Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

24102788 .. 24106083

Gene Structure 3296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G251000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGAAGAAGAACGTCCCAATTCTTACTACTCAACTTTACCTTTCCTTGTTTCTCCACATTATCACCGGCCTACTCGTGGCGGCTAGAGATTCACCACCTATCTACACTCCGGTGGAAGATATCACGGTTAAATGTGGCTATTCCGGCAACTTATTAAATGAATATGATGAACGACATTGGCACGGAGACATCAACTCAAACTTTTCCCCCACAACTGGCAGTGACACATCCATGTTCAGAGAAGTACCTCATTCGTACACCGTCCACCAAGTGGCTTACACCACAGCGCGCCTTTCGCGCTCTGAATTTACTTACAGTTTTAAACTCACTTCCGGCCAAAAGTTCATCCGCTTGTATTTCAACCCAGTTTCATATGGTCCTGACTTTGACCGATCTAAAGCCCTCTTCTCAGTCAAAGCCAGTGGCTTTACCCTTCTCCACGACTTCAACACTTCAGTCACTGCCGATGCGTACGGAACAGAGACGATATACAGAGAGTTCTGTCTCAACGTGGAGTCATCAGAACAGAGCTTGAACATCACCTTCACTCCGAGTCCGAGACTAGCAAGCCCAGATGCGTATGCGTTTATCAACGGCATTGAAATTGTATCCATGCCCACCAATCTTTACTTCACTGCAGCCCAAAGATTTGGGGTAGGACTCGTAGGAAACAACTTCAATTTTCACATCGAAAACAACTCTGCTCTGGAGACGGTGTACCGAATAAACGTTGGTGGAAAGTCATTATTTTTCAGTGAAGACACTGGCATGTATCGCAACTGGGGAAGCGAGCAAGAAGAGCCCAAGTACTTAGATGATTTAAGCATTGAGTTTAGTGTTTTACCACAAAACACTAGTATTGAACTCGACTTTGCCGGAATAGCAGAGTACTATGCTCCAAAAGAAGTTTACCAAACGGGCCGGTCTATGGGCATGAACAAGACCATAAACAAGAGCTATAATCTCACTTGGAATTTTCCAGTTGATCCCAAGTTTTATTACCTGGTTAGGCTTCATTTCTGCGAGTTTGAACCTGACATTGTCCAACCCAGAGACCGAAACTTTCTAATCAACATAGCCAACGTTGTCGCTGAAGAAGAAGCGGATATCATCATGTGGAGTGGCGGAAATGGGAGACCAGTGTACCGTGACTACCTTGTGTTCGTGACATGCCCTGCAACTTCAGAAAGCCAGAGGAAAGTAAATCTCTCCATAGCACTGCGAGCAAACCCTTATGATTTTATGACGAATTTCAACGATGCAATCTTGAATGGGCTCGAAATATTCAAATTAAATGACACAAATAGCAATCTCGCCGGACACAACCCAAACCCACCTCCTATGTTGACCCCAAAAAAGGCGTTGTCGCCAAGCCCAGAGAGAACCAACACCGAGTTAACGCGGACTCCTATGCTTGCCATTATCGCCGGTGTAGTTTCCACCGTCACAATTGTAATGTTTCTTGGGTTAATCTTGGTTTTCAAGCAACAACAGAAACTCAAAGACTCCTGGTACTCCAGCAACAGAACAACCAACTCATCTTTACCGTCCGCTTTGTGTCACTACTTTTCCCTGGCGAAGATTAAAGCCGCCACCCGAAACTTCAACGATATTTGTATTATTGGGCGCGGTGGGTTTGGCAATGTGTATAAAGGGTACATCGATGGTAGGGCTACTCCCGTTGCAATCAAACGGTTGAAACCCGAGTCCTCGCAAGGGGCCCACGAGTTCAAGACGGAGATCGAGATGCTCTCCCAATTACGTCACCGTCATTTGGTGTCGTTGATTGGATATTGTGTGGATGAAAGTGAGATGATCTTAGTGTATGATTTCATGGACCGTGGGACCCTTAGTGACCATCTCTACCACAAAGATAACCCATCTCTTCTCTGGGAGCAACGGCTTGAGATCTGTATCGGGGCAGCGCGTGGGCTGCATTACCTTCACACGGGAGCAATGTGCACAATCATTCACCGTGACGTGAAGAGCACCAACATCTTGTTGGAAGAGAAATGGATCGCTAAGGTTTCTGATTTCGGGTTGTCAAAAATGGGCGCCACCACCATGTCTAACGCCTACATCAGCACGGTGGTGAAGGGTAGTTTTGGGTATCTAGACCCGGAATACTATCGTCGTCAGCAGCTGAGTGTGAAGTCTGACGTGTACTCCTTCGGTGTAGTATTATGCGAGGTATTGTGTGGAAGGCCAGCAGTTATGCGTATGGTAGAGAGGAGGCAGATGAGCCTGGCTGAATGGGCCAAGACTTGTCATCGCAATGGGACACTTAATGAAATCGTTGACCCATGCTTGAAGGGCAAGGTCGCAAGCCTTTGCTTTAATAAATTCGTTGAGATTGCGATGAGTTGCATGCATGATAATGGGATTGAACGGCCGTCGATGGCTGACGTTGTGAGGGAGCTTGAATTTGCTTTGAAGCTTCAACGGAGTGCTGACGACGATATAGACTTCAATATTGTTGAAAACAATATTTGTGAAGATGAGGTTGCCTTCATCAAAGACAAGGAGGGTTCTGGTGAAAGTGAGCAAAGTTGTGCGACCGACGAATTCATTAAATTGATTTTTGAGACAATCTTCTCTGAGATCAACAATCCGGATGAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

875

Amino Acids

98.79

Weight (kDa)

5.66

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2054
AccB7I	CCANNNNNTGG	1 cut(s)	271
AccII	CGCG	5 cut(s)	289, 298, 1402, 1629, 1927
AccIII	TCCGGA	1 cut(s)	2611
AciI	CCGC	8 cut(s)	80, 349, 1103, 1125, 1402, 1551, 1590, 1629
AclI	AACGTT	2 cut(s)	729, 1083
AclWI	GGATC	2 cut(s)	980, 2024
AcoI	YGGCCR	2 cut(s)	334, 2390
AcsI	RAATTY	6 cut(s)	305, 973, 1249, 2342, 2423, 2564
AcuI	CTGAAG	3 cut(s)	438, 1113, 1167
AcyI	GRCGYC	1 cut(s)	2055
AdeI	CACNNNGTG	1 cut(s)	271
AfiI	CCNNNNNNNGG	8 cut(s)	76, 215, 271, 928, 1357, 1716, 1774, 1948
AflIII	ACRYGT	1 cut(s)	2160
AhlI	ACTAGT	1 cut(s)	854
AjiI	CACGTC	2 cut(s)	1981, 2161
AjnI	CCWGG	4 cut(s)	1002, 1508, 1572, 2244
AjuI	GAANNNNNNNTTGG	2 cut(s)	614, 646
AleI	CACNNNNGTG	2 cut(s)	110, 2090
AluBI	AGCT	5 cut(s)	531, 957, 2143, 2419, 2437
AluI	AGCT	5 cut(s)	531, 957, 2143, 2419, 2437
Alw21I	GWGCWC	2 cut(s)	1964, 1991
Alw26I	GTCTC	8 cut(s)	180, 476, 509, 553, 704, 1047, 1129, 2579
Alw44I	GTGCAC	1 cut(s)	1960
AlwI	GGATC	2 cut(s)	980, 2024
AlwNI	CAGNNNCTG	2 cut(s)	461, 2143
Ama87I	CYCGRG	1 cut(s)	1703
Aor13HI	TCCGGA	1 cut(s)	2611
AoxI	GGCC	7 cut(s)	67, 334, 919, 1719, 2204, 2256, 2390
ApaI	GGGCCC	1 cut(s)	1723
ApaLI	GTGCAC	1 cut(s)	1960
ApeKI	GCWGC	4 cut(s)	638, 1922, 1933, 2140
ApoI	RAATTY	6 cut(s)	305, 973, 1249, 2342, 2423, 2564
AspLEI	GCGC	6 cut(s)	289, 291, 300, 1629, 1927, 2057
AspS9I	GGNCC	7 cut(s)	377, 919, 1719, 1720, 1837, 1845, 2256
AsuC2I	CCSGG	1 cut(s)	2120
