Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00430

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

7822 .. 10374

Gene Structure 2553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G010290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2553 bp

ATGAAACCAATTCTCGCTCCTCTCTACCCTTTCAGCTTCCTCTTCGTCACCCTACTGGTGACCGGAGAGTCCACAACCATCTACTCTCCAACCGATGTTATCAACCTTGACTGTGGCTCATCCGGCGACACGGTTGACTATGATTCTCGAACTTGGAGTGGAGATATCAACTCAAAGCTTTCCCCTATAGAAGTTGGTAGTGCATCCCAAGTTTTAAAAGCACCACCGTCGTCCTCCACGGGCAGCCAAGTACCGTACACCACAGCACGGCTTTCTCGCTCGGAATTCACTTACCGATTTCCCGTCAGTCCCGGCCAGAAGTTCATTCGCTTATACTTTTACCCAGGCTCATACAACGCTGACTTCGACCGCTCCAAGTCCCTCTTCTCTGTCAAAGCCGGTGGCTATAACTACACCCTTCTCAAAGACTTCAACGCTTCTGTCAGTGCAGAAGCCGATTATGTTCAGACGATGCTTAAAGAATTCTGTATTAACATTGAGCCAGAACAACAGATGCTGAACATCACATTCACTCCCAGCAAAGATGGATATGGGTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTATCTCTACTACACTGCCGCCCAAGGCGATGGGCCTAGTGTTATAGGCACCGAAAACCGGAACCCAGTGGAAAACAACACCGCTATGGAGATGATCTATCGAATCAACGTCGGCGGAAGTCTAGTCTCACCGAATGAAGATACGGGCATGTACCGCAACTGGGATTCAACAGACGCGATCTACTTAAATAGTCACAGTAGAACTTCGAGCATGTTATCACAAAGCAATAATACTCATCTCAAATTTGCAAAAATCCCGAACTACACTGCGCCGGTAGATGTTTACCGAAGCGGCCGGTCAATGGGCCTGAACGGAACCATCAGCAAGAGCTATAATCTCACCTGGGGGTTTCCTGTAGATCCACAATTTGATTACCTGGTGAGGCTCCATTTTTGTGAAATTATATTTGAGTTGGAGCAAGATCGTGTGTTTCAGATTTTTATAGCCGACCAACCAGCGGAACAGAAAGCGGACATAATCCAATGGAGTGGAGGAAAAGGGATTCCCGTATATAGAGACTACCTTGTGTTCGTGCCCAGTCTTCCAAACCAGGAGAAAAGTAAAGTTGATATCATTGTTGCACTACGAGCAAATCCAGACGATTCGAAAACTCGGCATCCTGATGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAACGGTAATCTCGCCGGACCCAATCCCGACGGAAAACCAAATGTGAAACCAGAAAGCTCTAGAAAACCGAAGAAGAAGTCGATTCCTATGCTTGCTATCCTTGCCGGTGTAGTTTCGGTCTTACTTGTTCTTTCCCTAGTCGGGTTTTTAGTTTTCAGGCGTGGAAGAAAACTCAAGGACTCCAGCTCCAGCCACAGGATGACGAGGCCAGCCATGAGCACTGGGTCACTTTTACCATCTTATTTGTGTCGTTACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAATACTTCGATGATACTTTCATCATTGGAGCTGGGGGATTTGGCAACGTATACAAAGGATTCATCGATGGTGGAGGCACTCCAGTTGCAATCAAACGGCTGAAAGCCATGTCATCACAAGGGTCCCGCGAGTTTAGGACGGAAATTGAGATGCTCTCTCGACTCCGCCACCGCCATTTGGTGTCTCTTATCGGATTTTGTGCCGATGAAGGTGAGATGATTTTGGTGTATGATTACATGGCACGTGGGACTCTTCGTGACCATCTCTACCACCCTGATAATCCACCTCTTCCATGGGAACATCGGCTTCAAATTTGTATTGGCGCGGCGCAAGGTTTGCACCATCTTCACACAGGTACCAAGGGCACCATCATTCACCGTGACGTAAAGAGCACAAACATATTATTGGATGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCGAGAAAGGGCACAATCACAGTGTCCAAGACCCACATAAGCACGAAGGTGAAGGGTAGTTTTGGATATCTTGACCCGGATTACTATCGACGTCAACAATTAACTGAGAAGTCTGATGTGTACTCCTTTGGTGTAGTGTTGTGCGAGGTATTGTGTGGAAGGCCAGCTATAACAACCGTAGAGAATAATCGAGTTGGCTTAGCTGGATGGGCCAAGAAGTGTCATCGTAATGGGAAACTTGATCAAATTATTGACCCAAAGTTAAACGGTAAGATTGCGGCACGATGCTTGCACAAATTTGTTACCATGGCGATGAGTTGCATAGATGATAATGGAATCAATCGTCCTTCGATGAATGATGTGGTGAGAGGGCTTCAATTTGCATTGCAGTTGCAACAGAACAATGAGGATTATATTGATGACGTTGACAGGACGCATGAAGATGAGATTGTTTCGATCAAGGACAATGAAGGGTCCAGTGAACAAGATTGTGGGGTGAACGAATCCGTGCAAGGGTTGACTGGGACAATCTTCTCTGAGATCATCGATCCGATTGGTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

850

Amino Acids

94.54

Weight (kDa)

7.25

Isoelectric Point (pI)

37.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	36 - 415	2.4e-30	Malectin-like domain
Malectin	PF11721	229 - 372	9e-11	Malectin domain
Pkinase	PF00069	522 - 785	1.7e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	523 - 786	1.4e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	67
AatII	GACGTC	1 cut(s)	2083
Acc65I	GGTACC	1 cut(s)	1898
AccB1I	GGYRCC	3 cut(s)	638, 1898, 1907
AccBSI	CCGCTC	1 cut(s)	372
AccI	GTMKAC	1 cut(s)	1593
AccII	CGCG	3 cut(s)	767, 1671, 1868
AclWI	GGATC	2 cut(s)	944, 2531
AcoI	YGGCCR	2 cut(s)	313, 883
AcsI	RAATTY	5 cut(s)	284, 482, 833, 1854, 2285
AcvI	CACGTG	1 cut(s)	1787
AcyI	GRCGYC	1 cut(s)	2080
AfaI	GTAC	5 cut(s)	252, 257, 743, 1900, 2111
AfiI	CCNNNNNNNGG	9 cut(s)	267, 648, 751, 892, 1048, 1398, 1452, 1720, 2502
AgsI	TTSAA	7 cut(s)	433, 572, 759, 1225, 1243, 1853, 2366
AjnI	CCWGG	4 cut(s)	343, 932, 966, 1140
AjuI	GAANNNNNNNTTGG	2 cut(s)	368, 400
AleI	CACNNNNGTG	1 cut(s)	2036
AluBI	AGCT	8 cut(s)	36, 178, 921, 1314, 1443, 1574, 2156, 2192
AluI	AGCT	8 cut(s)	36, 178, 921, 1314, 1443, 1574, 2156, 2192
Alw21I	GWGCWC	2 cut(s)	1478, 1937
Alw26I	GTCTC	3 cut(s)	721, 1101, 1731
AlwI	GGATC	2 cut(s)	944, 2531
AlwNI	CAGNNNCTG	1 cut(s)	517
AoxI	GGCC	7 cut(s)	313, 623, 883, 895, 1463, 2150, 2199
ApeKI	GCWGC	1 cut(s)	243
ApoI	RAATTY	5 cut(s)	284, 482, 833, 1854, 2285
