Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

35512465 .. 35514990

Gene Structure 2526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g46620.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGATACCAGTTCTTGGTCCTCTCTGCCTTTGCCTTCTTCTCCACATCGTCGCCCAACTTGTGGCCGGTGATTCACAACTTATCTACACTCCAGTTGAAGATATAACCATTGCCTGTGGCGAATCCGGCACCCAAATCAGTAAGTTTGATAACCGAACTTGGAACACAGATATCAATTCAGAATTCTTCCCAATGGAACAAGACCAAGTTGGTAACAGTACATCCCAAGTCAGAAAAGCACCATCATCGTCCTTCACAGGCAGAGTACCCTACACCACCGCGAGGCTTTCTCACTCCGAATTCACTTACACATTTACGTTAACTACTGGCCAAAAGTTCATACGCTTGTACTTCTACCATGCTTCGTATGCTGACTTTGATCGCTCCAAAGCCTTGTTTTCCGTCAAAGCTGGCGGCTATACTCTTCTACAAGACTTCAATGCTTCAGCCACTGTGGATGCTTCTGGGGTGGAGACGATATACAAGGAGTTCTGCTTGAACATATATGGTGGAGATCAGAGTCTAAACATCACATTCATTCCAAGCAAAGCCGAGCAGGCATACGCCTTTATCAACGGAATCGAGATTGTGTCCATGCCGACTTATCTTTACTACACCGCACCTCAAAGCAACGGGCCTGCTTATATAGGCGAGGAAGGCAACTTTCCAATTGGGGAAAACACTGCTATGGAGATGTTTTACAGAATCAACATTGGTGGCAGCCCCGTCTCATCCAATCAAGACACTGGAATGTACCGGAATTGGGATGGTGAGGATGAAACCTACTTGGATGAATCAAGTAGAAATATAACTGTTTCACCATCCAATCCAAGCATTCAACTCAAGTTTGGCAGAATACCTGAATACAGTGCGCCGAAAGAAGTTTACAAAACAGGCCGGTCAATTGACACCAACAAGACAAACAACAGGAGCTACAATCTCACCTGGGAATTTCATGTAGATTCTAACTATCCTTACCTGGTTAGGCTGCATTTTTGTGAGATCGAAATTTTCAAGATAGGAGGAGAGCGGACTTTTGTAATTTACATAGGCAATCAAGCCGTTGATACAGCAGACATAGTCGGATGGAGTGGTGGAAATGGGATACCAGTATACAGAGACTACGTGGTTGCCTTGTCTGACCTGGGAAGGCAGAAGAAAGTAAGTCTATTTATCACGCTGCAAGCATTCCAAATGGACTGGACGATTGAATACAACAATGCAATTCTGAACGGGCTTGAAATTTTGAAACTGATCAACTCAAAAGACCAGCAAACCGGAAGTAGCACCAACCCGAAGGTGACACTGCTAAGCCCAAGAACTTCAAAGAATTCAACTCATATGCTGGTCATCGTTGCTGGTGTAATTTCCAGCATAGTAGTATTCTCTGCATTTGGAATCTTCGTTTTCAGGCAAAGACAGAAAGTTTCCGGCAACAGCCACAGTACAATGAAATTAACAATGACCCCCAGCTCATCTTCACCGTCTTATTTGTGTCGTTACTTCTCACTGGCAGAGATCAAAGCCGCCACCAAGAACTTCCATCAAACTTCAGTTATTGGTGTTGGAGGATTCGGCAATGTGTACAAGGGATGCATTGATGGTGGAGCCACTCCTGTTGCAATTAAACGACTGAAACCAGAGTCATCCCAGGGTGCCCATGAGTTCAAGACAGAAATTGAGTTGCTCTCCCAACTTCGTCATCGCCATTTGGTTTCACTCATTGGATACTGTACTGATAAAGGTGAGATGATCCTGGTATATGATTACATGGCTCGAGGATCCCTCCGTGATCATCTCTATCACACCAATAACTCAACTCTTTCTTGGGATCAACGGCTTCAGATTTGTATTGGCACGGCTCAAGGGCTACAATACCTTCATGGCGGTGCCAAGGGAACCATCATTCACCGTGACGTGAAGAGCACAAACATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCAGATTTTGGGTTGTCAAAAGTGGGGAGCGCCAACATGTCCAAGACTCACATAAGCACGGTAGTGAAGGGTAGCTTCGGGTATCTAGACCCAGAATACTACCGACGCCAAAGATTAACTGAGAAGTCTGATGTCTACTCATTTGGTGTAGTTTTGTTTGAGGTACTATGTGCAAGGCCAGCTGTGATAAATACAGAGGAGATGAGGCAAATGAACTTATCTGAGTGGGCCAAAAGTTGTCTTCACAAGGGGGAACTTGATCAAATCATCGACCCAAGCTTAACAGGTAAAATCGCAACGGAGAGCTTAAATAAGTTTGTTGAGATTGCAATGAGCTGTGTGCATGAAAATGGTGTTGAAAGGCCGTCGATGGATGATGTTCTCAGGGGGCTTGAGTTTGCATTGCAGATTCATCATAGCCCAGAGAAGGATATCAACTCCATTGAAAGAAAGGTAAAAACTGAACCAAGTAGTCGAGAACCAAGTTGTGCAACCAAGGATTCCATTACATGTATATCTGAGACAATCTTCTCTGAGATCAACAATCCAAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

842

Amino Acids

93.69

Weight (kDa)

6.31

Isoelectric Point (pI)

43.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	36 - 179	3.4e-06	Malectin domain
Malectin_like	PF12819	49 - 417	4.3e-26	Malectin-like domain
Malectin	PF11721	234 - 376	3.8e-08	Malectin domain
Pkinase	PF00069	514 - 783	3.1e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	516 - 784	1e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	128, 1655, 1889
AccB7I	CCANNNNNTGG	2 cut(s)	14, 61
AccBSI	CCGCTC	1 cut(s)	1030
AccI	GTMKAC	2 cut(s)	1113, 2100
AccII	CGCG	1 cut(s)	281
AciI	CCGC	6 cut(s)	279, 414, 618, 1030, 1527, 1887
AclWI	GGATC	4 cut(s)	1747, 1776, 1789, 1839
AcoI	YGGCCR	3 cut(s)	63, 328, 1956
AcsI	RAATTY	6 cut(s)	182, 299, 950, 1008, 1242, 1330
AcuI	CTGAAG	3 cut(s)	429, 1536, 1826
AcyI	GRCGYC	1 cut(s)	2071
AfaI	GTAC	8 cut(s)	220, 267, 350, 755, 1447, 1586, 1735, 2130
AfiI	CCNNNNNNNGG	5 cut(s)	14, 61, 282, 763, 2392
AflIII	ACRYGT	2 cut(s)	2001, 2474
AjiI	CACGTC	1 cut(s)	1918
AjnI	CCWGG	5 cut(s)	944, 978, 1143, 1650, 1755
AleI	CACNNNNGTG	1 cut(s)	2027
AluBI	AGCT	8 cut(s)	410, 933, 1473, 2040, 2147, 2244, 2271, 2301
AluI	AGCT	8 cut(s)	410, 933, 1473, 2040, 2147, 2244, 2271, 2301
Alw21I	GWGCWC	1 cut(s)	1928
Alw26I	GTCTC	4 cut(s)	467, 733, 1113, 2480
AlwI	GGATC	4 cut(s)	1747, 1776, 1789, 1839
AlwNI	CAGNNNCTG	1 cut(s)	452
Ama87I	CYCGRG	1 cut(s)	1776
AoxI	GGCC	8 cut(s)	63, 328, 635, 895, 1956, 2141, 2193, 2327
ApeKI	GCWGC	3 cut(s)	720, 988, 1180
ApoI	RAATTY	6 cut(s)	182, 299, 950, 1008, 1242, 1330
AspLEI	GCGC	2 cut(s)	874, 1997
AspS9I	GGNCC	3 cut(s)	17, 635, 2193
AsuHPI	GGTGA	8 cut(s)	80, 782, 810, 934, 1312, 1473, 1757, 1901
AvaI	CYCGRG	1 cut(s)	1776
AvaII	GGWCC	1 cut(s)	17
BaeGI	GKGCMC	1 cut(s)	1660
