Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

80327043 .. 80329827

Gene Structure 2785 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53326

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2679 bp

ATGAAACCTATTTTCATTCCTCTTAACCTTTCCAGCTTGTTTTTACTCATCGTCACCCTGCTGGTGGCCGGAGAGTCCGCACCTATCTACTCTCCAACCTATAATATCACCCTTAACTGTGGCTTTTCCGGCGACAAGGTCAGTGCTTACGATTTTCAAACTTGGACGGGTGACATCAACTCAAAGTTTTTCCCCGAAGCAGTTGGTGGCACATCCCAAGTCGGAAATGCACCACCGTCGTCCTCCTTAGGCAGCTATGTACCATTCACCACAGCTCGGCTTTCGCATTCGGAATTCACTTACAGATTTCCCGTAAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCCCAGCTACATACAACGCGGACTTCGACAGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACACACTTCTCAAGGACTTCAACGCTTCTCTCGGTAGAATTTACTATAACTCTGAGACACTACTTACAGAATTCTGCCTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACATTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTCGGCAGCCCAAGGAGATGGGGCTAGTTATCTTGGCAGCAGCGATAGCAGATATCTTGTTAAAAACAACACCGCTCTGCAGATGATCTACCGAATCAACGTTGGTGGCAACCCAGTATCTCCGAATGAAGACACCGGCATGTACCGCACCTGGGACCCACCCGACGAGTTCTTCTTAGATGATCGAAGTAAAAATTTGAGCATTTCACGAAGATATAATACCCATCTCAATTTTGCAAGAATCTTTAACTACACTGCGCCCGAAGAGGTGTACCGAACGGGCCGGACAATGGGAGGGAACAGCACCATCAACAAGAGCTACAATCTCACCTGGAGATTCCCTGTAGATCCCGACTTTTCTTACCTGGTGAGGCTCCATTTCTGTGAGATTGATCCGAATATTACCGCGGCTAAAGATAGAATGTTTCAGATTTTCATAGCTAATTTTACAGCTGAACCGCAAGCAGACATAATCCACTGGACTACAGAAAATGGAATCGGAAATGGGATTCCCATATATAGGGACTACTTTGTGCCGATGCTGAATCTTGGAACCCAGAAGAAAGGTTCCGTTAATATCTCTGTTGCACTACAAGCATATCAAGACGATTACCTAACTCGATATAACGATGCGATATTGAATGGGCTGGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGACCCATCCCCGAGCTACCGAATATCACGCCAAAGGTGGCGTCGGAAAGCTCTAGAAACTCGAAGAAGAAGTCGATTCCTATGCTTGCTATTCTCGCCGGTGTAGTTTCGGTCTTACTTGTTGTTTCCGTCGTCGGGTTTTTACTTTTCAGGCGTGGAAGAAAAGTCAAGGACTCCAACTCCAGCAAAGCAACAAAGTGGGGGCCATATTCTTTTTCGACGACCAAGTCAACCAAGTCTCGCGGCTCATCTCTACCGTCGGACCTGTGTCGTCACTTTTCACTGGCTGAGATCAAAGCCGCCACCCAAAACTTCAACGATGTTTTCATCATCGGGGTTGGTGGGTTTGGCAACGTGTACAAAGGGTATGTGGATGATGGGTCCACACCGGTGGCGATCAAACGGCTGAAACCCGAGTCATCACAGGGCGCCCGCGAGTTCAAGACCGAGATAGAGATGCTCTCCCAACTCCGCCACCTCCATTTGGTGTCTCTCGTTGGATATTGCACTGAGCAAGGTGAGATGATCTTGGTGTATGACTACATGGCACGTGGGACCCTCCGAGACCATTTGTACAGAACTGAAAATCCACCACTTCCGTGGGAACAACGGCTCCAAATTTGTATTGGTGCGGCGCGTGGGTTGCACTACCTTCACACGGGGGCCAAGCGCATGATTATCCACCGCGACGTGAAGAGCACAAATATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCGGACTTTGGGTTGTCCAAAATGGGCACCACCACTTTGTCCAAGACTCACATCAGTACAGTGGTGAAGGGTAGTTTTGGTTATCTTGACCCGGAGTACTATAGACGTCAGCAGTTGACTGAAAAATCGGACGTTTACTCTTTTGGAGTAGTCTTGTGTGAGGTTTTGTGTGCAAGGCCAGCTCTGATACGCACGGCGGAGAAGAAGCAAATGAGCCTAGCTGAATGGACCAAGACTAGTCATCGAAATGGCACGATTAATCAAATCATTGATCCAAATCTAAGGGGAAAGATTGCAGCCACATGTCTGAATAAGTTTGTTGAGCTTGCGTTGAGTTGTATGAATGATAATGGAAGTGAGCGGCCATCGATGAATGACGTAGTATGGGGGCTTGAGTTTGCACTGCAGCTTCAGCAGAGTGCGGAAGCAATGTTATACTCCAACGTCGAAAAGGAAGGTGAAGATGAGGTTGCATTAATGAAAGGTAATGATGCTGGGATGAGTTGTAGCTGGGAATACTCGTCGGATTCGAAGAACAGCAGAACGACCAAAACTAGTAGCGATGAGCAAATTTCTACCACCAATGAATCCATGAAAGGCATGTCTGGAACAATCTTCTCTGAGATCAAGGATCCCACTGTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

892

Amino Acids

99.47

Weight (kDa)

8.07

Isoelectric Point (pI)

37.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	39 - 422	1.3e-27	Malectin-like domain
Pkinase	PF00069	540 - 804	1.4e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	542 - 805	1.3e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1519
AatII	GACGTC	1 cut(s)	2140
AccB1I	GGYRCC	2 cut(s)	1721, 2057
AccBSI	CCGCTC	2 cut(s)	680, 2392
AccII	CGCG	6 cut(s)	368, 1013, 1536, 1728, 1930, 1980
AclI	AACGTT	1 cut(s)	705
AclWI	GGATC	6 cut(s)	578, 947, 992, 2297, 2657, 2670
AcoI	YGGCCR	3 cut(s)	66, 2022, 2393
AcsI	RAATTY	6 cut(s)	293, 453, 485, 799, 1911, 2601
AcuI	CTGAAG	1 cut(s)	2426
AcvI	CACGTG	1 cut(s)	1844
AcyI	GRCGYC	3 cut(s)	1334, 1722, 2137
AfaI	GTAC	7 cut(s)	261, 749, 878, 1652, 1868, 2089, 2129
AfiI	CCNNNNNNNGG	9 cut(s)	64, 276, 545, 757, 895, 1125, 1428, 1777, 1951
AflIII	ACRYGT	2 cut(s)	1647, 2333
AgeI	ACCGGT	1 cut(s)	1681
AgsI	TTSAA	6 cut(s)	158, 436, 1246, 1264, 1609, 1735
AhlI	ACTAGT	2 cut(s)	2267, 2585
AjiI	CACGTC	1 cut(s)	1984
AjnI	CCWGG	5 cut(s)	319, 543, 755, 935, 969
AleI	CACNNNNGTG	2 cut(s)	1682, 1891
AloI	GAACNNNNNNTCC	4 cut(s)	1864, 1890, 1896, 1922
Alw21I	GWGCWC	1 cut(s)	1994
Alw26I	GTCTC	4 cut(s)	464, 1536, 1788, 1851
AlwI	GGATC	6 cut(s)	578, 947, 992, 2297, 2657, 2670
Ama87I	CYCGRG	2 cut(s)	1304, 1706
AoxI	GGCC	8 cut(s)	66, 322, 886, 1496, 1956, 2022, 2207, 2393
ApeKI	GCWGC	6 cut(s)	252, 611, 642, 645, 2327, 2437
ApoI	RAATTY	6 cut(s)	293, 453, 485, 799, 1911, 2601
ArsI	GACNNNNNNTTYG	4 cut(s)	1319, 1349, 1351, 1381
AseI	ATTAAT	2 cut(s)	2289, 2507
AsiGI	ACCGGT	1 cut(s)	1681
