pycom03g05100

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
3958099 .. 3959565
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g05100.1

Sequence Viewer

Length: 1467 bp
ATGCCAGTTTTCAACTTCATCACCGGTCAACAAAACGTTGTTCGAGTAACAAAGGCATCATTCCACTCATGCAACGAAGAAGAACGAATTGGCTCATCCCTCACAACTGGCCCAACAAACATCACACTCACCTCTGCAGGCGACTACTACTACATCTGCAGTTTTAGCAGTCACTGCCAGGCAGGCATGAAGCTAGCCGTCACCGTATCCAATGCTTCTCGAGAATTGCCACTGTCAAGAATAGTGCTCCTCATCTTTGGTGTAGTTTCTGGCATACTTGTTCTCTCTCCCTTCTTAGAGATTGTTTTGCCTCCTTTTCTAGAGATTTTCCATCCACGAGGAAAAGTCAAGTCCTTTAGCTCCAACCATGGCAAGAAAAAGTCAACAGAGACCCTGGGATCACCTTTATCGCCTTATCTGTGTCGTTACTTTTCATTGGCTGAGATTAAAGTCGCCACCCAAAACTTCAACGATACTTTCGTTATTGGTGTTGGCGGGTTTGGCAATGTGTACAAAGGGTGCATTGATTGTGGTGTCACTCCTGTTGCTATCAAACGGCTGAAACCGAAATCATCACAGGGGGCCCATGAGTTCAAGACGGAAATCGAGCTGCTTTCTCAACTCCGCCACCGCCATTTGGTTTCACTCATTGGTTACTGCTCCGATAATGGCGAAATGATCTTGGTTTACGATTACATGGCACACGGCACTCTCGGTGACCATTTGTATCGTACTGGTAACCTTAAACCTCTTCCTTGGGAACAACGACTCCAAATTTGTATTGGCGCAGCGCGAGGATTGCACTACCTTCACAATGGTGCCAATGGCTCCATTATTCATCGTGATATTAAGAGCACAAATATTTTATTGGATGAGAAAATGGTCGCCAAGGTTTCAGATTTCGGGTTGTCAAAAATGGGCACGACCAACACATCCAAAACACATATCAGCACCGTGGTGAAAGGTAGTTTTGGGTATCTAGACCCAGATTACTTCCGACGTCAACAACTGACTGAGAAGTCTGATGTGTACTCGTTTGGAGTGGTTTTGTGGGAGGTATTGTGTGGGAGGCCAGCTTTGCTACATACGGTGGAGACTAGGCAAATTAGCCTCGCTGAGTGGGCCAAGAGTTGTCATAGAGACGAGACACTTGACCAAATCATTGACCCAAATGTGAAGGGTCAAATTGAAGTTGAGTGCTTGAACAAGTTTGTTGAGATTGCTATAAGTTGCTTACATGATAAAGGAATCGAACGACCGTCGATGAATGATGTTGTGAGAGGCCTTGAGTTTGCACTGCAGCTTCATCAAAAGAGCATTGGAAGTAAGGGTGACAATGGAGTTGCCTTTACTAATGACCACGGCGACCAAACCAGTAGTACCGAGCAAAGTTGTTCTACCAATGAATCCAAACAACATATATCTGTGACAATCTTCTCTGAGATCAACGACACGAATGGACGATGA

Protein Analysis

489

Amino Acids

53.97

Weight (kDa)

7.6

Isoelectric Point (pI)