BalI	TGGCCA	2 cut(s)	330, 1958
BamHI	GGATCC	1 cut(s)	1781
BanI	GGYRCC	3 cut(s)	128, 1655, 1889
BbsI	GAAGAC	1 cut(s)	2198
Bbv12I	GWGCWC	1 cut(s)	1928
BbvI	GCAGC	3 cut(s)	732, 975, 1167
BccI	CCATC	8 cut(s)	250, 761, 829, 1080, 1551, 1595, 1910, 2329
BceAI	ACGGC	4 cut(s)	1046, 1853, 1875, 2314
BcgI	CGANNNNNNTGC	2 cut(s)	228, 262
BciT130I	CCWGG	5 cut(s)	946, 980, 1145, 1652, 1757
BciVI	GTATCC	2 cut(s)	1098, 1721
BclI	TGATCA	3 cut(s)	1254, 1792, 2224
BcoDI	GTCTC	4 cut(s)	467, 733, 1113, 2480
BfaI	CTAG	1 cut(s)	2051
BfoI	RGCGCY	1 cut(s)	1998
BfuI	GTATCC	2 cut(s)	1098, 1721
BglI	GCCNNNNNGGC	1 cut(s)	557
BisI	GCNGC	5 cut(s)	415, 721, 989, 1181, 1527
BlpI	GCTNAGC	1 cut(s)	1310
BlsI	GCNGC	5 cut(s)	416, 722, 990, 1182, 1528
Bme1390I	CCNGG	5 cut(s)	946, 980, 1145, 1652, 1757
Bme18I	GGWCC	1 cut(s)	17
BmeT110I	CYCGRG	1 cut(s)	1776
BmgBI	CACGTC	1 cut(s)	1918
BmgT120I	GGNCC	3 cut(s)	17, 635, 2193
BmiI	GGNNCC	6 cut(s)	130, 1609, 1657, 1783, 1891, 1900
BmrFI	CCNGG	5 cut(s)	946, 980, 1145, 1652, 1757
BmsI	GCATC	2 cut(s)	448, 1583
BpiI	GAAGAC	1 cut(s)	2198
BplI	GAGNNNNNCTC	6 cut(s)	274, 306, 1673, 1705, 1770, 1802
BpmI	CTGGAG	1 cut(s)	75
Bpu1102I	GCTNAGC	1 cut(s)	1310
BpuEI	CTTGAG	3 cut(s)	827, 1848, 2378
BsaAI	YACGTR	1 cut(s)	1126
BsaHI	GRCGYC	1 cut(s)	2071
BsaJI	CCNNGG	7 cut(s)	945, 1144, 1650, 1651, 1893, 1959, 2460
BsaWI	WCCGGW	2 cut(s)	756, 1277
Bsc4I	CCNNNNNNNGG	5 cut(s)	14, 61, 282, 763, 2392
Bse118I	RCCGGY	2 cut(s)	65, 897
Bse1I	ACTGG	7 cut(s)	8, 92, 331, 751, 1109, 1205, 1515
Bse3DI	GCAATG	4 cut(s)	108, 1585, 2301, 2366
BseBI	CCWGG	5 cut(s)	946, 980, 1145, 1652, 1757
BseDI	CCNNGG	7 cut(s)	945, 1144, 1650, 1651, 1893, 1959, 2460
BseLI	CCNNNNNNNGG	5 cut(s)	14, 61, 282, 763, 2392
BseMI	GCAATG	4 cut(s)	108, 1585, 2301, 2366
BseMII	CTCAG	5 cut(s)	2076, 2178, 2362, 2475, 2490
BseNI	ACTGG	7 cut(s)	8, 92, 331, 751, 1109, 1205, 1515
BseRI	GAGGAG	2 cut(s)	1038, 2177
BseSI	GKGCMC	1 cut(s)	1660
BseXI	GCAGC	3 cut(s)	732, 975, 1167
BseYI	CCCAGC	1 cut(s)	1469
Bsh1236I	CGCG	1 cut(s)	281
BshFI	GGCC	8 cut(s)	65, 330, 637, 897, 1958, 2143, 2195, 2329
BshNI	GGYRCC	3 cut(s)	128, 1655, 1889
BsiHKAI	GWGCWC	1 cut(s)	1928
BsiHKCI	CYCGRG	1 cut(s)	1776
BsiSI	CCGG	6 cut(s)	66, 126, 757, 898, 1278, 1431
BslI	CCNNNNNNNGG	5 cut(s)	14, 61, 282, 763, 2392
