Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

34441718 .. 34444325

Gene Structure 2608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G017320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGAAACCTATTTTCATTCCTCTTTACCCTTCCAGCTTGTTTCTACTGTTCGTCACCCTACTGGTGGCCGGCGAGTCCGCACCTATCTACTCTCCATCCGACGATATTACTCTCAACTGCGGCTCTTCCGGCGACACGGTCAGTAATTATGATTTTCAAACTTGGACGGGGGACATCAACTCAAAGTTTTTCCCCGAAGCAGTTGGTAGCGCATCCCAAGTCGAGAAAGCACCACCGTCGTCCTCCATGGGCAGCCAAGTGCCATTCACCACAGCTCGGCTTTCGTATTCGGAATTCACTTACGTCTTTCCCGTAAGTCCAGGCCAGAAGTTCATCCGCTTATATTTCTTCCCAGCCACGTACAACGTGGACTTCAAGTTCTTCAACCGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACAGACTTCTCAAGGACTTCAACGCTTCTCTCAGTAGTACAGTCTACGATGGCTCTGAGACGATACTTAGGGAATTCTGTGTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACATTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTCGGCAGCTCAAGGCGATGGGGCTAGTTATCTTGGCAGCAGCGATAGCAGATATTACGTCGAAAACAACACCGCTCTGGAGATGATCTACCGAATCAACGTTGGTGGCAAAGCAGTGCCTCCGAATGAAGACACCGGCATGTACCGCACCTGGAATCCAACCGACGAGTTCTACTTAGATGATCCAAGTAGAAAATTGAGCATTGTACGACCAAGATATAATACTCCACTCAATTTTGCAAGAATCCCCAACTACACGGCGCCCGAAGAGGTGTACCGAACGGCCCGGACAATGGGAGGGAACATCACCATCAACAAGAGCTACAATCTCACCTGGGGGTTCCCTGTAGATCCCGACTTTTCTTACCTGGTGAGGCTCCATTTCTGTGAGATTGTTCCGAATTTTACCTCGGTTAGAGATAGAATGTTTCAGATTTTCATAGCTAATTTAACAGCTGAACTGCATGCGGACATAATCAGATGGACTACGGAAAATGGGAAAGGAAATGGGATTCCCATATATAGGGACTACTTTGTGCCGATGCTGAATCTTAGAACCCAGAAGAAAGGTTTCGTTAATCTCTCTGTTGCACTACAAGCAAATCAAGACTATTACGATACTCAATATTTCGATGCGATCTTGAATGGGCTGGAAATCTTCAAACTCAATGATACAGACGGCAATCTCGGCGGACCCATCCCCGTGCTACCGAATATCCCGCCAAAGGTGACGTCGGAAAGCTCTAGAAAATCGAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGTTTTCAGGCGTGGAAGAAATGTTAAGGATTCCAACTCCAGCCATAGGATGACGACGTCAACCATGACCCTTAGGTCACCTTATCCATCTTATTTGTGCCGTGACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAAAACTTCGATGACACTTTAATCGTTGGAGTCGGTGGGTTTGGCCATGTCTACAAAGGATACTTCGACAATGGGGCCACCCTTGTGGCAATCAAACAGCTGAAAGCCACTTCATCGCAGGGCGCCCACGAGTTCATGACAGAAATCAAAATGCTCTCCCGATTGCGCCACCGTCATTTGGTTTCTCTTATAGGATTTTGTGCCGATCAAGGTGAGATCTTAGTCTACGATTACATGGCACATGGGACTCTCAGTGATCATTTGCACCGGACCAAGGAACCACATCTTCGCACCATCATTCATCGTGACGTAAAGAGCGCAAACATATTATTAGACGAGAAATGGGTAGCGAAGGTTTCAGATTTTGGGTTGTCAAAAAAGGGCATTATCACAATATCCAAGACCCACATTAGCACAAAGGTGAAGGGTAGTTTTGGAAATCTTGACCCTGATTACTACCGACATCAACAACTGACTGAGAAGTCTGACGTGTATTCATTCGGCGTAATGTTATGCGAGGTATTATGTGGGAGGCCAGTTGTGGCCATTGTAGATAACAATAGAGTTGGGCTAGCTGGATGGGTCAAGAAGTGTCATCATGAAGGGAAACTTGATCAAATTGTTGACCCAAATTTGAAGGGTGAAATTGCACTGCGATGCTTGCATAAATTTGCTTCCATCGCAATCAGTTGCACGGATGATAATGGGATCAATCGGCCGTCAATGGAGAATGTTGTGAGAGGGCTTCAATTTGCATTTGAAATGCAACAGAACAACGAGAATTATATTGATCACATTGAAAGGATGGTTCAAGATGAGATTGGATTGATCAAGGACAATGAAGGGTCTAGTTCTAGTGAGCGAAGCAGTGGGACGAAAGAATCCATCGAAAGGTTGACCGGGACAATCTTCTCCGAGATCATCGATCCAGTTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

827

Amino Acids

92.78

Weight (kDa)

7.59

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 427	7e-26	Malectin-like domain
Pkinase	PF00069	522 - 605	5.5e-12	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	523 - 607	1.5e-16	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	609 - 759	9.8e-18	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	611 - 761	2.9e-17	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1480, 2023
AatII	GACGTC	2 cut(s)	1352, 1466
AccB1I	GGYRCC	2 cut(s)	877, 1664
AccBSI	CCGCTC	2 cut(s)	390, 692
AccI	GTMKAC	4 cut(s)	468, 1382, 1593, 1767
AclI	AACGTT	1 cut(s)	717
AclWI	GGATC	5 cut(s)	590, 794, 962, 2258, 2462
AcoI	YGGCCR	4 cut(s)	66, 1585, 2085, 2258
AcsI	RAATTY	5 cut(s)	293, 497, 1018, 2173, 2210
AcyI	GRCGYC	4 cut(s)	878, 1349, 1463, 1665
AfaI	GTAC	5 cut(s)	362, 463, 761, 825, 893
AflIII	ACRYGT	1 cut(s)	2031
AjiI	CACGTC	1 cut(s)	2032
AjnI	CCWGG	5 cut(s)	319, 555, 767, 950, 984
AleI	CACNNNNGTG	2 cut(s)	1625, 1961
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
AluBI	AGCT	9 cut(s)	36, 275, 626, 939, 1061, 1073, 1359, 1642, 2117
AluI	AGCT	9 cut(s)	36, 275, 626, 939, 1061, 1073, 1359, 1642, 2117
Alw26I	GTCTC	1 cut(s)	476
AlwI	GGATC	5 cut(s)	590, 794, 962, 2258, 2462
AoxI	GGCC	8 cut(s)	66, 322, 900, 1585, 1617, 2075, 2085, 2258
ApeKI	GCWGC	4 cut(s)	252, 623, 654, 657
ApoI	RAATTY	5 cut(s)	293, 497, 1018, 2173, 2210
ArsI	GACNNNNNNTTYG	4 cut(s)	1334, 1364, 1366, 1396
Asp700I	GAANNNNTTC	1 cut(s)	1187
AspLEI	GCGC	5 cut(s)	212, 880, 1667, 1710, 1862
AspS9I	GGNCC	4 cut(s)	901, 1310, 1617, 1812
AsuC2I	CCSGG	2 cut(s)	904, 2443
AsuNHI	GCTAGC	1 cut(s)	2113
AvaII	GGWCC	2 cut(s)	1310, 1812
AxyI	CCTNAGG	1 cut(s)	1478
BalI	TGGCCA	2 cut(s)	1587, 2087
BanI	GGYRCC	2 cut(s)	877, 1664
BauI	CACGAG	1 cut(s)	1670
BbsI	GAAGAC	1 cut(s)	753
BbvI	GCAGC	4 cut(s)	264, 635, 666, 669
BceAI	ACGGC	6 cut(s)	891, 915, 1312, 1391, 1491, 2245