38.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu_bind_like PF02298 3 - 63 2.7e-12 Plastocyanin-like domain
PK_Tyr_Ser-Thr PF07714 161 - 428 3.7e-49 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 161 - 426 1.8e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1018
AatII GACGTC 1 cut(s) 1003
AccB1I GGYRCC 1 cut(s) 818
AccII CGCG 1 cut(s) 793
AciI CCGC 3 cut(s) 495, 625, 631
AclI AACGTT 1 cut(s) 36
AclWI GGATC 1 cut(s) 406
AcsI RAATTY 1 cut(s) 774
AcyI GRCGYC 1 cut(s) 1000
AfaI GTAC 4 cut(s) 512, 733, 1031, 1381
AfiI CCNNNNNNNGG 1 cut(s) 637
AgeI ACCGGT 1 cut(s) 23
AgsI TTSAA 5 cut(s) 13, 469, 595, 1190, 1204
AjnI CCWGG 2 cut(s) 177, 393
AjuI GAANNNNNNNTTGG 2 cut(s) 72, 104
AleI CACNNNNGTG 2 cut(s) 816, 956
AloI GAACNNNNNNTCC 2 cut(s) 753, 785
AluBI AGCT 5 cut(s) 193, 360, 610, 1076, 1303
AluI AGCT 5 cut(s) 193, 360, 610, 1076, 1303
Alw21I GWGCWC 2 cut(s) 249, 857
Alw26I GTCTC 4 cut(s) 383, 1088, 1134, 1139
AlwI GGATC 1 cut(s) 406
AlwNI CAGNNNCTG 1 cut(s) 174
Ama87I CYCGRG 1 cut(s) 219
AoxI GGCC 5 cut(s) 109, 582, 1070, 1122, 1282
ApaI GGGCCC 1 cut(s) 586
ApeKI GCWGC 3 cut(s) 610, 788, 1300
ApoI RAATTY 1 cut(s) 774
ArsI GACNNNNNNTTYG 2 cut(s) 759, 791
AsiGI ACCGGT 1 cut(s) 23
AspLEI GCGC 2 cut(s) 788, 793
AspS9I GGNCC 4 cut(s) 110, 582, 583, 1122
AsuHPI GGTGA 7 cut(s) 13, 121, 193, 393, 728, 970, 1343
AsuNHI GCTAGC 1 cut(s) 193
AvaI CYCGRG 1 cut(s) 219
BaeGI GKGCMC 2 cut(s) 586, 923
BaeI ACNNNNGTAYC 2 cut(s) 465, 498
BanI GGYRCC 1 cut(s) 818
BanII GRGCYC 1 cut(s) 586
BauI CACGAG 1 cut(s) 336
Bbv12I GWGCWC 2 cut(s) 249, 857
BbvI GCAGC 3 cut(s) 597, 800, 1312
BccI CCATC 1 cut(s) 339
BceAI ACGGC 4 cut(s) 182, 572, 721, 1378
BciT130I CCWGG 2 cut(s) 179, 395
BciVI GTATCC 1 cut(s) 217
BcoDI GTCTC 4 cut(s) 383, 1088, 1134, 1139
BfaI CTAG 4 cut(s) 194, 320, 980, 1098
BfmI CTRYAG 3 cut(s) 135, 157, 1298
BfuI GTATCC 1 cut(s) 217
BglI GCCNNNNNGGC 1 cut(s) 183
BisI GCNGC 3 cut(s) 611, 789, 1301
BlsI GCNGC 3 cut(s) 612, 790, 1302
Bme1390I CCNGG 2 cut(s) 179, 395
BmeT110I CYCGRG 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 110, 582, 583, 1122
BmiI GGNNCC 4 cut(s) 583, 584, 820, 829
BmrFI CCNGG 2 cut(s) 179, 395
BmsI GCATC 1 cut(s) 65