AsuHPI	GGTGA	7 cut(s)	55, 84, 532, 1757, 1964, 2104, 2546
AvaI	CYCGRG	1 cut(s)	1703
AvaII	GGWCC	3 cut(s)	377, 1837, 1845
BaeGI	GKGCMC	2 cut(s)	1723, 1964
BaeI	ACNNNNGTAYC	2 cut(s)	1127, 1160
BanI	GGYRCC	1 cut(s)	2054
BanII	GRGCYC	3 cut(s)	804, 1278, 1723
BauI	CACGAG	2 cut(s)	74, 1724
BbsI	GAAGAC	1 cut(s)	765
Bbv12I	GWGCWC	2 cut(s)	1964, 1991
BbvI	GCAGC	4 cut(s)	650, 1920, 1934, 2152
BccI	CCATC	4 cut(s)	1658, 1866, 1888, 2392
BceAI	ACGGC	4 cut(s)	610, 1916, 2377, 2405
BciT130I	CCWGG	4 cut(s)	1004, 1510, 1574, 2246
BciVI	GTATCC	1 cut(s)	619
BcnI	CCSGG	1 cut(s)	2120
BcoDI	GTCTC	8 cut(s)	180, 476, 509, 553, 704, 1047, 1129, 2579
BcuI	ACTAGT	1 cut(s)	854
BfaI	CTAG	4 cut(s)	84, 563, 855, 2114
BfmI	CTRYAG	1 cut(s)	636
BfoI	RGCGCY	1 cut(s)	2058
BfuI	GTATCC	1 cut(s)	619
BglII	AGATCT	1 cut(s)	1908
BisI	GCNGC	6 cut(s)	81, 639, 1590, 1923, 1934, 2141
BlsI	GCNGC	6 cut(s)	82, 640, 1591, 1924, 1935, 2142
BmcAI	AGTACT	2 cut(s)	809, 890
Bme1390I	CCNGG	5 cut(s)	1004, 1510, 1574, 2120, 2246
Bme18I	GGWCC	3 cut(s)	377, 1837, 1845
BmeT110I	CYCGRG	1 cut(s)	1703
BmgBI	CACGTC	2 cut(s)	1981, 2161
BmgT120I	GGNCC	7 cut(s)	377, 919, 1719, 1720, 1837, 1845, 2256
BmiI	GGNNCC	5 cut(s)	1720, 1721, 1846, 1847, 2056
BmrFI	CCNGG	5 cut(s)	1004, 1510, 1574, 2120, 2246
BmrI	ACTGGG	2 cut(s)	359, 790
BmsI	GCATC	4 cut(s)	457, 565, 1249, 1737
BmuI	ACTGGG	2 cut(s)	359, 790
BpiI	GAAGAC	1 cut(s)	765
BplI	GAGNNNNNCTC	2 cut(s)	1736, 1768
BpmI	CTGGAG	2 cut(s)	728, 1501
Bpu10I	CCTNAGC	1 cut(s)	2022
BpuEI	CTTGAG	1 cut(s)	1925
BpuMI	CCSGG	1 cut(s)	2120
Bsa29I	ATCGAT	1 cut(s)	1662
BsaBI	GATNNNNATC	1 cut(s)	1913
BsaHI	GRCGYC	1 cut(s)	2055
BsaI	GGTCTC	2 cut(s)	1047, 1129
BsaJI	CCNNGG	2 cut(s)	1572, 1840
BsaWI	WCCGGW	2 cut(s)	109, 2611
BsaXI	ACNNNNNCTCC	8 cut(s)	532, 562, 701, 731, 1390, 1420, 2150, 2180
Bsc4I	CCNNNNNNNGG	8 cut(s)	76, 215, 271, 928, 1357, 1716, 1774, 1948
Bse118I	RCCGGY	3 cut(s)	65, 921, 1427
Bse1I	ACTGG	7 cut(s)	220, 365, 420, 769, 785, 980, 1139
Bse3DI	GCAATG	3 cut(s)	1648, 1962, 2281
Bse8I	GATNNNNATC	1 cut(s)	1913
BseAI	TCCGGA	1 cut(s)	2611
BseBI	CCWGG	4 cut(s)	1004, 1510, 1574, 2246
BseCI	ATCGAT	1 cut(s)	1662
BseDI	CCNNGG	2 cut(s)	1572, 1840
BseGI	GGATG	4 cut(s)	227, 345, 1807, 2620
BseJI	GATNNNNATC	1 cut(s)	1913
