Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

4566776 .. 4569241

Gene Structure 2466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g06370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGAGAACCCCAACGGCAAACACCGTAATAAGATTCTCACTCCTCTTCTCCTTCCCCTTTTTATCCATATGATAACCATGTGCATGGCCGGGGACTCGCCGCCAATCTACCATCCGTCTGAACAAATCACCCTTCAATGTGGCTCTTCCGGTTTCCAATTTAGCGAAAACTACGACCGACCATGGTATGGAGATATGCACTCAGAACCTTTTCCATTCAAATTCCAAGCAGCTGTTAACAAATCGATATCCAAAGAAGTAAATTTCACCACGCCTTACAGCACAGCAAGGCTTTCCCGCTTTGAATTTACCTACACATTTCCACTCTCTTCCGGCCTAAAGTTCATCCGCTTGTATTTCTACCCAGCTTCATACGCCCCCAACTTCGACCGGTCCCAAGCCCTCTTCTCAGTCGAAACCGGTGGTTTTACCCTTCTCCGCGACTTCAATGCTTCAGCCACGGTTGATGCTTCTGGCTTGGATACCATGTACAGAGAGTTCACTCCAAGCAAAACAAGCCCAGATGCCTACGCGTTTATCAATGGGATTGAAATTATCTCCATGCCCCCATATCTTTACTACACTTCACCCCAGAGCCCAGTTGGGGTTGCTTATGTAGGCTGCGAAAACACGTTTCGCATTGAGAACAACACTGCTCTGGAGATGGTGTACCGAATCAATATCGGTTACGAAACGAGGATCTCTTCCGATCTGGACACTGGTATGTACCGCAATTGGGATGGTTTGGCAGATGAGTACAACTACCTAGACGATTTAAGTAGGAAGTATAGTGTGTTACCGCTAAACATTAGCGTTCAGCTTAACTTTTCTAAAATACCAGCGTACTCTGCTCTGAAAGAAGTTTACCAAACCGGCCGCTCAATGGACACCGTAAGCAACAACCACAATCTTACCTGGGAATTCCCTGTGGATTCAATGTTTGCTTACTTGGTTAGGCTTCATTTTTGTGAGTTTAATAGTGATGTTACCATGCCCGGAGAACGGGGATTTAACATCTACATCGCCAATCAATCCGCTGAGAAAATGGCGGATATAATCGAGTGGTCTGGTGGAAATGGAAGACCAGTGTACAGAGACTACCATGTGTTCATGTTGGGGAACCCTGCAATCCCGAAGAAAGTCAATCTCTTTCTTGCACTGGAAGTGGATTGGTATCATGGGTACAGTGAGGCAATCTTGAACGGACTCGAAATGTTCAAACTCAGTGCAAACCGGAATCTCGCTGGACCAAGCCCTGACCCACCTCCTATAGCCCCAGCAAAGGGGACACCATCAAAACCTAGCACCAGATCAAGAACTCCTTTGCTTGCCACGGTTGTCGGTGTAGATTGCGGAATACTTGGACTTTCTGTCCTTAGGTTCTTGGTTTTTAGGCGGCGGCGGAAAGTCAAGGGCACTGCCTCAGATGGCTCATCATCTTTACCAACACATTTGTGTCGTTACTTTTCACTGGCGGAGATCAAAGCCACCACCCAAAACTTCAGCCAGAGTTTCATTGTTGGTGTTGGCGGCTTCGATCACGTGTACAAAGGGCATATCGACGGCGGTGCCACTCCCGTTGCTATCAAACGGCTGAAACCCGAGTCATCGCAAGGAGCCCGCAAGTTCAAGACGGAAATCGAGCTGCTCTCACAACTCAGACACCGCCATTTGGTGTTTCTCATTGGGTATTGTACTGATCAAAATGAGATGATTTTAGTGTACGATTACATGGCACGTGGGACCCTCACCGATCACCTCTACCACACCGACAACCCACCTCTCTCCTGGGGACAACGGCTCCAAATTTGCATTAGCGCCGCACGAGGGTTGCGCTACCTTCACAGCGATGCCCAGGGCACTATCATCCACCGTGATGTGAAGAGCACAAACATTTTATTGGATGAGAAATGGGTGGCCAAGGTTTCGGATTTCGGATTGTCGAAAGTGGGCACGGCCACCATGTCCAAGACCCACATCAGCACAGTCGTGAAAGGCAGTTTCGGGTATCTAGACCCGGAATACTATCGACATCAACAACTGACGGTGAAGTCCGATGTGTACTCATTCGGTGTAGTGTTGTGTGAAGTATTGTGCGCAAGACCAGCTGTGGTGCATGCACTGGAGACGAGGCAAATGAACTTGGCTGAGTGGACCAAATGCTGTCATCGCAACGGGGAACTTGATCAAATCATTGATCCGAACATGAAGGGTAAGATTGAAACCGAGTGTTTGAACAAGTATGTGGAAATTGCTATGAGTTGCATCAATGATAGTGGGATGGAAATGCCGTCAATGAACGACGTTGTGAGGGGGCTTGAGTTTGCATTGCAACAACATCAGAACTGCGGTGAAAGGAACAACGAGGATGCCTTCGCTACCGTGCCAGGTTGCACTATGAATGAATCCGTTCAGTGCATATCTAAGACGATCATCTCAGAGATCAACGATCTGAATGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

822

Amino Acids

92.32

Weight (kDa)

6.53

Isoelectric Point (pI)

44.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	76 - 407	4.5e-20	Malectin-like domain
Malectin	PF11721	247 - 370	9.3e-10	Malectin domain
Pkinase	PF00069	506 - 724	2.7e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	507 - 771	2.3e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2050
Acc16I	TGCGCA	1 cut(s)	2098
AccB1I	GGYRCC	1 cut(s)	1568
AccB7I	CCANNNNNTGG	1 cut(s)	188
AccBSI	CCGCTC	1 cut(s)	879
AccII	CGCG	2 cut(s)	441, 533
AclWI	GGATC	2 cut(s)	707, 2192
AcoI	YGGCCR	4 cut(s)	87, 874, 1917, 1956
AcsI	RAATTY	5 cut(s)	221, 262, 305, 920, 1806
AcuI	CTGAAG	2 cut(s)	438, 1486
AcvI	CACGTG	2 cut(s)	1543, 1739
AfiI	CCNNNNNNNGG	9 cut(s)	188, 604, 736, 883, 1002, 1282, 1283, 1672, 1827
AflIII	ACRYGT	3 cut(s)	531, 630, 1542
AgeI	ACCGGT	2 cut(s)	390, 419
AhdI	GACNNNNNGTC	1 cut(s)	1370
AjnI	CCWGG	4 cut(s)	914, 1787, 1854, 2386
AleI	CACNNNNGTG	2 cut(s)	1453, 1988
AluBI	AGCT	5 cut(s)	233, 368, 820, 1645, 2108
AluI	AGCT	5 cut(s)	233, 368, 820, 1645, 2108
Alw21I	GWGCWC	1 cut(s)	1889
Alw26I	GTCTC	2 cut(s)	1089, 2120
AlwI	GGATC	2 cut(s)	707, 2192
Ama87I	CYCGRG	1 cut(s)	1601
AoxI	GGCC	5 cut(s)	87, 334, 874, 1917, 1956
ApeKI	GCWGC	3 cut(s)	230, 621, 1645
ApoI	RAATTY	5 cut(s)	221, 262, 305, 920, 1806
AsiGI	ACCGGT	2 cut(s)	390, 419
Asp700I	GAANNNNTTC	2 cut(s)	210, 2409
AspLEI	GCGC	3 cut(s)	1820, 1836, 2099
AspS9I	GGNCC	4 cut(s)	393, 1247, 1743, 2154
AsuC2I	CCSGG	3 cut(s)	91, 996, 2018