ArsI	GACNNNNNNTTYG	2 cut(s)	1319, 1351
Asp718I	GGTACC	1 cut(s)	1898
AspLEI	GCGC	3 cut(s)	862, 1868, 1873
AspS9I	GGNCC	6 cut(s)	623, 895, 1274, 1665, 2199, 2463
AsuC2I	CCSGG	2 cut(s)	312, 2066
AsuII	TTCGAA	1 cut(s)	1196
AvaII	GGWCC	3 cut(s)	1274, 1665, 2463
BaeGI	GKGCMC	3 cut(s)	1128, 1910, 2003
BaeI	ACNNNNGTAYC	2 cut(s)	1882, 1915
BanI	GGYRCC	3 cut(s)	638, 1898, 1907
BanII	GRGCYC	1 cut(s)	1233
BbrPI	CACGTG	1 cut(s)	1787
BbsI	GAAGAC	1 cut(s)	1124
Bbv12I	GWGCWC	2 cut(s)	1478, 1937
BbvI	GCAGC	1 cut(s)	255
BceAI	ACGGC	2 cut(s)	284, 1655
BcgI	CGANNNNNNTGC	4 cut(s)	210, 244, 1327, 1361
BciT130I	CCWGG	4 cut(s)	345, 934, 968, 1142
BclI	TGATCA	1 cut(s)	2230
BcnI	CCSGG	2 cut(s)	312, 2066
BcoDI	GTCTC	3 cut(s)	721, 1101, 1731
BfaI	CTAG	4 cut(s)	627, 713, 1317, 1394
BfmI	CTRYAG	2 cut(s)	186, 945
BisI	GCNGC	6 cut(s)	244, 609, 883, 1536, 1869, 2268
BlpI	GCTNAGC	1 cut(s)	2188
BlsI	GCNGC	6 cut(s)	245, 610, 884, 1537, 1870, 2269
Bme1390I	CCNGG	6 cut(s)	312, 345, 934, 968, 1142, 2066
Bme18I	GGWCC	3 cut(s)	1274, 1665, 2463
BmgT120I	GGNCC	6 cut(s)	623, 895, 1274, 1665, 2199, 2463
BmrFI	CCNGG	6 cut(s)	312, 345, 934, 968, 1142, 2066
BmrI	ACTGGG	5 cut(s)	650, 760, 1122, 1488, 2520
BmsI	GCATC	7 cut(s)	212, 462, 504, 1204, 1216, 1683, 2264
BmuI	ACTGGG	5 cut(s)	650, 760, 1122, 1488, 2520
BpiI	GAAGAC	1 cut(s)	1124
BplI	GAGNNNNNCTC	2 cut(s)	1682, 1714
BpmI	CTGGAG	3 cut(s)	1423, 1429, 1608
Bpu1102I	GCTNAGC	1 cut(s)	2188
Bpu14I	TTCGAA	1 cut(s)	1196
BpuEI	CTTGAG	1 cut(s)	1415
BpuMI	CCSGG	2 cut(s)	312, 2066
Bsa29I	ATCGAT	2 cut(s)	1608, 2535
BsaAI	YACGTR	1 cut(s)	1787
BsaBI	GATNNNNATC	1 cut(s)	2073
BsaHI	GRCGYC	1 cut(s)	2080
BsaJI	CCNNGG	8 cut(s)	237, 343, 613, 933, 1835, 1902, 1968, 2295
BsaWI	WCCGGW	2 cut(s)	62, 648
BsaXI	ACNNNNNCTCC	4 cut(s)	517, 547, 1427, 1457
Bsc4I	CCNNNNNNNGG	9 cut(s)	267, 648, 751, 892, 1048, 1398, 1452, 1720, 2502
Bse118I	RCCGGY	4 cut(s)	398, 862, 885, 1361
Bse1I	ACTGG	9 cut(s)	60, 656, 755, 1128, 1483, 1524, 1625, 2466, 2515
Bse3DI	GCAATG	1 cut(s)	2372
Bse8I	GATNNNNATC	1 cut(s)	2073
BseBI	CCWGG	4 cut(s)	345, 934, 968, 1142
BseCI	ATCGAT	2 cut(s)	1608, 2535
BseDI	CCNNGG	8 cut(s)	237, 343, 613, 933, 1835, 1902, 1968, 2295
