Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000427.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

42013 .. 44535

Gene Structure 2523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000427.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

atgaaaccaatcgtcactcttctttacctctccttgtttctccacatcctcactctctttgtcgccggtcaggcgccaccatacactcctgttgacaatatcaccctcgcctgcggcaattccggccaaccgagctccaatgtcgacctcagaaagtggagtggagatatcgactcaaaattcaccccaataggtaacgcatcccaatccatagatgcaccgcggtcgtccaccgccagcgacgtcccttacaccaaagctcggctctctcgctccaaattcacttacacaattcccctctctcccggccaaaagttcatccgcttgcatttcaatccagatacatacaacccgaacttccaacgctccaactccctcttctccgtcaccgccgccggcttcactctccttaaagacttcaacgcctccgtcaccgcagacgcttccggcgagtcctcgctggtcagagaattctgtttaaacatggagacaggagagggactcaacatcaccttcacaccaagcaaagatgcgtacgctttcatcaacggaatcgaaatcgtgtccatgcccaccggtctttactatacttcttcagctaatttcttcgagaccatcacaggctcatatccgatcggaaacaacacagctctggagatggtgtaccgaatcaacgtcggcggagcccccatctcgccgaacgaagacacaggaatgtaccggacttgggacacggccgacgaaatttacttggatgatataagtaaaaaattgagcgtgctaccacagaacaatactatcgagctcaatttcgtcaaagttccagaatactctgccccaaaaccagtttacacaacaggtcggtcaatggggatgaacaaaaccatcaacaagagctataacctcacatgggtatttcccttagatcccaagttttattacctggtgagactccatttctgtgagtttgaatctgatattaccaagtatggtgatcgatcgtttcaaatctacatggccaatcaaaccgcagaagaaattgcagatgtcatcggatggagtggagctaatgggaatccagtttacagagactacgttgtgggcatgttcatggctccggttggaagcaagaagaaagttaacctctttctagaacttgcaccgctacagagagattcgtatactacttacaatgatgccatcttgaacgggctggaaatcttcaagctcaatgactcaaatgggaatcttgccggacccaaccccgattcacctccactaaggcagcaaatccccaaaagttcaaccacaagtaaatcacatgcttctttgttgcccatcatagttgctgtactctacggagtcctagctcttctctctgttcttggaattttagtattcaggcgaggaaggaaagtcgaggagtctagttccagccagggaaagttgactttaccgtcctgtttgtgtcgttacttttcactaccggaaatgaaagccgccactcaaaacttcaatgattcttgcattataggagttggagggtttggccatgtgtacgaaggatttcttgcggatggggctacccatgttgcaatcaaacggttgaaagccatatcatcacaaggggcccgcgagttttggacggaaattgagatgctctctcgaattcgtcaccgccatttagtgtctcttattggatactgtgccgatgaaggtgagatgatcttggtgtatgattacatggcacgtgggactcttggtgaccatctccaccgcactgataatccacctctttcgtgggaacaacggcttcaaatttgtattggtgcagcacaaggtttgcactatctacatacaggtactaagggcaccatcattcaccgagatgtgaagagcacaaacatattattggatgagaaatgggtagccaaagtttcagattttgggttgtcaaagaatggcacaatcaccctttccaagacccacattagcacaaaggtgaagggtagttttggatatcttgaccccgaatactatcgacgtcaacaattgactgagaagtctgatgtgtactcatttggcgtgattttgtgtgaggtattgtctggaaggccggccgtgactaccgtggacaataatcgagtcggtctggttggatggaccaagaagtgtcatggtaatgggaaacttgatcaaattattgacccaaatttgaagggtaaaattgcagtgagatgcttgcatcaatttgtttccatcgcaatgcgttgcatggatgataatgggatcaatcggccatcaatggacgatgttgtgggagagcttcaatttgcattgaagatgcaacaaaacgacgaggactatactaattgcggtgaaatgacagttcaagatagaattgcattgatcaaggacaatgaagggtcttgttctagtgagcaaagtagtggggcgaacgaatccgtccaagggttgactggcacaatcttctccgagatcatctatccggttgggagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

840

Amino Acids

92.9

Weight (kDa)

6.49

Isoelectric Point (pI)

35.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1456, 2062
AatII	GACGTC	2 cut(s)	246, 2047
AccB1I	GGYRCC	2 cut(s)	73, 1871
AccI	GTMKAC	2 cut(s)	144, 1181
AccII	CGCG	2 cut(s)	223, 1635
AclWI	GGATC	2 cut(s)	920, 2297
AcoI	YGGCCR	7 cut(s)	124, 307, 735, 1017, 1549, 2118, 2297
AcsI	RAATTY	8 cut(s)	179, 278, 470, 744, 1389, 1668, 1818, 2212
AcuI	CTGAAG	1 cut(s)	579
AcvI	CACGTG	1 cut(s)	1751
AcyI	GRCGYC	3 cut(s)	74, 243, 2044
AfaI	GTAC	7 cut(s)	536, 665, 719, 1353, 1559, 1864, 2075
AfiI	CCNNNNNNNGG	4 cut(s)	261, 727, 910, 2472
AgeI	ACCGGT	1 cut(s)	575
AjnI	CCWGG	2 cut(s)	942, 1437
AjuI	GAANNNNNNNTTGG	2 cut(s)	362, 394
AleI	CACNNNNGTG	1 cut(s)	2000
Alw21I	GWGCWC	3 cut(s)	137, 807, 1901
Alw26I	GTCTC	5 cut(s)	482, 605, 943, 1083, 1695
AlwI	GGATC	2 cut(s)	920, 2297
AoxI	GGCC	9 cut(s)	124, 307, 735, 1017, 1549, 1629, 2114, 2118, 2297
ApaI	GGGCCC	1 cut(s)	1633
ApeKI	GCWGC	2 cut(s)	1285, 1832
ApoI	RAATTY	8 cut(s)	179, 278, 470, 744, 1389, 1668, 1818, 2212
AsiGI	ACCGGT	1 cut(s)	575
Asp700I	GAANNNNTTC	1 cut(s)	1566
AspLEI	GCGC	1 cut(s)	76
AspS9I	GGNCC	4 cut(s)	1256, 1629, 1630, 2163
AsuC2I	CCSGG	1 cut(s)	306
AvaII	GGWCC	2 cut(s)	1256, 2163
BaeGI	GKGCMC	2 cut(s)	1633, 1874
BalI	TGGCCA	2 cut(s)	1019, 1551
BanI	GGYRCC	2 cut(s)	73, 1871
BanII	GRGCYC	4 cut(s)	137, 688, 807, 1633
BbrPI	CACGTG	1 cut(s)	1751
