Rmu_sc0038644.1_g000001

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0038644.1
Physical Location & Seq
Forward (+)
1 .. 1129
1129 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0038644.1_g000001.1.cds

Sequence Viewer

Length: 758 bp
agatcaaggccgccaccaaaaacttcaatgatgcttttatcattggagctggaggatttggtaatgtatacaaaggatgcattgatggtggagccactccagttgcaatcaaatggctgaaaccagaatcatcccaaggtgtccatgagttcgagactgaaattgagatgctctcccaacttcgtcatcgccatttggtttcactcattggatattgtactgataaaggagagatgatcttagtgtatgattacatggcacaaggaaccctccgtgaccatctctaccacactaataacccacctcttccctgggaacaacggcttcagatttgtattggtgcagctcgagggttgcagtatcttcttagtggtgcaaagggcaccatcattcaccgagatgtgaagagcacaaacatcttattggatgacaaatgggtggccaaggtttcagatttcgggctgtccaaaggcacaacaaacatgtccaaaacccacatcagcacgattgtgaaagggagttgcgggtatctggatccagaatactaccgacgacaacgtctgactgagaagtcagacgtctactcatttggtgtagttctgtgtgaggtattgtgtgcaaggtcagcagtaatacatacagagaaaacagaattacaccaagtgaatctagcagagtggaccaagagctgtcatcagaatagagaacttgatcaaaacattgatgcaagtttgagaggtaagattgcagccgagtga

Protein Analysis

251

Amino Acids

28.04

Weight (kDa)