AspLEI	GCGC	4 cut(s)	865, 1724, 1930, 1965
AspS9I	GGNCC	9 cut(s)	760, 886, 1295, 1496, 1555, 1674, 1848, 1956, 2259
AsuC2I	CCSGG	1 cut(s)	2123
AsuHPI	GGTGA	9 cut(s)	46, 100, 182, 259, 925, 985, 1823, 2107, 2501
AsuII	TTCGAA	1 cut(s)	2561
AvaI	CYCGRG	2 cut(s)	1304, 1706
AvaII	GGWCC	6 cut(s)	760, 1295, 1555, 1674, 1848, 2259
AxyI	CCTNAGG	1 cut(s)	247
BaeGI	GKGCMC	1 cut(s)	2060
BalI	TGGCCA	1 cut(s)	2024
BamHI	GGATCC	1 cut(s)	2662
BanI	GGYRCC	2 cut(s)	1721, 2057
BarI	GAAGNNNNNNTAC	2 cut(s)	808, 840
BbrPI	CACGTG	1 cut(s)	1844
BbsI	GAAGAC	1 cut(s)	741
Bbv12I	GWGCWC	1 cut(s)	1994
BbvI	GCAGC	6 cut(s)	264, 623, 654, 657, 2339, 2449
BccI	CCATC	6 cut(s)	617, 837, 920, 1307, 1664, 2404
BceAI	ACGGC	4 cut(s)	1297, 1712, 1919, 2241
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1357, 1391
BciT130I	CCWGG	5 cut(s)	321, 545, 757, 937, 971
BciVI	GTATCC	1 cut(s)	545
BcnI	CCSGG	1 cut(s)	2123
BcoDI	GTCTC	4 cut(s)	464, 1536, 1788, 1851
BcuI	ACTAGT	2 cut(s)	2267, 2585
BfaI	CTAG	5 cut(s)	630, 1347, 2249, 2268, 2586
BfmI	CTRYAG	5 cut(s)	683, 948, 1089, 2131, 2435
BfoI	RGCGCY	1 cut(s)	1725
BfuI	GTATCC	1 cut(s)	545
BmcAI	AGTACT	1 cut(s)	2129
Bme1390I	CCNGG	6 cut(s)	321, 545, 757, 937, 971, 2123
Bme18I	GGWCC	6 cut(s)	760, 1295, 1555, 1674, 1848, 2259
BmeT110I	CYCGRG	2 cut(s)	1304, 1706
BmgBI	CACGTC	1 cut(s)	1984
BmgT120I	GGNCC	9 cut(s)	760, 886, 1295, 1496, 1555, 1674, 1848, 1956, 2259
BmrFI	CCNGG	6 cut(s)	321, 545, 757, 937, 971, 2123
BmrI	ACTGGG	1 cut(s)	713
BmsI	GCATC	4 cut(s)	1134, 1225, 1740, 2512
BmuI	ACTGGG	1 cut(s)	713
BoxI	GACNNNNGTC	1 cut(s)	1560
BpiI	GAAGAC	1 cut(s)	741
BplI	GAGNNNNNCTC	2 cut(s)	1739, 1771
BpmI	CTGGAG	2 cut(s)	958, 1459
Bpu14I	TTCGAA	1 cut(s)	2561
BpuEI	CTTGAG	2 cut(s)	410, 2444
BpuMI	CCSGG	1 cut(s)	2123
Bsa29I	ATCGAT	1 cut(s)	2399
BsaAI	YACGTR	1 cut(s)	1844
BsaBI	GATNNNNATC	2 cut(s)	575, 2307
BsaHI	GRCGYC	3 cut(s)	1334, 1722, 2137
BsaI	GGTCTC	1 cut(s)	1851
BsaJI	CCNNGG	6 cut(s)	544, 616, 756, 1011, 1892, 2025
BsaWI	WCCGGW	1 cut(s)	1681
BsaXI	ACNNNNNCTCC	6 cut(s)	520, 550, 1457, 1487, 1890, 1920
Bsc4I	CCNNNNNNNGG	9 cut(s)	64, 276, 545, 757, 895, 1125, 1428, 1777, 1951
Bse118I	RCCGGY	4 cut(s)	407, 740, 1391, 1681
Bse1I	ACTGG	3 cut(s)	719, 1088, 1581
Bse21I	CCTNAGG	1 cut(s)	247
Bse3DI	GCAATG	1 cut(s)	2466
Bse8I	GATNNNNATC	2 cut(s)	575, 2307
BseBI	CCWGG	5 cut(s)	321, 545, 757, 937, 971