BbsI	GAAGAC	1 cut(s)	711
Bbv12I	GWGCWC	3 cut(s)	137, 807, 1901
BbvI	GCAGC	2 cut(s)	1297, 1844
BceAI	ACGGC	3 cut(s)	750, 1826, 2105
BcgI	CGANNNNNNTGC	2 cut(s)	207, 241
BciT130I	CCWGG	2 cut(s)	944, 1439
BciVI	GTATCC	1 cut(s)	1694
BclI	TGATCA	2 cut(s)	2194, 2409
BcnI	CCSGG	1 cut(s)	306
BcoDI	GTCTC	5 cut(s)	482, 605, 943, 1083, 1695
BfaI	CTAG	4 cut(s)	1151, 1367, 1428, 2436
BfmI	CTRYAG	1 cut(s)	1166
BfoI	RGCGCY	1 cut(s)	77
BfuI	GTATCC	1 cut(s)	1694
BglI	GCCNNNNNGGC	1 cut(s)	71
BisI	GCNGC	5 cut(s)	115, 393, 1286, 1500, 1833
BlsI	GCNGC	5 cut(s)	116, 394, 1287, 1501, 1834
Bme1390I	CCNGG	3 cut(s)	306, 944, 1439
Bme18I	GGWCC	2 cut(s)	1256, 2163
BmgT120I	GGNCC	4 cut(s)	1256, 1629, 1630, 2163
BmiI	GGNNCC	7 cut(s)	75, 685, 1116, 1258, 1630, 1631, 1873
BmrFI	CCNGG	3 cut(s)	306, 944, 1439
BmsI	GCATC	8 cut(s)	205, 209, 520, 1186, 1647, 2228, 2254, 2334
BpiI	GAAGAC	1 cut(s)	711
BplI	GAGNNNNNCTC	4 cut(s)	486, 518, 1646, 1678
BpmI	CTGGAG	1 cut(s)	674
BpuMI	CCSGG	1 cut(s)	306
Bsa29I	ATCGAT	1 cut(s)	997
BsaAI	YACGTR	1 cut(s)	1751
BsaHI	GRCGYC	3 cut(s)	74, 243, 2044
BsaI	GGTCTC	1 cut(s)	605
BsaJI	CCNNGG	4 cut(s)	221, 1438, 2130, 2470
BsaWI	WCCGGW	5 cut(s)	575, 720, 1117, 1486, 2509
BsaXI	ACNNNNNCTCC	2 cut(s)	647, 677
Bsc4I	CCNNNNNNNGG	4 cut(s)	261, 727, 910, 2472
Bse118I	RCCGGY	4 cut(s)	65, 395, 575, 2116
Bse1I	ACTGG	3 cut(s)	845, 1079, 2485
Bse3DI	GCAATG	1 cut(s)	2271
BseBI	CCWGG	2 cut(s)	944, 1439
BseCI	ATCGAT	1 cut(s)	997
BseDI	CCNNGG	4 cut(s)	221, 1438, 2130, 2470
BseLI	CCNNNNNNNGG	4 cut(s)	261, 727, 910, 2472
BseMI	GCAATG	1 cut(s)	2271
BseMII	CTCAG	2 cut(s)	163, 2049
BseNI	ACTGG	3 cut(s)	845, 1079, 2485
BseRI	GAGGAG	1 cut(s)	1436
BseSI	GKGCMC	2 cut(s)	1633, 1874
BseX3I	CGGCCG	2 cut(s)	735, 2118
BseXI	GCAGC	2 cut(s)	1297, 1844
BsgI	GTGCAG	1 cut(s)	1851
Bsh1236I	CGCG	2 cut(s)	223, 1635
Bsh1285I	CGRYCG	5 cut(s)	227, 636, 738, 1001, 2121
BshFI	GGCC	9 cut(s)	126, 309, 737, 1019, 1551, 1631, 2116, 2120, 2299
BshNI	GGYRCC	2 cut(s)	73, 1871
BshTI	ACCGGT	1 cut(s)	575
BshVI	ATCGAT	1 cut(s)	997
BsiEI	CGRYCG	5 cut(s)	227, 636, 738, 1001, 2121
BsiHKAI	GWGCWC	3 cut(s)	137, 807, 1901
BsiWI	CGTACG	1 cut(s)	534
