Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004097.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

367 .. 2887

Gene Structure 2521 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004097.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

atgaaaccaattctcgttcctctttaccctttcagcttgttttccctcttcgtcgcccaactggtgaccggagagtccacaaccatctactctccaaccaatgttatcaaccttagctgtggctcatcagacgacatggacactgactatgattctcgaacttggattggagatatcaactcgaatctttcccctatagaagttcgtagtacatcccaagctttgcaaaccccaagcttgtccatggggctgccgtacgacacagcacggctttctcactcagaattcacttaccggtttcccgtcaatcctggccaaaagttcatccgcttgtatttctactcagattcatacaacggcgacttcaaccgctccaagtctctcttctctgtcaaagccggtggctacacccttctcaaagacttcaacacttctgtcactgcagatgctgagacgacgtggctgatgtgcaaagaattctgtattaacattgaggcagaacaacagatgctgaacatcacattcactcccagcaaagatggatacgcgtttatcaacgggattgaaattatgtccatgcctgcctctctttactacactgcagcccaaggcgatgggccaagtctcatcggcaccaaaaaccggtatcctgtgaaaaacaacaccgctgtggagaatatctaccgaatcaacgtcggtagagacggtggaatctcgaatgaagacaccggcatgtaccgctcctgggatccatgtgacggatgctacttattgggtggtttcacgtcgacaccacccacatttgaacttcaactcaaatttgcaagaatccctaactacactgccccagaagaggtttaccgaaccggccggtcaacggggctgtacaaaaccatcaacaacagctacaatctcacctgggggtttcctatagatccacaattttattacctgaaagcggacataatccaatggagtggaggaaatgggattcccgtatatagagattaccttctgttcgtgcccaatcgtccaaacaagaagaaaggtaaagttgatatcattgttgcacaacaaccaaattcggaatctcgatttaaggatgcaatcttgaatgggctcgaaatcttcaaactgaatgacacaaacggcaatctcgccggacccaatcccgacccaccacctccaccaccgccgttctcaatcccgacacaaacggaacaaccaaatgtgaaaccgcttcctatgcttccaacccttgccggcgtggaacaaaactcaaggactccagctccagccgctgggtcatttttaccatcttatttgtgtcgttacttttcgctgacagagatcaaagccgccaccaaatgcttcgatgatactttcattattggagctgggggatttggcaacgtatacaaaggattcatcgatggtggaggcactccagttgcaatcaaacggctgaaagccatgtcatcacaagggtcccgcgagtttaggacggaaattgaaatgctctctcgactccgccactgccatttggtgtctcttatcggattttgtgccgatgaaggtttgcactatcttcacacaggtactaagggcaccatcattcaccgtgacgtaaagagcacaaacatattattggatgagaaatgggtatccaaggtttcaaattttgggttgtcaagaaagggcacaatcactgtgtccaagacccacattagcacaaaggtgaagggtagttttggatatcttgacccggattactatcgacgtcaacaattaactgagaagtctgatgtgtactccttcggtgtagtgttgtgcgaggtattgtgtggaaggccagctataacaattgtagataataatggagttggcttagctggatgggccaagaagtgtcatcgtaatgggaaacttgatcaaattattgaccaaaatttaaacggtaagattgcagcacgatgcttgcacaaatatgttaacatggcgatgaattgcatagatgataatggagtcaatccaccttcgatggatgatgttttgagagggcttcaatttgcattgcagttgcaacagaacaaagaggattatattgattacgttgaaaggacgcatgaagataagattgtttcgatcagggacaatgaagggtccagtgaacaagattgtggggcgaacgaatccgtgcaagggttgactgggacgatcttctctgagatcatcgaaccggttggtagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