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1372, 1406
BciT130I	CCWGG	5 cut(s)	321, 557, 769, 952, 986
BciVI	GTATCC	2 cut(s)	557, 1595
BclI	TGATCA	4 cut(s)	1798, 2155, 2332, 2370
BcnI	CCSGG	2 cut(s)	904, 2443
BcoDI	GTCTC	1 cut(s)	476
BfaI	CTAG	5 cut(s)	642, 1362, 2114, 2391, 2397
BfmI	CTRYAG	2 cut(s)	424, 963
BfoI	RGCGCY	2 cut(s)	881, 1668
BfuI	GTATCC	2 cut(s)	557, 1595
BglII	AGATCT	1 cut(s)	1758
BisI	GCNGC	6 cut(s)	121, 253, 624, 655, 658, 1536
BlsI	GCNGC	6 cut(s)	122, 254, 625, 656, 659, 1537
Bme1390I	CCNGG	7 cut(s)	321, 557, 769, 904, 952, 986, 2443
Bme18I	GGWCC	2 cut(s)	1310, 1812
BmgBI	CACGTC	1 cut(s)	2032
BmgT120I	GGNCC	4 cut(s)	901, 1310, 1617, 1812
BmiI	GGNNCC	7 cut(s)	879, 959, 995, 1312, 1618, 1666, 1821
BmrFI	CCNGG	7 cut(s)	321, 557, 769, 904, 952, 986, 2443
BmsI	GCATC	4 cut(s)	221, 1149, 1240, 2189
BmtI	GCTAGC	1 cut(s)	2117
BpiI	GAAGAC	1 cut(s)	753
BpmI	CTGGAG	2 cut(s)	716, 1429
BpuEI	CTTGAG	2 cut(s)	419, 612
BpuMI	CCSGG	2 cut(s)	904, 2443
Bsa29I	ATCGAT	1 cut(s)	2466
BsaAI	YACGTR	1 cut(s)	360
BsaBI	GATNNNNATC	1 cut(s)	587
BsaHI	GRCGYC	4 cut(s)	878, 1349, 1463, 1665
BsaJI	CCNNGG	5 cut(s)	246, 556, 951, 1026, 1815
BsaWI	WCCGGW	1 cut(s)	1809
BsaXI	ACNNNNNCTCC	2 cut(s)	532, 562
Bse118I	RCCGGY	3 cut(s)	68, 416, 752
Bse1I	ACTGG	4 cut(s)	66, 1524, 2078, 2471
Bse21I	CCTNAGG	1 cut(s)	1478
Bse8I	GATNNNNATC	1 cut(s)	587
BseBI	CCWGG	5 cut(s)	321, 557, 769, 952, 986
BseCI	ATCGAT	1 cut(s)	2466
BseDI	CCNNGG	5 cut(s)	246, 556, 951, 1026, 1815
BseGI	GGATG	8 cut(s)	95, 212, 333, 1314, 1461, 2126, 2245, 2352
BseJI	GATNNNNATC	1 cut(s)	587
BseMII	CTCAG	4 cut(s)	469, 471, 1807, 2010
BseNI	ACTGG	4 cut(s)	66, 1524, 2078, 2471
BseX3I	CGGCCG	1 cut(s)	2258
BseXI	GCAGC	4 cut(s)	264, 635, 666, 669
BseYI	CCCAGC	2 cut(s)	352, 551
Bsh1285I	CGRYCG	1 cut(s)	2261
BshFI	GGCC	8 cut(s)	68, 324, 902, 1587, 1619, 2077, 2087, 2260
BshNI	GGYRCC	2 cut(s)	877, 1664
BshVI	ATCGAT	1 cut(s)	2466
BsiEI	CGRYCG	1 cut(s)	2261
BsiSI	CCGG	7 cut(s)	69, 129, 417, 753, 904, 1810, 2442
BslFI	GGGAC	5 cut(s)	185, 1157, 1801, 2428, 2458
BsmAI	GTCTC	1 cut(s)	476
BsmBI	CGTCTC	1 cut(s)	476
BsmFI	GGGAC	5 cut(s)	185, 1157, 1801, 2428, 2458
BsnI	GGCC	8 cut(s)	68, 324, 902, 1587, 1619, 2077, 2087, 2260
Bsp19I	CCATGG	1 cut(s)	246
BspANI	GGCC	8 cut(s)	68, 324, 902, 1587, 1619, 2077, 2087, 2260
BspCNI	CTCAG	4 cut(s)	468, 472, 1806, 2011
