pycom17g06000

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
4214259 .. 4217587
3329 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06000.2

Sequence Viewer

Length: 3048 bp
ATGATAAACGAAATTGGAATGGAGATACTTGCTCAAACATTTTCTCCTTTAGAAGCACACCAAGCAGTTGGTATCACACCCATATCCAAAGCACCACCTTCAATGTTGTCGTCCTCCGTCCAGGAGGAGCTGCTCATAAAGCTGATGCTAATGGCAATTTTGGTTACTGAAGAATTTTATGATGATGTGACAATAAACACACAAGTAAATAATAAGAGATTTATGTCCAGAAGGGTGGTTTTGTTTCTCCAACCACATCCTCTAATTGAATTGACGAGAACCACGTACTACGCCAAGAAGATAAACTTCGAGCGAGTCATTCTTCACTGCACAAAGACTTTGTGTAGACTTGTAGCTAATATTAAACAGGCAACACCTCACCCTTTCTATGTTTTTCTTACCATCATGAACAACCCCATCAGCAAACACCCAAATAAAACTCTCACTCCTCTTCTCCTTCCCCTTTTTTTCCTCATGATAACCATGTGCAAGGCTGGGGACCCGCCGCCAATCTACAATCCGTCTGAACAAATCACCCTTCAATGTGGCTATTCCGGTACCAAATTCGGCCAAGACTCCCGATATTGGGAAGGAGATATTGACACATCTTTTTTTTCATTCGGAGCAGCTGGTAACAAATCCATATTCAAAGAAGCACCTTTTCCCTCTTCTTCCGGCCAAGTGCCTTACGGCACAGCTAGGGTTTCCCGCTTTGAATTTACCTACACATTTCCACTCTCTTCTGGCCCAAAGTTCATCCGCTTGTATTTCTACCCAGCTTCATACGCCCCCCACTTCAACCGATCCCAAGCTCTCTTCTCAGTCAAAGCCGGAGGCTTTACGCTTCTCCGCGACTTCAACGCTTCAGCCACGGCTGATGCTTCTGGCTCGGATACTATATACAGAGAGTTCTGCCTCCATGCTGAGTCAGGACAGAATTTGAATGTCACGTTCACTCCAAGCAAAGCAAGCCCAGATGCCTACGCGTTTATCAATGGGATTGAAATTATCTCCATGCCCCCATATCTTTACTACACTTCACCCCAGAGCCCAGTTGGGGTTGCTTATGTAGGCAGCAAAAACACGATTCGCATCGAGAACAACACTGCTCTGGAGATGGTGTACCGAATCAATATCGGTGACAAAAGGCAGATCTATTCCGATCAGGACACTGGTATGTACCGCAATTGGGATGGTTTGGGAGACGAGTACAACTACTTAGACGATTTAAGTAGGAAGCTTAGTGTTTTACCACAGAACAGTAGCGTTCAGCTTAACTTTTCTGGAATACCAGAGTACTCTGCTCCAAAAGAAGTTTACCAAACCGGCCGCTCAATGGGCATGAACAAGACCATAAACAAGAGCTACAATCTCACCTGGGAATTCCCTGTGGATCCAATGTTTGCTTACTTGGCTAGGCTTCATTTTTGTGAGTTTGAAGGTGATGTTACGATGCCCCAAGACAGGCTATTTCATATCTACATCTCTAATCAATCCGTTGAGCAAACGGCAGACATAATCATGTGGAGCGGTGGAAATGGAAGACCAGTGTACAGAGACTACGTTGTGTTCATGTTGGGGAACCCTGCAATCCCCAAGAAAGTCAATCTCTTTCTTGCACTGGAAGCAAGCAAGGAGGATTGGTTGACTACTTACAACGACGCAATCTTGAACGGACTCGAAATGTTCAAACTCAGTACAAATCAGAGTCTAGCCAGACAAAGCCCCGACCCACCTTCTATAGCCCCAAAAAAGGGGACATCAAAACCAAGCACCAGGTCAAGAACTCCTTTGCTTGCCACGGTCATTGGTGTAGCTTCCGGCATACTTGGACTCTCTGTTCTTGGGTTCTTGGTTTTTCGGCGGTGGCAGAAGGTCAAGGACACTGGCTCAGATGGGTCGTCATCTTTACCACCACATTTGTGTCGTTGCTTTTCACTGTCGGAGATCAAAGCCGCCACCCAAAACTTCAGCCAGGGTTTCATTGTTGGTGTTGGCGGCTTTGGTCACGTGTACAAAGGGCATATCGACGGCGGGGCCACTCCCGTTGCGATCAAACGGCTGAAACCTGAGTCAAAGCAGGGAGCCCGTGAGTTCAAGACGGAAATCGAACTGCTCTCACAACTCAGACACCGCCATTTGTTGTCTCTCATTGGGTATTGTACTGATAAAAATGAGATGATTTTGGTGTACGATTACATGTCACATGGGACACTCGCTGACCATCTCTACCACAACGACAACCCACCTCTCTCCTGGGGACAACGGCTCCAAATTTGCATTGGCGCCGCGCGAGGGTTGCGCTACCTTCACAGCGATGCACAGGGCACTATCATCCACCGTGACGTGAAGAGCACAAACATTTTATTGGATGAGAAATGGGTGGCCAAGGTTTCGGATTTTGGATTGTCGAAAATGGGCACGACCACCATGTCCAAGACCCACATTAGCACAGCCGTGAAAGGCAGTTTCGGTTATCTAGACCCAGAATACTACCGACGTCAACAATTGACGGTGAAGTCCGATGTGTACTCATTCGGTGTAGTGTTGTGTGAAGTACTGTGCTCAAGACCAGCTGTGGTGCATGCAGTGGAGACAAGGCAAATGAACTTGGCTGAATGGGCCAAGAGCTGCCATTGCGACAGGGAACTTGATCGAATTATTGATCCGAATATGAAGGGTAAGATTGAAACCGAGTGTTTGAACAAGTTTGTGGAAATTGCTATGAGTTGCATCAATGACTTAATGGTCGTGATGATCGATCGAGCGTGCAACTGCATCAGAAGTGCGGTGAAAAGAACGACGAGGATGCCTTGGCTAGTGTGCCAGGTTGCGCTACGAATGAATCCGTTCAGTGCATATCCGAGACGATCTTCTCGGAAATCAACAATCCGAACGGGAGATGATGACAATTGTGTTTGTACCCAAATGAATGCTGAATTACTTGCAGTGCCTCACTTGCGTTGTTCTGCTTCTGGAACAGCTAATAGCACTTTCTACAAACAAACTGTAAACAAAATGCTTCATCTGGACTTTCAGACTTTGTAA

Protein Analysis

1016

Amino Acids

113.92

Weight (kDa)

8.79

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 2431, 2518, 2747
AatII GACGTC 1 cut(s) 2503
Acc65I GGTACC 1 cut(s) 557
AccB1I GGYRCC 2 cut(s) 557, 2285
AccBSI CCGCTC 2 cut(s) 1332, 1530
AccI GTMKAC 1 cut(s) 346
AccII CGCG 4 cut(s) 852, 986, 2291, 2293
AclWI GGATC 4 cut(s) 798, 1388, 1401, 2660
AcoI YGGCCR 4 cut(s) 568, 676, 1327, 2385
AcsI RAATTY 6 cut(s) 173, 563, 716, 937, 1382, 2274
AcuI CTGAAG 3 cut(s) 189, 849, 1954
AcvI CACGTG 1 cut(s) 2011
AcyI GRCGYC 2 cut(s) 2286, 2500
AfiI CCNNNNNNNGG 9 cut(s) 585, 586, 1057, 1189, 1336, 1464, 1753, 1754, 2295
AflIII ACRYGT 3 cut(s) 984, 2010, 2199
AjiI CACGTC 1 cut(s) 2347
AjnI CCWGG 6 cut(s) 120, 1376, 1775, 1974, 2255, 2826
AleI CACNNNNGTG 2 cut(s) 1921, 2456
AloI GAACNNNNNNTCC 2 cut(s) 1824, 1856
Alw21I GWGCWC 2 cut(s) 2357, 2567
Alw26I GTCTC 5 cut(s) 1197, 1551, 2151, 2588, 2860