BseGI	GGATG	6 cut(s)	119, 203, 1207, 1461, 1957, 2201
BseJI	GATNNNNATC	1 cut(s)	2073
BseLI	CCNNNNNNNGG	9 cut(s)	267, 648, 751, 892, 1048, 1398, 1452, 1720, 2502
BseMI	GCAATG	1 cut(s)	2372
BseMII	CTCAG	2 cut(s)	2085, 2517
BseNI	ACTGG	9 cut(s)	60, 656, 755, 1128, 1483, 1524, 1625, 2466, 2515
BseRI	GAGGAG	1 cut(s)	9
BseSI	GKGCMC	3 cut(s)	1128, 1910, 2003
BseX3I	CGGCCG	1 cut(s)	883
BseXI	GCAGC	1 cut(s)	255
BseYI	CCCAGC	2 cut(s)	536, 1574
BsgI	GTGCAG	1 cut(s)	468
Bsh1236I	CGCG	3 cut(s)	767, 1671, 1868
Bsh1285I	CGRYCG	2 cut(s)	370, 886
BshFI	GGCC	7 cut(s)	315, 625, 885, 897, 1465, 2152, 2201
BshNI	GGYRCC	3 cut(s)	638, 1898, 1907
BshVI	ATCGAT	2 cut(s)	1608, 2535
BsiEI	CGRYCG	2 cut(s)	370, 886
BsiHKAI	GWGCWC	2 cut(s)	1478, 1937
BslFI	GGGAC	5 cut(s)	294, 364, 1651, 1804, 2527
BslI	CCNNNNNNNGG	9 cut(s)	267, 648, 751, 892, 1048, 1398, 1452, 1720, 2502
BsmAI	GTCTC	3 cut(s)	721, 1101, 1731
BsmFI	GGGAC	5 cut(s)	294, 364, 1651, 1804, 2527
BsnI	GGCC	7 cut(s)	315, 625, 885, 897, 1465, 2152, 2201
Bsp119I	TTCGAA	1 cut(s)	1196
Bsp1286I	GDGCHC	6 cut(s)	1128, 1233, 1478, 1910, 1937, 2003
Bsp143I	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
Bsp1720I	GCTNAGC	1 cut(s)	2188
Bsp19I	CCATGG	2 cut(s)	1835, 2295
BspANI	GGCC	7 cut(s)	315, 625, 885, 897, 1465, 2152, 2201
BspCNI	CTCAG	2 cut(s)	2086, 2518
BspDI	ATCGAT	2 cut(s)	1608, 2535
BspFNI	CGCG	3 cut(s)	767, 1671, 1868
BspPI	GGATC	2 cut(s)	944, 2531
BspT104I	TTCGAA	1 cut(s)	1196
BspT107I	GGYRCC	3 cut(s)	638, 1898, 1907
BsrBI	CCGCTC	1 cut(s)	372
BsrDI	GCAATG	1 cut(s)	2372
BsrFI	RCCGGY	4 cut(s)	398, 862, 885, 1361
BsrI	ACTGG	9 cut(s)	60, 656, 755, 1128, 1483, 1524, 1625, 2466, 2515
BssAI	RCCGGY	4 cut(s)	398, 862, 885, 1361
BssECI	CCNNGG	8 cut(s)	237, 343, 613, 933, 1835, 1902, 1968, 2295
BssMI	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
BssNAI	GTATAC	1 cut(s)	1594
BssNI	GRCGYC	1 cut(s)	2080
BssT1I	CCWWGG	5 cut(s)	613, 1835, 1902, 1968, 2295
Bst1107I	GTATAC	1 cut(s)	1594
Bst2UI	CCWGG	4 cut(s)	345, 934, 968, 1142
Bst6I	CTCTTC	4 cut(s)	47, 389, 1800, 1836
BstACI	GRCGYC	1 cut(s)	2080
BstAPI	GCANNNNNTGC	1 cut(s)	1879
BstBAI	YACGTR	1 cut(s)	1787
BstBI	TTCGAA	1 cut(s)	1196