750

Amino Acids

83.28

Weight (kDa)

6.26

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	73
AatII	GACGTC	1 cut(s)	1783
AccB1I	GGYRCC	2 cut(s)	632, 1607
AccB7I	CCANNNNNTGG	1 cut(s)	1301
AccBSI	CCGCTC	2 cut(s)	372, 741
AccI	GTMKAC	2 cut(s)	788, 1416
AccII	CGCG	2 cut(s)	548, 1494
AclWI	GGATC	3 cut(s)	743, 756, 929
AcoI	YGGCCR	2 cut(s)	313, 868
AcsI	RAATTY	6 cut(s)	284, 476, 818, 1081, 1678, 1948
AcyI	GRCGYC	1 cut(s)	1780
AfaI	GTAC	6 cut(s)	211, 257, 737, 887, 1600, 1811
AfiI	CCNNNNNNNGG	8 cut(s)	642, 745, 758, 853, 877, 958, 1301, 2202
AflIII	ACRYGT	1 cut(s)	546
AgeI	ACCGGT	3 cut(s)	294, 642, 2239
AjiI	CACGTC	2 cut(s)	459, 786
AjnI	CCWGG	3 cut(s)	310, 743, 917
AjuI	GAANNNNNNNTTGG	2 cut(s)	368, 400
AleI	CACNNNNGTG	2 cut(s)	668, 1736
AluBI	AGCT	9 cut(s)	36, 117, 221, 237, 906, 1292, 1397, 1856, 1892
AluI	AGCT	9 cut(s)	36, 117, 221, 237, 906, 1292, 1397, 1856, 1892
Alw21I	GWGCWC	1 cut(s)	1637
Alw26I	GTCTC	5 cut(s)	384, 446, 629, 696, 1554
AlwI	GGATC	3 cut(s)	743, 756, 929
AlwNI	CAGNNNCTG	3 cut(s)	449, 511, 1301
AoxI	GGCC	5 cut(s)	313, 617, 868, 1850, 1899
ApeKI	GCWGC	3 cut(s)	250, 602, 1967
ApoI	RAATTY	6 cut(s)	284, 476, 818, 1081, 1678, 1948
AsiGI	ACCGGT	3 cut(s)	294, 642, 2239
AspS9I	GGNCC	5 cut(s)	617, 1163, 1488, 1899, 2163
AsuC2I	CCSGG	1 cut(s)	1766
AsuHPI	GGTGA	4 cut(s)	76, 907, 1610, 1750
AvaII	GGWCC	3 cut(s)	1163, 1488, 2163
BaeGI	GKGCMC	3 cut(s)	1026, 1610, 1703
BalI	TGGCCA	1 cut(s)	315
BamHI	GGATCC	1 cut(s)	748
BanI	GGYRCC	2 cut(s)	632, 1607
BanII	GRGCYC	1 cut(s)	1122
BbsI	GAAGAC	1 cut(s)	729
Bbv12I	GWGCWC	1 cut(s)	1637
BbvI	GCAGC	3 cut(s)	237, 614, 1979
BccI	CCATC	9 cut(s)	92, 533, 608, 902, 1324, 1427, 1619, 1890, 2035
BceAI	ACGGC	6 cut(s)	238, 284, 373, 1165, 1180, 1478
BciT130I	CCWGG	3 cut(s)	312, 745, 919
BciVI	GTATCC	3 cut(s)	536, 657, 1675
BclI	TGATCA	1 cut(s)	1930
BcnI	CCSGG	1 cut(s)	1766
BcoDI	GTCTC	5 cut(s)	384, 446, 629, 696, 1554
BfmI	CTRYAG	4 cut(s)	195, 441, 600, 930
BfuI	GTATCC	3 cut(s)	536, 657, 1675
BisI	GCNGC	5 cut(s)	251, 603, 1299, 1359, 1968
BlpI	GCTNAGC	1 cut(s)	1888
BlsI	GCNGC	5 cut(s)	252, 604, 1300, 1360, 1969