BmtI GCTAGC 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 1307
BsaHI GRCGYC 1 cut(s) 1000
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 7 cut(s) 367, 393, 394, 755, 888, 954, 1360
BsaWI WCCGGW 1 cut(s) 23
BsaXI ACNNNNNCTCC 4 cut(s) 753, 783, 1046, 1076
Bsc4I CCNNNNNNNGG 1 cut(s) 637
Bse118I RCCGGY 1 cut(s) 23
Bse1I ACTGG 4 cut(s) 5, 112, 739, 1374
Bse3DI GCAATG 1 cut(s) 511
BseBI CCWGG 2 cut(s) 179, 395
BseDI CCNNGG 7 cut(s) 367, 393, 394, 755, 888, 954, 1360
BseGI GGATG 4 cut(s) 95, 331, 877, 932
BseLI CCNNNNNNNGG 1 cut(s) 637
BseMI GCAATG 1 cut(s) 511
BseMII CTCAG 4 cut(s) 432, 1005, 1107, 1431
BseNI ACTGG 4 cut(s) 5, 112, 739, 1374
BseRI GAGGAG 1 cut(s) 239
BseSI GKGCMC 2 cut(s) 586, 923
BseXI GCAGC 3 cut(s) 597, 800, 1312
Bsh1236I CGCG 1 cut(s) 793
Bsh1285I CGRYCG 1 cut(s) 1259
BshFI GGCC 5 cut(s) 111, 584, 1072, 1124, 1284
BshNI GGYRCC 1 cut(s) 818
BshTI ACCGGT 1 cut(s) 23
BsiEI CGRYCG 1 cut(s) 1259
BsiHKAI GWGCWC 2 cut(s) 249, 857
BsiHKCI CYCGRG 1 cut(s) 219
BsiSI CCGG 1 cut(s) 24
BslI CCNNNNNNNGG 1 cut(s) 637
BsmAI GTCTC 4 cut(s) 383, 1088, 1134, 1139
BsmBI CGTCTC 1 cut(s) 1134
BsnI GGCC 5 cut(s) 111, 584, 1072, 1124, 1284
Bso31I GGTCTC 1 cut(s) 383
BsoBI CYCGRG 1 cut(s) 219
Bsp120I GGGCCC 1 cut(s) 582
Bsp1286I GDGCHC 4 cut(s) 249, 586, 857, 923
Bsp1407I TGTACA 1 cut(s) 510
Bsp143I GATC 3 cut(s) 398, 678, 1443
Bsp19I CCATGG 1 cut(s) 367
BspACI CCGC 3 cut(s) 495, 625, 631
BspANI GGCC 5 cut(s) 111, 584, 1072, 1124, 1284
BspCNI CTCAG 4 cut(s) 433, 1006, 1108, 1432
BspFNI CGCG 1 cut(s) 793
BspLI GGNNCC 4 cut(s) 583, 584, 820, 829
BspMAI CTGCAG 3 cut(s) 139, 161, 1302
BspOI GCTAGC 1 cut(s) 197
BspPI GGATC 1 cut(s) 406
BspT107I GGYRCC 1 cut(s) 818
BspTNI GGTCTC 1 cut(s) 383
BsrDI GCAATG 1 cut(s) 511
BsrFI RCCGGY 1 cut(s) 23
BsrGI TGTACA 1 cut(s) 510
BsrI ACTGG 4 cut(s) 5, 112, 739, 1374
BssAI RCCGGY 1 cut(s) 23
BssECI CCNNGG 7 cut(s) 367, 393, 394, 755, 888, 954, 1360
BssMI GATC 3 cut(s) 398, 678, 1443
BssNI GRCGYC 1 cut(s) 1000
BssSI CACGAG 1 cut(s) 336
BssT1I CCWWGG 3 cut(s) 367, 755, 888
Bst2BI CACGAG 1 cut(s) 336
Bst2UI CCWGG 2 cut(s) 179, 395
Bst4CI ACNGT 5 cut(s) 205, 234, 955, 1090, 1260
Bst6I CTCTTC 1 cut(s) 756
BstACI GRCGYC 1 cut(s) 1000
BstAPI GCANNNNNTGC 1 cut(s) 174