AsuHPI	GGTGA	7 cut(s)	121, 259, 579, 1741, 1748, 2059, 2363
AvaI	CYCGRG	1 cut(s)	1601
AvaII	GGWCC	4 cut(s)	393, 1247, 1743, 2154
AxyI	CCTNAGG	1 cut(s)	1376
BaeGI	GKGCMC	3 cut(s)	1418, 1862, 1955
BalI	TGGCCA	1 cut(s)	1919
BanI	GGYRCC	1 cut(s)	1568
BanII	GRGCYC	2 cut(s)	599, 1621
BauI	CACGAG	1 cut(s)	1824
BbrPI	CACGTG	2 cut(s)	1543, 1739
BbsI	GAAGAC	1 cut(s)	1087
Bbv12I	GWGCWC	1 cut(s)	1889
BbvI	GCAGC	3 cut(s)	242, 608, 1632
BccI	CCATC	6 cut(s)	120, 658, 734, 1300, 1421, 2275
BceAI	ACGGC	6 cut(s)	31, 1579, 1607, 1814, 1971, 2275
BcgI	CGANNNNNNTGC	4 cut(s)	431, 465, 1550, 1584
BciT130I	CCWGG	4 cut(s)	916, 1789, 1856, 2388
BciVI	GTATCC	1 cut(s)	475
BclI	TGATCA	2 cut(s)	1699, 2185
BcnI	CCSGG	3 cut(s)	91, 996, 2018
BcoDI	GTCTC	2 cut(s)	1089, 2120
BfaI	CTAG	3 cut(s)	767, 1302, 2012
BfmI	CTRYAG	1 cut(s)	1269
BfoI	RGCGCY	1 cut(s)	1821
BfuI	GTATCC	1 cut(s)	475
BisI	GCNGC	9 cut(s)	101, 231, 622, 877, 1397, 1400, 1531, 1646, 1821
BlsI	GCNGC	9 cut(s)	102, 232, 623, 878, 1398, 1401, 1532, 1647, 1822
Bme1390I	CCNGG	7 cut(s)	91, 916, 996, 1789, 1856, 2018, 2388
Bme18I	GGWCC	4 cut(s)	393, 1247, 1743, 2154
BmeRI	GACNNNNNGTC	1 cut(s)	1370
BmeT110I	CYCGRG	1 cut(s)	1601
BmgT120I	GGNCC	4 cut(s)	393, 1247, 1743, 2154
BmiI	GGNNCC	7 cut(s)	395, 1121, 1570, 1618, 1744, 1745, 1802
BmrFI	CCNGG	7 cut(s)	91, 916, 996, 1789, 1856, 2018, 2388
BmrI	ACTGGG	1 cut(s)	593
BmsI	GCATC	5 cut(s)	457, 514, 1840, 2274, 2359
BmuI	ACTGGG	1 cut(s)	593
BpiI	GAAGAC	1 cut(s)	1087
BplI	GAGNNNNNCTC	2 cut(s)	1634, 1666
BpmI	CTGGAG	2 cut(s)	680, 2144
BpuEI	CTTGAG	1 cut(s)	2339
BpuMI	CCSGG	3 cut(s)	91, 996, 2018
Bsa29I	ATCGAT	1 cut(s)	245
BsaAI	YACGTR	2 cut(s)	1543, 1739
BsaBI	GATNNNNATC	1 cut(s)	1173
BsaJI	CCNNGG	9 cut(s)	90, 182, 459, 915, 1332, 1788, 1854, 1855, 1920
BsaWI	WCCGGW	4 cut(s)	149, 390, 419, 1233
BsaXI	ACNNNNNCTCC	4 cut(s)	653, 683, 1785, 1815
Bsc4I	CCNNNNNNNGG	9 cut(s)	188, 604, 736, 883, 1002, 1282, 1283, 1672, 1827
Bse118I	RCCGGY	3 cut(s)	390, 419, 872
Bse1I	ACTGG	6 cut(s)	599, 724, 1085, 1164, 1476, 2127
Bse21I	CCTNAGG	1 cut(s)	1376
Bse3DI	GCAATG	1 cut(s)	2327
