTTCAAATTATCATAGAGAACCAAGCAGTCGAAGAAGAAGCCGACATAATCGAATGGACTGGTGGAAATGGGATTCCAGTGTACAGAGACTACGTTGTGTACATGTCTGGCCCTGAGAATAAAATGAAGAGCTCATATAATGATGCACTCCTGAATGGGCTCGAAATCTTAAAACTATTTGGGTCGAATGTCTCATATACAGCAGCAGGAAATCCTGATTCACCGCAAGTGAAAAGACCAAAAAAGTCAAGTGAGTCAACTCTTTTGGTTGCCATTGTTGCTGGTGTAATTGCCAGCATAATTGTGTTCTCGGCGACCGGATTCTTGGTCTTCAGGCGAGGATGGAATGGTAAGGACTCAAGATCTAGCCACAGGGGAAAGAAGTCAATGAAGGTCCATAAGTCATCTACACCAACTTATTTCTGTCGTCGGTTTTCACTACCAGAGATCAAAGTCGCCACTGAAAACTTCAATGCTACTTCTATTATTGGAGTTGGAGGATTTGGCAATGTCTACAAAGGACAGATTGATGGTAAGGCAACCCTTGTCGCAATCAAGAAGCTGAAGCCAGATTCATCACAGGGTGCCCATGAGTTCAAGACGGAAATCGAATTGCTATCCCAAATCCGTCATCGCCATTTGGTGTCTTTGATTGGATATTGTAATGATAAAGGTGAGATGATCTTAATGTACGAGTACATGGCACGTGGGACAATCAGAGATCATCTCTACAACACTGAGAACCCACCTCTTCCTTGGAAAGAACGGCTTCAGATTTGTATTGGCGCAGCAAGAGGGTTGCAGTACCTCCATAGCGGTGTCAGGGGCACGATCATTCACCGTGACGTGAAGAGCACCAACATCTTATTGGATGAACACTGGGTGGCCAAGGTTTCAGATTTTGGGCTGTCAAAGGGCACGAATGACACGTCCAACACCCACATCAGCACTCTGGTGAAGGGCAGTTTCGGGTATCTGGATCCAGAATACTTCAGAACACAACATCTAACTCCTCAATCAGACGTCTACTCATTCGGTGTAGTGTTGTGTGAAGTATTGTGTGCGAGGCCAGCTGTGATAGATAGAGAGGATATTAGGCAAGCAAGCCTGGCTGAGTGGACCAAGAGCTGTCATCAGAATGGGGAACTCGATCAAATCATTGATCCAATTTTGAGAGGTAAGATTGCAGCCGAGTGCCTGGATAAGTATACTGAGGTAGCTATCAGTTGCATCCACGACAATGGAACAGAACGGCCATCCATGACCGATGTTGTTAGGGGGCTTGAGCTTGCCTTGCAGCTTCAGCGGAATACAGAAGGAAATATCAACAGCATTGAAAGGAATGTTCAAACTGAAACCACCAGTAGTGAGCAAAGCTGTGCCCCCAACGATTCCATTAAATGCATATCCCCGACAATCTTCTCTGAGGTTAACAACCCAAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

815

Amino Acids

90.61

Weight (kDa)

6.52

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	20 - 389	5.9e-21	Malectin-like domain
Malectin	PF11721	258 - 374	1.5e-09	Malectin domain
Pkinase	PF00069	489 - 756	2.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	491 - 758	2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2019
AccB1I	GGYRCC	1 cut(s)	1577
AccBSI	CCGCTC	2 cut(s)	102, 303
AccI	GTMKAC	3 cut(s)	1506, 2019, 2201
AccII	CGCG	2 cut(s)	485, 818
AciI	CCGC	9 cut(s)	77, 102, 202, 243, 301, 816, 1217, 1809, 2299
AclWI	GGATC	3 cut(s)	1967, 1980, 2150
AcoI	YGGCCR	5 cut(s)	6, 185, 247, 1878, 2246
AcsI	RAATTY	5 cut(s)	119, 218, 407, 721, 837
AcuI	CTGAAG	6 cut(s)	711, 1309, 1577, 1748, 1969, 2279
AcvI	CACGTG	1 cut(s)	1700
AcyI	GRCGYC	1 cut(s)	2016
AdeI	CACNNNGTG	2 cut(s)	1577, 1876