BsmAI	GTCTC	4 cut(s)	467, 733, 1113, 2480
BsmBI	CGTCTC	2 cut(s)	467, 733
BsmI	GAATGC	2 cut(s)	834, 1187
BsnI	GGCC	8 cut(s)	65, 330, 637, 897, 1958, 2143, 2195, 2329
BsoBI	CYCGRG	1 cut(s)	1776
Bsp1286I	GDGCHC	2 cut(s)	1660, 1928
Bsp1407I	TGTACA	1 cut(s)	1584
Bsp1720I	GCTNAGC	1 cut(s)	1310
BspACI	CCGC	6 cut(s)	279, 414, 618, 1030, 1527, 1887
BspANI	GGCC	8 cut(s)	65, 330, 637, 897, 1958, 2143, 2195, 2329
BspCNI	CTCAG	5 cut(s)	2077, 2179, 2361, 2476, 2491
BspFNI	CGCG	1 cut(s)	281
BspLI	GGNNCC	6 cut(s)	130, 1609, 1657, 1783, 1891, 1900
BspPI	GGATC	4 cut(s)	1747, 1776, 1789, 1839
BspQI	GCTCTTC	1 cut(s)	1916
BspT107I	GGYRCC	3 cut(s)	128, 1655, 1889
BsrBI	CCGCTC	1 cut(s)	1030
BsrDI	GCAATG	4 cut(s)	108, 1585, 2301, 2366
BsrFI	RCCGGY	2 cut(s)	65, 897
BsrGI	TGTACA	1 cut(s)	1584
BsrI	ACTGG	7 cut(s)	8, 92, 331, 751, 1109, 1205, 1515
BssAI	RCCGGY	2 cut(s)	65, 897
BssECI	CCNNGG	7 cut(s)	945, 1144, 1650, 1651, 1893, 1959, 2460
BssNAI	GTATAC	1 cut(s)	1114
BssNI	GRCGYC	1 cut(s)	2071
BssT1I	CCWWGG	3 cut(s)	1893, 1959, 2460
Bst1107I	GTATAC	1 cut(s)	1114
Bst2UI	CCWGG	5 cut(s)	946, 980, 1145, 1652, 1757
Bst4CI	ACNGT	9 cut(s)	218, 454, 814, 869, 1445, 1485, 1733, 1913, 2026
Bst6I	CTCTTC	2 cut(s)	429, 1916
BstACI	GRCGYC	1 cut(s)	2071
BstAUI	TGTACA	1 cut(s)	1584
BstBAI	YACGTR	1 cut(s)	1126
BstC8I	GCNNGC	5 cut(s)	412, 558, 639, 1185, 2145
BstDEI	CTNAG	6 cut(s)	1310, 2085, 2187, 2348, 2484, 2499
BstFNI	CGCG	1 cut(s)	281
BstH2I	RGCGCY	1 cut(s)	1998
BstHHI	GCGC	2 cut(s)	874, 1997
BstMAI	GTCTC	4 cut(s)	467, 733, 1113, 2480
BstMWI	GCNNNNNNNGC	5 cut(s)	126, 368, 557, 657, 2144
BstNI	CCWGG	5 cut(s)	946, 980, 1145, 1652, 1757
BstNSI	RCATGY	2 cut(s)	2005, 2478
BstSCI	CCNGG	5 cut(s)	944, 978, 1143, 1650, 1755
BstSLI	GKGCMC	1 cut(s)	1660
BstUI	CGCG	1 cut(s)	281
BstV1I	GCAGC	3 cut(s)	732, 975, 1167
BstV2I	GAAGAC	1 cut(s)	2198
BstX2I	RGATCY	1 cut(s)	1781
BstYI	RGATCY	1 cut(s)	1781
BstZ17I	GTATAC	1 cut(s)	1114
BsuI	GTATCC	2 cut(s)	1098, 1721
BsuRI	GGCC	8 cut(s)	65, 330, 637, 897, 1958, 2143, 2195, 2329
BtgZI	GCGATG	1 cut(s)	1688
BtrI	CACGTC	1 cut(s)	1918
BtsI	GCAGTG	2 cut(s)	681, 1304
BtsIMutI	CAGTG	6 cut(s)	450, 681, 744, 874, 1304, 1508
Cac8I	GCNNGC	5 cut(s)	412, 558, 639, 1185, 2145
CaiI	CAGNNNCTG	1 cut(s)	452
CfoI	GCGC	2 cut(s)	874, 1997