Bme1390I	CCNGG	4 cut(s)	312, 745, 919, 1766
Bme18I	GGWCC	3 cut(s)	1163, 1488, 2163
BmgBI	CACGTC	2 cut(s)	459, 786
BmgT120I	GGNCC	5 cut(s)	617, 1163, 1488, 1899, 2163
BmiI	GGNNCC	7 cut(s)	634, 750, 1165, 1489, 1490, 1609, 2164
BmrFI	CCNGG	4 cut(s)	312, 745, 919, 1766
BmrI	ACTGGG	1 cut(s)	2220
BmsI	GCATC	5 cut(s)	436, 498, 752, 1093, 1964
BmuI	ACTGGG	1 cut(s)	2220
BpiI	GAAGAC	1 cut(s)	729
BpmI	CTGGAG	3 cut(s)	1272, 1278, 1431
Bpu10I	CCTNAGC	1 cut(s)	113
Bpu1102I	GCTNAGC	1 cut(s)	1888
BpuEI	CTTGAG	1 cut(s)	1264
BpuMI	CCSGG	1 cut(s)	1766
Bsa29I	ATCGAT	1 cut(s)	1431
BsaBI	GATNNNNATC	1 cut(s)	1773
BsaHI	GRCGYC	1 cut(s)	1780
BsaJI	CCNNGG	5 cut(s)	243, 607, 744, 918, 1668
BsaWI	WCCGGW	4 cut(s)	68, 294, 642, 2239
BsaXI	ACNNNNNCTCC	4 cut(s)	511, 541, 1276, 1306
Bsc4I	CCNNNNNNNGG	8 cut(s)	642, 745, 758, 853, 877, 958, 1301, 2202
Bse118I	RCCGGY	8 cut(s)	294, 398, 642, 728, 866, 870, 1262, 2239
Bse1I	ACTGG	4 cut(s)	66, 1448, 2166, 2215
Bse3DI	GCAATG	1 cut(s)	2072
Bse8I	GATNNNNATC	1 cut(s)	1773
BseBI	CCWGG	3 cut(s)	312, 745, 919
BseCI	ATCGAT	1 cut(s)	1431
BseDI	CCNNGG	5 cut(s)	243, 607, 744, 918, 1668
BseGI	GGATG	7 cut(s)	212, 324, 767, 1108, 1657, 1901, 2050
BseJI	GATNNNNATC	1 cut(s)	1773
BseLI	CCNNNNNNNGG	8 cut(s)	642, 745, 758, 853, 877, 958, 1301, 2202
BseMI	GCAATG	1 cut(s)	2072
BseMII	CTCAG	5 cut(s)	294, 357, 441, 1785, 2217
BseNI	ACTGG	4 cut(s)	66, 1448, 2166, 2215
BseSI	GKGCMC	3 cut(s)	1026, 1610, 1703
BseX3I	CGGCCG	1 cut(s)	868
BseXI	GCAGC	3 cut(s)	237, 614, 1979
BseYI	CCCAGC	3 cut(s)	530, 1301, 1397
Bsh1236I	CGCG	2 cut(s)	548, 1494
Bsh1285I	CGRYCG	1 cut(s)	871
BshFI	GGCC	5 cut(s)	315, 619, 870, 1852, 1901
BshNI	GGYRCC	2 cut(s)	632, 1607
BshTI	ACCGGT	3 cut(s)	294, 642, 2239
BshVI	ATCGAT	1 cut(s)	1431
BsiEI	CGRYCG	1 cut(s)	871
BsiHKAI	GWGCWC	1 cut(s)	1637
BsiWI	CGTACG	1 cut(s)	255
BslFI	GGGAC	3 cut(s)	1474, 2165, 2227
BslI	CCNNNNNNNGG	8 cut(s)	642, 745, 758, 853, 877, 958, 1301, 2202
BsmAI	GTCTC	5 cut(s)	384, 446, 629, 696, 1554
BsmBI	CGTCTC	2 cut(s)	446, 696
BsmFI	GGGAC	3 cut(s)	1474, 2165, 2227
BsnI	GGCC	5 cut(s)	315, 619, 870, 1852, 1901
Bsp1286I	GDGCHC	5 cut(s)	1026, 1122, 1610, 1637, 1703
Bsp1407I	TGTACA	1 cut(s)	885
Bsp143I	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
Bsp1720I	GCTNAGC	1 cut(s)	1888
Bsp19I	CCATGG	1 cut(s)	243
BspANI	GGCC	5 cut(s)	315, 619, 870, 1852, 1901
BspCNI	CTCAG	5 cut(s)	293, 356, 442, 1786, 2218