AfaI	GTAC	9 cut(s)	191, 563, 740, 821, 1076, 1094, 1685, 1691, 1799
AfeI	AGCGCT	1 cut(s)	550
AfiI	CCNNNNNNNGG	5 cut(s)	33, 194, 859, 981, 982
AflIII	ACRYGT	3 cut(s)	483, 1095, 1920
AjiI	CACGTC	2 cut(s)	1840, 1923
AjnI	CCWGG	4 cut(s)	899, 964, 2100, 2190
AjuI	GAANNNNNNNTTGG	4 cut(s)	243, 275, 299, 331
AleI	CACNNNNGTG	1 cut(s)	1946
Alw21I	GWGCWC	2 cut(s)	1127, 1850
Alw26I	GTCTC	3 cut(s)	52, 1074, 1189
AlwI	GGATC	3 cut(s)	1967, 1980, 2150
Aor51HI	AGCGCT	1 cut(s)	550
AoxI	GGCC	8 cut(s)	6, 185, 247, 850, 1102, 1878, 2060, 2246
ApeKI	GCWGC	7 cut(s)	539, 573, 943, 1196, 1781, 2180, 2290
ApoI	RAATTY	5 cut(s)	119, 218, 407, 721, 837
ArsI	GACNNNNNNTTYG	2 cut(s)	1907, 1939
AseI	ATTAAT	1 cut(s)	84
Asp700I	GAANNNNTTC	1 cut(s)	1761
AspLEI	GCGC	2 cut(s)	551, 1781
AspS9I	GGNCC	3 cut(s)	1103, 1387, 2112
AsuC2I	CCSGG	1 cut(s)	982
AsuHPI	GGTGA	7 cut(s)	232, 344, 889, 1206, 1679, 1823, 1960
AvaII	GGWCC	2 cut(s)	1387, 2112
BaeGI	GKGCMC	4 cut(s)	1582, 1823, 1913, 2377
BaeI	ACNNNNGTAYC	2 cut(s)	569, 602
BalI	TGGCCA	1 cut(s)	1880
BamHI	GGATCC	1 cut(s)	1972
BanI	GGYRCC	1 cut(s)	1577
BanII	GRGCYC	2 cut(s)	1127, 1155
BbrPI	CACGTG	1 cut(s)	1700
BbsI	GAAGAC	1 cut(s)	1315
Bbv12I	GWGCWC	2 cut(s)	1127, 1850
BbvI	GCAGC	7 cut(s)	551, 585, 930, 1208, 1793, 2192, 2302
BccI	CCATC	3 cut(s)	1329, 1517, 2257
BceAI	ACGGC	3 cut(s)	172, 1775, 2261
BciT130I	CCWGG	4 cut(s)	901, 966, 2102, 2192
BcnI	CCSGG	1 cut(s)	982
BcoDI	GTCTC	3 cut(s)	52, 1074, 1189
BfaI	CTAG	2 cut(s)	629, 1359
BfmI	CTRYAG	4 cut(s)	28, 537, 611, 622
BfoI	RGCGCY	1 cut(s)	552
BglII	AGATCT	1 cut(s)	1355
BisI	GCNGC	8 cut(s)	203, 540, 574, 944, 1197, 1782, 2181, 2291
BlsI	GCNGC	8 cut(s)	204, 541, 575, 945, 1198, 1783, 2182, 2292
Bme1390I	CCNGG	5 cut(s)	901, 966, 982, 2102, 2192
Bme18I	GGWCC	2 cut(s)	1387, 2112
BmgBI	CACGTC	2 cut(s)	1840, 1923
BmgT120I	GGNCC	3 cut(s)	1103, 1387, 2112
BmiI	GGNNCC	2 cut(s)	1579, 1974
BmrFI	CCNGG	5 cut(s)	901, 966, 982, 2102, 2192
BmrI	ACTGGG	2 cut(s)	970, 1882
BmsI	GCATC	7 cut(s)	367, 466, 504, 600, 736, 1126, 2232
BmuI	ACTGGG	2 cut(s)	970, 1882
BpiI	GAAGAC	1 cut(s)	1315
BplI	GAGNNNNNCTC	2 cut(s)	1704, 1736
BpuEI	CTTGAG	3 cut(s)	566, 1336, 2297
BpuMI	CCSGG	1 cut(s)	982
BsaAI	YACGTR	1 cut(s)	1700
BsaHI	GRCGYC	1 cut(s)	2016
BsaJI	CCNNGG	4 cut(s)	193, 981, 1748, 1881
BsaWI	WCCGGW	2 cut(s)	910, 1310
Bsc4I	CCNNNNNNNGG	5 cut(s)	33, 194, 859, 981, 982
Bse118I	RCCGGY	3 cut(s)	245, 329, 852