BspDI	ATCGAT	1 cut(s)	2466
BspHI	TCATGA	2 cut(s)	1677, 2140
BspLI	GGNNCC	7 cut(s)	879, 959, 995, 1312, 1618, 1666, 1821
BspOI	GCTAGC	1 cut(s)	2117
BspPI	GGATC	5 cut(s)	590, 794, 962, 2258, 2462
BspQI	GCTCTTC	1 cut(s)	130
BspT107I	GGYRCC	2 cut(s)	877, 1664
BsrBI	CCGCTC	2 cut(s)	390, 692
BsrFI	RCCGGY	3 cut(s)	68, 416, 752
BsrI	ACTGG	4 cut(s)	66, 1524, 2078, 2471
BssAI	RCCGGY	3 cut(s)	68, 416, 752
BssECI	CCNNGG	5 cut(s)	246, 556, 951, 1026, 1815
BssNI	GRCGYC	4 cut(s)	878, 1349, 1463, 1665
BssSI	CACGAG	1 cut(s)	1670
BssT1I	CCWWGG	2 cut(s)	246, 1815
Bst2BI	CACGAG	1 cut(s)	1670
Bst2UI	CCWGG	5 cut(s)	321, 557, 769, 952, 986
Bst4CI	ACNGT	5 cut(s)	48, 139, 237, 466, 1715
Bst6I	CTCTTC	2 cut(s)	130, 879
BstACI	GRCGYC	4 cut(s)	878, 1349, 1463, 1665
BstBAI	YACGTR	1 cut(s)	360
BstC8I	GCNNGC	5 cut(s)	70, 1083, 1395, 2115, 2204
BstDEI	CTNAG	9 cut(s)	455, 480, 491, 793, 1169, 1478, 1762, 1793, 2019
BstDSI	CCRYGG	1 cut(s)	246
BstEII	GGTNACC	1 cut(s)	1482
BstF5I	GGATG	8 cut(s)	95, 212, 333, 1314, 1461, 2126, 2245, 2352
BstH2I	RGCGCY	2 cut(s)	881, 1668
BstHHI	GCGC	5 cut(s)	212, 880, 1667, 1710, 1862
BstMAI	GTCTC	1 cut(s)	476
BstMCI	CGRYCG	1 cut(s)	2261
BstMWI	GCNNNNNNNGC	9 cut(s)	129, 523, 663, 762, 1214, 1305, 1403, 2203, 2222
BstNI	CCWGG	5 cut(s)	321, 557, 769, 952, 986
BstNSI	RCATGY	2 cut(s)	760, 1085
BstPI	GGTNACC	1 cut(s)	1482
BstSCI	CCNGG	7 cut(s)	319, 555, 767, 902, 950, 984, 2441
BstSFI	CTRYAG	2 cut(s)	424, 963
BstV1I	GCAGC	4 cut(s)	264, 635, 666, 669
BstV2I	GAAGAC	1 cut(s)	753
BstX2I	RGATCY	2 cut(s)	967, 1758
BstXI	CCANNNNNNTGG	1 cut(s)	1627
BstYI	RGATCY	2 cut(s)	967, 1758
BstZI	CGGCCG	1 cut(s)	2258
Bsu15I	ATCGAT	1 cut(s)	2466
Bsu36I	CCTNAGG	1 cut(s)	1478
BsuI	GTATCC	2 cut(s)	557, 1595
BsuRI	GGCC	8 cut(s)	68, 324, 902, 1587, 1619, 2077, 2087, 2260
BsuTUI	ATCGAT	1 cut(s)	2466
BtgI	CCRYGG	1 cut(s)	246
BtgZI	GCGATG	4 cut(s)	648, 1641, 2206, 2212
BtrI	CACGTC	1 cut(s)	2032
BtsCI	GGATG	8 cut(s)	95, 212, 333, 1314, 1461, 2126, 2245, 2352
BtsI	GCAGTG	3 cut(s)	738, 2192, 2416
BtsIMutI	CAGTG	5 cut(s)	738, 1517, 1801, 2192, 2416
Cac8I	GCNNGC	5 cut(s)	70, 1083, 1395, 2115, 2204
CciI	TCATGA	2 cut(s)	1677, 2140
CfoI	GCGC	5 cut(s)	212, 880, 1667, 1710, 1862
Cfr10I	RCCGGY	3 cut(s)	68, 416, 752
Cfr13I	GGNCC	4 cut(s)	901, 1310, 1617, 1812
ClaI	ATCGAT	1 cut(s)	2466
CsiI	ACCWGGT	1 cut(s)	984
Csp6I	GTAC	5 cut(s)	361, 462, 760, 824, 892