BslFI	GGGAC	4 cut(s)	230, 513, 743, 1768
BslI	CCNNNNNNNGG	4 cut(s)	261, 727, 910, 2472
BsmAI	GTCTC	5 cut(s)	482, 605, 943, 1083, 1695
BsmFI	GGGAC	4 cut(s)	230, 513, 743, 1768
BsnI	GGCC	9 cut(s)	126, 309, 737, 1019, 1551, 1631, 2116, 2120, 2299
Bso31I	GGTCTC	1 cut(s)	605
Bsp120I	GGGCCC	1 cut(s)	1629
Bsp1286I	GDGCHC	6 cut(s)	137, 688, 807, 1633, 1874, 1901
Bsp143I	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
BspANI	GGCC	9 cut(s)	126, 309, 737, 1019, 1551, 1631, 2116, 2120, 2299
BspCNI	CTCAG	2 cut(s)	162, 2050
BspDI	ATCGAT	1 cut(s)	997
BspFNI	CGCG	2 cut(s)	223, 1635
BspLI	GGNNCC	7 cut(s)	75, 685, 1116, 1258, 1630, 1631, 1873
BspPI	GGATC	2 cut(s)	920, 2297
BspQI	GCTCTTC	2 cut(s)	1377, 1889
BspT107I	GGYRCC	2 cut(s)	73, 1871
BspTNI	GGTCTC	1 cut(s)	605
BsrDI	GCAATG	1 cut(s)	2271
BsrFI	RCCGGY	4 cut(s)	65, 395, 575, 2116
BsrI	ACTGG	3 cut(s)	845, 1079, 2485
BssAI	RCCGGY	4 cut(s)	65, 395, 575, 2116
BssECI	CCNNGG	4 cut(s)	221, 1438, 2130, 2470
BssMI	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
BssNAI	GTATAC	1 cut(s)	1182
BssNI	GRCGYC	3 cut(s)	74, 243, 2044
BssT1I	CCWWGG	1 cut(s)	2470
Bst1107I	GTATAC	1 cut(s)	1182
Bst2UI	CCWGG	2 cut(s)	944, 1439
Bst4CI	ACNGT	5 cut(s)	1458, 1605, 1706, 2131, 2389
Bst6I	CTCTTC	4 cut(s)	24, 383, 1377, 1889
BstACI	GRCGYC	3 cut(s)	74, 243, 2044
BstBAI	YACGTR	1 cut(s)	1751
BstC8I	GCNNGC	8 cut(s)	112, 238, 326, 397, 779, 1633, 2118, 2243
BstDEI	CTNAG	5 cut(s)	149, 922, 1280, 1866, 2058
BstDSI	CCRYGG	2 cut(s)	221, 2130
BstEII	GGTNACC	1 cut(s)	1763
BstFNI	CGCG	2 cut(s)	223, 1635
BstH2I	RGCGCY	1 cut(s)	77
BstHHI	GCGC	1 cut(s)	76
BstKTI	GATC	9 cut(s)	636, 928, 997, 1001, 1728, 2197, 2292, 2412, 2502
BstMAI	GTCTC	5 cut(s)	482, 605, 943, 1083, 1695
BstMBI	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
BstMCI	CGRYCG	5 cut(s)	227, 636, 738, 1001, 2121
BstMWI	GCNNNNNNNGC	4 cut(s)	71, 123, 132, 1580
BstNI	CCWGG	2 cut(s)	944, 1439
BstNSI	RCATGY	2 cut(s)	1108, 1325
BstPI	GGTNACC	1 cut(s)	1763
BstSCI	CCNGG	3 cut(s)	304, 942, 1437
BstSFI	CTRYAG	1 cut(s)	1166
BstSLI	GKGCMC	2 cut(s)	1633, 1874
BstUI	CGCG	2 cut(s)	223, 1635
BstV1I	GCAGC	2 cut(s)	1297, 1844