Bse1I	ACTGG	5 cut(s)	976, 1057, 1070, 1877, 2355
Bse3DI	GCAATG	2 cut(s)	51, 1507
BseBI	CCWGG	4 cut(s)	901, 966, 2102, 2192
BseDI	CCNNGG	4 cut(s)	193, 981, 1748, 1881
BseGI	GGATG	6 cut(s)	751, 870, 1340, 1870, 2223, 2249
BseLI	CCNNNNNNNGG	5 cut(s)	33, 194, 859, 981, 982
BseMI	GCAATG	2 cut(s)	51, 1507
BseMII	CTCAG	8 cut(s)	228, 837, 929, 1098, 1722, 2097, 2196, 2409
BseNI	ACTGG	5 cut(s)	976, 1057, 1070, 1877, 2355
BseRI	GAGGAG	1 cut(s)	1995
BseSI	GKGCMC	4 cut(s)	1582, 1823, 1913, 2377
BseXI	GCAGC	7 cut(s)	551, 585, 930, 1208, 1793, 2192, 2302
BseYI	CCCAGC	2 cut(s)	277, 551
Bsh1236I	CGCG	2 cut(s)	485, 818
Bsh1285I	CGRYCG	1 cut(s)	1311
BshFI	GGCC	8 cut(s)	8, 187, 249, 852, 1104, 1880, 2062, 2248
BshNI	GGYRCC	1 cut(s)	1577
BsiEI	CGRYCG	1 cut(s)	1311
BsiHKAI	GWGCWC	2 cut(s)	1127, 1850
BsiSI	CCGG	7 cut(s)	9, 246, 330, 853, 911, 981, 1311
BslFI	GGGAC	2 cut(s)	998, 1717
BslI	CCNNNNNNNGG	5 cut(s)	33, 194, 859, 981, 982
BsmAI	GTCTC	3 cut(s)	52, 1074, 1189
BsmFI	GGGAC	2 cut(s)	998, 1717
BsnI	GGCC	8 cut(s)	8, 187, 249, 852, 1104, 1880, 2062, 2248
Bsp1286I	GDGCHC	7 cut(s)	1127, 1155, 1582, 1823, 1850, 1913, 2377
Bsp1407I	TGTACA	2 cut(s)	1074, 1092
Bsp143I	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
BspACI	CCGC	9 cut(s)	77, 102, 202, 243, 301, 816, 1217, 1809, 2299
BspANI	GGCC	8 cut(s)	8, 187, 249, 852, 1104, 1880, 2062, 2248
BspCNI	CTCAG	8 cut(s)	227, 836, 930, 1099, 1723, 2098, 2197, 2410
BspFNI	CGCG	2 cut(s)	485, 818
BspLI	GGNNCC	2 cut(s)	1579, 1974
BspMAI	CTGCAG	2 cut(s)	541, 615
BspPI	GGATC	3 cut(s)	1967, 1980, 2150
BspQI	GCTCTTC	2 cut(s)	1115, 1838
BspT107I	GGYRCC	1 cut(s)	1577
BsrBI	CCGCTC	2 cut(s)	102, 303
BsrDI	GCAATG	2 cut(s)	51, 1507
BsrFI	RCCGGY	3 cut(s)	245, 329, 852
BsrGI	TGTACA	2 cut(s)	1074, 1092
BsrI	ACTGG	5 cut(s)	976, 1057, 1070, 1877, 2355
BssAI	RCCGGY	3 cut(s)	245, 329, 852
BssECI	CCNNGG	4 cut(s)	193, 981, 1748, 1881
BssMI	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
BssNAI	GTATAC	1 cut(s)	2202
BssNI	GRCGYC	1 cut(s)	2016
BssT1I	CCWWGG	3 cut(s)	193, 1748, 1881
Bst1107I	GTATAC	1 cut(s)	2202
Bst2UI	CCWGG	4 cut(s)	901, 966, 2102, 2192
Bst4CI	ACNGT	6 cut(s)	32, 497, 650, 672, 845, 1835
Bst6I	CTCTTC	4 cut(s)	320, 1115, 1749, 1838
BstACI	GRCGYC	1 cut(s)	2016
BstAUI	TGTACA	2 cut(s)	1074, 1092
BstBAI	YACGTR	1 cut(s)	1700
BstC8I	GCNNGC	7 cut(s)	247, 770, 1288, 2064, 2094, 2098, 2283