BstC8I	GCNNGC	5 cut(s)	588, 1350, 1467, 2154, 2279
BstDEI	CTNAG	3 cut(s)	2094, 2188, 2526
BstDSI	CCRYGG	3 cut(s)	237, 1835, 2295
BstEII	GGTNACC	1 cut(s)	58
BstF5I	GGATG	6 cut(s)	119, 203, 1207, 1461, 1957, 2201
BstFNI	CGCG	3 cut(s)	767, 1671, 1868
BstHHI	GCGC	3 cut(s)	862, 1868, 1873
BstKTI	GATC	9 cut(s)	687, 771, 952, 1015, 1530, 2233, 2448, 2532, 2539
BstMAI	GTCTC	3 cut(s)	721, 1101, 1731
BstMBI	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
BstMCI	CGRYCG	2 cut(s)	370, 886
BstMWI	GCNNNNNNNGC	6 cut(s)	123, 744, 1178, 1358, 1879, 2198
BstNI	CCWGG	4 cut(s)	345, 934, 968, 1142
BstNSI	RCATGY	2 cut(s)	742, 805
BstPI	GGTNACC	1 cut(s)	58
BstSCI	CCNGG	6 cut(s)	310, 343, 932, 966, 1140, 2064
BstSFI	CTRYAG	2 cut(s)	186, 945
BstSLI	GKGCMC	3 cut(s)	1128, 1910, 2003
BstUI	CGCG	3 cut(s)	767, 1671, 1868
BstV1I	GCAGC	1 cut(s)	255
BstV2I	GAAGAC	1 cut(s)	1124
BstX2I	RGATCY	1 cut(s)	949
BstXI	CCANNNNNNTGG	2 cut(s)	620, 1079
BstYI	RGATCY	1 cut(s)	949
BstZ17I	GTATAC	1 cut(s)	1594
BstZI	CGGCCG	1 cut(s)	883
Bsu15I	ATCGAT	2 cut(s)	1608, 2535
BsuRI	GGCC	7 cut(s)	315, 625, 885, 897, 1465, 2152, 2201
BsuTUI	ATCGAT	2 cut(s)	1608, 2535
BtgI	CCRYGG	3 cut(s)	237, 1835, 2295
BtgZI	GCGATG	2 cut(s)	633, 2315
BtsCI	GGATG	6 cut(s)	119, 203, 1207, 1461, 1957, 2201
BtsI	GCAGTG	2 cut(s)	603, 855
BtsIMutI	CAGTG	8 cut(s)	451, 603, 663, 855, 1476, 1517, 2016, 2473
Cac8I	GCNNGC	5 cut(s)	588, 1350, 1467, 2154, 2279
CaiI	CAGNNNCTG	1 cut(s)	517
CfoI	GCGC	3 cut(s)	862, 1868, 1873
Cfr10I	RCCGGY	4 cut(s)	398, 862, 885, 1361
Cfr13I	GGNCC	6 cut(s)	623, 895, 1274, 1665, 2199, 2463
ClaI	ATCGAT	2 cut(s)	1608, 2535
CseI	GACGC	2 cut(s)	773, 2431
CsiI	ACCWGGT	1 cut(s)	966
Csp6I	GTAC	5 cut(s)	251, 256, 742, 1899, 2110
CspCI	CAANNNNNGTGG	2 cut(s)	382, 417
CviAII	CATG	9 cut(s)	583, 739, 802, 1471, 1651, 1780, 1836, 2296, 2426
CviQI	GTAC	5 cut(s)	251, 256, 742, 1899, 2110
DdeI	CTNAG	3 cut(s)	2094, 2188, 2526
DpnI	GATC	9 cut(s)	686, 770, 951, 1014, 1529, 2232, 2447, 2531, 2538
DpnII	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
DraI	TTTAAA	1 cut(s)	216
DrdI	GACNNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	1 cut(s)	67
EaeI	YGGCCR	2 cut(s)	313, 883
EagI	CGGCCG	1 cut(s)	883