7.76

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 557, 570
AatII GACGTC 1 cut(s) 581
AccB1I GGYRCC 1 cut(s) 382
AccI GTMKAC 2 cut(s) 68, 581
AciI CCGC 2 cut(s) 11, 524
AclWI GGATC 2 cut(s) 529, 542
AcoI YGGCCR 1 cut(s) 440
AcuI CTGAAG 1 cut(s) 310
AcyI GRCGYC 1 cut(s) 578
AdeI CACNNNGTG 1 cut(s) 663
AfaI GTAC 1 cut(s) 219
AflIII ACRYGT 1 cut(s) 482
AgsI TTSAA 1 cut(s) 27
AjnI CCWGG 1 cut(s) 310
AleI CACNNNNGTG 1 cut(s) 508
AluBI AGCT 3 cut(s) 49, 346, 689
AluI AGCT 3 cut(s) 49, 346, 689
Alw21I GWGCWC 1 cut(s) 412
Alw26I GTCTC 1 cut(s) 148
AlwI GGATC 2 cut(s) 529, 542
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 2 cut(s) 8, 440
ApeKI GCWGC 2 cut(s) 343, 748
AspS9I GGNCC 1 cut(s) 680
AsuHPI GGTGA 1 cut(s) 385
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 1 cut(s) 680
BaeGI GKGCMC 1 cut(s) 385
BalI TGGCCA 1 cut(s) 442
BamHI GGATCC 1 cut(s) 534
BanI GGYRCC 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 412
BbvI GCAGC 1 cut(s) 355
BccI CCATC 3 cut(s) 79, 287, 394
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 1 cut(s) 312
BclI TGATCA 1 cut(s) 711
BcoDI GTCTC 1 cut(s) 148
BfaI CTAG 1 cut(s) 670
BisI GCNGC 3 cut(s) 11, 344, 749
BlsI GCNGC 3 cut(s) 12, 345, 750
Bme1390I CCNGG 1 cut(s) 312
Bme18I GGWCC 1 cut(s) 680
BmeT110I CYCGRG 1 cut(s) 347
BmgT120I GGNCC 1 cut(s) 680
BmiI GGNNCC 4 cut(s) 93, 267, 384, 536
BmrFI CCNGG 1 cut(s) 312
BmsI GCATC 4 cut(s) 21, 67, 158, 714
BplI GAGNNNNNCTC 2 cut(s) 157, 189
BpmI CTGGAG 2 cut(s) 71, 83
BsaHI GRCGYC 1 cut(s) 578
BsaJI CCNNGG 4 cut(s) 135, 310, 311, 443
Bse1I ACTGG 1 cut(s) 100
BseBI CCWGG 1 cut(s) 312
BseDI CCNNGG 4 cut(s) 135, 310, 311, 443
BseGI GGATG 3 cut(s) 82, 130, 432
BseMII CTCAG 1 cut(s) 557
BseNI ACTGG 1 cut(s) 100
BseSI GKGCMC 1 cut(s) 385
BseXI GCAGC 1 cut(s) 355
BsgI GTGCAG 1 cut(s) 362
BshFI GGCC 2 cut(s) 10, 442
BshNI GGYRCC 1 cut(s) 382
BsiHKAI GWGCWC 1 cut(s) 412
BsiHKCI CYCGRG 1 cut(s) 347
BsmAI GTCTC 1 cut(s) 148
BsnI GGCC 2 cut(s) 10, 442
BsoBI CYCGRG 1 cut(s) 347
Bsp1286I GDGCHC 2 cut(s) 385, 412
Bsp143I GATC 4 cut(s) 2, 236, 534, 711
BspACI CCGC 2 cut(s) 11, 524
BspANI GGCC 2 cut(s) 10, 442
BspCNI CTCAG 1 cut(s) 558
BspLI GGNNCC 4 cut(s) 93, 267, 384, 536
BspPI GGATC 2 cut(s) 529, 542
BspQI GCTCTTC 1 cut(s) 400
BspT107I GGYRCC 1 cut(s) 382
BsrI ACTGG 1 cut(s) 100
BssECI CCNNGG 4 cut(s) 135, 310, 311, 443
BssMI GATC 4 cut(s) 2, 236, 534, 711
BssNAI GTATAC 1 cut(s) 69
BssNI GRCGYC 1 cut(s) 578
BssT1I CCWWGG 2 cut(s) 135, 443
Bst1107I GTATAC 1 cut(s) 69
Bst2UI CCWGG 1 cut(s) 312
Bst6I CTCTTC 2 cut(s) 311, 400
BstACI GRCGYC 1 cut(s) 578
BstDEI CTNAG 3 cut(s) 240, 367, 566
BstF5I GGATG 3 cut(s) 82, 130, 432
BstKTI GATC 4 cut(s) 5, 239, 537, 714
BstMAI GTCTC 1 cut(s) 148
BstMBI GATC 4 cut(s) 2, 236, 534, 711
BstMWI GCNNNNNNNGC 1 cut(s) 625
BstNI CCWGG 1 cut(s) 312
BstNSI RCATGY 1 cut(s) 486
BstSCI CCNGG 1 cut(s) 310
BstSLI GKGCMC 1 cut(s) 385
BstV1I GCAGC 1 cut(s) 355
BstX2I RGATCY 1 cut(s) 534
BstYI RGATCY 1 cut(s) 534
BstZ17I GTATAC 1 cut(s) 69
BsuRI GGCC 2 cut(s) 10, 442
BtgZI GCGATG 1 cut(s) 172
BtsCI GGATG 3 cut(s) 82, 130, 432
Cfr13I GGNCC 1 cut(s) 680
Csp6I GTAC 1 cut(s) 218
CspCI CAANNNNNGTGG 2 cut(s) 84, 119
CviAII CATG 3 cut(s) 145, 255, 483
CviQI GTAC 1 cut(s) 218
DdeI CTNAG 3 cut(s) 240, 367, 566
DpnI GATC 4 cut(s) 4, 238, 536, 713
DpnII GATC 4 cut(s) 2, 236, 534, 711
DraIII CACNNNGTG 1 cut(s) 663
DrdI GACNNNNNNGTC 2 cut(s) 557, 570
DseDI GACNNNNNNGTC 2 cut(s) 557, 570
EaeI YGGCCR 1 cut(s) 440
Eam1104I CTCTTC 2 cut(s) 311, 400
EarI CTCTTC 2 cut(s) 311, 400
Eco130I CCWWGG 2 cut(s) 135, 443
Eco47I GGWCC 1 cut(s) 680
Eco57I CTGAAG 1 cut(s) 310
Eco88I CYCGRG 1 cut(s) 347
EcoRII CCWGG 1 cut(s) 310