AlwI GGATC 4 cut(s) 798, 1388, 1401, 2660
AoxI GGCC 7 cut(s) 568, 676, 745, 1327, 2037, 2385, 2622
ApeKI GCWGC 4 cut(s) 130, 626, 1074, 2631
ApoI RAATTY 6 cut(s) 173, 563, 716, 937, 1382, 2274
Asp700I GAANNNNTTC 1 cut(s) 2849
Asp718I GGTACC 1 cut(s) 557
AspLEI GCGC 4 cut(s) 2288, 2293, 2304, 2836
AspS9I GGNCC 4 cut(s) 499, 746, 2037, 2622
AsuHPI GGTGA 8 cut(s) 371, 526, 1032, 1151, 1366, 1454, 2527, 2803
AvaII GGWCC 1 cut(s) 499
BaeGI GKGCMC 2 cut(s) 2330, 2423
BalI TGGCCA 1 cut(s) 2387
BamHI GGATCC 1 cut(s) 1393
BanI GGYRCC 2 cut(s) 557, 2285
BanII GRGCYC 2 cut(s) 1052, 2089
BbrPI CACGTG 1 cut(s) 2011
BbsI GAAGAC 1 cut(s) 1549
Bbv12I GWGCWC 2 cut(s) 2357, 2567
BbvI GCAGC 4 cut(s) 117, 638, 1086, 2618
BccI CCATC 6 cut(s) 410, 425, 1111, 1187, 1889, 2232
BceAI ACGGC 7 cut(s) 706, 888, 1524, 2047, 2075, 2282, 2441
BcgI CGANNNNNNTGC 2 cut(s) 2791, 2825
BciT130I CCWGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
BciVI GTATCC 1 cut(s) 886
BcoDI GTCTC 5 cut(s) 1197, 1551, 2151, 2588, 2860
BfaI CTAG 5 cut(s) 699, 1416, 1712, 2480, 2819
BfmI CTRYAG 1 cut(s) 1740
BfoI RGCGCY 1 cut(s) 2289
BfuI GTATCC 1 cut(s) 886
BglII AGATCT 1 cut(s) 1152
BisI GCNGC 9 cut(s) 131, 506, 627, 1075, 1330, 1956, 1999, 2289, 2632
BlsI GCNGC 9 cut(s) 132, 507, 628, 1076, 1331, 1957, 2000, 2290, 2633
BmcAI AGTACT 2 cut(s) 1298, 2559
Bme1390I CCNGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
Bme18I GGWCC 1 cut(s) 499
BmgBI CACGTC 1 cut(s) 2347
BmgT120I GGNCC 4 cut(s) 499, 746, 2037, 2622
BmiI GGNNCC 9 cut(s) 500, 501, 559, 1395, 1583, 2038, 2086, 2270, 2287
BmrFI CCNGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
BmrI ACTGGG 1 cut(s) 1046
BmsI GCATC 9 cut(s) 135, 868, 967, 1101, 1443, 2308, 2742, 2787, 2799
BmuI ACTGGG 1 cut(s) 1046
BpiI GAAGAC 1 cut(s) 1549
BpmI CTGGAG 1 cut(s) 1133
BpuEI CTTGAG 1 cut(s) 2551
Bsa29I ATCGAT 1 cut(s) 2760
BsaAI YACGTR 2 cut(s) 285, 2011
BsaBI GATNNNNATC 1 cut(s) 1091
BsaHI GRCGYC 2 cut(s) 2286, 2500
BsaJI CCNNGG 7 cut(s) 870, 1377, 1800, 1975, 2256, 2388, 2813
BsaWI WCCGGW 1 cut(s) 554