BseCI	ATCGAT	1 cut(s)	2399
BseDI	CCNNGG	6 cut(s)	544, 616, 756, 1011, 1892, 2025
BseGI	GGATG	6 cut(s)	212, 333, 1299, 1672, 2014, 2535
BseJI	GATNNNNATC	2 cut(s)	575, 2307
BseLI	CCNNNNNNNGG	9 cut(s)	64, 276, 545, 757, 895, 1125, 1428, 1777, 1951
BseMI	GCAATG	1 cut(s)	2466
BseMII	CTCAG	4 cut(s)	459, 1572, 1794, 2643
BseNI	ACTGG	3 cut(s)	719, 1088, 1581
BseSI	GKGCMC	1 cut(s)	2060
BseXI	GCAGC	6 cut(s)	264, 623, 654, 657, 2339, 2449
BseYI	CCCAGC	4 cut(s)	352, 539, 2525, 2541
Bsh1236I	CGCG	6 cut(s)	368, 1013, 1536, 1728, 1930, 1980
BshFI	GGCC	8 cut(s)	68, 324, 888, 1498, 1958, 2024, 2209, 2395
BshNI	GGYRCC	2 cut(s)	1721, 2057
BshTI	ACCGGT	1 cut(s)	1681
BshVI	ATCGAT	1 cut(s)	2399
BsiHKAI	GWGCWC	1 cut(s)	1994
BsiHKCI	CYCGRG	2 cut(s)	1304, 1706
BsiSI	CCGG	8 cut(s)	69, 129, 408, 741, 889, 1392, 1682, 2123
BslFI	GGGAC	3 cut(s)	773, 1142, 1861
BslI	CCNNNNNNNGG	9 cut(s)	64, 276, 545, 757, 895, 1125, 1428, 1777, 1951
BsmAI	GTCTC	4 cut(s)	464, 1536, 1788, 1851
BsmFI	GGGAC	3 cut(s)	773, 1142, 1861
BsmI	GAATGC	1 cut(s)	286
BsnI	GGCC	8 cut(s)	68, 324, 888, 1498, 1958, 2024, 2209, 2395
Bso31I	GGTCTC	1 cut(s)	1851
BsoBI	CYCGRG	2 cut(s)	1304, 1706
Bsp119I	TTCGAA	1 cut(s)	2561
Bsp1286I	GDGCHC	2 cut(s)	1994, 2060
Bsp1407I	TGTACA	2 cut(s)	1650, 1866
BspANI	GGCC	8 cut(s)	68, 324, 888, 1498, 1958, 2024, 2209, 2395
BspCNI	CTCAG	4 cut(s)	460, 1573, 1795, 2644
BspDI	ATCGAT	1 cut(s)	2399
BspFNI	CGCG	6 cut(s)	368, 1013, 1536, 1728, 1930, 1980
BspMAI	CTGCAG	2 cut(s)	687, 2439
BspPI	GGATC	6 cut(s)	578, 947, 992, 2297, 2657, 2670
BspQI	GCTCTTC	1 cut(s)	1982
BspT104I	TTCGAA	1 cut(s)	2561
BspT107I	GGYRCC	2 cut(s)	1721, 2057
BspTNI	GGTCTC	1 cut(s)	1851
BsrBI	CCGCTC	2 cut(s)	680, 2392
BsrDI	GCAATG	1 cut(s)	2466
BsrFI	RCCGGY	4 cut(s)	407, 740, 1391, 1681
BsrGI	TGTACA	2 cut(s)	1650, 1866
BsrI	ACTGG	3 cut(s)	719, 1088, 1581
BssAI	RCCGGY	4 cut(s)	407, 740, 1391, 1681
BssECI	CCNNGG	6 cut(s)	544, 616, 756, 1011, 1892, 2025
BssNI	GRCGYC	3 cut(s)	1334, 1722, 2137
BssT1I	CCWWGG	2 cut(s)	616, 2025
Bst2UI	CCWGG	5 cut(s)	321, 545, 757, 937, 971
Bst4CI	ACNGT	5 cut(s)	119, 237, 1551, 2092, 2671
Bst6I	CTCTTC	2 cut(s)	864, 1982
BstACI	GRCGYC	3 cut(s)	1334, 1722, 2137
BstAUI	TGTACA	2 cut(s)	1650, 1866
BstBAI	YACGTR	1 cut(s)	1844
BstBI	TTCGAA	1 cut(s)	2561
BstC8I	GCNNGC	5 cut(s)	1068, 1380, 1726, 2211, 2358