Bse8I	GATNNNNATC	1 cut(s)	1173
BseBI	CCWGG	4 cut(s)	916, 1789, 1856, 2388
BseCI	ATCGAT	1 cut(s)	245
BseDI	CCNNGG	9 cut(s)	90, 182, 459, 915, 1332, 1788, 1854, 1855, 1920
BseGI	GGATG	7 cut(s)	112, 345, 745, 1866, 1909, 2286, 2374
BseJI	GATNNNNATC	1 cut(s)	1173
BseLI	CCNNNNNNNGG	9 cut(s)	188, 604, 736, 883, 1002, 1282, 1283, 1672, 1827
BseMI	GCAATG	1 cut(s)	2327
BseMII	CTCAG	8 cut(s)	216, 423, 1029, 1237, 1437, 1672, 2139, 2451
BseNI	ACTGG	6 cut(s)	599, 724, 1085, 1164, 1476, 2127
BseRI	GAGGAG	1 cut(s)	33
BseSI	GKGCMC	3 cut(s)	1418, 1862, 1955
BseX3I	CGGCCG	1 cut(s)	874
BseXI	GCAGC	3 cut(s)	242, 608, 1632
BseYI	CCCAGC	2 cut(s)	364, 1276
Bsh1236I	CGCG	2 cut(s)	441, 533
Bsh1285I	CGRYCG	3 cut(s)	178, 391, 877
BshFI	GGCC	5 cut(s)	89, 336, 876, 1919, 1958
BshNI	GGYRCC	1 cut(s)	1568
BshTI	ACCGGT	2 cut(s)	390, 419
BshVI	ATCGAT	1 cut(s)	245
BsiEI	CGRYCG	3 cut(s)	178, 391, 877
BsiHKAI	GWGCWC	1 cut(s)	1889
BsiHKCI	CYCGRG	1 cut(s)	1601
BsiSI	CCGG	9 cut(s)	90, 150, 333, 391, 420, 873, 996, 1234, 2018
BslFI	GGGAC	5 cut(s)	107, 379, 1300, 1756, 1806
BslI	CCNNNNNNNGG	9 cut(s)	188, 604, 736, 883, 1002, 1282, 1283, 1672, 1827
BsmAI	GTCTC	2 cut(s)	1089, 2120
BsmBI	CGTCTC	1 cut(s)	2120
BsmFI	GGGAC	5 cut(s)	107, 379, 1300, 1756, 1806
BsnI	GGCC	5 cut(s)	89, 336, 876, 1919, 1958
BsoBI	CYCGRG	1 cut(s)	1601
Bsp1286I	GDGCHC	6 cut(s)	599, 1418, 1621, 1862, 1889, 1955
Bsp1407I	TGTACA	3 cut(s)	489, 1089, 1545
Bsp19I	CCATGG	1 cut(s)	182
BspANI	GGCC	5 cut(s)	89, 336, 876, 1919, 1958
BspCNI	CTCAG	8 cut(s)	215, 422, 1030, 1236, 1436, 1671, 2140, 2450
BspDI	ATCGAT	1 cut(s)	245
BspFNI	CGCG	2 cut(s)	441, 533
BspLI	GGNNCC	7 cut(s)	395, 1121, 1570, 1618, 1744, 1745, 1802
BspPI	GGATC	2 cut(s)	707, 2192
BspQI	GCTCTTC	2 cut(s)	151, 1877
BspT107I	GGYRCC	1 cut(s)	1568
BsrBI	CCGCTC	1 cut(s)	879
BsrDI	GCAATG	1 cut(s)	2327
BsrFI	RCCGGY	3 cut(s)	390, 419, 872
BsrGI	TGTACA	3 cut(s)	489, 1089, 1545
BsrI	ACTGG	6 cut(s)	599, 724, 1085, 1164, 1476, 2127
BssAI	RCCGGY	3 cut(s)	390, 419, 872
BssECI	CCNNGG	9 cut(s)	90, 182, 459, 915, 1332, 1788, 1854, 1855, 1920
BssSI	CACGAG	1 cut(s)	1824
BssT1I	CCWWGG	2 cut(s)	182, 1920