BstDEI	CTNAG	9 cut(s)	178, 214, 823, 938, 1107, 1731, 2106, 2205, 2418
BstF5I	GGATG	6 cut(s)	751, 870, 1340, 1870, 2223, 2249
BstFNI	CGCG	2 cut(s)	485, 818
BstH2I	RGCGCY	1 cut(s)	552
BstHHI	GCGC	2 cut(s)	551, 1781
BstKTI	GATC	8 cut(s)	1358, 1443, 1677, 1717, 1827, 1975, 2146, 2158
BstMAI	GTCTC	3 cut(s)	52, 1074, 1189
BstMBI	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
BstMCI	CGRYCG	1 cut(s)	1311
BstMWI	GCNNNNNNNGC	7 cut(s)	548, 824, 1271, 2063, 2102, 2287, 2296
BstNI	CCWGG	4 cut(s)	901, 966, 2102, 2192
BstNSI	RCATGY	1 cut(s)	1099
BstSCI	CCNGG	5 cut(s)	899, 964, 980, 2100, 2190
BstSFI	CTRYAG	4 cut(s)	28, 537, 611, 622
BstSLI	GKGCMC	4 cut(s)	1582, 1823, 1913, 2377
BstUI	CGCG	2 cut(s)	485, 818
BstV1I	GCAGC	7 cut(s)	551, 585, 930, 1208, 1793, 2192, 2302
BstV2I	GAAGAC	1 cut(s)	1315
BstX2I	RGATCY	2 cut(s)	1355, 1972
BstXI	CCANNNNNNTGG	1 cut(s)	2234
BstYI	RGATCY	2 cut(s)	1355, 1972
BstZ17I	GTATAC	1 cut(s)	2202
BsuRI	GGCC	8 cut(s)	8, 187, 249, 852, 1104, 1880, 2062, 2248
BtgZI	GCGATG	1 cut(s)	1610
BtrI	CACGTC	2 cut(s)	1840, 1923
BtsCI	GGATG	6 cut(s)	751, 870, 1340, 1870, 2223, 2249
BtsI	GCAGTG	3 cut(s)	72, 369, 603
BtsIMutI	CAGTG	7 cut(s)	72, 369, 603, 1077, 1452, 1728, 1870
Cac8I	GCNNGC	7 cut(s)	247, 770, 1288, 2064, 2094, 2098, 2283
CfoI	GCGC	2 cut(s)	551, 1781
Cfr10I	RCCGGY	3 cut(s)	245, 329, 852
Cfr13I	GGNCC	3 cut(s)	1103, 1387, 2112
CseI	GACGC	1 cut(s)	625
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	9 cut(s)	190, 562, 739, 820, 1075, 1093, 1684, 1690, 1798
CspCI	CAANNNNNGTGG	1 cut(s)	2416
CviAII	CATG	5 cut(s)	508, 1096, 1583, 1693, 2254
CviQI	GTAC	9 cut(s)	190, 562, 739, 820, 1075, 1093, 1684, 1690, 1798
DdeI	CTNAG	9 cut(s)	178, 214, 823, 938, 1107, 1731, 2106, 2205, 2418
DpnI	GATC	8 cut(s)	1357, 1442, 1676, 1716, 1826, 1974, 2145, 2157
DpnII	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
DraI	TTTAAA	2 cut(s)	417, 808
DraIII	CACNNNGTG	2 cut(s)	1577, 1876
EaeI	YGGCCR	5 cut(s)	6, 185, 247, 1878, 2246
Eam1104I	CTCTTC	4 cut(s)	320, 1115, 1749, 1838
EarI	CTCTTC	4 cut(s)	320, 1115, 1749, 1838
Ecl136II	GAGCTC	1 cut(s)	1125
Eco130I	CCWWGG	3 cut(s)	193, 1748, 1881
Eco24I	GRGCYC	2 cut(s)	1127, 1155
Eco47I	GGWCC	2 cut(s)	1387, 2112
Eco47III	AGCGCT	1 cut(s)	550
Eco53kI	GAGCTC	1 cut(s)	1125
Eco57I	CTGAAG	6 cut(s)	711, 1309, 1577, 1748, 1969, 2279