BspDI	ATCGAT	1 cut(s)	1431
BspFNI	CGCG	2 cut(s)	548, 1494
BspLI	GGNNCC	7 cut(s)	634, 750, 1165, 1489, 1490, 1609, 2164
BspMAI	CTGCAG	2 cut(s)	445, 604
BspPI	GGATC	3 cut(s)	743, 756, 929
BspT107I	GGYRCC	2 cut(s)	632, 1607
BsrBI	CCGCTC	2 cut(s)	372, 741
BsrDI	GCAATG	1 cut(s)	2072
BsrFI	RCCGGY	8 cut(s)	294, 398, 642, 728, 866, 870, 1262, 2239
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	4 cut(s)	66, 1448, 2166, 2215
BssAI	RCCGGY	8 cut(s)	294, 398, 642, 728, 866, 870, 1262, 2239
BssECI	CCNNGG	5 cut(s)	243, 607, 744, 918, 1668
BssMI	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
BssNAI	GTATAC	1 cut(s)	1417
BssNI	GRCGYC	1 cut(s)	1780
BssT1I	CCWWGG	3 cut(s)	243, 607, 1668
Bst1107I	GTATAC	1 cut(s)	1417
Bst2UI	CCWGG	3 cut(s)	312, 745, 919
Bst4CI	ACNGT	4 cut(s)	707, 1622, 1711, 1958
Bst6I	CTCTTC	3 cut(s)	53, 389, 846
BstACI	GRCGYC	1 cut(s)	1780
BstAUI	TGTACA	1 cut(s)	885
BstC8I	GCNNGC	4 cut(s)	582, 1264, 1854, 1979
BstDEI	CTNAG	8 cut(s)	113, 280, 343, 450, 1602, 1794, 1888, 2226
BstDSI	CCRYGG	1 cut(s)	243
BstEII	GGTNACC	1 cut(s)	64
BstF5I	GGATG	7 cut(s)	212, 324, 767, 1108, 1657, 1901, 2050
BstFNI	CGCG	2 cut(s)	548, 1494
BstKTI	GATC	7 cut(s)	751, 937, 1353, 1933, 2148, 2220, 2232
BstMAI	GTCTC	5 cut(s)	384, 446, 629, 696, 1554
BstMBI	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
BstMCI	CGRYCG	1 cut(s)	871
BstMWI	GCNNNNNNNGC	4 cut(s)	738, 1246, 1298, 1898
BstNI	CCWGG	3 cut(s)	312, 745, 919
BstNSI	RCATGY	1 cut(s)	736
BstPI	GGTNACC	1 cut(s)	64
BstSCI	CCNGG	4 cut(s)	310, 743, 917, 1764
BstSFI	CTRYAG	4 cut(s)	195, 441, 600, 930
BstSLI	GKGCMC	3 cut(s)	1026, 1610, 1703
BstUI	CGCG	2 cut(s)	548, 1494
BstV1I	GCAGC	3 cut(s)	237, 614, 1979
BstV2I	GAAGAC	1 cut(s)	729
BstX2I	RGATCY	2 cut(s)	748, 934
BstXI	CCANNNNNNTGG	2 cut(s)	614, 977
BstYI	RGATCY	2 cut(s)	748, 934
BstZ17I	GTATAC	1 cut(s)	1417
BstZI	CGGCCG	1 cut(s)	868
Bsu15I	ATCGAT	1 cut(s)	1431
BsuI	GTATCC	3 cut(s)	536, 657, 1675
BsuRI	GGCC	5 cut(s)	315, 619, 870, 1852, 1901
BsuTUI	ATCGAT	1 cut(s)	1431
BtgI	CCRYGG	1 cut(s)	243
BtgZI	GCGATG	2 cut(s)	627, 2015
BtrI	CACGTC	2 cut(s)	459, 786
BtsCI	GGATG	7 cut(s)	212, 324, 767, 1108, 1657, 1901, 2050
BtsI	GCAGTG	4 cut(s)	438, 597, 840, 1534
BtsIMutI	CAGTG	7 cut(s)	141, 438, 597, 840, 1534, 1707, 2173
Cac8I	GCNNGC	4 cut(s)	582, 1264, 1854, 1979
CaiI	CAGNNNCTG	3 cut(s)	449, 511, 1301
Cfr10I	RCCGGY	8 cut(s)	294, 398, 642, 728, 866, 870, 1262, 2239
Cfr13I	GGNCC	5 cut(s)	617, 1163, 1488, 1899, 2163
ClaI	ATCGAT	1 cut(s)	1431
CseI	GACGC	1 cut(s)	2131
Csp6I	GTAC	6 cut(s)	210, 256, 736, 886, 1599, 1810
CspAI	ACCGGT	3 cut(s)	294, 642, 2239
CspCI	CAANNNNNGTGG	2 cut(s)	382, 417
CviAII	CATG	8 cut(s)	136, 244, 577, 733, 753, 1474, 1996, 2126
CviQI	GTAC	6 cut(s)	210, 256, 736, 886, 1599, 1810
DdeI	CTNAG	8 cut(s)	113, 280, 343, 450, 1602, 1794, 1888, 2226
DpnI	GATC	7 cut(s)	750, 936, 1352, 1932, 2147, 2219, 2231
DpnII	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
DraI	TTTAAA	1 cut(s)	1953
DrdI	GACNNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	1 cut(s)	73
EaeI	YGGCCR	2 cut(s)	313, 868
EagI	CGGCCG	1 cut(s)	868
Eam1104I	CTCTTC	3 cut(s)	53, 389, 846
EarI	CTCTTC	3 cut(s)	53, 389, 846
EciI	GGCGGA	1 cut(s)	1520
EclXI	CGGCCG	1 cut(s)	868
Eco130I	CCWWGG	3 cut(s)	243, 607, 1668
Eco24I	GRGCYC	1 cut(s)	1122
Eco32I	GATATC	3 cut(s)	175, 1060, 1757
Eco47I	GGWCC	3 cut(s)	1163, 1488, 2163
Eco52I	CGGCCG	1 cut(s)	868
Eco91I	GGTNACC	1 cut(s)	64
EcoO109I	RGGNCCY	1 cut(s)	1488
EcoO65I	GGTNACC	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	284, 476
EcoRII	CCWGG	3 cut(s)	310, 743, 917
EcoRV	GATATC	3 cut(s)	175, 1060, 1757
EcoT14I	CCWWGG	3 cut(s)	243, 607, 1668
EcoT38I	GRGCYC	1 cut(s)	1122
ErhI	CCWWGG	3 cut(s)	243, 607, 1668
Esp3I	CGTCTC	2 cut(s)	446, 696
FaeI	CATG	8 cut(s)	139, 247, 580, 736, 756, 1477, 1999, 2129
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	3 cut(s)	1474, 2165, 2227
FatI	CATG	8 cut(s)	135, 243, 576, 732, 752, 1473, 1995, 2125
FauI	CCCGC	1 cut(s)	1499
FbaI	TGATCA	1 cut(s)	1930
FblI	GTMKAC	2 cut(s)	788, 1416
Fnu4HI	GCNGC	5 cut(s)	251, 603, 1299, 1359, 1968
FokI	GGATG	7 cut(s)	199, 311, 774, 1115, 1664, 1908, 2057
FriOI	GRGCYC	1 cut(s)	1122
Fsp4HI	GCNGC	5 cut(s)	251, 603, 1299, 1359, 1968
GluI	GCNGC	5 cut(s)	251, 603, 1299, 1359, 1968
GsaI	CCCAGC	3 cut(s)	534, 1305, 1401
GsuI	CTGGAG	3 cut(s)	1272, 1278, 1431
HaeIII	GGCC	5 cut(s)	315, 619, 870, 1852, 1901
HgaI	GACGC	1 cut(s)	2131
Hin1I	GRCGYC	1 cut(s)	1780
Hin1II	CATG	8 cut(s)	139, 247, 580, 736, 756, 1477, 1999, 2129
HincII	GTYRAC	5 cut(s)	789, 876, 1784, 1993, 2208
HindII	GTYRAC	5 cut(s)	789, 876, 1784, 1993, 2208
HindIII	AAGCTT	2 cut(s)	219, 235
HpaI	GTTAAC	1 cut(s)	1993
HphI	GGTGA	4 cut(s)	76, 907, 1610, 1750