BstDEI	CTNAG	7 cut(s)	247, 468, 781, 1581, 1803, 2312, 2652
BstDSI	CCRYGG	2 cut(s)	1011, 1892
BstF5I	GGATG	6 cut(s)	212, 333, 1299, 1672, 2014, 2535
BstFNI	CGCG	6 cut(s)	368, 1013, 1536, 1728, 1930, 1980
BstH2I	RGCGCY	1 cut(s)	1725
BstHHI	GCGC	4 cut(s)	865, 1724, 1930, 1965
BstMAI	GTCTC	4 cut(s)	464, 1536, 1788, 1851
BstNI	CCWGG	5 cut(s)	321, 545, 757, 937, 971
BstNSI	RCATGY	3 cut(s)	748, 2337, 2635
BstPAI	GACNNNNGTC	1 cut(s)	1560
BstSCI	CCNGG	6 cut(s)	319, 543, 755, 935, 969, 2121
BstSFI	CTRYAG	5 cut(s)	683, 948, 1089, 2131, 2435
BstSLI	GKGCMC	1 cut(s)	2060
BstUI	CGCG	6 cut(s)	368, 1013, 1536, 1728, 1930, 1980
BstV1I	GCAGC	6 cut(s)	264, 623, 654, 657, 2339, 2449
BstV2I	GAAGAC	1 cut(s)	741
BstX2I	RGATCY	2 cut(s)	952, 2662
BstXI	CCANNNNNNTGG	3 cut(s)	623, 1684, 1893
BstYI	RGATCY	2 cut(s)	952, 2662
Bsu15I	ATCGAT	1 cut(s)	2399
Bsu36I	CCTNAGG	1 cut(s)	247
BsuI	GTATCC	1 cut(s)	545
BsuRI	GGCC	8 cut(s)	68, 324, 888, 1498, 1958, 2024, 2209, 2395
BsuTUI	ATCGAT	1 cut(s)	2399
BtgI	CCRYGG	2 cut(s)	1011, 1892
BtgZI	GCGATG	1 cut(s)	2607
BtrI	CACGTC	1 cut(s)	1984
BtsCI	GGATG	6 cut(s)	212, 333, 1299, 1672, 2014, 2535
BtsI	GCAGTG	2 cut(s)	858, 2432
BtsIMutI	CAGTG	8 cut(s)	148, 858, 1081, 1574, 1800, 2097, 2432, 2667
Cac8I	GCNNGC	5 cut(s)	1068, 1380, 1726, 2211, 2358
CfoI	GCGC	4 cut(s)	865, 1724, 1930, 1965
Cfr10I	RCCGGY	4 cut(s)	407, 740, 1391, 1681
Cfr13I	GGNCC	9 cut(s)	760, 886, 1295, 1496, 1555, 1674, 1848, 1956, 2259
Cfr42I	CCGCGG	1 cut(s)	1014
ClaI	ATCGAT	1 cut(s)	2399
CseI	GACGC	1 cut(s)	1323
CsiI	ACCWGGT	1 cut(s)	969
Csp6I	GTAC	7 cut(s)	260, 748, 877, 1651, 1867, 2088, 2128
CspAI	ACCGGT	1 cut(s)	1681
CspCI	CAANNNNNGTGG	4 cut(s)	391, 426, 691, 726
CviAII	CATG	8 cut(s)	580, 586, 745, 1837, 1966, 2334, 2623, 2632
CviQI	GTAC	7 cut(s)	260, 748, 877, 1651, 1867, 2088, 2128
DdeI	CTNAG	7 cut(s)	247, 468, 781, 1581, 1803, 2312, 2652
DinI	GGCGCC	1 cut(s)	1723
DrdI	GACNNNNNNGTC	1 cut(s)	1519
DseDI	GACNNNNNNGTC	1 cut(s)	1519
EaeI	YGGCCR	3 cut(s)	66, 2022, 2393
Eam1104I	CTCTTC	2 cut(s)	864, 1982
EarI	CTCTTC	2 cut(s)	864, 1982
EciI	GGCGGA	3 cut(s)	1308, 1754, 2243
Eco130I	CCWWGG	2 cut(s)	616, 2025
Eco31I	GGTCTC	1 cut(s)	1851
Eco32I	GATATC	1 cut(s)	659
Eco47I	GGWCC	6 cut(s)	760, 1295, 1555, 1674, 1848, 2259
Eco57I	CTGAAG	1 cut(s)	2426
Eco72I	CACGTG	1 cut(s)	1844
Eco81I	CCTNAGG	1 cut(s)	247