Bsc4I CCNNNNNNNGG 9 cut(s) 585, 586, 1057, 1189, 1336, 1464, 1753, 1754, 2295
Bse118I RCCGGY 1 cut(s) 1325
Bse1I ACTGG 5 cut(s) 1052, 1177, 1547, 1626, 1891
Bse3DI GCAATG 1 cut(s) 2635
Bse8I GATNNNNATC 1 cut(s) 1091
BseBI CCWGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
BseCI ATCGAT 1 cut(s) 2760
BseDI CCNNGG 7 cut(s) 870, 1377, 1800, 1975, 2256, 2388, 2813
BseGI GGATG 6 cut(s) 256, 756, 1198, 2334, 2377, 2814
BseJI GATNNNNATC 1 cut(s) 1091
BseLI CCNNNNNNNGG 9 cut(s) 585, 586, 1057, 1189, 1336, 1464, 1753, 1754, 2295
BseMI GCAATG 1 cut(s) 2635
BseMII CTCAG 6 cut(s) 834, 915, 1708, 1905, 2061, 2140
BseNI ACTGG 5 cut(s) 1052, 1177, 1547, 1626, 1891
BseRI GAGGAG 2 cut(s) 140, 438
BseSI GKGCMC 2 cut(s) 2330, 2423
BseX3I CGGCCG 1 cut(s) 1327
BseXI GCAGC 4 cut(s) 117, 638, 1086, 2618
BseYI CCCAGC 2 cut(s) 494, 775
BsgI GTGCAG 1 cut(s) 313
Bsh1236I CGCG 4 cut(s) 852, 986, 2291, 2293
Bsh1285I CGRYCG 2 cut(s) 1330, 2764
BshFI GGCC 7 cut(s) 570, 678, 747, 1329, 2039, 2387, 2624
BshNI GGYRCC 2 cut(s) 557, 2285
BshVI ATCGAT 1 cut(s) 2760
BsiEI CGRYCG 2 cut(s) 1330, 2764
BsiHKAI GWGCWC 2 cut(s) 2357, 2567
BsiSI CCGG 5 cut(s) 555, 675, 831, 1326, 1821
BslFI GGGAC 4 cut(s) 512, 1771, 2224, 2274
BslI CCNNNNNNNGG 9 cut(s) 585, 586, 1057, 1189, 1336, 1464, 1753, 1754, 2295
BsmAI GTCTC 5 cut(s) 1197, 1551, 2151, 2588, 2860
BsmBI CGTCTC 2 cut(s) 1197, 2860
BsmFI GGGAC 4 cut(s) 512, 1771, 2224, 2274
BsmI GAATGC 1 cut(s) 2938
BsnI GGCC 7 cut(s) 570, 678, 747, 1329, 2039, 2387, 2624
Bsp1286I GDGCHC 6 cut(s) 1052, 2089, 2330, 2357, 2423, 2567
Bsp1407I TGTACA 2 cut(s) 1551, 2013
BspANI GGCC 7 cut(s) 570, 678, 747, 1329, 2039, 2387, 2624
BspCNI CTCAG 6 cut(s) 833, 916, 1707, 1904, 2062, 2139
BspDI ATCGAT 1 cut(s) 2760
BspFNI CGCG 4 cut(s) 852, 986, 2291, 2293
BspHI TCATGA 2 cut(s) 405, 474
BspLI GGNNCC 9 cut(s) 500, 501, 559, 1395, 1583, 2038, 2086, 2270, 2287
BspPI GGATC 4 cut(s) 798, 1388, 1401, 2660
BspQI GCTCTTC 1 cut(s) 2345
BspT107I GGYRCC 2 cut(s) 557, 2285
BsrBI CCGCTC 2 cut(s) 1332, 1530
BsrDI GCAATG 1 cut(s) 2635
BsrFI RCCGGY 1 cut(s) 1325