BseLI	CCNNNNNNNGG	8 cut(s)	76, 215, 271, 928, 1357, 1716, 1774, 1948
BseMI	GCAATG	3 cut(s)	1648, 1962, 2281
BseMII	CTCAG	3 cut(s)	423, 2135, 2589
BseNI	ACTGG	7 cut(s)	220, 365, 420, 769, 785, 980, 1139
BsePI	GCGCGC	1 cut(s)	287
BseRI	GAGGAG	1 cut(s)	2245
BseSI	GKGCMC	2 cut(s)	1723, 1964
BseX3I	CGGCCG	1 cut(s)	2390
BseXI	GCAGC	4 cut(s)	650, 1920, 1934, 2152
Bsh1236I	CGCG	5 cut(s)	289, 298, 1402, 1629, 1927
Bsh1285I	CGRYCG	2 cut(s)	2393, 2559
BshFI	GGCC	7 cut(s)	69, 336, 921, 1721, 2206, 2258, 2392
BshNI	GGYRCC	1 cut(s)	2054
BshVI	ATCGAT	1 cut(s)	1662
BsiEI	CGRYCG	2 cut(s)	2393, 2559
BsiHKAI	GWGCWC	2 cut(s)	1964, 1991
BsiHKCI	CYCGRG	1 cut(s)	1703
BsiWI	CGTACG	1 cut(s)	471
BslFI	GGGAC	2 cut(s)	1858, 2293
BslI	CCNNNNNNNGG	8 cut(s)	76, 215, 271, 928, 1357, 1716, 1774, 1948
BsmAI	GTCTC	8 cut(s)	180, 476, 509, 553, 704, 1047, 1129, 2579
BsmBI	CGTCTC	2 cut(s)	476, 704
BsmFI	GGGAC	2 cut(s)	1858, 2293
BsnI	GGCC	7 cut(s)	69, 336, 921, 1721, 2206, 2258, 2392
Bso31I	GGTCTC	2 cut(s)	1047, 1129
BsoBI	CYCGRG	1 cut(s)	1703
Bsp120I	GGGCCC	1 cut(s)	1719
Bsp1286I	GDGCHC	5 cut(s)	804, 1278, 1723, 1964, 1991
Bsp13I	TCCGGA	1 cut(s)	2611
Bsp143I	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
BspACI	CCGC	8 cut(s)	80, 349, 1103, 1125, 1402, 1551, 1590, 1629
BspANI	GGCC	7 cut(s)	69, 336, 921, 1721, 2206, 2258, 2392
BspCNI	CTCAG	3 cut(s)	422, 2136, 2590
BspDI	ATCGAT	1 cut(s)	1662
BspEI	TCCGGA	1 cut(s)	2611
BspFNI	CGCG	5 cut(s)	289, 298, 1402, 1629, 1927
BspLI	GGNNCC	5 cut(s)	1720, 1721, 1846, 1847, 2056
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	2 cut(s)	980, 2024
BspQI	GCTCTTC	2 cut(s)	792, 1979
BspT107I	GGYRCC	1 cut(s)	2054
BspTNI	GGTCTC	2 cut(s)	1047, 1129
BsrDI	GCAATG	3 cut(s)	1648, 1962, 2281
BsrFI	RCCGGY	3 cut(s)	65, 921, 1427
BsrI	ACTGG	7 cut(s)	220, 365, 420, 769, 785, 980, 1139
BssAI	RCCGGY	3 cut(s)	65, 921, 1427
BssECI	CCNNGG	2 cut(s)	1572, 1840
BssHII	GCGCGC	1 cut(s)	287
BssMI	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
BssNI	GRCGYC	1 cut(s)	2055
BssSI	CACGAG	2 cut(s)	74, 1724
Bst2BI	CACGAG	2 cut(s)	74, 1724
Bst2UI	CCWGG	4 cut(s)	1004, 1510, 1574, 2246
Bst6I	CTCTTC	5 cut(s)	410, 792, 1890, 1979, 2001
BstACI	GRCGYC	1 cut(s)	2055