Eam1104I	CTCTTC	4 cut(s)	47, 389, 1800, 1836
EarI	CTCTTC	4 cut(s)	47, 389, 1800, 1836
EciI	GGCGGA	2 cut(s)	720, 1697
EclXI	CGGCCG	1 cut(s)	883
Eco130I	CCWWGG	5 cut(s)	613, 1835, 1902, 1968, 2295
Eco24I	GRGCYC	1 cut(s)	1233
Eco32I	GATATC	3 cut(s)	166, 1162, 2057
Eco47I	GGWCC	3 cut(s)	1274, 1665, 2463
Eco52I	CGGCCG	1 cut(s)	883
Eco72I	CACGTG	1 cut(s)	1787
Eco91I	GGTNACC	1 cut(s)	58
EcoO109I	RGGNCCY	1 cut(s)	1665
EcoO65I	GGTNACC	1 cut(s)	58
EcoRI	GAATTC	2 cut(s)	284, 482
EcoRII	CCWGG	4 cut(s)	343, 932, 966, 1140
EcoRV	GATATC	3 cut(s)	166, 1162, 2057
EcoT14I	CCWWGG	5 cut(s)	613, 1835, 1902, 1968, 2295
EcoT38I	GRGCYC	1 cut(s)	1233
ErhI	CCWWGG	5 cut(s)	613, 1835, 1902, 1968, 2295
FaeI	CATG	9 cut(s)	586, 742, 805, 1474, 1654, 1783, 1839, 2299, 2429
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	5 cut(s)	294, 364, 1651, 1804, 2527
FatI	CATG	9 cut(s)	582, 738, 801, 1470, 1650, 1779, 1835, 2295, 2425
FauI	CCCGC	1 cut(s)	1676
FbaI	TGATCA	1 cut(s)	2230
FblI	GTMKAC	1 cut(s)	1593
Fnu4HI	GCNGC	6 cut(s)	244, 609, 883, 1536, 1869, 2268
FokI	GGATG	6 cut(s)	106, 190, 1194, 1468, 1964, 2208
FriOI	GRGCYC	1 cut(s)	1233
Fsp4HI	GCNGC	6 cut(s)	244, 609, 883, 1536, 1869, 2268
FspBI	CTAG	4 cut(s)	627, 713, 1317, 1394
GlaI	GCGC	3 cut(s)	861, 1867, 1872
GluI	GCNGC	6 cut(s)	244, 609, 883, 1536, 1869, 2268
GsaI	CCCAGC	2 cut(s)	540, 1578
GsuI	CTGGAG	3 cut(s)	1423, 1429, 1608
HaeIII	GGCC	7 cut(s)	315, 625, 885, 897, 1465, 2152, 2201
HgaI	GACGC	2 cut(s)	773, 2431
HhaI	GCGC	3 cut(s)	862, 1868, 1873
Hin1I	GRCGYC	1 cut(s)	2080
Hin1II	CATG	9 cut(s)	586, 742, 805, 1474, 1654, 1783, 1839, 2299, 2429
Hin6I	GCGC	3 cut(s)	860, 1866, 1871
HinP1I	GCGC	3 cut(s)	860, 1866, 1871
HincII	GTYRAC	4 cut(s)	136, 2084, 2416, 2508
HindII	GTYRAC	4 cut(s)	136, 2084, 2416, 2508
HindIII	AAGCTT	1 cut(s)	176
Hpy188I	TCNGA	8 cut(s)	283, 468, 1026, 1736, 1978, 2104, 2527, 2541
Hpy99I	CGWCG	4 cut(s)	232, 704, 1289, 2082
HpyAV	CCTTC	7 cut(s)	428, 1745, 2029, 2035, 2142, 2346, 2453
HpyCH4IV	ACGT	6 cut(s)	699, 1590, 1786, 1926, 2080, 2412
HpyF10VI	GCNNNNNNNGC	6 cut(s)	123, 744, 1178, 1358, 1879, 2198
HpyF3I	CTNAG	3 cut(s)	2094, 2188, 2526
HpySE526I	ACGT	6 cut(s)	699, 1590, 1786, 1926, 2080, 2412