Eco72I	CACGTG	1 cut(s)	1700
EcoICRI	GAGCTC	1 cut(s)	1125
EcoRI	GAATTC	2 cut(s)	407, 721
EcoRII	CCWGG	4 cut(s)	899, 964, 2100, 2190
EcoT14I	CCWWGG	3 cut(s)	193, 1748, 1881
EcoT22I	ATGCAT	1 cut(s)	2399
EcoT38I	GRGCYC	2 cut(s)	1127, 1155
ErhI	CCWWGG	3 cut(s)	193, 1748, 1881
FaeI	CATG	5 cut(s)	511, 1099, 1586, 1696, 2257
FalI	AAGNNNNNCTT	4 cut(s)	674, 706, 1746, 1778
FaqI	GGGAC	2 cut(s)	998, 1717
FatI	CATG	5 cut(s)	507, 1095, 1582, 1692, 2253
FauI	CCCGC	1 cut(s)	823
FblI	GTMKAC	3 cut(s)	1506, 2019, 2201
Fnu4HI	GCNGC	8 cut(s)	203, 540, 574, 944, 1197, 1782, 2181, 2291
FokI	GGATG	6 cut(s)	758, 877, 1347, 1877, 2210, 2236
FriOI	GRGCYC	2 cut(s)	1127, 1155
Fsp4HI	GCNGC	8 cut(s)	203, 540, 574, 944, 1197, 1782, 2181, 2291
FspBI	CTAG	2 cut(s)	629, 1359
GlaI	GCGC	2 cut(s)	550, 1780
GluI	GCNGC	8 cut(s)	203, 540, 574, 944, 1197, 1782, 2181, 2291
GsaI	CCCAGC	2 cut(s)	281, 555
HaeII	RGCGCY	1 cut(s)	552
HaeIII	GGCC	8 cut(s)	8, 187, 249, 852, 1104, 1880, 2062, 2248
HapII	CCGG	7 cut(s)	9, 246, 330, 853, 911, 981, 1311
HgaI	GACGC	1 cut(s)	625
HhaI	GCGC	2 cut(s)	551, 1781
Hin1I	GRCGYC	1 cut(s)	2016
Hin1II	CATG	5 cut(s)	511, 1099, 1586, 1696, 2257
Hin6I	GCGC	2 cut(s)	549, 1779
HinP1I	GCGC	2 cut(s)	549, 1779
HincII	GTYRAC	2 cut(s)	1251, 2425
HindII	GTYRAC	2 cut(s)	1251, 2425
HpaI	GTTAAC	1 cut(s)	2425
HpaII	CCGG	7 cut(s)	9, 246, 330, 853, 911, 981, 1311
HphI	GGTGA	7 cut(s)	232, 344, 889, 1206, 1679, 1823, 1960
Hpy99I	CGWCG	3 cut(s)	397, 569, 1425
HpyAV	CCTTC	7 cut(s)	86, 353, 824, 944, 1378, 1945, 2303
HpyCH4III	ACNGT	6 cut(s)	32, 497, 650, 672, 845, 1835
HpyCH4IV	ACGT	8 cut(s)	395, 564, 714, 1086, 1699, 1839, 1922, 2016
HpyF10VI	GCNNNNNNNGC	7 cut(s)	548, 824, 1271, 2063, 2102, 2287, 2296
HpyF3I	CTNAG	9 cut(s)	178, 214, 823, 938, 1107, 1731, 2106, 2205, 2418
HpySE526I	ACGT	8 cut(s)	395, 564, 714, 1086, 1699, 1839, 1922, 2016
Hsp92I	GRCGYC	1 cut(s)	2016
Hsp92II	CATG	5 cut(s)	511, 1099, 1586, 1696, 2257
HspAI	GCGC	2 cut(s)	549, 1779
KroI	GCCGGC	1 cut(s)	245
KroNI	GCCGGC	1 cut(s)	247
KspAI	GTTAAC	1 cut(s)	2425
Kzo9I	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
LguI	GCTCTTC	2 cut(s)	1115, 1838
LmnI	GCTCC	3 cut(s)	99, 308, 817
Lsp1109I	GCAGC	7 cut(s)	551, 585, 930, 1208, 1793, 2192, 2302
LweI	GCATC	7 cut(s)	367, 466, 504, 600, 736, 1126, 2232
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	2 cut(s)	629, 1359