EcoT14I CCWWGG 2 cut(s) 135, 443
EcoT22I ATGCAT 1 cut(s) 82
ErhI CCWWGG 2 cut(s) 135, 443
FaeI CATG 3 cut(s) 148, 258, 486
FaiI YATR 6 cut(s) 69, 146, 248, 256, 484, 638
FatI CATG 3 cut(s) 144, 254, 482
FauI CCCGC 1 cut(s) 517
FbaI TGATCA 1 cut(s) 711
FblI GTMKAC 2 cut(s) 68, 581
Fnu4HI GCNGC 3 cut(s) 11, 344, 749
FokI GGATG 3 cut(s) 89, 117, 439
Fsp4HI GCNGC 3 cut(s) 11, 344, 749
FspBI CTAG 1 cut(s) 670
GluI GCNGC 3 cut(s) 11, 344, 749
GsuI CTGGAG 2 cut(s) 71, 83
HaeIII GGCC 2 cut(s) 10, 442
Hin1I GRCGYC 1 cut(s) 578
Hin1II CATG 3 cut(s) 148, 258, 486
HinfI GANTC 2 cut(s) 127, 666
HphI GGTGA 1 cut(s) 385
Hpy166II GTNNAC 3 cut(s) 69, 582, 680
Hpy188I TCNGA 5 cut(s) 329, 453, 563, 576, 698
Hpy188III TCNNGA 3 cut(s) 153, 532, 538
Hpy8I GTNNAC 3 cut(s) 69, 582, 680
Hpy99I CGWCG 1 cut(s) 554
HpyCH4IV ACGT 2 cut(s) 558, 578
HpyCH4V TGCA 8 cut(s) 80, 106, 343, 357, 376, 619, 727, 748
HpyF10VI GCNNNNNNNGC 1 cut(s) 625
HpyF3I CTNAG 3 cut(s) 240, 367, 566
HpySE526I ACGT 2 cut(s) 558, 578
Hsp92I GRCGYC 1 cut(s) 578
Hsp92II CATG 3 cut(s) 148, 258, 486
Ksp22I TGATCA 1 cut(s) 711
Kzo9I GATC 4 cut(s) 2, 236, 534, 711
LguI GCTCTTC 1 cut(s) 400
LmnI GCTCC 2 cut(s) 46, 91
LpnPI CCDG 7 cut(s) 35, 113, 137, 297, 324, 517, 551
Lsp1109I GCAGC 1 cut(s) 355
LweI GCATC 4 cut(s) 21, 67, 158, 714
MaeI CTAG 1 cut(s) 670
MaeII ACGT 2 cut(s) 558, 578
MaeIII GTNAC 1 cut(s) 274
MalI GATC 4 cut(s) 4, 238, 536, 713
MboI GATC 4 cut(s) 2, 236, 534, 711
MboII GAAGA 3 cut(s) 298, 355, 417
MflI RGATCY 1 cut(s) 534
MhlI GDGCHC 2 cut(s) 385, 412
MlsI TGGCCA 1 cut(s) 442
MluCI AATT 2 cut(s) 161, 652
MluNI TGGCCA 1 cut(s) 442
MnlI CCTC 6 cut(s) 46, 280, 314, 343, 600, 730
Mox20I TGGCCA 1 cut(s) 442
Mph1103I ATGCAT 1 cut(s) 82
MscI TGGCCA 1 cut(s) 442
MslI CAYNNNNRTG 2 cut(s) 398, 508
Msp20I TGGCCA 1 cut(s) 442
MspR9I CCNGG 1 cut(s) 312
MvaI CCWGG 1 cut(s) 312
MwoI GCNNNNNNNGC 1 cut(s) 625
NdeII GATC 4 cut(s) 2, 236, 534, 711
NlaIII CATG 3 cut(s) 148, 258, 486
NlaIV GGNNCC 4 cut(s) 93, 267, 384, 536
NmuCI GTSAC 1 cut(s) 274
NsiI ATGCAT 1 cut(s) 82
NspI RCATGY 1 cut(s) 486
OliI CACNNNNGTG 1 cut(s) 508
PaeR7I CTCGAG 1 cut(s) 347
PasI CCCWGGG 1 cut(s) 311
PciI ACATGT 1 cut(s) 482
PciSI GCTCTTC 1 cut(s) 400
PfeI GAWTC 2 cut(s) 127, 666
PflFI GACNNNGTC 1 cut(s) 557
PkrI GCNGC 3 cut(s) 12, 345, 750
PscI ACATGT 1 cut(s) 482
Psp6I CCWGG 1 cut(s) 310
PspGI CCWGG 1 cut(s) 310
PspN4I GGNNCC 4 cut(s) 93, 267, 384, 536
PspPI GGNCC 1 cut(s) 680
PspXI VCTCGAGB 1 cut(s) 347
PsuI RGATCY 1 cut(s) 534
PsyI GACNNNGTC 1 cut(s) 557
RsaI GTAC 1 cut(s) 219
RsaNI GTAC 1 cut(s) 218
RseI CAYNNNNRTG 2 cut(s) 398, 508
SapI GCTCTTC 1 cut(s) 400
SatI GCNGC 3 cut(s) 11, 344, 749
Sau3AI GATC 4 cut(s) 2, 236, 534, 711
Sau96I GGNCC 1 cut(s) 680
ScrFI CCNGG 1 cut(s) 312
SduI GDGCHC 2 cut(s) 385, 412
SfaNI GCATC 4 cut(s) 21, 67, 158, 714
Sfr274I CTCGAG 1 cut(s) 347
SinI GGWCC 1 cut(s) 680
SlaI CTCGAG 1 cut(s) 347
SmiMI CAYNNNNRTG 2 cut(s) 398, 508
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
Sse9I AATT 2 cut(s) 161, 652
SsiI CCGC 2 cut(s) 11, 524
SspMI CTAG 1 cut(s) 670
StyD4I CCNGG 1 cut(s) 310
StyI CCWWGG 2 cut(s) 135, 443
TaiI ACGT 2 cut(s) 561, 581
TaqI TCGA 2 cut(s) 152, 348
TasI AATT 2 cut(s) 161, 652
TatI WGTACW 1 cut(s) 217
TauI GCSGC 1 cut(s) 13
TfiI GAWTC 2 cut(s) 127, 666
TseFI GTSAC 1 cut(s) 274
TseI GCWGC 2 cut(s) 343, 748
Tsp45I GTSAC 1 cut(s) 274
TspGWI ACGGA 1 cut(s) 262
Tth111I GACNNNGTC 1 cut(s) 557
VpaK11BI GGWCC 1 cut(s) 680
XceI RCATGY 1 cut(s) 486
XcmI CCANNNNNNNNNTGG 1 cut(s) 308
XhoI CTCGAG 1 cut(s) 347
XmiI GTMKAC 2 cut(s) 68, 581
XspI CTAG 1 cut(s) 670
ZraI GACGTC 1 cut(s) 579
Zsp2I ATGCAT 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.