BsrGI TGTACA 2 cut(s) 1551, 2013
BsrI ACTGG 5 cut(s) 1052, 1177, 1547, 1626, 1891
BssAI RCCGGY 1 cut(s) 1325
BssECI CCNNGG 7 cut(s) 870, 1377, 1800, 1975, 2256, 2388, 2813
BssNI GRCGYC 2 cut(s) 2286, 2500
BssT1I CCWWGG 2 cut(s) 2388, 2813
Bst2UI CCWGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
Bst4CI ACNGT 7 cut(s) 1262, 1804, 1941, 2342, 2515, 2562, 3010
Bst6I CTCTTC 5 cut(s) 456, 673, 745, 821, 2345
BstACI GRCGYC 2 cut(s) 2286, 2500
BstAUI TGTACA 2 cut(s) 1551, 2013
BstBAI YACGTR 2 cut(s) 285, 2011
BstC8I GCNNGC 5 cut(s) 970, 1630, 1797, 2586, 2770
BstDEI CTNAG 8 cut(s) 820, 924, 1219, 1241, 1694, 1891, 2070, 2126
BstDSI CCRYGG 2 cut(s) 870, 1800
BstF5I GGATG 6 cut(s) 256, 756, 1198, 2334, 2377, 2814
BstFNI CGCG 4 cut(s) 852, 986, 2291, 2293
BstH2I RGCGCY 1 cut(s) 2289
BstHHI GCGC 4 cut(s) 2288, 2293, 2304, 2836
BstMAI GTCTC 5 cut(s) 1197, 1551, 2151, 2588, 2860
BstMCI CGRYCG 2 cut(s) 1330, 2764
BstNI CCWGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
BstNSI RCATGY 2 cut(s) 2203, 2588
BstSCI CCNGG 6 cut(s) 120, 1376, 1775, 1974, 2255, 2826
BstSFI CTRYAG 1 cut(s) 1740
BstSLI GKGCMC 2 cut(s) 2330, 2423
BstUI CGCG 4 cut(s) 852, 986, 2291, 2293
BstV1I GCAGC 4 cut(s) 117, 638, 1086, 2618
BstV2I GAAGAC 1 cut(s) 1549
BstX2I RGATCY 2 cut(s) 1152, 1393
BstXI CCANNNNNNTGG 2 cut(s) 68, 235
BstYI RGATCY 2 cut(s) 1152, 1393
BstZI CGGCCG 1 cut(s) 1327
Bsu15I ATCGAT 1 cut(s) 2760
BsuI GTATCC 1 cut(s) 886
BsuRI GGCC 7 cut(s) 570, 678, 747, 1329, 2039, 2387, 2624
BsuTUI ATCGAT 1 cut(s) 2760
BtgI CCRYGG 2 cut(s) 870, 1800
BtgZI GCGATG 1 cut(s) 2331
BtrI CACGTC 1 cut(s) 2347
BtsCI GGATG 6 cut(s) 256, 756, 1198, 2334, 2377, 2814
BtsI GCAGTG 4 cut(s) 325, 1104, 2595, 2955
Cac8I GCNNGC 5 cut(s) 970, 1630, 1797, 2586, 2770
CciI TCATGA 2 cut(s) 405, 474
CfoI GCGC 4 cut(s) 2288, 2293, 2304, 2836
Cfr10I RCCGGY 1 cut(s) 1325
Cfr13I GGNCC 4 cut(s) 499, 746, 2037, 2622
ClaI ATCGAT 1 cut(s) 2760
CseI GACGC 1 cut(s) 1670
CsiI ACCWGGT 1 cut(s) 1775
CspCI CAANNNNNGTGG 6 cut(s) 1789, 1824, 1902, 1937, 2029, 2064
DdeI CTNAG 8 cut(s) 820, 924, 1219, 1241, 1694, 1891, 2070, 2126