Hpy188I	TCNGA	7 cut(s)	130, 283, 346, 1087, 1559, 1804, 2227
Hpy188III	TCNNGA	9 cut(s)	156, 715, 1092, 1111, 1172, 1207, 1524, 1692, 1760
Hpy99I	CGWCG	5 cut(s)	56, 460, 698, 790, 1782
HpyAV	CCTTC	8 cut(s)	422, 1022, 1568, 1735, 1825, 1842, 2046, 2153
HpyCH4III	ACNGT	4 cut(s)	707, 1622, 1711, 1958
HpyCH4IV	ACGT	7 cut(s)	458, 693, 785, 1413, 1626, 1780, 2112
HpyF10VI	GCNNNNNNNGC	4 cut(s)	738, 1246, 1298, 1898
HpyF3I	CTNAG	8 cut(s)	113, 280, 343, 450, 1602, 1794, 1888, 2226
HpySE526I	ACGT	7 cut(s)	458, 693, 785, 1413, 1626, 1780, 2112
Hsp92I	GRCGYC	1 cut(s)	1780
Hsp92II	CATG	8 cut(s)	139, 247, 580, 736, 756, 1477, 1999, 2129
KflI	GGGWCCC	1 cut(s)	1488
KroI	GCCGGC	1 cut(s)	1262
KroNI	GCCGGC	1 cut(s)	1264
Ksp22I	TGATCA	1 cut(s)	1930
KspAI	GTTAAC	1 cut(s)	1993
Kzo9I	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
LmnI	GCTCC	4 cut(s)	377, 746, 1297, 1394
Lsp1109I	GCAGC	3 cut(s)	237, 614, 1979
LweI	GCATC	5 cut(s)	436, 498, 752, 1093, 1964
MaeII	ACGT	7 cut(s)	458, 693, 785, 1413, 1626, 1780, 2112
MaeIII	GTNAC	5 cut(s)	64, 436, 755, 1331, 1622
MalI	GATC	7 cut(s)	750, 936, 1352, 1932, 2147, 2219, 2231
MbiI	CCGCTC	2 cut(s)	372, 741
MboI	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
MboII	GAAGA	9 cut(s)	40, 376, 734, 863, 1054, 1120, 1580, 2141, 2212
MfeI	CAATTG	1 cut(s)	1863
MflI	RGATCY	2 cut(s)	748, 934
MhlI	GDGCHC	5 cut(s)	1026, 1122, 1610, 1637, 1703
MlsI	TGGCCA	1 cut(s)	315
MluI	ACGCGT	1 cut(s)	546
MluNI	TGGCCA	1 cut(s)	315
MlyI	GAGTC	4 cut(s)	83, 1279, 1521, 2034
MmeI	TCCRAC	2 cut(s)	119, 1277
Mox20I	TGGCCA	1 cut(s)	315
MroNI	GCCGGC	1 cut(s)	1262
MscI	TGGCCA	1 cut(s)	315
MseI	TTAA	5 cut(s)	486, 1098, 1790, 1952, 1992
MslI	CAYNNNNRTG	6 cut(s)	668, 731, 1736, 1917, 1986, 2000
Msp20I	TGGCCA	1 cut(s)	315
MspA1I	CMGCKG	2 cut(s)	668, 1301
MspR9I	CCNGG	4 cut(s)	312, 745, 919, 1766
MunI	CAATTG	1 cut(s)	1863
MvaI	CCWGG	3 cut(s)	312, 745, 919
MvnI	CGCG	2 cut(s)	548, 1494
MwoI	GCNNNNNNNGC	4 cut(s)	738, 1246, 1298, 1898
NaeI	GCCGGC	1 cut(s)	1264
NciI	CCSGG	1 cut(s)	1766
NcoI	CCATGG	1 cut(s)	243
NdeII	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
NgoMIV	GCCGGC	1 cut(s)	1262
NlaIII	CATG	8 cut(s)	139, 247, 580, 736, 756, 1477, 1999, 2129
NlaIV	GGNNCC	7 cut(s)	634, 750, 1165, 1489, 1490, 1609, 2164
NmuCI	GTSAC	4 cut(s)	64, 436, 755, 1622
NspI	RCATGY	1 cut(s)	736
OliI	CACNNNNGTG	2 cut(s)	668, 1736