Eco88I	CYCGRG	2 cut(s)	1304, 1706
EcoO109I	RGGNCCY	2 cut(s)	760, 1848
EcoRI	GAATTC	2 cut(s)	293, 485
EcoRII	CCWGG	5 cut(s)	319, 543, 755, 935, 969
EcoRV	GATATC	1 cut(s)	659
EcoT14I	CCWWGG	2 cut(s)	616, 2025
EgeI	GGCGCC	1 cut(s)	1723
EheI	GGCGCC	1 cut(s)	1723
ErhI	CCWWGG	2 cut(s)	616, 2025
FaeI	CATG	8 cut(s)	583, 589, 748, 1840, 1969, 2337, 2626, 2635
FaqI	GGGAC	3 cut(s)	773, 1142, 1861
FatI	CATG	8 cut(s)	579, 585, 744, 1836, 1965, 2333, 2622, 2631
FauI	CCCGC	1 cut(s)	1733
FokI	GGATG	6 cut(s)	199, 320, 1286, 1679, 2021, 2542
FspBI	CTAG	5 cut(s)	630, 1347, 2249, 2268, 2586
GlaI	GCGC	4 cut(s)	864, 1723, 1929, 1964
GsaI	CCCAGC	4 cut(s)	356, 543, 2529, 2545
GsuI	CTGGAG	2 cut(s)	958, 1459
HaeII	RGCGCY	1 cut(s)	1725
HaeIII	GGCC	8 cut(s)	68, 324, 888, 1498, 1958, 2024, 2209, 2395
HapII	CCGG	8 cut(s)	69, 129, 408, 741, 889, 1392, 1682, 2123
HgaI	GACGC	1 cut(s)	1323
HhaI	GCGC	4 cut(s)	865, 1724, 1930, 1965
Hin1I	GRCGYC	3 cut(s)	1334, 1722, 2137
Hin1II	CATG	8 cut(s)	583, 589, 748, 1840, 1969, 2337, 2626, 2635
Hin6I	GCGC	4 cut(s)	863, 1722, 1928, 1963
HinP1I	GCGC	4 cut(s)	863, 1722, 1928, 1963
HincII	GTYRAC	2 cut(s)	1524, 2148
HindII	GTYRAC	2 cut(s)	1524, 2148
HpaII	CCGG	8 cut(s)	69, 129, 408, 741, 889, 1392, 1682, 2123
HphI	GGTGA	9 cut(s)	46, 100, 182, 259, 925, 985, 1823, 2107, 2501
Hpy166II	GTNNAC	6 cut(s)	877, 1524, 1651, 1677, 2148, 2167
Hpy188III	TCNNGA	7 cut(s)	813, 956, 1208, 1347, 1735, 2117, 2637
Hpy8I	GTNNAC	6 cut(s)	877, 1524, 1651, 1677, 2148, 2167
HpyAV	CCTTC	3 cut(s)	1955, 2092, 2480
HpyCH4III	ACNGT	5 cut(s)	119, 237, 1551, 2092, 2671
HpyCH4IV	ACGT	8 cut(s)	705, 1647, 1843, 1983, 2137, 2163, 2409, 2475
HpyF3I	CTNAG	7 cut(s)	247, 468, 781, 1581, 1803, 2312, 2652
HpySE526I	ACGT	8 cut(s)	705, 1647, 1843, 1983, 2137, 2163, 2409, 2475
Hsp92I	GRCGYC	3 cut(s)	1334, 1722, 2137
Hsp92II	CATG	8 cut(s)	583, 589, 748, 1840, 1969, 2337, 2626, 2635
HspAI	GCGC	4 cut(s)	863, 1722, 1928, 1963
KasI	GGCGCC	1 cut(s)	1721
KflI	GGGWCCC	2 cut(s)	760, 1848
KspI	CCGCGG	1 cut(s)	1014
LguI	GCTCTTC	1 cut(s)	1982
LmnI	GCTCC	2 cut(s)	984, 1911
Lsp1109I	GCAGC	6 cut(s)	264, 623, 654, 657, 2339, 2449
LweI	GCATC	4 cut(s)	1134, 1225, 1740, 2512
MabI	ACCWGGT	1 cut(s)	969
MaeI	CTAG	5 cut(s)	630, 1347, 2249, 2268, 2586
MaeII	ACGT	8 cut(s)	705, 1647, 1843, 1983, 2137, 2163, 2409, 2475
MaeIII	GTNAC	3 cut(s)	52, 170, 1565