BstAUI TGTACA 1 cut(s) 510
BstC8I GCNNGC 4 cut(s) 139, 184, 195, 1074
BstDEI CTNAG 5 cut(s) 295, 441, 1014, 1116, 1440
BstDSI CCRYGG 3 cut(s) 367, 954, 1360
BstEII GGTNACC 2 cut(s) 716, 737
BstF5I GGATG 4 cut(s) 95, 331, 877, 932
BstFNI CGCG 1 cut(s) 793
BstHHI GCGC 2 cut(s) 788, 793
BstKTI GATC 3 cut(s) 401, 681, 1446
BstMAI GTCTC 4 cut(s) 383, 1088, 1134, 1139
BstMBI GATC 3 cut(s) 398, 678, 1443
BstMCI CGRYCG 1 cut(s) 1259
BstMWI GCNNNNNNNGC 7 cut(s) 165, 174, 183, 501, 799, 1078, 1121
BstNI CCWGG 2 cut(s) 179, 395
BstPI GGTNACC 2 cut(s) 716, 737
BstSCI CCNGG 2 cut(s) 177, 393
BstSFI CTRYAG 3 cut(s) 135, 157, 1298
BstSLI GKGCMC 2 cut(s) 586, 923
BstUI CGCG 1 cut(s) 793
BstV1I GCAGC 3 cut(s) 597, 800, 1312
BsuI GTATCC 1 cut(s) 217
BsuRI GGCC 5 cut(s) 111, 584, 1072, 1124, 1284
BtgI CCRYGG 3 cut(s) 367, 954, 1360
BtsCI GGATG 4 cut(s) 95, 331, 877, 932
BtsI GCAGTG 2 cut(s) 172, 1295
BtsIMutI CAGTG 3 cut(s) 172, 230, 1295
Cac8I GCNNGC 4 cut(s) 139, 184, 195, 1074
CaiI CAGNNNCTG 1 cut(s) 174
CfoI GCGC 2 cut(s) 788, 793
Cfr10I RCCGGY 1 cut(s) 23
Cfr13I GGNCC 4 cut(s) 110, 582, 583, 1122
Csp6I GTAC 4 cut(s) 511, 732, 1030, 1380
CspAI ACCGGT 1 cut(s) 23
CviAII CATG 6 cut(s) 69, 187, 368, 587, 697, 1238
CviQI GTAC 4 cut(s) 511, 732, 1030, 1380
DdeI CTNAG 5 cut(s) 295, 441, 1014, 1116, 1440
DpnI GATC 3 cut(s) 400, 680, 1445
DpnII GATC 3 cut(s) 398, 678, 1443
DrdI GACNNNNNNGTC 1 cut(s) 1018
DseDI GACNNNNNNGTC 1 cut(s) 1018
Eam1104I CTCTTC 1 cut(s) 756
EarI CTCTTC 1 cut(s) 756
EciI GGCGGA 1 cut(s) 614
Eco130I CCWWGG 3 cut(s) 367, 755, 888
Eco147I AGGCCT 1 cut(s) 1284
Eco24I GRGCYC 1 cut(s) 586
Eco31I GGTCTC 1 cut(s) 383
Eco88I CYCGRG 1 cut(s) 219
Eco91I GGTNACC 2 cut(s) 716, 737
EcoO109I RGGNCCY 1 cut(s) 582
EcoO65I GGTNACC 2 cut(s) 716, 737
EcoRII CCWGG 2 cut(s) 177, 393
EcoT14I CCWWGG 3 cut(s) 367, 755, 888
EcoT38I GRGCYC 1 cut(s) 586
ErhI CCWWGG 3 cut(s) 367, 755, 888
Esp3I CGTCTC 1 cut(s) 1134
FaeI CATG 6 cut(s) 72, 190, 371, 590, 700, 1241
FatI CATG 6 cut(s) 68, 186, 367, 586, 696, 1237
FauI CCCGC 1 cut(s) 488
Fnu4HI GCNGC 3 cut(s) 611, 789, 1301
FokI GGATG 4 cut(s) 82, 318, 884, 919
FriOI GRGCYC 1 cut(s) 586
Fsp4HI GCNGC 3 cut(s) 611, 789, 1301