PdiI	GCCGGC	1 cut(s)	1264
Pfl23II	CGTACG	1 cut(s)	255
PflMI	CCANNNNNTGG	1 cut(s)	1301
PinAI	ACCGGT	3 cut(s)	294, 642, 2239
PkrI	GCNGC	5 cut(s)	252, 604, 1300, 1360, 1969
PleI	GAGTC	4 cut(s)	82, 1279, 1521, 2033
PpsI	GAGTC	4 cut(s)	82, 1279, 1521, 2033
PpuMI	RGGWCCY	1 cut(s)	1488
Psp5II	RGGWCCY	1 cut(s)	1488
Psp6I	CCWGG	3 cut(s)	310, 743, 917
PspEI	GGTNACC	1 cut(s)	64
PspFI	CCCAGC	3 cut(s)	530, 1301, 1397
PspGI	CCWGG	3 cut(s)	310, 743, 917
PspLI	CGTACG	1 cut(s)	255
PspN4I	GGNNCC	7 cut(s)	634, 750, 1165, 1489, 1490, 1609, 2164
PspPI	GGNCC	5 cut(s)	617, 1163, 1488, 1899, 2163
PspPPI	RGGWCCY	1 cut(s)	1488
PstI	CTGCAG	2 cut(s)	445, 604
PstNI	CAGNNNCTG	3 cut(s)	449, 511, 1301
PsuI	RGATCY	2 cut(s)	748, 934
RsaI	GTAC	6 cut(s)	211, 257, 737, 887, 1600, 1811
RsaNI	GTAC	6 cut(s)	210, 256, 736, 886, 1599, 1810
RseI	CAYNNNNRTG	6 cut(s)	668, 731, 1736, 1917, 1986, 2000
SalI	GTCGAC	1 cut(s)	787
SaqAI	TTAA	5 cut(s)	486, 1098, 1790, 1952, 1992
SatI	GCNGC	5 cut(s)	251, 603, 1299, 1359, 1968
Sau3AI	GATC	7 cut(s)	748, 934, 1350, 1930, 2145, 2217, 2229
Sau96I	GGNCC	5 cut(s)	617, 1163, 1488, 1899, 2163
SchI	GAGTC	4 cut(s)	83, 1279, 1521, 2034
ScrFI	CCNGG	4 cut(s)	312, 745, 919, 1766
SduI	GDGCHC	5 cut(s)	1026, 1122, 1610, 1637, 1703
SfaNI	GCATC	5 cut(s)	436, 498, 752, 1093, 1964
SfcI	CTRYAG	4 cut(s)	195, 441, 600, 930
SinI	GGWCC	3 cut(s)	1163, 1488, 2163
SmiMI	CAYNNNNRTG	6 cut(s)	668, 731, 1736, 1917, 1986, 2000
SmlI	CTYRAG	1 cut(s)	1279
SmoI	CTYRAG	1 cut(s)	1279
StyD4I	CCNGG	4 cut(s)	310, 743, 917, 1764
StyI	CCWWGG	3 cut(s)	243, 607, 1668
TaaI	ACNGT	4 cut(s)	707, 1622, 1711, 1958
TaiI	ACGT	7 cut(s)	461, 696, 788, 1416, 1629, 1783, 2115
TatI	WGTACW	3 cut(s)	209, 885, 1809
TauI	GCSGC	2 cut(s)	1301, 1361
Tru1I	TTAA	5 cut(s)	486, 1098, 1790, 1952, 1992
Tru9I	TTAA	5 cut(s)	486, 1098, 1790, 1952, 1992
TscAI	CASTG	7 cut(s)	148, 445, 604, 847, 1541, 1714, 2173
TseFI	GTSAC	4 cut(s)	64, 436, 755, 1622
TseI	GCWGC	3 cut(s)	250, 602, 1967
Tsp45I	GTSAC	4 cut(s)	64, 436, 755, 1622
TspGWI	ACGGA	4 cut(s)	774, 1232, 1520, 2185
TspRI	CASTG	7 cut(s)	148, 445, 604, 847, 1541, 1714, 2173
Van91I	CCANNNNNTGG	1 cut(s)	1301
VpaK11BI	GGWCC	3 cut(s)	1163, 1488, 2163
XapI	RAATTY	6 cut(s)	284, 476, 818, 1081, 1678, 1948
XceI	RCATGY	1 cut(s)	736
XmiI	GTMKAC	2 cut(s)	788, 1416
ZraI	GACGTC	1 cut(s)	1781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.