BstV2I	GAAGAC	1 cut(s)	711
BstX2I	RGATCY	1 cut(s)	925
BstYI	RGATCY	1 cut(s)	925
BstZ17I	GTATAC	1 cut(s)	1182
BstZI	CGGCCG	2 cut(s)	735, 2118
Bsu15I	ATCGAT	1 cut(s)	997
BsuI	GTATCC	1 cut(s)	1694
BsuRI	GGCC	9 cut(s)	126, 309, 737, 1019, 1551, 1631, 2116, 2120, 2299
BsuTUI	ATCGAT	1 cut(s)	997
BtgI	CCRYGG	2 cut(s)	221, 2130
BtgZI	GCGATG	1 cut(s)	2245
BtsI	GCAGTG	1 cut(s)	2238
BtsIMutI	CAGTG	2 cut(s)	1779, 2238
Cac8I	GCNNGC	8 cut(s)	112, 238, 326, 397, 779, 1633, 2118, 2243
CfoI	GCGC	1 cut(s)	76
Cfr10I	RCCGGY	4 cut(s)	65, 395, 575, 2116
Cfr13I	GGNCC	4 cut(s)	1256, 1629, 1630, 2163
Cfr42I	CCGCGG	1 cut(s)	224
ClaI	ATCGAT	1 cut(s)	997
CseI	GACGC	1 cut(s)	449
CsiI	ACCWGGT	1 cut(s)	942
Csp6I	GTAC	7 cut(s)	535, 664, 718, 1352, 1558, 1863, 2074
CspAI	ACCGGT	1 cut(s)	575
CviQI	GTAC	7 cut(s)	535, 664, 718, 1352, 1558, 1863, 2074
DdeI	CTNAG	5 cut(s)	149, 922, 1280, 1866, 2058
DinI	GGCGCC	1 cut(s)	75
DpnI	GATC	9 cut(s)	635, 927, 996, 1000, 1727, 2196, 2291, 2411, 2501
DpnII	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
DraI	TTTAAA	1 cut(s)	480
DrdI	GACNNNNNNGTC	2 cut(s)	1456, 2062
DseDI	GACNNNNNNGTC	2 cut(s)	1456, 2062
EaeI	YGGCCR	7 cut(s)	124, 307, 735, 1017, 1549, 2118, 2297
EagI	CGGCCG	2 cut(s)	735, 2118
Eam1104I	CTCTTC	4 cut(s)	24, 383, 1377, 1889
EarI	CTCTTC	4 cut(s)	24, 383, 1377, 1889
EciI	GGCGGA	1 cut(s)	696
Ecl136II	GAGCTC	2 cut(s)	135, 805
EclXI	CGGCCG	2 cut(s)	735, 2118
Eco130I	CCWWGG	1 cut(s)	2470
Eco24I	GRGCYC	4 cut(s)	137, 688, 807, 1633
Eco31I	GGTCTC	1 cut(s)	605
Eco32I	GATATC	2 cut(s)	169, 2021
Eco47I	GGWCC	2 cut(s)	1256, 2163
Eco52I	CGGCCG	2 cut(s)	735, 2118
Eco53kI	GAGCTC	2 cut(s)	135, 805
Eco57I	CTGAAG	1 cut(s)	579
Eco72I	CACGTG	1 cut(s)	1751
Eco91I	GGTNACC	1 cut(s)	1763
EcoICRI	GAGCTC	2 cut(s)	135, 805
EcoO109I	RGGNCCY	1 cut(s)	1629
EcoO65I	GGTNACC	1 cut(s)	1763
EcoRI	GAATTC	2 cut(s)	470, 1668
EcoRII	CCWGG	2 cut(s)	942, 1437
EcoRV	GATATC	2 cut(s)	169, 2021
EcoT14I	CCWWGG	1 cut(s)	2470
EcoT38I	GRGCYC	4 cut(s)	137, 688, 807, 1633
EgeI	GGCGCC	1 cut(s)	75
EheI	GGCGCC	1 cut(s)	75
ErhI	CCWWGG	1 cut(s)	2470
FalI	AAGNNNNNCTT	2 cut(s)	1554, 1586