Hsp92I	GRCGYC	1 cut(s)	2080
Hsp92II	CATG	9 cut(s)	586, 742, 805, 1474, 1654, 1783, 1839, 2299, 2429
HspAI	GCGC	3 cut(s)	860, 1866, 1871
KflI	GGGWCCC	1 cut(s)	1665
KpnI	GGTACC	1 cut(s)	1902
Ksp22I	TGATCA	1 cut(s)	2230
Kzo9I	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
LmnI	GCTCC	6 cut(s)	22, 377, 981, 1006, 1448, 1571
Lsp1109I	GCAGC	1 cut(s)	255
LweI	GCATC	7 cut(s)	212, 462, 504, 1204, 1216, 1683, 2264
MabI	ACCWGGT	1 cut(s)	966
MaeI	CTAG	4 cut(s)	627, 713, 1317, 1394
MaeII	ACGT	6 cut(s)	699, 1590, 1786, 1926, 2080, 2412
MaeIII	GTNAC	8 cut(s)	46, 58, 782, 1482, 1508, 1799, 1922, 2290
MalI	GATC	9 cut(s)	686, 770, 951, 1014, 1529, 2232, 2447, 2531, 2538
MbiI	CCGCTC	1 cut(s)	372
MboI	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
MflI	RGATCY	1 cut(s)	949
MhlI	GDGCHC	6 cut(s)	1128, 1233, 1478, 1910, 1937, 2003
MlyI	GAGTC	4 cut(s)	77, 1430, 1698, 1786
MmeI	TCCRAC	2 cut(s)	113, 984
MseI	TTAA	6 cut(s)	215, 477, 492, 776, 2090, 2252
MslI	CAYNNNNRTG	7 cut(s)	674, 984, 1212, 2036, 2217, 2300, 2430
MspA1I	CMGCKG	1 cut(s)	1049
MspR9I	CCNGG	6 cut(s)	312, 345, 934, 968, 1142, 2066
MteI	GCGCNGCGC	1 cut(s)	1869
MvaI	CCWGG	4 cut(s)	345, 934, 968, 1142
MvnI	CGCG	3 cut(s)	767, 1671, 1868
MwoI	GCNNNNNNNGC	6 cut(s)	123, 744, 1178, 1358, 1879, 2198
NciI	CCSGG	2 cut(s)	312, 2066
NcoI	CCATGG	2 cut(s)	1835, 2295
NdeII	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
NlaIII	CATG	9 cut(s)	586, 742, 805, 1474, 1654, 1783, 1839, 2299, 2429
NmeAIII	GCCGAG	1 cut(s)	1183
NmuCI	GTSAC	6 cut(s)	46, 58, 782, 1482, 1799, 1922
NspI	RCATGY	2 cut(s)	742, 805
NspV	TTCGAA	1 cut(s)	1196
OliI	CACNNNNGTG	1 cut(s)	2036
PcsI	WCGNNNNNNNCGW	1 cut(s)	363
PfeI	GAWTC	9 cut(s)	143, 693, 755, 1093, 1193, 1339, 1602, 2325, 2492
PkrI	GCNGC	6 cut(s)	245, 610, 884, 1537, 1870, 2269
PleI	GAGTC	4 cut(s)	76, 1430, 1698, 1786
PmaCI	CACGTG	1 cut(s)	1787
PmlI	CACGTG	1 cut(s)	1787
PpsI	GAGTC	4 cut(s)	76, 1430, 1698, 1786
Ppu21I	YACGTR	1 cut(s)	1787
PpuMI	RGGWCCY	1 cut(s)	1665
Psp5II	RGGWCCY	1 cut(s)	1665
Psp6I	CCWGG	4 cut(s)	343, 932, 966, 1140
PspCI	CACGTG	1 cut(s)	1787
PspEI	GGTNACC	1 cut(s)	58
PspFI	CCCAGC	2 cut(s)	536, 1574
PspGI	CCWGG	4 cut(s)	343, 932, 966, 1140