DinI GGCGCC 1 cut(s) 2287
DrdI GACNNNNNNGTC 3 cut(s) 2431, 2518, 2747
DseDI GACNNNNNNGTC 3 cut(s) 2431, 2518, 2747
EaeI YGGCCR 4 cut(s) 568, 676, 1327, 2385
EagI CGGCCG 1 cut(s) 1327
Eam1104I CTCTTC 5 cut(s) 456, 673, 745, 821, 2345
EarI CTCTTC 5 cut(s) 456, 673, 745, 821, 2345
EclXI CGGCCG 1 cut(s) 1327
Eco130I CCWWGG 2 cut(s) 2388, 2813
Eco24I GRGCYC 2 cut(s) 1052, 2089
Eco47I GGWCC 1 cut(s) 499
Eco52I CGGCCG 1 cut(s) 1327
Eco57I CTGAAG 3 cut(s) 189, 849, 1954
Eco72I CACGTG 1 cut(s) 2011
EcoO109I RGGNCCY 1 cut(s) 499
EcoRI GAATTC 1 cut(s) 1382
EcoRII CCWGG 6 cut(s) 120, 1376, 1775, 1974, 2255, 2826
EcoT14I CCWWGG 2 cut(s) 2388, 2813
EcoT38I GRGCYC 2 cut(s) 1052, 2089
EgeI GGCGCC 1 cut(s) 2287
EheI GGCGCC 1 cut(s) 2287
ErhI CCWWGG 2 cut(s) 2388, 2813
Esp3I CGTCTC 2 cut(s) 1197, 2860
FalI AAGNNNNNCTT 4 cut(s) 290, 322, 1774, 1806
FaqI GGGAC 4 cut(s) 512, 1771, 2224, 2274
FauI CCCGC 3 cut(s) 510, 716, 2027
FblI GTMKAC 1 cut(s) 346
Fnu4HI GCNGC 9 cut(s) 131, 506, 627, 1075, 1330, 1956, 1999, 2289, 2632
FokI GGATG 6 cut(s) 243, 743, 1205, 2321, 2384, 2821
FriOI GRGCYC 2 cut(s) 1052, 2089
Fsp4HI GCNGC 9 cut(s) 131, 506, 627, 1075, 1330, 1956, 1999, 2289, 2632
FspBI CTAG 5 cut(s) 699, 1416, 1712, 2480, 2819
GlaI GCGC 4 cut(s) 2287, 2292, 2303, 2835
GluI GCNGC 9 cut(s) 131, 506, 627, 1075, 1330, 1956, 1999, 2289, 2632
GsaI CCCAGC 2 cut(s) 498, 779
GsuI CTGGAG 1 cut(s) 1133
HaeII RGCGCY 1 cut(s) 2289
HaeIII GGCC 7 cut(s) 570, 678, 747, 1329, 2039, 2387, 2624
HapII CCGG 5 cut(s) 555, 675, 831, 1326, 1821
HgaI GACGC 1 cut(s) 1670
HhaI GCGC 4 cut(s) 2288, 2293, 2304, 2836
Hin1I GRCGYC 2 cut(s) 2286, 2500
Hin6I GCGC 4 cut(s) 2286, 2291, 2302, 2834
HinP1I GCGC 4 cut(s) 2286, 2291, 2302, 2834
HincII GTYRAC 2 cut(s) 1647, 2504
HindII GTYRAC 2 cut(s) 1647, 2504
HindIII AAGCTT 1 cut(s) 1238
HpaII CCGG 5 cut(s) 555, 675, 831, 1326, 1821
HphI GGTGA 8 cut(s) 371, 526, 1032, 1151, 1366, 1454, 2527, 2803
Hpy99I CGWCG 4 cut(s) 1664, 2033, 2502, 2806
HpyCH4III ACNGT 7 cut(s) 1262, 1804, 1941, 2342, 2515, 2562, 3010