BstC8I	GCNNGC	8 cut(s)	289, 568, 791, 1224, 1416, 2208, 2326, 2369
BstDEI	CTNAG	7 cut(s)	409, 811, 1819, 1850, 2022, 2144, 2598
BstDSI	CCRYGG	1 cut(s)	1840
BstF5I	GGATG	4 cut(s)	227, 345, 1807, 2620
BstFNI	CGCG	5 cut(s)	289, 298, 1402, 1629, 1927
BstH2I	RGCGCY	1 cut(s)	2058
BstHHI	GCGC	6 cut(s)	289, 291, 300, 1629, 1927, 2057
BstKTI	GATC	7 cut(s)	395, 988, 1743, 1818, 1911, 2019, 2604
BstMAI	GTCTC	8 cut(s)	180, 476, 509, 553, 704, 1047, 1129, 2579
BstMBI	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
BstMCI	CGRYCG	2 cut(s)	2393, 2559
BstNI	CCWGG	4 cut(s)	1004, 1510, 1574, 2246
BstNSI	RCATGY	3 cut(s)	772, 1173, 2371
BstSCI	CCNGG	5 cut(s)	1002, 1508, 1572, 2118, 2244
BstSFI	CTRYAG	1 cut(s)	636
BstSLI	GKGCMC	2 cut(s)	1723, 1964
BstUI	CGCG	5 cut(s)	289, 298, 1402, 1629, 1927
BstV1I	GCAGC	4 cut(s)	650, 1920, 1934, 2152
BstV2I	GAAGAC	1 cut(s)	765
BstX2I	RGATCY	1 cut(s)	1908
BstXI	CCANNNNNNTGG	1 cut(s)	650
BstYI	RGATCY	1 cut(s)	1908
BstZI	CGGCCG	1 cut(s)	2390
Bsu15I	ATCGAT	1 cut(s)	1662
BsuI	GTATCC	1 cut(s)	619
BsuRI	GGCC	7 cut(s)	69, 336, 921, 1721, 2206, 2258, 2392
BsuTUI	ATCGAT	1 cut(s)	1662
BtgI	CCRYGG	1 cut(s)	1840
BtgZI	GCGATG	2 cut(s)	2255, 2372
BtrI	CACGTC	2 cut(s)	1981, 2161
BtsCI	GGATG	4 cut(s)	227, 345, 1807, 2620
BtsI	GCAGTG	4 cut(s)	226, 459, 633, 1217
BtsIMutI	CAGTG	8 cut(s)	226, 427, 459, 633, 760, 762, 1146, 1217
Cac8I	GCNNGC	8 cut(s)	289, 568, 791, 1224, 1416, 2208, 2326, 2369
CaiI	CAGNNNCTG	2 cut(s)	461, 2143
CfoI	GCGC	6 cut(s)	289, 291, 300, 1629, 1927, 2057
Cfr10I	RCCGGY	3 cut(s)	65, 921, 1427
Cfr13I	GGNCC	7 cut(s)	377, 919, 1719, 1720, 1837, 1845, 2256
ClaI	ATCGAT	1 cut(s)	1662
CsiI	ACCWGGT	1 cut(s)	1002
CspCI	CAANNNNNGTGG	2 cut(s)	403, 438
DdeI	CTNAG	7 cut(s)	409, 811, 1819, 1850, 2022, 2144, 2598
DinI	GGCGCC	1 cut(s)	2056
DpnI	GATC	7 cut(s)	394, 987, 1742, 1817, 1910, 2018, 2603
DpnII	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
DraI	TTTAAA	1 cut(s)	322
DraIII	CACNNNGTG	1 cut(s)	271
EaeI	YGGCCR	2 cut(s)	334, 2390
EagI	CGGCCG	1 cut(s)	2390
Eam1104I	CTCTTC	5 cut(s)	410, 792, 1890, 1979, 2001
EarI	CTCTTC	5 cut(s)	410, 792, 1890, 1979, 2001
EciI	GGCGGA	1 cut(s)	1140
EclXI	CGGCCG	1 cut(s)	2390
Eco24I	GRGCYC	3 cut(s)	804, 1278, 1723
