Rmu_sc0042715.1_g000001

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0042715.1
Physical Location & Seq
Forward (+)
1 .. 661
661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0042715.1_g000001.1.cds

Sequence Viewer

Length: 661 bp
ccgtggattgcaatacctccacagtggtgcgcagggcaccatcatacaccgtgatgtaaagagcacaaacatcttattggacgacaaatgggtggccaaagtttcagattttgggttgtccaagggcacgactaacatgtccaaatctcacatcagcacggtggtgaaaggtagttttgggtatctggacccagagtactaccgccgacaacgtttgactgagaagtcagacgtgtactcacttggtgtagtgttgtttgaggtattgtgtgcaaggccagcagtgatgcaggcagaagagctgaagcaagtgagcctggctgagtgggccaagagctgtcatcagaatggggaaattgatcaaatcattgatccaagtttaagaggtaagatcggagccgagtgcctgaataagttcaccgaaatagctatcagttgcatgcatgacaatggaacagaacggccgtccatgactgatgttgttagggggcttgaacttgcattgcagcttcagcaatgtgcagaagggaataccaactgcactgaaaggattgttgaaactgaaccaagcagtaatgagcaaagacttgccaccaacgattccattaaatgtatatcagcaactatcttctctgagataaacgacccaagtgggcgatga

Protein Analysis

219

Amino Acids

24.26

Weight (kDa)