MaeII	ACGT	8 cut(s)	395, 564, 714, 1086, 1699, 1839, 1922, 2016
MaeIII	GTNAC	3 cut(s)	173, 332, 1835
MalI	GATC	8 cut(s)	1357, 1442, 1676, 1716, 1826, 1974, 2145, 2157
MbiI	CCGCTC	2 cut(s)	102, 303
MboI	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
MflI	RGATCY	2 cut(s)	1355, 1972
MhlI	GDGCHC	7 cut(s)	1127, 1155, 1582, 1823, 1850, 1913, 2377
MlsI	TGGCCA	1 cut(s)	1880
MluI	ACGCGT	1 cut(s)	483
MluNI	TGGCCA	1 cut(s)	1880
MlyI	GAGTC	3 cut(s)	445, 1256, 1343
MmeI	TCCRAC	4 cut(s)	77, 547, 1468, 1950
Mox20I	TGGCCA	1 cut(s)	1880
Mph1103I	ATGCAT	1 cut(s)	2399
MroNI	GCCGGC	1 cut(s)	245
MroXI	GAANNNNTTC	1 cut(s)	1761
MscI	TGGCCA	1 cut(s)	1880
MseI	TTAA	8 cut(s)	84, 416, 752, 807, 1163, 1679, 2391, 2424
MslI	CAYNNNNRTG	7 cut(s)	512, 951, 1295, 1809, 1946, 2130, 2232
Msp20I	TGGCCA	1 cut(s)	1880
MspA1I	CMGCKG	2 cut(s)	2066, 2299
MspI	CCGG	7 cut(s)	9, 246, 330, 853, 911, 981, 1311
MspR9I	CCNGG	5 cut(s)	901, 966, 982, 2102, 2192
MssI	GTTTAAAC	1 cut(s)	417
MvaI	CCWGG	4 cut(s)	901, 966, 2102, 2192
MvnI	CGCG	2 cut(s)	485, 818
MwoI	GCNNNNNNNGC	7 cut(s)	548, 824, 1271, 2063, 2102, 2287, 2296
NaeI	GCCGGC	1 cut(s)	247
NciI	CCSGG	1 cut(s)	982
NdeII	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
NgoMIV	GCCGGC	1 cut(s)	245
NlaIII	CATG	5 cut(s)	511, 1099, 1586, 1696, 2257
NlaIV	GGNNCC	2 cut(s)	1579, 1974
NmeAIII	GCCGAG	2 cut(s)	1283, 2209
NmuCI	GTSAC	2 cut(s)	332, 1835
NsiI	ATGCAT	1 cut(s)	2399
NspI	RCATGY	1 cut(s)	1099
OliI	CACNNNNGTG	1 cut(s)	1946
PciI	ACATGT	1 cut(s)	1095
PciSI	GCTCTTC	2 cut(s)	1115, 1838
PcsI	WCGNNNNNNNCGW	2 cut(s)	654, 1919
PdiI	GCCGGC	1 cut(s)	247
PdmI	GAANNNNTTC	1 cut(s)	1761
PfeI	GAWTC	9 cut(s)	14, 231, 789, 917, 1066, 1211, 1314, 1565, 2384
PkrI	GCNGC	8 cut(s)	204, 541, 575, 945, 1198, 1783, 2182, 2292
PleI	GAGTC	3 cut(s)	444, 1255, 1343
PmaCI	CACGTG	1 cut(s)	1700
PmeI	GTTTAAAC	1 cut(s)	417
PmlI	CACGTG	1 cut(s)	1700
PpsI	GAGTC	3 cut(s)	444, 1255, 1343
Ppu21I	YACGTR	1 cut(s)	1700
PscI	ACATGT	1 cut(s)	1095
PshBI	ATTAAT	1 cut(s)	84
Psp124BI	GAGCTC	1 cut(s)	1127
Psp6I	CCWGG	4 cut(s)	899, 964, 2100, 2190
PspCI	CACGTG	1 cut(s)	1700
PspFI	CCCAGC	2 cut(s)	277, 551
PspGI	CCWGG	4 cut(s)	899, 964, 2100, 2190
PspN4I	GGNNCC	2 cut(s)	1579, 1974
PspPI	GGNCC	3 cut(s)	1103, 1387, 2112
PstI	CTGCAG	2 cut(s)	541, 615
PsuI	RGATCY	2 cut(s)	1355, 1972
PvuII	CAGCTG	1 cut(s)	2066