Eco31I	GGTCTC	2 cut(s)	1047, 1129
Eco32I	GATATC	2 cut(s)	121, 1108
Eco47I	GGWCC	3 cut(s)	377, 1837, 1845
Eco52I	CGGCCG	1 cut(s)	2390
Eco57I	CTGAAG	3 cut(s)	438, 1113, 1167
Eco88I	CYCGRG	1 cut(s)	1703
EcoO109I	RGGNCCY	2 cut(s)	1719, 1845
EcoRI	GAATTC	1 cut(s)	2564
EcoRII	CCWGG	4 cut(s)	1002, 1508, 1572, 2244
EcoRV	GATATC	2 cut(s)	121, 1108
EcoT22I	ATGCAT	1 cut(s)	2373
EcoT38I	GRGCYC	3 cut(s)	804, 1278, 1723
EgeI	GGCGCC	1 cut(s)	2056
EheI	GGCGCC	1 cut(s)	2056
Esp3I	CGTCTC	2 cut(s)	476, 704
FaqI	GGGAC	2 cut(s)	1858, 2293
FauNDI	CATATG	1 cut(s)	373
Fnu4HI	GCNGC	6 cut(s)	81, 639, 1590, 1923, 1934, 2141
FokI	GGATG	3 cut(s)	214, 332, 1814
FriOI	GRGCYC	3 cut(s)	804, 1278, 1723
Fsp4HI	GCNGC	6 cut(s)	81, 639, 1590, 1923, 1934, 2141
FspBI	CTAG	4 cut(s)	84, 563, 855, 2114
GlaI	GCGC	6 cut(s)	288, 290, 299, 1628, 1926, 2056
GluI	GCNGC	6 cut(s)	81, 639, 1590, 1923, 1934, 2141
GsuI	CTGGAG	2 cut(s)	728, 1501
HaeII	RGCGCY	1 cut(s)	2058
HaeIII	GGCC	7 cut(s)	69, 336, 921, 1721, 2206, 2258, 2392
HhaI	GCGC	6 cut(s)	289, 291, 300, 1629, 1927, 2057
Hin1I	GRCGYC	1 cut(s)	2055
Hin6I	GCGC	6 cut(s)	287, 289, 298, 1627, 1925, 2055
HinP1I	GCGC	6 cut(s)	287, 289, 298, 1627, 1925, 2055
HincII	GTYRAC	3 cut(s)	1347, 1398, 2299
HindII	GTYRAC	3 cut(s)	1347, 1398, 2299
HindIII	AAGCTT	1 cut(s)	2435
HinfI	GANTC	7 cut(s)	89, 515, 553, 660, 1405, 1505, 1706
HpaI	GTTAAC	1 cut(s)	1398
HphI	GGTGA	7 cut(s)	55, 84, 532, 1757, 1964, 2104, 2546
Hpy188I	TCNGA	9 cut(s)	239, 304, 523, 552, 558, 1186, 2032, 2158, 2599
Hpy188III	TCNNGA	8 cut(s)	380, 707, 1165, 1267, 1732, 1744, 2114, 2612
Hpy99I	CGWCG	4 cut(s)	2136, 2398, 2459, 2564
HpyAV	CCTTC	8 cut(s)	443, 553, 1952, 2089, 2179, 2196, 2305, 2518
HpyCH4IV	ACGT	8 cut(s)	12, 510, 729, 1083, 1762, 1980, 2160, 2406
HpyCH4V	TGCA	8 cut(s)	638, 1178, 1262, 1685, 1936, 1962, 2367, 2371
HpyF3I	CTNAG	7 cut(s)	409, 811, 1819, 1850, 2022, 2144, 2598
HpySE526I	ACGT	8 cut(s)	12, 510, 729, 1083, 1762, 1980, 2160, 2406
Hsp92I	GRCGYC	1 cut(s)	2055
HspAI	GCGC	6 cut(s)	287, 289, 298, 1627, 1925, 2055
KasI	GGCGCC	1 cut(s)	2054
KflI	GGGWCCC	1 cut(s)	1845
Kpn2I	TCCGGA	1 cut(s)	2611
KspAI	GTTAAC	1 cut(s)	1398
Kzo9I	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