FspBI CTAG 4 cut(s) 194, 320, 980, 1098
GlaI GCGC 2 cut(s) 787, 792
GluI GCNGC 3 cut(s) 611, 789, 1301
HaeIII GGCC 5 cut(s) 111, 584, 1072, 1124, 1284
HapII CCGG 1 cut(s) 24
HhaI GCGC 2 cut(s) 788, 793
Hin1I GRCGYC 1 cut(s) 1000
Hin1II CATG 6 cut(s) 72, 190, 371, 590, 700, 1241
Hin6I GCGC 2 cut(s) 786, 791
HinP1I GCGC 2 cut(s) 786, 791
HincII GTYRAC 3 cut(s) 29, 384, 1004
HindII GTYRAC 3 cut(s) 29, 384, 1004
HinfI GANTC 3 cut(s) 768, 1248, 1406
HpaII CCGG 1 cut(s) 24
HphI GGTGA 7 cut(s) 13, 121, 193, 393, 728, 970, 1343
Hpy166II GTNNAC 6 cut(s) 29, 384, 511, 688, 1004, 1030
Hpy188I TCNGA 5 cut(s) 664, 898, 998, 1024, 1441
Hpy188III TCNNGA 7 cut(s) 219, 221, 237, 320, 595, 842, 980
Hpy8I GTNNAC 6 cut(s) 29, 384, 511, 688, 1004, 1030
Hpy99I CGWCG 2 cut(s) 1002, 1264
HpyAV CCTTC 3 cut(s) 301, 818, 1171
HpyCH4III ACNGT 5 cut(s) 205, 234, 955, 1090, 1260
HpyCH4IV ACGT 2 cut(s) 36, 1000
HpyCH4V TGCA 7 cut(s) 72, 137, 159, 522, 802, 1295, 1300
HpyF10VI GCNNNNNNNGC 7 cut(s) 165, 174, 183, 501, 799, 1078, 1121
HpyF3I CTNAG 5 cut(s) 295, 441, 1014, 1116, 1440
HpySE526I ACGT 2 cut(s) 36, 1000
Hsp92I GRCGYC 1 cut(s) 1000
Hsp92II CATG 6 cut(s) 72, 190, 371, 590, 700, 1241
HspAI GCGC 2 cut(s) 786, 791
Kzo9I GATC 3 cut(s) 398, 678, 1443
LmnI GCTCC 4 cut(s) 252, 365, 665, 833
Lsp1109I GCAGC 3 cut(s) 597, 800, 1312
LweI GCATC 1 cut(s) 65
MaeI CTAG 4 cut(s) 194, 320, 980, 1098
MaeII ACGT 2 cut(s) 36, 1000
MalI GATC 3 cut(s) 400, 680, 1445
MboI GATC 3 cut(s) 398, 678, 1443
MboII GAAGA 4 cut(s) 89, 92, 743, 1426
MhlI GDGCHC 4 cut(s) 249, 586, 857, 923
MluCI AATT 5 cut(s) 87, 224, 774, 1104, 1185
MlyI GAGTC 1 cut(s) 762
MmeI TCCRAC 2 cut(s) 387, 1021
MseI TTAA 3 cut(s) 447, 744, 849
MslI CAYNNNNRTG 2 cut(s) 816, 956
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 2 cut(s) 179, 395
MteI GCGCNGCGC 1 cut(s) 789
MvaI CCWGG 2 cut(s) 179, 395
MvnI CGCG 1 cut(s) 793
MwoI GCNNNNNNNGC 7 cut(s) 165, 174, 183, 501, 799, 1078, 1121
NcoI CCATGG 1 cut(s) 367
NdeII GATC 3 cut(s) 398, 678, 1443
NheI GCTAGC 1 cut(s) 193
NlaIII CATG 6 cut(s) 72, 190, 371, 590, 700, 1241
NlaIV GGNNCC 4 cut(s) 583, 584, 820, 829
NmuCI GTSAC 6 cut(s) 170, 199, 535, 716, 1331, 1426
OliI CACNNNNGTG 2 cut(s) 816, 956