MbiI	CCGCTC	2 cut(s)	680, 2392
MflI	RGATCY	2 cut(s)	952, 2662
MhlI	GDGCHC	2 cut(s)	1994, 2060
MlsI	TGGCCA	1 cut(s)	2024
MluCI	AATT	8 cut(s)	293, 453, 485, 799, 835, 1048, 1911, 2601
MluNI	TGGCCA	1 cut(s)	2024
Mly113I	GGCGCC	1 cut(s)	1722
MlyI	GAGTC	5 cut(s)	83, 526, 1460, 1718, 2071
MmeI	TCCRAC	8 cut(s)	119, 202, 1317, 1494, 1533, 1771, 2496, 2535
Mox20I	TGGCCA	1 cut(s)	2024
MscI	TGGCCA	1 cut(s)	2024
MseI	TTAA	8 cut(s)	24, 114, 564, 666, 852, 1179, 2289, 2507
MslI	CAYNNNNRTG	6 cut(s)	584, 743, 987, 1682, 1891, 2277
Msp20I	TGGCCA	1 cut(s)	2024
MspA1I	CMGCKG	3 cut(s)	514, 1013, 1058
MspI	CCGG	8 cut(s)	69, 129, 408, 741, 889, 1392, 1682, 2123
MspR9I	CCNGG	6 cut(s)	321, 545, 757, 937, 971, 2123
Mva1269I	GAATGC	1 cut(s)	286
MvaI	CCWGG	5 cut(s)	321, 545, 757, 937, 971
MvnI	CGCG	6 cut(s)	368, 1013, 1536, 1728, 1930, 1980
NarI	GGCGCC	1 cut(s)	1722
NciI	CCSGG	1 cut(s)	2123
NlaIII	CATG	8 cut(s)	583, 589, 748, 1840, 1969, 2337, 2626, 2635
NmeAIII	GCCGAG	3 cut(s)	256, 587, 1269
NmuCI	GTSAC	3 cut(s)	52, 170, 1565
NspI	RCATGY	3 cut(s)	748, 2337, 2635
NspV	TTCGAA	1 cut(s)	2561
OliI	CACNNNNGTG	2 cut(s)	1682, 1891
PciI	ACATGT	1 cut(s)	2333
PciSI	GCTCTTC	1 cut(s)	1982
PcsI	WCGNNNNNNNCGW	2 cut(s)	372, 2558
PctI	GAATGC	1 cut(s)	286
PfeI	GAWTC	9 cut(s)	699, 846, 942, 1101, 1114, 1150, 1369, 2558, 2618
PflFI	GACNNNGTC	2 cut(s)	137, 1519
PinAI	ACCGGT	1 cut(s)	1681
PleI	GAGTC	5 cut(s)	82, 525, 1460, 1717, 2071
PluTI	GGCGCC	1 cut(s)	1725
PmaCI	CACGTG	1 cut(s)	1844
PmlI	CACGTG	1 cut(s)	1844
PpsI	GAGTC	5 cut(s)	82, 525, 1460, 1717, 2071
Ppu21I	YACGTR	1 cut(s)	1844
PpuMI	RGGWCCY	2 cut(s)	760, 1848
PscI	ACATGT	1 cut(s)	2333
PshAI	GACNNNNGTC	1 cut(s)	1560
PshBI	ATTAAT	2 cut(s)	2289, 2507
Psp1406I	AACGTT	1 cut(s)	705
Psp5II	RGGWCCY	2 cut(s)	760, 1848
Psp6I	CCWGG	5 cut(s)	319, 543, 755, 935, 969
PspCI	CACGTG	1 cut(s)	1844
PspFI	CCCAGC	4 cut(s)	352, 539, 2525, 2541
PspGI	CCWGG	5 cut(s)	319, 543, 755, 935, 969
PspPI	GGNCC	9 cut(s)	760, 886, 1295, 1496, 1555, 1674, 1848, 1956, 2259
PspPPI	RGGWCCY	2 cut(s)	760, 1848
PstI	CTGCAG	2 cut(s)	687, 2439
PsuI	RGATCY	2 cut(s)	952, 2662
PsyI	GACNNNGTC	2 cut(s)	137, 1519
PvuII	CAGCTG	1 cut(s)	1058
RsaI	GTAC	7 cut(s)	261, 749, 878, 1652, 1868, 2089, 2129
RsaNI	GTAC	7 cut(s)	260, 748, 877, 1651, 1867, 2088, 2128
RseI	CAYNNNNRTG	6 cut(s)	584, 743, 987, 1682, 1891, 2277