HpyCH4IV ACGT 6 cut(s) 284, 950, 1563, 2010, 2346, 2500
HpyF3I CTNAG 8 cut(s) 820, 924, 1219, 1241, 1694, 1891, 2070, 2126
HpySE526I ACGT 6 cut(s) 284, 950, 1563, 2010, 2346, 2500
Hsp92I GRCGYC 2 cut(s) 2286, 2500
HspAI GCGC 4 cut(s) 2286, 2291, 2302, 2834
KasI GGCGCC 1 cut(s) 2285
KflI GGGWCCC 1 cut(s) 499
KpnI GGTACC 1 cut(s) 561
LguI GCTCTTC 1 cut(s) 2345
LmnI GCTCC 6 cut(s) 127, 623, 1309, 1527, 2084, 2274
Lsp1109I GCAGC 4 cut(s) 117, 638, 1086, 2618
LweI GCATC 9 cut(s) 135, 868, 967, 1101, 1443, 2308, 2742, 2787, 2799
MabI ACCWGGT 1 cut(s) 1775
MaeI CTAG 5 cut(s) 699, 1416, 1712, 2480, 2819
MaeII ACGT 6 cut(s) 284, 950, 1563, 2010, 2346, 2500
MaeIII GTNAC 9 cut(s) 163, 187, 632, 946, 1139, 1447, 2006, 2202, 2342
MbiI CCGCTC 2 cut(s) 1332, 1530
MfeI CAATTG 3 cut(s) 1186, 2507, 2911
MflI RGATCY 2 cut(s) 1152, 1393
MhlI GDGCHC 6 cut(s) 1052, 2089, 2330, 2357, 2423, 2567
MlsI TGGCCA 1 cut(s) 2387
MluI ACGCGT 1 cut(s) 984
MluNI TGGCCA 1 cut(s) 2387
Mly113I GGCGCC 1 cut(s) 2286
MlyI GAGTC 7 cut(s) 324, 569, 935, 1671, 1717, 1827, 2081
MmeI TCCRAC 2 cut(s) 274, 1923
Mox20I TGGCCA 1 cut(s) 2387
MroXI GAANNNNTTC 1 cut(s) 2849
MscI TGGCCA 1 cut(s) 2387
MseI TTAA 4 cut(s) 363, 1229, 1275, 2744
MslI CAYNNNNRTG 6 cut(s) 1175, 1428, 1520, 1921, 2316, 2456
Msp20I TGGCCA 1 cut(s) 2387
MspA1I CMGCKG 2 cut(s) 629, 2576
MspI CCGG 5 cut(s) 555, 675, 831, 1326, 1821
MspR9I CCNGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
MteI GCGCNGCGC 1 cut(s) 2289
MunI CAATTG 3 cut(s) 1186, 2507, 2911
Mva1269I GAATGC 1 cut(s) 2938
MvaI CCWGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
MvnI CGCG 4 cut(s) 852, 986, 2291, 2293
NarI GGCGCC 1 cut(s) 2286
NlaIV GGNNCC 9 cut(s) 500, 501, 559, 1395, 1583, 2038, 2086, 2270, 2287
NmuCI GTSAC 6 cut(s) 187, 946, 1139, 2006, 2202, 2342
NspI RCATGY 2 cut(s) 2203, 2588
OliI CACNNNNGTG 2 cut(s) 1921, 2456
PaeI GCATGC 1 cut(s) 2588
PagI TCATGA 2 cut(s) 405, 474
PciI ACATGT 1 cut(s) 2199
PciSI GCTCTTC 1 cut(s) 2345
PcsI WCGNNNNNNNCGW 2 cut(s) 281, 2757
PctI GAATGC 1 cut(s) 2938
PdmI GAANNNNTTC 1 cut(s) 2849
PfeI GAWTC 3 cut(s) 1087, 1128, 2845