PaeR7I CTCGAG 1 cut(s) 219
PasI CCCWGGG 1 cut(s) 394
PceI AGGCCT 1 cut(s) 1284
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PfeI GAWTC 2 cut(s) 1248, 1406
PinAI ACCGGT 1 cut(s) 23
PkrI GCNGC 3 cut(s) 612, 790, 1302
PleI GAGTC 1 cut(s) 762
PpsI GAGTC 1 cut(s) 762
Psp1406I AACGTT 1 cut(s) 36
Psp6I CCWGG 2 cut(s) 177, 393
PspEI GGTNACC 2 cut(s) 716, 737
PspGI CCWGG 2 cut(s) 177, 393
PspN4I GGNNCC 4 cut(s) 583, 584, 820, 829
PspOMI GGGCCC 1 cut(s) 582
PspPI GGNCC 4 cut(s) 110, 582, 583, 1122
PstI CTGCAG 3 cut(s) 139, 161, 1302
PstNI CAGNNNCTG 1 cut(s) 174
RsaI GTAC 4 cut(s) 512, 733, 1031, 1381
RsaNI GTAC 4 cut(s) 511, 732, 1030, 1380
RseI CAYNNNNRTG 2 cut(s) 816, 956
SaqAI TTAA 3 cut(s) 447, 744, 849
SatI GCNGC 3 cut(s) 611, 789, 1301
Sau3AI GATC 3 cut(s) 398, 678, 1443
Sau96I GGNCC 4 cut(s) 110, 582, 583, 1122
SchI GAGTC 1 cut(s) 762
ScrFI CCNGG 2 cut(s) 179, 395
SduI GDGCHC 4 cut(s) 249, 586, 857, 923
SfaNI GCATC 1 cut(s) 65
SfcI CTRYAG 3 cut(s) 135, 157, 1298
Sfr274I CTCGAG 1 cut(s) 219
SlaI CTCGAG 1 cut(s) 219
SmiMI CAYNNNNRTG 2 cut(s) 816, 956
SmlI CTYRAG 2 cut(s) 219, 1286
SmoI CTYRAG 2 cut(s) 219, 1286
Sse9I AATT 5 cut(s) 87, 224, 774, 1104, 1185
SseBI AGGCCT 1 cut(s) 1284
SsiI CCGC 3 cut(s) 495, 625, 631
SspI AATATT 1 cut(s) 862
SspMI CTAG 4 cut(s) 194, 320, 980, 1098
StuI AGGCCT 1 cut(s) 1284
StyD4I CCNGG 2 cut(s) 177, 393
StyI CCWWGG 3 cut(s) 367, 755, 888
TaaI ACNGT 5 cut(s) 205, 234, 955, 1090, 1260
TaiI ACGT 2 cut(s) 39, 1003
TaqI TCGA 5 cut(s) 43, 220, 606, 1251, 1262
TasI AATT 5 cut(s) 87, 224, 774, 1104, 1185
TatI WGTACW 2 cut(s) 510, 1029
TfiI GAWTC 2 cut(s) 1248, 1406
Tru1I TTAA 3 cut(s) 447, 744, 849
Tru9I TTAA 3 cut(s) 447, 744, 849
TscAI CASTG 3 cut(s) 179, 237, 1302
TseFI GTSAC 6 cut(s) 170, 199, 535, 716, 1331, 1426
TseI GCWGC 3 cut(s) 610, 788, 1300
Tsp45I GTSAC 6 cut(s) 170, 199, 535, 716, 1331, 1426
TspDTI ATGAA 7 cut(s) 7, 203, 423, 827, 1280, 1295, 1419
TspGWI ACGGA 1 cut(s) 614
TspRI CASTG 3 cut(s) 179, 237, 1302
XapI RAATTY 1 cut(s) 774
XbaI TCTAGA 2 cut(s) 319, 979
XcmI CCANNNNNNNNNTGG 1 cut(s) 779
XhoI CTCGAG 1 cut(s) 219
XspI CTAG 4 cut(s) 194, 320, 980, 1098
ZraI GACGTC 1 cut(s) 1001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.