Bst2BI	CACGAG	1 cut(s)	1824
Bst2UI	CCWGG	4 cut(s)	916, 1789, 1856, 2388
Bst4CI	ACNGT	9 cut(s)	26, 463, 892, 1187, 1336, 1874, 1987, 2047, 2383
Bst6I	CTCTTC	6 cut(s)	51, 151, 334, 410, 709, 1877
BstAUI	TGTACA	3 cut(s)	489, 1089, 1545
BstBAI	YACGTR	2 cut(s)	1543, 1739
BstC8I	GCNNGC	3 cut(s)	1329, 1621, 2118
BstDSI	CCRYGG	3 cut(s)	182, 459, 1332
BstF5I	GGATG	7 cut(s)	112, 345, 745, 1866, 1909, 2286, 2374
BstFNI	CGCG	2 cut(s)	441, 533
BstH2I	RGCGCY	1 cut(s)	1821
BstHHI	GCGC	3 cut(s)	1820, 1836, 2099
BstMAI	GTCTC	2 cut(s)	1089, 2120
BstMCI	CGRYCG	3 cut(s)	178, 391, 877
BstMWI	GCNNNNNNNGC	5 cut(s)	374, 516, 848, 2105, 2169
BstNI	CCWGG	4 cut(s)	916, 1789, 1856, 2388
BstNSI	RCATGY	1 cut(s)	2120
BstSCI	CCNGG	7 cut(s)	89, 914, 994, 1787, 1854, 2016, 2386
BstSFI	CTRYAG	1 cut(s)	1269
BstSLI	GKGCMC	3 cut(s)	1418, 1862, 1955
BstUI	CGCG	2 cut(s)	441, 533
BstV1I	GCAGC	3 cut(s)	242, 608, 1632
BstV2I	GAAGAC	1 cut(s)	1087
BstX2I	RGATCY	1 cut(s)	699
BstXI	CCANNNNNNTGG	1 cut(s)	85
BstYI	RGATCY	1 cut(s)	699
BstZI	CGGCCG	1 cut(s)	874
Bsu15I	ATCGAT	1 cut(s)	245
Bsu36I	CCTNAGG	1 cut(s)	1376
BsuI	GTATCC	1 cut(s)	475
BsuRI	GGCC	5 cut(s)	89, 336, 876, 1919, 1958
BsuTUI	ATCGAT	1 cut(s)	245
BtgI	CCRYGG	3 cut(s)	182, 459, 1332
BtgZI	GCGATG	4 cut(s)	1006, 1593, 1863, 2153
BtsCI	GGATG	7 cut(s)	112, 345, 745, 1866, 1909, 2286, 2374
BtsI	GCAGTG	2 cut(s)	651, 1416
Cac8I	GCNNGC	3 cut(s)	1329, 1621, 2118
CfoI	GCGC	3 cut(s)	1820, 1836, 2099
Cfr10I	RCCGGY	3 cut(s)	390, 419, 872
Cfr13I	GGNCC	4 cut(s)	393, 1247, 1743, 2154
ClaI	ATCGAT	1 cut(s)	245
CspAI	ACCGGT	2 cut(s)	390, 419
CspCI	CAANNNNNGTGG	4 cut(s)	1561, 1596, 2257, 2292
DrdI	GACNNNNNNGTC	1 cut(s)	2050
DriI	GACNNNNNGTC	1 cut(s)	1370
DseDI	GACNNNNNNGTC	1 cut(s)	2050
EaeI	YGGCCR	4 cut(s)	87, 874, 1917, 1956
EagI	CGGCCG	1 cut(s)	874
Eam1104I	CTCTTC	6 cut(s)	51, 151, 334, 410, 709, 1877
Eam1105I	GACNNNNNGTC	1 cut(s)	1370
EarI	CTCTTC	6 cut(s)	51, 151, 334, 410, 709, 1877
EciI	GGCGGA	3 cut(s)	1064, 1417, 1490
EclXI	CGGCCG	1 cut(s)	874
Eco130I	CCWWGG	2 cut(s)	182, 1920
Eco24I	GRGCYC	2 cut(s)	599, 1621
Eco32I	GATATC	1 cut(s)	249