CspCI	CAANNNNNGTGG	4 cut(s)	400, 435, 703, 738
CviQI	GTAC	5 cut(s)	361, 462, 760, 824, 892
DdeI	CTNAG	9 cut(s)	455, 480, 491, 793, 1169, 1478, 1762, 1793, 2019
DinI	GGCGCC	2 cut(s)	879, 1666
DrdI	GACNNNNNNGTC	2 cut(s)	1480, 2023
DseDI	GACNNNNNNGTC	2 cut(s)	1480, 2023
EaeI	YGGCCR	4 cut(s)	66, 1585, 2085, 2258
EagI	CGGCCG	1 cut(s)	2258
Eam1104I	CTCTTC	2 cut(s)	130, 879
EarI	CTCTTC	2 cut(s)	130, 879
EciI	GGCGGA	1 cut(s)	1323
EclXI	CGGCCG	1 cut(s)	2258
Eco130I	CCWWGG	2 cut(s)	246, 1815
Eco47I	GGWCC	2 cut(s)	1310, 1812
Eco52I	CGGCCG	1 cut(s)	2258
Eco81I	CCTNAGG	1 cut(s)	1478
Eco91I	GGTNACC	1 cut(s)	1482
EcoO65I	GGTNACC	1 cut(s)	1482
EcoRI	GAATTC	2 cut(s)	293, 497
EcoRII	CCWGG	5 cut(s)	319, 555, 767, 950, 984
EcoT14I	CCWWGG	2 cut(s)	246, 1815
EgeI	GGCGCC	2 cut(s)	879, 1666
EheI	GGCGCC	2 cut(s)	879, 1666
ErhI	CCWWGG	2 cut(s)	246, 1815
Esp3I	CGTCTC	1 cut(s)	476
FalI	AAGNNNNNCTT	2 cut(s)	2136, 2168
FaqI	GGGAC	5 cut(s)	185, 1157, 1801, 2428, 2458
FauI	CCCGC	1 cut(s)	1344
FbaI	TGATCA	4 cut(s)	1798, 2155, 2332, 2370
FblI	GTMKAC	4 cut(s)	468, 1382, 1593, 1767
Fnu4HI	GCNGC	6 cut(s)	121, 253, 624, 655, 658, 1536
FokI	GGATG	8 cut(s)	82, 199, 320, 1301, 1468, 2133, 2252, 2359
Fsp4HI	GCNGC	6 cut(s)	121, 253, 624, 655, 658, 1536
FspBI	CTAG	5 cut(s)	642, 1362, 2114, 2391, 2397
GlaI	GCGC	5 cut(s)	211, 879, 1666, 1709, 1861
GluI	GCNGC	6 cut(s)	121, 253, 624, 655, 658, 1536
GsaI	CCCAGC	2 cut(s)	356, 555
GsuI	CTGGAG	2 cut(s)	716, 1429
HaeII	RGCGCY	2 cut(s)	881, 1668
HaeIII	GGCC	8 cut(s)	68, 324, 902, 1587, 1619, 2077, 2087, 2260
HapII	CCGG	7 cut(s)	69, 129, 417, 753, 904, 1810, 2442
HhaI	GCGC	5 cut(s)	212, 880, 1667, 1710, 1862
Hin1I	GRCGYC	4 cut(s)	878, 1349, 1463, 1665
Hin6I	GCGC	5 cut(s)	210, 878, 1665, 1708, 1860
HinP1I	GCGC	5 cut(s)	210, 878, 1665, 1708, 1860
HincII	GTYRAC	5 cut(s)	508, 1383, 1467, 2167, 2439
HindII	GTYRAC	5 cut(s)	508, 1383, 1467, 2167, 2439
HpaII	CCGG	7 cut(s)	69, 129, 417, 753, 904, 1810, 2442
Hpy99I	CGWCG	6 cut(s)	104, 241, 680, 785, 1354, 1465
HpyAV	CCTTC	6 cut(s)	39, 1888, 1960, 2138, 2173, 2378
HpyCH4III	ACNGT	5 cut(s)	48, 139, 237, 466, 1715
HpyCH4IV	ACGT	9 cut(s)	303, 359, 366, 675, 717, 1349, 1463, 1851, 2031
HpyCH4V	TGCA	9 cut(s)	857, 1081, 1208, 1807, 2192, 2206, 2235, 2297, 2308
HpyF10VI	GCNNNNNNNGC	9 cut(s)	129, 523, 663, 762, 1214, 1305, 1403, 2203, 2222