Cfr10I	RCCGGY	2 cut(s)	65, 897
Cfr13I	GGNCC	3 cut(s)	17, 635, 2193
CseI	GACGC	1 cut(s)	2079
CsiI	ACCWGGT	1 cut(s)	978
Csp6I	GTAC	8 cut(s)	219, 266, 349, 754, 1446, 1585, 1734, 2129
CspCI	CAANNNNNGTGG	5 cut(s)	697, 732, 1600, 1635, 2497
CviAII	CATG	9 cut(s)	359, 595, 956, 1661, 1771, 1883, 2002, 2309, 2475
CviQI	GTAC	8 cut(s)	219, 266, 349, 754, 1446, 1585, 1734, 2129
DdeI	CTNAG	6 cut(s)	1310, 2085, 2187, 2348, 2484, 2499
EaeI	YGGCCR	3 cut(s)	63, 328, 1956
Eam1104I	CTCTTC	2 cut(s)	429, 1916
EarI	CTCTTC	2 cut(s)	429, 1916
Eco130I	CCWWGG	3 cut(s)	1893, 1959, 2460
Eco32I	GATATC	2 cut(s)	172, 2398
Eco47I	GGWCC	1 cut(s)	17
Eco57I	CTGAAG	3 cut(s)	429, 1536, 1826
Eco88I	CYCGRG	1 cut(s)	1776
EcoRI	GAATTC	3 cut(s)	182, 299, 1330
EcoRII	CCWGG	5 cut(s)	944, 978, 1143, 1650, 1755
EcoRV	GATATC	2 cut(s)	172, 2398
EcoT14I	CCWWGG	3 cut(s)	1893, 1959, 2460
EcoT22I	ATGCAT	1 cut(s)	1598
ErhI	CCWWGG	3 cut(s)	1893, 1959, 2460
Esp3I	CGTCTC	2 cut(s)	467, 733
FaeI	CATG	9 cut(s)	362, 598, 959, 1664, 1774, 1886, 2005, 2312, 2478
FalI	AAGNNNNNCTT	2 cut(s)	2024, 2056
FatI	CATG	9 cut(s)	358, 594, 955, 1660, 1770, 1882, 2001, 2308, 2474
FauNDI	CATATG	1 cut(s)	1341
FbaI	TGATCA	3 cut(s)	1254, 1792, 2224
FblI	GTMKAC	2 cut(s)	1113, 2100
Fnu4HI	GCNGC	5 cut(s)	415, 721, 989, 1181, 1527
Fsp4HI	GCNGC	5 cut(s)	415, 721, 989, 1181, 1527
FspBI	CTAG	1 cut(s)	2051
GlaI	GCGC	2 cut(s)	873, 1996
GluI	GCNGC	5 cut(s)	415, 721, 989, 1181, 1527
GsaI	CCCAGC	1 cut(s)	1473
GsuI	CTGGAG	1 cut(s)	75
HaeII	RGCGCY	1 cut(s)	1998
HaeIII	GGCC	8 cut(s)	65, 330, 637, 897, 1958, 2143, 2195, 2329
HapII	CCGG	6 cut(s)	66, 126, 757, 898, 1278, 1431
HgaI	GACGC	1 cut(s)	2079
HhaI	GCGC	2 cut(s)	874, 1997
Hin1I	GRCGYC	1 cut(s)	2071
Hin1II	CATG	9 cut(s)	362, 598, 959, 1664, 1774, 1886, 2005, 2312, 2478
Hin6I	GCGC	2 cut(s)	872, 1995
HinP1I	GCGC	2 cut(s)	872, 1995
HincII	GTYRAC	1 cut(s)	321
HindII	GTYRAC	1 cut(s)	321
HindIII	AAGCTT	1 cut(s)	2242
HpaI	GTTAAC	1 cut(s)	321
HpaII	CCGG	6 cut(s)	66, 126, 757, 898, 1278, 1431
HphI	GGTGA	8 cut(s)	80, 782, 810, 934, 1312, 1473, 1757, 1901
Hpy166II	GTNNAC	5 cut(s)	321, 886, 1114, 1585, 2101
Hpy188III	TCNNGA	6 cut(s)	583, 740, 1015, 1669, 2051, 2441
Hpy8I	GTNNAC	5 cut(s)	321, 886, 1114, 1585, 2101
Hpy99I	CGWCG	3 cut(s)	53, 2073, 2335