Eco47I	GGWCC	4 cut(s)	393, 1247, 1743, 2154
Eco52I	CGGCCG	1 cut(s)	874
Eco57I	CTGAAG	2 cut(s)	438, 1486
Eco72I	CACGTG	2 cut(s)	1543, 1739
Eco81I	CCTNAGG	1 cut(s)	1376
Eco88I	CYCGRG	1 cut(s)	1601
EcoO109I	RGGNCCY	1 cut(s)	1743
EcoRI	GAATTC	1 cut(s)	920
EcoRII	CCWGG	4 cut(s)	914, 1787, 1854, 2386
EcoRV	GATATC	1 cut(s)	249
EcoT14I	CCWWGG	2 cut(s)	182, 1920
EcoT38I	GRGCYC	2 cut(s)	599, 1621
ErhI	CCWWGG	2 cut(s)	182, 1920
Esp3I	CGTCTC	1 cut(s)	2120
FalI	AAGNNNNNCTT	2 cut(s)	1306, 1338
FaqI	GGGAC	5 cut(s)	107, 379, 1300, 1756, 1806
FauI	CCCGC	2 cut(s)	305, 1628
FauNDI	CATATG	1 cut(s)	69
FbaI	TGATCA	2 cut(s)	1699, 2185
Fnu4HI	GCNGC	9 cut(s)	101, 231, 622, 877, 1397, 1400, 1531, 1646, 1821
FokI	GGATG	7 cut(s)	99, 332, 752, 1853, 1916, 2293, 2381
FriOI	GRGCYC	2 cut(s)	599, 1621
Fsp4HI	GCNGC	9 cut(s)	101, 231, 622, 877, 1397, 1400, 1531, 1646, 1821
FspBI	CTAG	3 cut(s)	767, 1302, 2012
FspI	TGCGCA	1 cut(s)	2098
GlaI	GCGC	3 cut(s)	1819, 1835, 2098
GluI	GCNGC	9 cut(s)	101, 231, 622, 877, 1397, 1400, 1531, 1646, 1821
GsaI	CCCAGC	2 cut(s)	368, 1280
GsuI	CTGGAG	2 cut(s)	680, 2144
HaeII	RGCGCY	1 cut(s)	1821
HaeIII	GGCC	5 cut(s)	89, 336, 876, 1919, 1958
HapII	CCGG	9 cut(s)	90, 150, 333, 391, 420, 873, 996, 1234, 2018
HhaI	GCGC	3 cut(s)	1820, 1836, 2099
Hin6I	GCGC	3 cut(s)	1818, 1834, 2097
HinP1I	GCGC	3 cut(s)	1818, 1834, 2097
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HinfI	GANTC	8 cut(s)	34, 95, 675, 932, 1206, 1237, 1604, 2405
HpaI	GTTAAC	1 cut(s)	238
HpaII	CCGG	9 cut(s)	90, 150, 333, 391, 420, 873, 996, 1234, 2018
HphI	GGTGA	7 cut(s)	121, 259, 579, 1741, 1748, 2059, 2363
Hpy166II	GTNNAC	9 cut(s)	238, 501, 670, 865, 1090, 1546, 1723, 2062, 2154
Hpy188III	TCNNGA	8 cut(s)	659, 713, 1132, 1198, 1314, 1630, 1990, 2012
Hpy8I	GTNNAC	9 cut(s)	238, 501, 670, 865, 1090, 1546, 1723, 2062, 2154
Hpy99I	CGWCG	2 cut(s)	1565, 2306
HpyAV	CCTTC	6 cut(s)	62, 143, 443, 1850, 2203, 2383
HpyCH4III	ACNGT	9 cut(s)	26, 463, 892, 1187, 1336, 1874, 1987, 2047, 2383
HpyCH4IV	ACGT	4 cut(s)	632, 1542, 1738, 2304
HpyF10VI	GCNNNNNNNGC	5 cut(s)	374, 516, 848, 2105, 2169