HpyF3I	CTNAG	9 cut(s)	455, 480, 491, 793, 1169, 1478, 1762, 1793, 2019
HpySE526I	ACGT	9 cut(s)	303, 359, 366, 675, 717, 1349, 1463, 1851, 2031
Hsp92I	GRCGYC	4 cut(s)	878, 1349, 1463, 1665
HspAI	GCGC	5 cut(s)	210, 878, 1665, 1708, 1860
KasI	GGCGCC	2 cut(s)	877, 1664
KroI	GCCGGC	1 cut(s)	68
KroNI	GCCGGC	1 cut(s)	70
Ksp22I	TGATCA	4 cut(s)	1798, 2155, 2332, 2370
LguI	GCTCTTC	1 cut(s)	130
LmnI	GCTCC	1 cut(s)	999
Lsp1109I	GCAGC	4 cut(s)	264, 635, 666, 669
LweI	GCATC	4 cut(s)	221, 1149, 1240, 2189
MabI	ACCWGGT	1 cut(s)	984
MaeI	CTAG	5 cut(s)	642, 1362, 2114, 2391, 2397
MaeII	ACGT	9 cut(s)	303, 359, 366, 675, 717, 1349, 1463, 1851, 2031
MaeIII	GTNAC	5 cut(s)	52, 1345, 1482, 1508, 1847
MbiI	CCGCTC	2 cut(s)	390, 692
MflI	RGATCY	2 cut(s)	967, 1758
MlsI	TGGCCA	2 cut(s)	1587, 2087
MluNI	TGGCCA	2 cut(s)	1587, 2087
Mly113I	GGCGCC	2 cut(s)	878, 1665
MlyI	GAGTC	5 cut(s)	83, 538, 1378, 1581, 1783
MmeI	TCCRAC	5 cut(s)	123, 800, 1332, 1464, 1549
Mox20I	TGGCCA	2 cut(s)	1587, 2087
MroNI	GCCGGC	1 cut(s)	68
MroXI	GAANNNNTTC	1 cut(s)	1187
MscI	TGGCCA	2 cut(s)	1587, 2087
MseI	TTAA	5 cut(s)	576, 1067, 1194, 1431, 1562
MslI	CAYNNNNRTG	7 cut(s)	596, 755, 1002, 1319, 1625, 1961, 2197
Msp20I	TGGCCA	2 cut(s)	1587, 2087
MspA1I	CMGCKG	3 cut(s)	526, 1073, 1642
MspI	CCGG	7 cut(s)	69, 129, 417, 753, 904, 1810, 2442
MspR9I	CCNGG	7 cut(s)	321, 557, 769, 904, 952, 986, 2443
MvaI	CCWGG	5 cut(s)	321, 557, 769, 952, 986
MwoI	GCNNNNNNNGC	9 cut(s)	129, 523, 663, 762, 1214, 1305, 1403, 2203, 2222
NaeI	GCCGGC	1 cut(s)	70
NarI	GGCGCC	2 cut(s)	878, 1665
NciI	CCSGG	2 cut(s)	904, 2443
NcoI	CCATGG	1 cut(s)	246
NgoMIV	GCCGGC	1 cut(s)	68
NheI	GCTAGC	1 cut(s)	2113
NlaIV	GGNNCC	7 cut(s)	879, 959, 995, 1312, 1618, 1666, 1821
NmeAIII	GCCGAG	3 cut(s)	256, 599, 1284
NmuCI	GTSAC	5 cut(s)	52, 1345, 1482, 1508, 1847
NspI	RCATGY	2 cut(s)	760, 1085
OliI	CACNNNNGTG	2 cut(s)	1625, 1961
PaeI	GCATGC	1 cut(s)	1085
PagI	TCATGA	2 cut(s)	1677, 2140
PciSI	GCTCTTC	1 cut(s)	130
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PdiI	GCCGGC	1 cut(s)	70
PdmI	GAANNNNTTC	1 cut(s)	1187
PfeI	GAWTC	7 cut(s)	711, 772, 861, 1129, 1165, 1436, 2423
PflFI	GACNNNGTC	2 cut(s)	137, 1462
PkrI	GCNGC	6 cut(s)	122, 254, 625, 656, 659, 1537
PleI	GAGTC	5 cut(s)	82, 537, 1378, 1580, 1783
PluTI	GGCGCC	2 cut(s)	881, 1668
PpsI	GAGTC	5 cut(s)	82, 537, 1378, 1580, 1783
Ppu21I	YACGTR	1 cut(s)	360