FaqI	GGGAC	4 cut(s)	230, 513, 743, 1768
FauI	CCCGC	1 cut(s)	1640
FbaI	TGATCA	2 cut(s)	2194, 2409
FblI	GTMKAC	2 cut(s)	144, 1181
Fnu4HI	GCNGC	5 cut(s)	115, 393, 1286, 1500, 1833
FriOI	GRGCYC	4 cut(s)	137, 688, 807, 1633
FseI	GGCCGGCC	1 cut(s)	2120
Fsp4HI	GCNGC	5 cut(s)	115, 393, 1286, 1500, 1833
FspBI	CTAG	4 cut(s)	1151, 1367, 1428, 2436
GlaI	GCGC	1 cut(s)	75
GluI	GCNGC	5 cut(s)	115, 393, 1286, 1500, 1833
GsuI	CTGGAG	1 cut(s)	674
HaeII	RGCGCY	1 cut(s)	77
HaeIII	GGCC	9 cut(s)	126, 309, 737, 1019, 1551, 1631, 2116, 2120, 2299
HgaI	GACGC	1 cut(s)	449
HhaI	GCGC	1 cut(s)	76
Hin1I	GRCGYC	3 cut(s)	74, 243, 2044
Hin6I	GCGC	1 cut(s)	74
HinP1I	GCGC	1 cut(s)	74
HincII	GTYRAC	6 cut(s)	94, 145, 1141, 1449, 2048, 2478
HindII	GTYRAC	6 cut(s)	94, 145, 1141, 1449, 2048, 2478
HpaI	GTTAAC	1 cut(s)	1141
Hpy188I	TCNGA	9 cut(s)	152, 467, 633, 638, 976, 1055, 1942, 2068, 2497
Hpy99I	CGWCG	5 cut(s)	245, 680, 743, 2046, 2360
HpyAV	CCTTC	8 cut(s)	523, 1404, 1556, 1709, 1999, 2106, 2212, 2417
HpyCH4III	ACNGT	5 cut(s)	1458, 1605, 1706, 2131, 2389
HpyCH4IV	ACGT	5 cut(s)	243, 675, 1095, 1750, 2044
HpyF10VI	GCNNNNNNNGC	4 cut(s)	71, 123, 132, 1580
HpyF3I	CTNAG	5 cut(s)	149, 922, 1280, 1866, 2058
HpySE526I	ACGT	5 cut(s)	243, 675, 1095, 1750, 2044
Hsp92I	GRCGYC	3 cut(s)	74, 243, 2044
HspAI	GCGC	1 cut(s)	74
KasI	GGCGCC	1 cut(s)	73
KroI	GCCGGC	2 cut(s)	395, 2116
KroNI	GCCGGC	2 cut(s)	397, 2118
Ksp22I	TGATCA	2 cut(s)	2194, 2409
KspAI	GTTAAC	1 cut(s)	1141
KspI	CCGCGG	1 cut(s)	224
Kzo9I	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
LguI	GCTCTTC	2 cut(s)	1377, 1889
LmnI	GCTCC	6 cut(s)	140, 278, 371, 683, 1064, 1120
Lsp1109I	GCAGC	2 cut(s)	1297, 1844
LweI	GCATC	8 cut(s)	205, 209, 520, 1186, 1647, 2228, 2254, 2334
MabI	ACCWGGT	1 cut(s)	942
MaeI	CTAG	4 cut(s)	1151, 1367, 1428, 2436
MaeII	ACGT	5 cut(s)	243, 675, 1095, 1750, 2044
MaeIII	GTNAC	8 cut(s)	13, 194, 385, 430, 1472, 1673, 1763, 2122
MalI	GATC	9 cut(s)	635, 927, 996, 1000, 1727, 2196, 2291, 2411, 2501
MboI	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
MfeI	CAATTG	1 cut(s)	2051
MflI	RGATCY	1 cut(s)	925
MhlI	GDGCHC	6 cut(s)	137, 688, 807, 1633, 1874, 1901