HpySE526I	ACGT	4 cut(s)	632, 1542, 1738, 2304
HspAI	GCGC	3 cut(s)	1818, 1834, 2097
KflI	GGGWCCC	1 cut(s)	1743
Ksp22I	TGATCA	2 cut(s)	1699, 2185
KspAI	GTTAAC	1 cut(s)	238
LguI	GCTCTTC	2 cut(s)	151, 1877
LmnI	GCTCC	2 cut(s)	1616, 1806
Lsp1109I	GCAGC	3 cut(s)	242, 608, 1632
LweI	GCATC	5 cut(s)	457, 514, 1840, 2274, 2359
MaeI	CTAG	3 cut(s)	767, 1302, 2012
MaeII	ACGT	4 cut(s)	632, 1542, 1738, 2304
MaeIII	GTNAC	4 cut(s)	686, 795, 985, 1460
MbiI	CCGCTC	1 cut(s)	879
MboII	GAAGA	8 cut(s)	38, 138, 321, 397, 696, 1092, 1147, 1894
MfeI	CAATTG	1 cut(s)	733
MflI	RGATCY	1 cut(s)	699
MhlI	GDGCHC	6 cut(s)	599, 1418, 1621, 1862, 1889, 1955
MlsI	TGGCCA	1 cut(s)	1919
MluCI	AATT	9 cut(s)	158, 221, 262, 305, 552, 733, 920, 1806, 2250
MluI	ACGCGT	1 cut(s)	531
MluNI	TGGCCA	1 cut(s)	1919
MlyI	GAGTC	3 cut(s)	89, 1200, 1613
Mox20I	TGGCCA	1 cut(s)	1919
MroXI	GAANNNNTTC	2 cut(s)	210, 2409
MscI	TGGCCA	1 cut(s)	1919
MseI	TTAA	5 cut(s)	237, 776, 822, 975, 1011
MslI	CAYNNNNRTG	7 cut(s)	83, 722, 966, 1453, 1848, 1875, 1988
Msp20I	TGGCCA	1 cut(s)	1919
MspA1I	CMGCKG	3 cut(s)	233, 1037, 2108
MspI	CCGG	9 cut(s)	90, 150, 333, 391, 420, 873, 996, 1234, 2018
MspR9I	CCNGG	7 cut(s)	91, 916, 996, 1789, 1856, 2018, 2388
MunI	CAATTG	1 cut(s)	733
MvaI	CCWGG	4 cut(s)	916, 1789, 1856, 2388
MvnI	CGCG	2 cut(s)	441, 533
MwoI	GCNNNNNNNGC	5 cut(s)	374, 516, 848, 2105, 2169
NciI	CCSGG	3 cut(s)	91, 996, 2018
NcoI	CCATGG	1 cut(s)	182
NdeI	CATATG	1 cut(s)	69
NlaIV	GGNNCC	7 cut(s)	395, 1121, 1570, 1618, 1744, 1745, 1802
NsbI	TGCGCA	1 cut(s)	2098
NspI	RCATGY	1 cut(s)	2120
OliI	CACNNNNGTG	2 cut(s)	1453, 1988
PaeI	GCATGC	1 cut(s)	2120
PasI	CCCWGGG	1 cut(s)	1855
PciSI	GCTCTTC	2 cut(s)	151, 1877
PdmI	GAANNNNTTC	2 cut(s)	210, 2409
PfeI	GAWTC	5 cut(s)	34, 675, 932, 1237, 2405
PflMI	CCANNNNNTGG	1 cut(s)	188
PinAI	ACCGGT	2 cut(s)	390, 419
PkrI	GCNGC	9 cut(s)	102, 232, 623, 878, 1398, 1401, 1532, 1647, 1822
PleI	GAGTC	3 cut(s)	89, 1200, 1612
PmaCI	CACGTG	2 cut(s)	1543, 1739
PmlI	CACGTG	2 cut(s)	1543, 1739
PpsI	GAGTC	3 cut(s)	89, 1200, 1612
Ppu21I	YACGTR	2 cut(s)	1543, 1739
PpuMI	RGGWCCY	1 cut(s)	1743
Psp5II	RGGWCCY	1 cut(s)	1743