Psp1406I	AACGTT	1 cut(s)	717
Psp6I	CCWGG	5 cut(s)	319, 555, 767, 950, 984
PspEI	GGTNACC	1 cut(s)	1482
PspFI	CCCAGC	2 cut(s)	352, 551
PspGI	CCWGG	5 cut(s)	319, 555, 767, 950, 984
PspN4I	GGNNCC	7 cut(s)	879, 959, 995, 1312, 1618, 1666, 1821
PspPI	GGNCC	4 cut(s)	901, 1310, 1617, 1812
PsuI	RGATCY	2 cut(s)	967, 1758
PsyI	GACNNNGTC	2 cut(s)	137, 1462
PvuII	CAGCTG	2 cut(s)	1073, 1642
RsaI	GTAC	5 cut(s)	362, 463, 761, 825, 893
RsaNI	GTAC	5 cut(s)	361, 462, 760, 824, 892
RseI	CAYNNNNRTG	7 cut(s)	596, 755, 1002, 1319, 1625, 1961, 2197
SalI	GTCGAC	1 cut(s)	1381
SapI	GCTCTTC	1 cut(s)	130
SaqAI	TTAA	5 cut(s)	576, 1067, 1194, 1431, 1562
SatI	GCNGC	6 cut(s)	121, 253, 624, 655, 658, 1536
Sau96I	GGNCC	4 cut(s)	901, 1310, 1617, 1812
SchI	GAGTC	5 cut(s)	83, 538, 1378, 1581, 1783
ScrFI	CCNGG	7 cut(s)	321, 557, 769, 904, 952, 986, 2443
SexAI	ACCWGGT	1 cut(s)	984
SfaNI	GCATC	4 cut(s)	221, 1149, 1240, 2189
SfcI	CTRYAG	2 cut(s)	424, 963
SfoI	GGCGCC	2 cut(s)	879, 1666
SinI	GGWCC	2 cut(s)	1310, 1812
SmiMI	CAYNNNNRTG	7 cut(s)	596, 755, 1002, 1319, 1625, 1961, 2197
SmlI	CTYRAG	2 cut(s)	434, 627
SmoI	CTYRAG	2 cut(s)	434, 627
SphI	GCATGC	1 cut(s)	1085
SspDI	GGCGCC	2 cut(s)	877, 1664
SspI	AATATT	1 cut(s)	1244
SspMI	CTAG	5 cut(s)	642, 1362, 2114, 2391, 2397
StyD4I	CCNGG	7 cut(s)	319, 555, 767, 902, 950, 984, 2441
StyI	CCWWGG	2 cut(s)	246, 1815
TaaI	ACNGT	5 cut(s)	48, 139, 237, 466, 1715
TaiI	ACGT	9 cut(s)	306, 362, 369, 678, 720, 1352, 1466, 1854, 2034
TatI	WGTACW	1 cut(s)	461
TauI	GCSGC	2 cut(s)	123, 1538
TfiI	GAWTC	7 cut(s)	711, 772, 861, 1129, 1165, 1436, 2423
Tru1I	TTAA	5 cut(s)	576, 1067, 1194, 1431, 1562
Tru9I	TTAA	5 cut(s)	576, 1067, 1194, 1431, 1562
TscAI	CASTG	5 cut(s)	738, 1524, 1801, 2199, 2416
TseFI	GTSAC	5 cut(s)	52, 1345, 1482, 1508, 1847
TseI	GCWGC	4 cut(s)	252, 623, 654, 657
Tsp45I	GTSAC	5 cut(s)	52, 1345, 1482, 1508, 1847
TspGWI	ACGGA	2 cut(s)	1121, 2252
TspRI	CASTG	5 cut(s)	738, 1524, 1801, 2199, 2416
Tth111I	GACNNNGTC	2 cut(s)	137, 1462
VpaK11BI	GGWCC	2 cut(s)	1310, 1812
XapI	RAATTY	5 cut(s)	293, 497, 1018, 2173, 2210
XbaI	TCTAGA	1 cut(s)	1361
XceI	RCATGY	2 cut(s)	760, 1085
XcmI	CCANNNNNNNNNTGG	1 cut(s)	364
XmiI	GTMKAC	4 cut(s)	468, 1382, 1593, 1767
XmnI	GAANNNNTTC	1 cut(s)	1187
XspI	CTAG	5 cut(s)	642, 1362, 2114, 2391, 2397
ZraI	GACGTC	2 cut(s)	1350, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.