PspPI	GGNCC	6 cut(s)	623, 895, 1274, 1665, 2199, 2463
PspPPI	RGGWCCY	1 cut(s)	1665
PstNI	CAGNNNCTG	1 cut(s)	517
PsuI	RGATCY	1 cut(s)	949
RsaI	GTAC	5 cut(s)	252, 257, 743, 1900, 2111
RsaNI	GTAC	5 cut(s)	251, 256, 742, 1899, 2110
RseI	CAYNNNNRTG	7 cut(s)	674, 984, 1212, 2036, 2217, 2300, 2430
SaqAI	TTAA	6 cut(s)	215, 477, 492, 776, 2090, 2252
SatI	GCNGC	6 cut(s)	244, 609, 883, 1536, 1869, 2268
Sau3AI	GATC	9 cut(s)	684, 768, 949, 1012, 1527, 2230, 2445, 2529, 2536
Sau96I	GGNCC	6 cut(s)	623, 895, 1274, 1665, 2199, 2463
SchI	GAGTC	4 cut(s)	77, 1430, 1698, 1786
ScrFI	CCNGG	6 cut(s)	312, 345, 934, 968, 1142, 2066
SduI	GDGCHC	6 cut(s)	1128, 1233, 1478, 1910, 1937, 2003
SexAI	ACCWGGT	1 cut(s)	966
SfaNI	GCATC	7 cut(s)	212, 462, 504, 1204, 1216, 1683, 2264
SfcI	CTRYAG	2 cut(s)	186, 945
SfuI	TTCGAA	1 cut(s)	1196
SinI	GGWCC	3 cut(s)	1274, 1665, 2463
SmiMI	CAYNNNNRTG	7 cut(s)	674, 984, 1212, 2036, 2217, 2300, 2430
SmlI	CTYRAG	1 cut(s)	1430
SmoI	CTYRAG	1 cut(s)	1430
SspMI	CTAG	4 cut(s)	627, 713, 1317, 1394
StyD4I	CCNGG	6 cut(s)	310, 343, 932, 966, 1140, 2064
StyI	CCWWGG	5 cut(s)	613, 1835, 1902, 1968, 2295
TaiI	ACGT	6 cut(s)	702, 1593, 1789, 1929, 2083, 2415
TaqII	GACCGA	1 cut(s)	1363
TatI	WGTACW	1 cut(s)	2109
TauI	GCSGC	5 cut(s)	611, 885, 1538, 1871, 2270
TfiI	GAWTC	9 cut(s)	143, 693, 755, 1093, 1193, 1339, 1602, 2325, 2492
Tru1I	TTAA	6 cut(s)	215, 477, 492, 776, 2090, 2252
Tru9I	TTAA	6 cut(s)	215, 477, 492, 776, 2090, 2252
TscAI	CASTG	8 cut(s)	451, 610, 663, 862, 1483, 1524, 2016, 2473
TseFI	GTSAC	6 cut(s)	46, 58, 782, 1482, 1799, 1922
TseI	GCWGC	1 cut(s)	243
Tsp45I	GTSAC	6 cut(s)	46, 58, 782, 1482, 1799, 1922
TspDTI	ATGAA	9 cut(s)	17, 313, 741, 1552, 1594, 1764, 2357, 2442, 2472
TspGWI	ACGGA	4 cut(s)	918, 1302, 1697, 2485
TspRI	CASTG	8 cut(s)	451, 610, 663, 862, 1483, 1524, 2016, 2473
VpaK11BI	GGWCC	3 cut(s)	1274, 1665, 2463
XapI	RAATTY	5 cut(s)	284, 482, 833, 1854, 2285
XbaI	TCTAGA	1 cut(s)	1316
XceI	RCATGY	2 cut(s)	742, 805
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1833
XmiI	GTMKAC	1 cut(s)	1593
XspI	CTAG	4 cut(s)	627, 713, 1317, 1394
ZraI	GACGTC	1 cut(s)	2081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.