MlsI	TGGCCA	2 cut(s)	1019, 1551
MluNI	TGGCCA	2 cut(s)	1019, 1551
Mly113I	GGCGCC	1 cut(s)	74
MlyI	GAGTC	9 cut(s)	167, 461, 495, 945, 1229, 1371, 1433, 1750, 2154
MmeI	TCCRAC	5 cut(s)	385, 393, 1102, 1519, 2137
Mox20I	TGGCCA	2 cut(s)	1019, 1551
MroNI	GCCGGC	2 cut(s)	395, 2116
MroXI	GAANNNNTTC	1 cut(s)	1566
MscI	TGGCCA	2 cut(s)	1019, 1551
MseI	TTAA	3 cut(s)	411, 479, 1140
MslI	CAYNNNNRTG	7 cut(s)	713, 960, 1109, 1887, 2000, 2181, 2264
Msp20I	TGGCCA	2 cut(s)	1019, 1551
MspA1I	CMGCKG	1 cut(s)	223
MspR9I	CCNGG	3 cut(s)	306, 944, 1439
MssI	GTTTAAAC	1 cut(s)	480
MunI	CAATTG	1 cut(s)	2051
MvaI	CCWGG	2 cut(s)	944, 1439
MvnI	CGCG	2 cut(s)	223, 1635
MwoI	GCNNNNNNNGC	4 cut(s)	71, 123, 132, 1580
NaeI	GCCGGC	2 cut(s)	397, 2118
NarI	GGCGCC	1 cut(s)	74
NciI	CCSGG	1 cut(s)	306
NdeII	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
NgoMIV	GCCGGC	2 cut(s)	395, 2116
NlaIV	GGNNCC	7 cut(s)	75, 685, 1116, 1258, 1630, 1631, 1873
NmeAIII	GCCGAG	1 cut(s)	241
NmuCI	GTSAC	6 cut(s)	13, 385, 430, 1673, 1763, 2122
NspI	RCATGY	2 cut(s)	1108, 1325
OliI	CACNNNNGTG	1 cut(s)	2000
PciSI	GCTCTTC	2 cut(s)	1377, 1889
PcsI	WCGNNNNNNNCGW	1 cut(s)	447
PdiI	GCCGGC	2 cut(s)	397, 2118
PdmI	GAANNNNTTC	1 cut(s)	1566
PfeI	GAWTC	9 cut(s)	552, 669, 971, 1075, 1175, 1246, 1268, 1520, 2462
Pfl23II	CGTACG	1 cut(s)	534
PinAI	ACCGGT	1 cut(s)	575
PkrI	GCNGC	5 cut(s)	116, 394, 1287, 1501, 1834
Ple19I	CGATCG	2 cut(s)	636, 1001
PleI	GAGTC	9 cut(s)	167, 460, 495, 945, 1229, 1370, 1432, 1750, 2153
PluTI	GGCGCC	1 cut(s)	77
PmaCI	CACGTG	1 cut(s)	1751
PmeI	GTTTAAAC	1 cut(s)	480
PmlI	CACGTG	1 cut(s)	1751
PpsI	GAGTC	9 cut(s)	167, 460, 495, 945, 1229, 1370, 1432, 1750, 2153
Ppu21I	YACGTR	1 cut(s)	1751
Psp124BI	GAGCTC	2 cut(s)	137, 807
Psp6I	CCWGG	2 cut(s)	942, 1437
PspCI	CACGTG	1 cut(s)	1751
PspEI	GGTNACC	1 cut(s)	1763
PspGI	CCWGG	2 cut(s)	942, 1437
PspLI	CGTACG	1 cut(s)	534
PspN4I	GGNNCC	7 cut(s)	75, 685, 1116, 1258, 1630, 1631, 1873
PspOMI	GGGCCC	1 cut(s)	1629
PspPI	GGNCC	4 cut(s)	1256, 1629, 1630, 2163
PsuI	RGATCY	1 cut(s)	925
PvuI	CGATCG	2 cut(s)	636, 1001
RigI	GGCCGGCC	1 cut(s)	2120
RsaI	GTAC	7 cut(s)	536, 665, 719, 1353, 1559, 1864, 2075