LguI	GCTCTTC	2 cut(s)	792, 1979
LmnI	GCTCC	4 cut(s)	901, 1894, 1952, 2416
Lsp1109I	GCAGC	4 cut(s)	650, 1920, 1934, 2152
LweI	GCATC	4 cut(s)	457, 565, 1249, 1737
MabI	ACCWGGT	1 cut(s)	1002
MaeI	CTAG	4 cut(s)	84, 563, 855, 2114
MaeII	ACGT	8 cut(s)	12, 510, 729, 1083, 1762, 1980, 2160, 2406
MaeIII	GTNAC	9 cut(s)	221, 457, 1148, 1165, 1444, 1559, 1763, 1853, 1976
MalI	GATC	7 cut(s)	394, 987, 1742, 1817, 1910, 2018, 2603
MboI	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
MfeI	CAATTG	1 cut(s)	1449
MflI	RGATCY	1 cut(s)	1908
MhlI	GDGCHC	5 cut(s)	804, 1278, 1723, 1964, 1991
Mly113I	GGCGCC	1 cut(s)	2055
MlyI	GAGTC	6 cut(s)	524, 562, 654, 1399, 1499, 1715
MmeI	TCCRAC	2 cut(s)	1069, 1983
Mph1103I	ATGCAT	1 cut(s)	2373
MroI	TCCGGA	1 cut(s)	2611
MslI	CAYNNNNRTG	7 cut(s)	110, 230, 767, 2063, 2090, 2274, 2376
MspA1I	CMGCKG	1 cut(s)	2143
MspR9I	CCNGG	5 cut(s)	1004, 1510, 1574, 2120, 2246
MunI	CAATTG	1 cut(s)	1449
MvaI	CCWGG	4 cut(s)	1004, 1510, 1574, 2246
MvnI	CGCG	5 cut(s)	289, 298, 1402, 1629, 1927
NarI	GGCGCC	1 cut(s)	2055
NciI	CCSGG	1 cut(s)	2120
NdeI	CATATG	1 cut(s)	373
NdeII	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
NlaIV	GGNNCC	5 cut(s)	1720, 1721, 1846, 1847, 2056
NmuCI	GTSAC	9 cut(s)	221, 457, 1148, 1165, 1444, 1559, 1763, 1853, 1976
NsiI	ATGCAT	1 cut(s)	2373
NspI	RCATGY	3 cut(s)	772, 1173, 2371
OliI	CACNNNNGTG	2 cut(s)	110, 2090
PaeI	GCATGC	1 cut(s)	2371
PauI	GCGCGC	1 cut(s)	287
PciSI	GCTCTTC	2 cut(s)	792, 1979
PfeI	GAWTC	1 cut(s)	89
Pfl23II	CGTACG	1 cut(s)	471
PflFI	GACNNNGTC	1 cut(s)	1040
PflMI	CCANNNNNTGG	1 cut(s)	271
PkrI	GCNGC	6 cut(s)	82, 640, 1591, 1924, 1935, 2142
PleI	GAGTC	6 cut(s)	523, 561, 654, 1399, 1499, 1714
PluTI	GGCGCC	1 cut(s)	2058
PpsI	GAGTC	6 cut(s)	523, 561, 654, 1399, 1499, 1714
PpuMI	RGGWCCY	1 cut(s)	1845
Psp1406I	AACGTT	2 cut(s)	729, 1083
Psp5II	RGGWCCY	1 cut(s)	1845
Psp6I	CCWGG	4 cut(s)	1002, 1508, 1572, 2244
PspGI	CCWGG	4 cut(s)	1002, 1508, 1572, 2244
PspLI	CGTACG	1 cut(s)	471
PspN4I	GGNNCC	5 cut(s)	1720, 1721, 1846, 1847, 2056
PspOMI	GGGCCC	1 cut(s)	1719
PspPI	GGNCC	7 cut(s)	377, 919, 1719, 1720, 1837, 1845, 2256
PspPPI	RGGWCCY	1 cut(s)	1845
PstI	CTGCAG	1 cut(s)	640
PstNI	CAGNNNCTG	2 cut(s)	461, 2143