SacII	CCGCGG	1 cut(s)	1014
SapI	GCTCTTC	1 cut(s)	1982
SaqAI	TTAA	8 cut(s)	24, 114, 564, 666, 852, 1179, 2289, 2507
Sau96I	GGNCC	9 cut(s)	760, 886, 1295, 1496, 1555, 1674, 1848, 1956, 2259
ScaI	AGTACT	1 cut(s)	2129
SchI	GAGTC	5 cut(s)	83, 526, 1460, 1718, 2071
ScrFI	CCNGG	6 cut(s)	321, 545, 757, 937, 971, 2123
SduI	GDGCHC	2 cut(s)	1994, 2060
SexAI	ACCWGGT	1 cut(s)	969
SfaNI	GCATC	4 cut(s)	1134, 1225, 1740, 2512
SfcI	CTRYAG	5 cut(s)	683, 948, 1089, 2131, 2435
SfoI	GGCGCC	1 cut(s)	1723
Sfr303I	CCGCGG	1 cut(s)	1014
SfuI	TTCGAA	1 cut(s)	2561
SgrAI	CRCCGGYG	2 cut(s)	1391, 1681
SgrBI	CCGCGG	1 cut(s)	1014
SinI	GGWCC	6 cut(s)	760, 1295, 1555, 1674, 1848, 2259
SmiMI	CAYNNNNRTG	6 cut(s)	584, 743, 987, 1682, 1891, 2277
SmlI	CTYRAG	2 cut(s)	425, 2423
SmoI	CTYRAG	2 cut(s)	425, 2423
SpeI	ACTAGT	2 cut(s)	2267, 2585
Sse9I	AATT	8 cut(s)	293, 453, 485, 799, 835, 1048, 1911, 2601
SspDI	GGCGCC	1 cut(s)	1721
SspI	AATATT	1 cut(s)	1006
SspMI	CTAG	5 cut(s)	630, 1347, 2249, 2268, 2586
StyD4I	CCNGG	6 cut(s)	319, 543, 755, 935, 969, 2121
StyI	CCWWGG	2 cut(s)	616, 2025
TaaI	ACNGT	5 cut(s)	119, 237, 1551, 2092, 2671
TaiI	ACGT	8 cut(s)	708, 1650, 1846, 1986, 2140, 2166, 2412, 2478
TaqII	GACCGA	2 cut(s)	1393, 1754
TasI	AATT	8 cut(s)	293, 453, 485, 799, 835, 1048, 1911, 2601
TatI	WGTACW	4 cut(s)	1650, 1866, 2087, 2127
TauI	GCSGC	5 cut(s)	1016, 1539, 1595, 1928, 2395
TfiI	GAWTC	9 cut(s)	699, 846, 942, 1101, 1114, 1150, 1369, 2558, 2618
Tru1I	TTAA	8 cut(s)	24, 114, 564, 666, 852, 1179, 2289, 2507
Tru9I	TTAA	8 cut(s)	24, 114, 564, 666, 852, 1179, 2289, 2507
TscAI	CASTG	8 cut(s)	148, 865, 1088, 1581, 1807, 2097, 2439, 2674
TseFI	GTSAC	3 cut(s)	52, 170, 1565
TseI	GCWGC	6 cut(s)	252, 611, 642, 645, 2327, 2437
Tsp45I	GTSAC	3 cut(s)	52, 170, 1565
TspGWI	ACGGA	3 cut(s)	1165, 1411, 1881
TspRI	CASTG	8 cut(s)	148, 865, 1088, 1581, 1807, 2097, 2439, 2674
Tth111I	GACNNNGTC	2 cut(s)	137, 1519
VpaK11BI	GGWCC	6 cut(s)	760, 1295, 1555, 1674, 1848, 2259
VspI	ATTAAT	2 cut(s)	2289, 2507
XapI	RAATTY	6 cut(s)	293, 453, 485, 799, 1911, 2601
XbaI	TCTAGA	1 cut(s)	1346
XceI	RCATGY	3 cut(s)	748, 2337, 2635
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1890, 1916
XspI	CTAG	5 cut(s)	630, 1347, 2249, 2268, 2586
ZraI	GACGTC	1 cut(s)	2138
ZrmI	AGTACT	1 cut(s)	2129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.