Psp6I	CCWGG	4 cut(s)	914, 1787, 1854, 2386
PspCI	CACGTG	2 cut(s)	1543, 1739
PspFI	CCCAGC	2 cut(s)	364, 1276
PspGI	CCWGG	4 cut(s)	914, 1787, 1854, 2386
PspN4I	GGNNCC	7 cut(s)	395, 1121, 1570, 1618, 1744, 1745, 1802
PspPI	GGNCC	4 cut(s)	393, 1247, 1743, 2154
PspPPI	RGGWCCY	1 cut(s)	1743
PsrI	GAACNNNNNNTAC	2 cut(s)	482, 514
PsuI	RGATCY	1 cut(s)	699
PvuII	CAGCTG	2 cut(s)	233, 2108
RseI	CAYNNNNRTG	7 cut(s)	83, 722, 966, 1453, 1848, 1875, 1988
SapI	GCTCTTC	2 cut(s)	151, 1877
SaqAI	TTAA	5 cut(s)	237, 776, 822, 975, 1011
SatI	GCNGC	9 cut(s)	101, 231, 622, 877, 1397, 1400, 1531, 1646, 1821
Sau96I	GGNCC	4 cut(s)	393, 1247, 1743, 2154
SchI	GAGTC	3 cut(s)	89, 1200, 1613
ScrFI	CCNGG	7 cut(s)	91, 916, 996, 1789, 1856, 2018, 2388
SduI	GDGCHC	6 cut(s)	599, 1418, 1621, 1862, 1889, 1955
SfaNI	GCATC	5 cut(s)	457, 514, 1840, 2274, 2359
SfcI	CTRYAG	1 cut(s)	1269
SinI	GGWCC	4 cut(s)	393, 1247, 1743, 2154
SmiMI	CAYNNNNRTG	7 cut(s)	83, 722, 966, 1453, 1848, 1875, 1988
SmlI	CTYRAG	1 cut(s)	2318
SmoI	CTYRAG	1 cut(s)	2318
SphI	GCATGC	1 cut(s)	2120
Sse9I	AATT	9 cut(s)	158, 221, 262, 305, 552, 733, 920, 1806, 2250
SspMI	CTAG	3 cut(s)	767, 1302, 2012
StyD4I	CCNGG	7 cut(s)	89, 914, 994, 1787, 1854, 2016, 2386
StyI	CCWWGG	2 cut(s)	182, 1920
TaaI	ACNGT	9 cut(s)	26, 463, 892, 1187, 1336, 1874, 1987, 2047, 2383
TaiI	ACGT	4 cut(s)	635, 1545, 1741, 2307
TaqII	GACCGA	1 cut(s)	192
TasI	AATT	9 cut(s)	158, 221, 262, 305, 552, 733, 920, 1806, 2250
TatI	WGTACW	6 cut(s)	489, 756, 1089, 1545, 1694, 2061
TauI	GCSGC	6 cut(s)	103, 879, 1399, 1402, 1533, 1823
TfiI	GAWTC	5 cut(s)	34, 675, 932, 1237, 2405
Tru1I	TTAA	5 cut(s)	237, 776, 822, 975, 1011
Tru9I	TTAA	5 cut(s)	237, 776, 822, 975, 1011
TseI	GCWGC	3 cut(s)	230, 621, 1645
TspGWI	ACGGA	4 cut(s)	105, 1218, 1649, 2398
Van91I	CCANNNNNTGG	1 cut(s)	188
VpaK11BI	GGWCC	4 cut(s)	393, 1247, 1743, 2154
XapI	RAATTY	5 cut(s)	221, 262, 305, 920, 1806
XbaI	TCTAGA	1 cut(s)	2011
XceI	RCATGY	1 cut(s)	2120
XcmI	CCANNNNNNNNNTGG	2 cut(s)	599, 1785
XmnI	GAANNNNTTC	2 cut(s)	210, 2409
XspI	CTAG	3 cut(s)	767, 1302, 2012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.