5.6

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 137, 224
Acc16I TGCGCA 1 cut(s) 31
AccB1I GGYRCC 1 cut(s) 36
AciI CCGC 1 cut(s) 203
AclI AACGTT 1 cut(s) 212
AclWI GGATC 1 cut(s) 366
AcoI YGGCCR 2 cut(s) 94, 462
AcuI CTGAAG 2 cut(s) 324, 495
AdeI CACNNNGTG 1 cut(s) 246
AfaI GTAC 2 cut(s) 198, 237
AflIII ACRYGT 2 cut(s) 136, 232
AgsI TTSAA 2 cut(s) 495, 558
AjiI CACGTC 1 cut(s) 233
AjnI CCWGG 1 cut(s) 316
AleI CACNNNNGTG 2 cut(s) 25, 162
AluBI AGCT 4 cut(s) 302, 337, 429, 509
AluI AGCT 4 cut(s) 302, 337, 429, 509
Alw21I GWGCWC 1 cut(s) 66
AlwI GGATC 1 cut(s) 366
AoxI GGCC 4 cut(s) 94, 276, 328, 462
ApeKI GCWGC 1 cut(s) 506
Asp700I GAANNNNTTC 1 cut(s) 414
AspLEI GCGC 1 cut(s) 32
AspS9I GGNCC 2 cut(s) 188, 328
AsuHPI GGTGA 2 cut(s) 176, 410
AvaII GGWCC 1 cut(s) 188
BaeGI GKGCMC 2 cut(s) 39, 129
BalI TGGCCA 1 cut(s) 96
BanI GGYRCC 1 cut(s) 36
Bbv12I GWGCWC 1 cut(s) 66
BbvI GCAGC 1 cut(s) 518
BccI CCATC 1 cut(s) 48
BceAI ACGGC 2 cut(s) 449, 477
BciT130I CCWGG 1 cut(s) 318
BclI TGATCA 1 cut(s) 359
BisI GCNGC 1 cut(s) 507
BlsI GCNGC 1 cut(s) 508
BmcAI AGTACT 1 cut(s) 198
Bme1390I CCNGG 1 cut(s) 318
Bme18I GGWCC 1 cut(s) 188
BmgBI CACGTC 1 cut(s) 233
BmgT120I GGNCC 2 cut(s) 188, 328
BmiI GGNNCC 3 cut(s) 38, 190, 398
BmrFI CCNGG 1 cut(s) 318
BmsI GCATC 1 cut(s) 277
BsaJI CCNNGG 2 cut(s) 2, 121
Bse3DI GCAATG 2 cut(s) 501, 522
BseBI CCWGG 1 cut(s) 318
BseDI CCNNGG 2 cut(s) 2, 121
BseMI GCAATG 2 cut(s) 501, 522
BseMII CTCAG 3 cut(s) 211, 313, 625
BseSI GKGCMC 2 cut(s) 39, 129
BseX3I CGGCCG 1 cut(s) 462
BseXI GCAGC 1 cut(s) 518
BsgI GTGCAG 2 cut(s) 524, 541
Bsh1285I CGRYCG 1 cut(s) 465
BshFI GGCC 4 cut(s) 96, 278, 330, 464
BshNI GGYRCC 1 cut(s) 36
BsiEI CGRYCG 1 cut(s) 465
BsiHKAI GWGCWC 1 cut(s) 66
BsnI GGCC 4 cut(s) 96, 278, 330, 464
Bsp1286I GDGCHC 3 cut(s) 39, 66, 129
Bsp143I GATC 3 cut(s) 359, 371, 391
BspACI CCGC 1 cut(s) 203
BspANI GGCC 4 cut(s) 96, 278, 330, 464
BspCNI CTCAG 3 cut(s) 212, 314, 626
BspLI GGNNCC 3 cut(s) 38, 190, 398
BspPI GGATC 1 cut(s) 366
BspQI GCTCTTC 1 cut(s) 292
BspT107I GGYRCC 1 cut(s) 36
BsrDI GCAATG 2 cut(s) 501, 522
BssECI CCNNGG 2 cut(s) 2, 121
BssMI GATC 3 cut(s) 359, 371, 391
BssT1I CCWWGG 1 cut(s) 121
Bst2UI CCWGG 1 cut(s) 318
Bst4CI ACNGT 3 cut(s) 24, 51, 161
Bst6I CTCTTC 1 cut(s) 292
BstC8I GCNNGC 3 cut(s) 280, 292, 441
BstDEI CTNAG 3 cut(s) 220, 322, 634
BstDSI CCRYGG 1 cut(s) 2
BstHHI GCGC 1 cut(s) 32
BstKTI GATC 3 cut(s) 362, 374, 394
BstMBI GATC 3 cut(s) 359, 371, 391
BstMCI CGRYCG 1 cut(s) 465
BstMWI GCNNNNNNNGC 3 cut(s) 279, 327, 512
BstNI CCWGG 1 cut(s) 318
BstNSI RCATGY 2 cut(s) 140, 443
BstSCI CCNGG 1 cut(s) 316
BstSLI GKGCMC 2 cut(s) 39, 129
BstV1I GCAGC 1 cut(s) 518
BstZI CGGCCG 1 cut(s) 462
BsuRI GGCC 4 cut(s) 96, 278, 330, 464
BtgI CCRYGG 1 cut(s) 2
BtrI CACGTC 1 cut(s) 233
BtsI GCAGTG 1 cut(s) 289
BtsIMutI CAGTG 3 cut(s) 29, 289, 541
Cac8I GCNNGC 3 cut(s) 280, 292, 441
CfoI GCGC 1 cut(s) 32
Cfr13I GGNCC 2 cut(s) 188, 328
Csp6I GTAC 2 cut(s) 197, 236
CviAII CATG 4 cut(s) 137, 440, 444, 470
CviQI GTAC 2 cut(s) 197, 236
DdeI CTNAG 3 cut(s) 220, 322, 634
DpnI GATC 3 cut(s) 361, 373, 393
DpnII GATC 3 cut(s) 359, 371, 391
DraIII CACNNNGTG 1 cut(s) 246
DrdI GACNNNNNNGTC 2 cut(s) 137, 224
DseDI GACNNNNNNGTC 2 cut(s) 137, 224
EaeI YGGCCR 2 cut(s) 94, 462
EagI CGGCCG 1 cut(s) 462
Eam1104I CTCTTC 1 cut(s) 292
EarI CTCTTC 1 cut(s) 292
EclXI CGGCCG 1 cut(s) 462
Eco130I CCWWGG 1 cut(s) 121
Eco47I GGWCC 1 cut(s) 188
Eco52I CGGCCG 1 cut(s) 462
Eco57I CTGAAG 2 cut(s) 324, 495