PsuI	RGATCY	1 cut(s)	1908
PsyI	GACNNNGTC	1 cut(s)	1040
PteI	GCGCGC	1 cut(s)	287
PvuII	CAGCTG	1 cut(s)	2143
RseI	CAYNNNNRTG	7 cut(s)	110, 230, 767, 2063, 2090, 2274, 2376
SapI	GCTCTTC	2 cut(s)	792, 1979
SatI	GCNGC	6 cut(s)	81, 639, 1590, 1923, 1934, 2141
Sau3AI	GATC	7 cut(s)	392, 985, 1740, 1815, 1908, 2016, 2601
Sau96I	GGNCC	7 cut(s)	377, 919, 1719, 1720, 1837, 1845, 2256
ScaI	AGTACT	2 cut(s)	809, 890
SchI	GAGTC	6 cut(s)	524, 562, 654, 1399, 1499, 1715
ScrFI	CCNGG	5 cut(s)	1004, 1510, 1574, 2120, 2246
SduI	GDGCHC	5 cut(s)	804, 1278, 1723, 1964, 1991
SexAI	ACCWGGT	1 cut(s)	1002
SfaNI	GCATC	4 cut(s)	457, 565, 1249, 1737
SfcI	CTRYAG	1 cut(s)	636
SfoI	GGCGCC	1 cut(s)	2056
SgrAI	CRCCGGYG	1 cut(s)	1427
SinI	GGWCC	3 cut(s)	377, 1837, 1845
SmiMI	CAYNNNNRTG	7 cut(s)	110, 230, 767, 2063, 2090, 2274, 2376
SmlI	CTYRAG	1 cut(s)	1904
SmoI	CTYRAG	1 cut(s)	1904
SpeI	ACTAGT	1 cut(s)	854
SphI	GCATGC	1 cut(s)	2371
SsiI	CCGC	8 cut(s)	80, 349, 1103, 1125, 1402, 1551, 1590, 1629
SspDI	GGCGCC	1 cut(s)	2054
SspI	AATATT	3 cut(s)	1284, 2473, 2488
SspMI	CTAG	4 cut(s)	84, 563, 855, 2114
StyD4I	CCNGG	5 cut(s)	1002, 1508, 1572, 2118, 2244
TaiI	ACGT	8 cut(s)	15, 513, 732, 1086, 1765, 1983, 2163, 2409
TaqI	TCGA	6 cut(s)	690, 867, 1278, 1662, 1743, 2396
TaqII	GACCGA	3 cut(s)	405, 1071, 2573
TatI	WGTACW	3 cut(s)	807, 888, 2163
TauI	GCSGC	2 cut(s)	83, 1592
TfiI	GAWTC	1 cut(s)	89
TscAI	CASTG	8 cut(s)	226, 427, 466, 640, 760, 769, 1146, 1224
TseFI	GTSAC	9 cut(s)	221, 457, 1148, 1165, 1444, 1559, 1763, 1853, 1976
TseI	GCWGC	4 cut(s)	638, 1922, 1933, 2140
Tsp45I	GTSAC	9 cut(s)	221, 457, 1148, 1165, 1444, 1559, 1763, 1853, 1976
TspGWI	ACGGA	4 cut(s)	198, 489, 1751, 2458
TspRI	CASTG	8 cut(s)	226, 427, 466, 640, 760, 769, 1146, 1224
Tth111I	GACNNNGTC	1 cut(s)	1040
Van91I	CCANNNNNTGG	1 cut(s)	271
VneI	GTGCAC	1 cut(s)	1960
VpaK11BI	GGWCC	3 cut(s)	377, 1837, 1845
XapI	RAATTY	6 cut(s)	305, 973, 1249, 2342, 2423, 2564
XbaI	TCTAGA	1 cut(s)	2113
XceI	RCATGY	3 cut(s)	772, 1173, 2371
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1887, 1999
XspI	CTAG	4 cut(s)	84, 563, 855, 2114
ZrmI	AGTACT	2 cut(s)	809, 890
Zsp2I	ATGCAT	1 cut(s)	2373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.