RsaNI	GTAC	7 cut(s)	535, 664, 718, 1352, 1558, 1863, 2074
RseI	CAYNNNNRTG	7 cut(s)	713, 960, 1109, 1887, 2000, 2181, 2264
SacI	GAGCTC	2 cut(s)	137, 807
SacII	CCGCGG	1 cut(s)	224
SalI	GTCGAC	1 cut(s)	143
SapI	GCTCTTC	2 cut(s)	1377, 1889
SaqAI	TTAA	3 cut(s)	411, 479, 1140
SatI	GCNGC	5 cut(s)	115, 393, 1286, 1500, 1833
Sau3AI	GATC	9 cut(s)	633, 925, 994, 998, 1725, 2194, 2289, 2409, 2499
Sau96I	GGNCC	4 cut(s)	1256, 1629, 1630, 2163
SchI	GAGTC	9 cut(s)	167, 461, 495, 945, 1229, 1371, 1433, 1750, 2154
ScrFI	CCNGG	3 cut(s)	306, 944, 1439
SduI	GDGCHC	6 cut(s)	137, 688, 807, 1633, 1874, 1901
SexAI	ACCWGGT	1 cut(s)	942
SfaNI	GCATC	8 cut(s)	205, 209, 520, 1186, 1647, 2228, 2254, 2334
SfcI	CTRYAG	1 cut(s)	1166
SfoI	GGCGCC	1 cut(s)	75
Sfr303I	CCGCGG	1 cut(s)	224
SgrBI	CCGCGG	1 cut(s)	224
SinI	GGWCC	2 cut(s)	1256, 2163
SmiMI	CAYNNNNRTG	7 cut(s)	713, 960, 1109, 1887, 2000, 2181, 2264
SspDI	GGCGCC	1 cut(s)	73
SspMI	CTAG	4 cut(s)	1151, 1367, 1428, 2436
SstI	GAGCTC	2 cut(s)	137, 807
StyD4I	CCNGG	3 cut(s)	304, 942, 1437
StyI	CCWWGG	1 cut(s)	2470
TaaI	ACNGT	5 cut(s)	1458, 1605, 1706, 2131, 2389
TaiI	ACGT	5 cut(s)	246, 678, 1098, 1753, 2047
TaqII	GACCGA	2 cut(s)	852, 2138
TatI	WGTACW	2 cut(s)	1351, 2073
TauI	GCSGC	3 cut(s)	117, 395, 1502
TfiI	GAWTC	9 cut(s)	552, 669, 971, 1075, 1175, 1246, 1268, 1520, 2462
Tru1I	TTAA	3 cut(s)	411, 479, 1140
Tru9I	TTAA	3 cut(s)	411, 479, 1140
TscAI	CASTG	2 cut(s)	1786, 2238
TseFI	GTSAC	6 cut(s)	13, 385, 430, 1673, 1763, 2122
TseI	GCWGC	2 cut(s)	1285, 1832
Tsp45I	GTSAC	6 cut(s)	13, 385, 430, 1673, 1763, 2122
TspDTI	ATGAA	8 cut(s)	17, 307, 532, 890, 1099, 1508, 1728, 2436
TspGWI	ACGGA	6 cut(s)	373, 418, 564, 1374, 1661, 2455
TspRI	CASTG	2 cut(s)	1786, 2238
VpaK11BI	GGWCC	2 cut(s)	1256, 2163
XapI	RAATTY	8 cut(s)	179, 278, 470, 744, 1389, 1668, 1818, 2212
XbaI	TCTAGA	1 cut(s)	1150
XceI	RCATGY	2 cut(s)	1108, 1325
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1797, 2477
XmiI	GTMKAC	2 cut(s)	144, 1181
XmnI	GAANNNNTTC	1 cut(s)	1566
XspI	CTAG	4 cut(s)	1151, 1367, 1428, 2436
ZraI	GACGTC	2 cut(s)	244, 2045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.