HpyAV	CCTTC	8 cut(s)	44, 262, 650, 1143, 1291, 1889, 2026, 2386
HpyCH4III	ACNGT	9 cut(s)	218, 454, 814, 869, 1445, 1485, 1733, 1913, 2026
HpyCH4IV	ACGT	3 cut(s)	317, 1125, 1917
HpyF10VI	GCNNNNNNNGC	5 cut(s)	126, 368, 557, 657, 2144
HpyF3I	CTNAG	6 cut(s)	1310, 2085, 2187, 2348, 2484, 2499
HpySE526I	ACGT	3 cut(s)	317, 1125, 1917
Hsp92I	GRCGYC	1 cut(s)	2071
Hsp92II	CATG	9 cut(s)	362, 598, 959, 1664, 1774, 1886, 2005, 2312, 2478
HspAI	GCGC	2 cut(s)	872, 1995
Ksp22I	TGATCA	3 cut(s)	1254, 1792, 2224
KspAI	GTTAAC	1 cut(s)	321
LguI	GCTCTTC	1 cut(s)	1916
LmnI	GCTCC	4 cut(s)	389, 930, 1607, 1992
Lsp1109I	GCAGC	3 cut(s)	732, 975, 1167
LweI	GCATC	2 cut(s)	448, 1583
MabI	ACCWGGT	1 cut(s)	978
MaeI	CTAG	1 cut(s)	2051
MaeII	ACGT	3 cut(s)	317, 1125, 1917
MaeIII	GTNAC	4 cut(s)	212, 1300, 1499, 1913
MbiI	CCGCTC	1 cut(s)	1030
MfeI	CAATTG	2 cut(s)	669, 903
MflI	RGATCY	1 cut(s)	1781
MhlI	GDGCHC	2 cut(s)	1660, 1928
MlsI	TGGCCA	2 cut(s)	330, 1958
MluNI	TGGCCA	2 cut(s)	330, 1958
MlyI	GAGTC	3 cut(s)	529, 1652, 2005
MmeI	TCCRAC	2 cut(s)	1063, 1546
Mox20I	TGGCCA	2 cut(s)	330, 1958
Mph1103I	ATGCAT	1 cut(s)	1598
MscI	TGGCCA	2 cut(s)	330, 1958
MseI	TTAA	6 cut(s)	320, 1457, 1626, 2081, 2246, 2273
MslI	CAYNNNNRTG	6 cut(s)	686, 749, 996, 1887, 2027, 2313
Msp20I	TGGCCA	2 cut(s)	330, 1958
MspA1I	CMGCKG	1 cut(s)	2147
MspI	CCGG	6 cut(s)	66, 126, 757, 898, 1278, 1431
MspR9I	CCNGG	5 cut(s)	946, 980, 1145, 1652, 1757
MunI	CAATTG	2 cut(s)	669, 903
Mva1269I	GAATGC	2 cut(s)	834, 1187
MvaI	CCWGG	5 cut(s)	946, 980, 1145, 1652, 1757
MvnI	CGCG	1 cut(s)	281
MwoI	GCNNNNNNNGC	5 cut(s)	126, 368, 557, 657, 2144
NdeI	CATATG	1 cut(s)	1341
NlaIII	CATG	9 cut(s)	362, 598, 959, 1664, 1774, 1886, 2005, 2312, 2478
NlaIV	GGNNCC	6 cut(s)	130, 1609, 1657, 1783, 1891, 1900
NmeAIII	GCCGAG	1 cut(s)	577
NmuCI	GTSAC	2 cut(s)	1300, 1913
NsiI	ATGCAT	1 cut(s)	1598
NspI	RCATGY	2 cut(s)	2005, 2478
OliI	CACNNNNGTG	1 cut(s)	2027
PaeR7I	CTCGAG	1 cut(s)	1776
PasI	CCCWGGG	1 cut(s)	1651
PciI	ACATGT	2 cut(s)	2001, 2474
PciSI	GCTCTTC	1 cut(s)	1916
PctI	GAATGC	2 cut(s)	834, 1187
PflFI	GACNNNGTC	1 cut(s)	1079
PflMI	CCANNNNNTGG	2 cut(s)	14, 61
PkrI	GCNGC	5 cut(s)	416, 722, 990, 1182, 1528
PleI	GAGTC	3 cut(s)	528, 1651, 2005
PpsI	GAGTC	3 cut(s)	528, 1651, 2005
Ppu21I	YACGTR	1 cut(s)	1126