RsaI	GTAC	9 cut(s)	191, 563, 740, 821, 1076, 1094, 1685, 1691, 1799
RsaNI	GTAC	9 cut(s)	190, 562, 739, 820, 1075, 1093, 1684, 1690, 1798
RseI	CAYNNNNRTG	7 cut(s)	512, 951, 1295, 1809, 1946, 2130, 2232
SacI	GAGCTC	1 cut(s)	1127
SapI	GCTCTTC	2 cut(s)	1115, 1838
SaqAI	TTAA	8 cut(s)	84, 416, 752, 807, 1163, 1679, 2391, 2424
SatI	GCNGC	8 cut(s)	203, 540, 574, 944, 1197, 1782, 2181, 2291
Sau3AI	GATC	8 cut(s)	1355, 1440, 1674, 1714, 1824, 1972, 2143, 2155
Sau96I	GGNCC	3 cut(s)	1103, 1387, 2112
SchI	GAGTC	3 cut(s)	445, 1256, 1343
ScrFI	CCNGG	5 cut(s)	901, 966, 982, 2102, 2192
SduI	GDGCHC	7 cut(s)	1127, 1155, 1582, 1823, 1850, 1913, 2377
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	7 cut(s)	367, 466, 504, 600, 736, 1126, 2232
SfcI	CTRYAG	4 cut(s)	28, 537, 611, 622
SinI	GGWCC	2 cut(s)	1387, 2112
SmiMI	CAYNNNNRTG	7 cut(s)	512, 951, 1295, 1809, 1946, 2130, 2232
SmlI	CTYRAG	3 cut(s)	581, 1351, 2276
SmoI	CTYRAG	3 cut(s)	581, 1351, 2276
SsiI	CCGC	9 cut(s)	77, 102, 202, 243, 301, 816, 1217, 1809, 2299
SspMI	CTAG	2 cut(s)	629, 1359
SstI	GAGCTC	1 cut(s)	1127
StyD4I	CCNGG	5 cut(s)	899, 964, 980, 2100, 2190
StyI	CCWWGG	3 cut(s)	193, 1748, 1881
TaaI	ACNGT	6 cut(s)	32, 497, 650, 672, 845, 1835
TaiI	ACGT	8 cut(s)	398, 567, 717, 1089, 1702, 1842, 1925, 2019
TaqI	TCGA	7 cut(s)	594, 1023, 1044, 1155, 1178, 1602, 2142
TaqII	GACCGA	1 cut(s)	2273
TatI	WGTACW	4 cut(s)	738, 1074, 1092, 1689
TauI	GCSGC	1 cut(s)	205
TfiI	GAWTC	9 cut(s)	14, 231, 789, 917, 1066, 1211, 1314, 1565, 2384
Tru1I	TTAA	8 cut(s)	84, 416, 752, 807, 1163, 1679, 2391, 2424
Tru9I	TTAA	8 cut(s)	84, 416, 752, 807, 1163, 1679, 2391, 2424
TscAI	CASTG	7 cut(s)	79, 376, 610, 1077, 1459, 1735, 1877
TseFI	GTSAC	2 cut(s)	332, 1835
TseI	GCWGC	7 cut(s)	539, 573, 943, 1196, 1781, 2180, 2290
Tsp45I	GTSAC	2 cut(s)	332, 1835
TspDTI	ATGAA	8 cut(s)	247, 717, 881, 912, 1133, 1397, 1557, 1881
TspGWI	ACGGA	3 cut(s)	310, 1610, 1610
TspRI	CASTG	7 cut(s)	79, 376, 610, 1077, 1459, 1735, 1877
VpaK11BI	GGWCC	2 cut(s)	1387, 2112
VspI	ATTAAT	1 cut(s)	84
XapI	RAATTY	5 cut(s)	119, 218, 407, 721, 837
XceI	RCATGY	1 cut(s)	1099
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1746, 1858
XmiI	GTMKAC	3 cut(s)	1506, 2019, 2201
XmnI	GAANNNNTTC	1 cut(s)	1761
XspI	CTAG	2 cut(s)	629, 1359
ZraI	GACGTC	1 cut(s)	2017
Zsp2I	ATGCAT	1 cut(s)	2399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.