EcoRII CCWGG 1 cut(s) 316
EcoT14I CCWWGG 1 cut(s) 121
EcoT22I ATGCAT 1 cut(s) 445
ErhI CCWWGG 1 cut(s) 121
FaeI CATG 4 cut(s) 140, 443, 447, 473
FaiI YATR 6 cut(s) 45, 138, 441, 445, 471, 615
FatI CATG 4 cut(s) 136, 439, 443, 469
FbaI TGATCA 1 cut(s) 359
Fnu4HI GCNGC 1 cut(s) 507
Fsp4HI GCNGC 1 cut(s) 507
FspI TGCGCA 1 cut(s) 31
GlaI GCGC 1 cut(s) 31
GluI GCNGC 1 cut(s) 507
HaeIII GGCC 4 cut(s) 96, 278, 330, 464
HhaI GCGC 1 cut(s) 32
Hin1II CATG 4 cut(s) 140, 443, 447, 473
Hin6I GCGC 1 cut(s) 30
HinP1I GCGC 1 cut(s) 30
HinfI GANTC 1 cut(s) 600
HphI GGTGA 2 cut(s) 176, 410
Hpy166II GTNNAC 2 cut(s) 236, 418
Hpy188I TCNGA 5 cut(s) 107, 230, 346, 396, 635
Hpy188III TCNNGA 1 cut(s) 186
Hpy8I GTNNAC 2 cut(s) 236, 418
HpyAV CCTTC 1 cut(s) 519
HpyCH4III ACNGT 3 cut(s) 24, 51, 161
HpyCH4IV ACGT 2 cut(s) 212, 232
HpyCH4V TGCA 9 cut(s) 11, 273, 290, 439, 443, 501, 506, 522, 541
HpyF10VI GCNNNNNNNGC 3 cut(s) 279, 327, 512
HpyF3I CTNAG 3 cut(s) 220, 322, 634
HpySE526I ACGT 2 cut(s) 212, 232
Hsp92II CATG 4 cut(s) 140, 443, 447, 473
HspAI GCGC 1 cut(s) 30
Ksp22I TGATCA 1 cut(s) 359
Kzo9I GATC 3 cut(s) 359, 371, 391
LguI GCTCTTC 1 cut(s) 292
LmnI GCTCC 1 cut(s) 396
LpnPI CCDG 8 cut(s) 18, 171, 205, 276, 292, 303, 330, 420
Lsp1109I GCAGC 1 cut(s) 518
LweI GCATC 1 cut(s) 277
MaeII ACGT 2 cut(s) 212, 232
MalI GATC 3 cut(s) 361, 373, 393
MboI GATC 3 cut(s) 359, 371, 391
MboII GAAGA 2 cut(s) 309, 620
MhlI GDGCHC 3 cut(s) 39, 66, 129
MlsI TGGCCA 1 cut(s) 96
MluCI AATT 1 cut(s) 355
MluNI TGGCCA 1 cut(s) 96
MnlI CCTC 3 cut(s) 27, 254, 378
Mox20I TGGCCA 1 cut(s) 96
Mph1103I ATGCAT 1 cut(s) 445
MroXI GAANNNNTTC 1 cut(s) 414
MscI TGGCCA 1 cut(s) 96
MseI TTAA 2 cut(s) 381, 607
MslI CAYNNNNRTG 5 cut(s) 25, 52, 162, 346, 448
Msp20I TGGCCA 1 cut(s) 96
MspR9I CCNGG 1 cut(s) 318
MvaI CCWGG 1 cut(s) 318
MwoI GCNNNNNNNGC 3 cut(s) 279, 327, 512
NdeII GATC 3 cut(s) 359, 371, 391
NlaIII CATG 4 cut(s) 140, 443, 447, 473
NlaIV GGNNCC 3 cut(s) 38, 190, 398
NmeAIII GCCGAG 1 cut(s) 425
NsbI TGCGCA 1 cut(s) 31
NsiI ATGCAT 1 cut(s) 445
NspI RCATGY 2 cut(s) 140, 443
OliI CACNNNNGTG 2 cut(s) 25, 162
PaeI GCATGC 1 cut(s) 443
PciI ACATGT 1 cut(s) 136
PciSI GCTCTTC 1 cut(s) 292
PdmI GAANNNNTTC 1 cut(s) 414
PfeI GAWTC 1 cut(s) 600
PkrI GCNGC 1 cut(s) 508
PscI ACATGT 1 cut(s) 136
Psp1406I AACGTT 1 cut(s) 212
Psp6I CCWGG 1 cut(s) 316
PspGI CCWGG 1 cut(s) 316
PspN4I GGNNCC 3 cut(s) 38, 190, 398
PspPI GGNCC 2 cut(s) 188, 328
RsaI GTAC 2 cut(s) 198, 237
RsaNI GTAC 2 cut(s) 197, 236
RseI CAYNNNNRTG 5 cut(s) 25, 52, 162, 346, 448
SapI GCTCTTC 1 cut(s) 292
SaqAI TTAA 2 cut(s) 381, 607
SatI GCNGC 1 cut(s) 507
Sau3AI GATC 3 cut(s) 359, 371, 391
Sau96I GGNCC 2 cut(s) 188, 328
ScaI AGTACT 1 cut(s) 198
ScrFI CCNGG 1 cut(s) 318
SduI GDGCHC 3 cut(s) 39, 66, 129
SfaNI GCATC 1 cut(s) 277
SinI GGWCC 1 cut(s) 188
SmiMI CAYNNNNRTG 5 cut(s) 25, 52, 162, 346, 448
SphI GCATGC 1 cut(s) 443
Sse9I AATT 1 cut(s) 355
SsiI CCGC 1 cut(s) 203
StyD4I CCNGG 1 cut(s) 316
StyI CCWWGG 1 cut(s) 121
TaaI ACNGT 3 cut(s) 24, 51, 161
TaiI ACGT 2 cut(s) 215, 235
TasI AATT 1 cut(s) 355
TatI WGTACW 2 cut(s) 196, 235
TfiI GAWTC 1 cut(s) 600
Tru1I TTAA 2 cut(s) 381, 607
Tru9I TTAA 2 cut(s) 381, 607
TscAI CASTG 3 cut(s) 29, 289, 548
TseI GCWGC 1 cut(s) 506
TspRI CASTG 3 cut(s) 29, 289, 548
VpaK11BI GGWCC 1 cut(s) 188
XceI RCATGY 2 cut(s) 140, 443
XmnI GAANNNNTTC 1 cut(s) 414
ZrmI AGTACT 1 cut(s) 198
Zsp2I ATGCAT 1 cut(s) 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.