PscI	ACATGT	2 cut(s)	2001, 2474
Psp6I	CCWGG	5 cut(s)	944, 978, 1143, 1650, 1755
PspFI	CCCAGC	1 cut(s)	1469
PspGI	CCWGG	5 cut(s)	944, 978, 1143, 1650, 1755
PspN4I	GGNNCC	6 cut(s)	130, 1609, 1657, 1783, 1891, 1900
PspPI	GGNCC	3 cut(s)	17, 635, 2193
PspXI	VCTCGAGB	1 cut(s)	1776
PstNI	CAGNNNCTG	1 cut(s)	452
PsuI	RGATCY	1 cut(s)	1781
PsyI	GACNNNGTC	1 cut(s)	1079
PvuII	CAGCTG	1 cut(s)	2147
RsaI	GTAC	8 cut(s)	220, 267, 350, 755, 1447, 1586, 1735, 2130
RsaNI	GTAC	8 cut(s)	219, 266, 349, 754, 1446, 1585, 1734, 2129
RseI	CAYNNNNRTG	6 cut(s)	686, 749, 996, 1887, 2027, 2313
SapI	GCTCTTC	1 cut(s)	1916
SaqAI	TTAA	6 cut(s)	320, 1457, 1626, 2081, 2246, 2273
SatI	GCNGC	5 cut(s)	415, 721, 989, 1181, 1527
Sau96I	GGNCC	3 cut(s)	17, 635, 2193
SchI	GAGTC	3 cut(s)	529, 1652, 2005
ScrFI	CCNGG	5 cut(s)	946, 980, 1145, 1652, 1757
SduI	GDGCHC	2 cut(s)	1660, 1928
SexAI	ACCWGGT	1 cut(s)	978
SfaNI	GCATC	2 cut(s)	448, 1583
Sfr274I	CTCGAG	1 cut(s)	1776
SinI	GGWCC	1 cut(s)	17
SlaI	CTCGAG	1 cut(s)	1776
SmiMI	CAYNNNNRTG	6 cut(s)	686, 749, 996, 1887, 2027, 2313
SmlI	CTYRAG	4 cut(s)	842, 1776, 1863, 2357
SmoI	CTYRAG	4 cut(s)	842, 1776, 1863, 2357
SsiI	CCGC	6 cut(s)	279, 414, 618, 1030, 1527, 1887
SspMI	CTAG	1 cut(s)	2051
StyD4I	CCNGG	5 cut(s)	944, 978, 1143, 1650, 1755
StyI	CCWWGG	3 cut(s)	1893, 1959, 2460
TaaI	ACNGT	9 cut(s)	218, 454, 814, 869, 1445, 1485, 1733, 1913, 2026
TaiI	ACGT	3 cut(s)	320, 1128, 1920
TaqI	TCGA	6 cut(s)	582, 1005, 1777, 2235, 2333, 2440
TatI	WGTACW	5 cut(s)	218, 348, 1445, 1584, 1733
TauI	GCSGC	2 cut(s)	417, 1529
Tru1I	TTAA	6 cut(s)	320, 1457, 1626, 2081, 2246, 2273
Tru9I	TTAA	6 cut(s)	320, 1457, 1626, 2081, 2246, 2273
TscAI	CASTG	6 cut(s)	457, 688, 751, 874, 1311, 1515
TseFI	GTSAC	2 cut(s)	1300, 1913
TseI	GCWGC	3 cut(s)	720, 988, 1180
Tsp45I	GTSAC	2 cut(s)	1300, 1913
TspGWI	ACGGA	4 cut(s)	391, 591, 1778, 2279
TspRI	CASTG	6 cut(s)	457, 688, 751, 874, 1311, 1515
Tth111I	GACNNNGTC	1 cut(s)	1079
Van91I	CCANNNNNTGG	2 cut(s)	14, 61
VpaK11BI	GGWCC	1 cut(s)	17
XapI	RAATTY	6 cut(s)	182, 299, 950, 1008, 1242, 1330
XbaI	TCTAGA	1 cut(s)	2050
XceI	RCATGY	2 cut(s)	2005, 2478
XhoI	CTCGAG	1 cut(s)	1776
XmiI	GTMKAC	2 cut(s)	1113, 2100
XspI	CTAG	1 cut(s)	2051
Zsp2I	ATGCAT	1 cut(s)	1598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.