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 9 cut(s) 132, 507, 628, 1076, 1331, 1957, 2000, 2290, 2633
Ple19I CGATCG 1 cut(s) 2764
PleI GAGTC 7 cut(s) 323, 569, 934, 1671, 1716, 1827, 2080
PluTI GGCGCC 1 cut(s) 2289
PmaCI CACGTG 1 cut(s) 2011
PmlI CACGTG 1 cut(s) 2011
PpsI GAGTC 7 cut(s) 323, 569, 934, 1671, 1716, 1827, 2080
Ppu21I YACGTR 2 cut(s) 285, 2011
PpuMI RGGWCCY 1 cut(s) 499
PscI ACATGT 1 cut(s) 2199
Psp5II RGGWCCY 1 cut(s) 499
Psp6I CCWGG 6 cut(s) 120, 1376, 1775, 1974, 2255, 2826
PspCI CACGTG 1 cut(s) 2011
PspFI CCCAGC 2 cut(s) 494, 775
PspGI CCWGG 6 cut(s) 120, 1376, 1775, 1974, 2255, 2826
PspN4I GGNNCC 9 cut(s) 500, 501, 559, 1395, 1583, 2038, 2086, 2270, 2287
PspPI GGNCC 4 cut(s) 499, 746, 2037, 2622
PspPPI RGGWCCY 1 cut(s) 499
PsuI RGATCY 2 cut(s) 1152, 1393
PvuI CGATCG 1 cut(s) 2764
PvuII CAGCTG 2 cut(s) 629, 2576
RseI CAYNNNNRTG 6 cut(s) 1175, 1428, 1520, 1921, 2316, 2456
SapI GCTCTTC 1 cut(s) 2345
SaqAI TTAA 4 cut(s) 363, 1229, 1275, 2744
SatI GCNGC 9 cut(s) 131, 506, 627, 1075, 1330, 1956, 1999, 2289, 2632
Sau96I GGNCC 4 cut(s) 499, 746, 2037, 2622
ScaI AGTACT 2 cut(s) 1298, 2559
SchI GAGTC 7 cut(s) 324, 569, 935, 1671, 1717, 1827, 2081
ScrFI CCNGG 6 cut(s) 122, 1378, 1777, 1976, 2257, 2828
SduI GDGCHC 6 cut(s) 1052, 2089, 2330, 2357, 2423, 2567
SexAI ACCWGGT 1 cut(s) 1775
SfaNI GCATC 9 cut(s) 135, 868, 967, 1101, 1443, 2308, 2742, 2787, 2799
SfcI CTRYAG 1 cut(s) 1740
SfoI GGCGCC 1 cut(s) 2287
SinI GGWCC 1 cut(s) 499
SmiMI CAYNNNNRTG 6 cut(s) 1175, 1428, 1520, 1921, 2316, 2456
SmlI CTYRAG 1 cut(s) 2566
SmoI CTYRAG 1 cut(s) 2566
SphI GCATGC 1 cut(s) 2588
SspDI GGCGCC 1 cut(s) 2285
SspI AATATT 1 cut(s) 361
SspMI CTAG 5 cut(s) 699, 1416, 1712, 2480, 2819
StyD4I CCNGG 6 cut(s) 120, 1376, 1775, 1974, 2255, 2826
StyI CCWWGG 2 cut(s) 2388, 2813
TaaI ACNGT 7 cut(s) 1262, 1804, 1941, 2342, 2515, 2562, 3010
TaiI ACGT 6 cut(s) 287, 953, 1566, 2013, 2349, 2503
TaqI TCGA 9 cut(s) 309, 1095, 1680, 2028, 2109, 2411, 2656, 2760, 2764
TatI WGTACW 8 cut(s) 1209, 1296, 1551, 1697, 2013, 2162, 2529, 2557
TauI GCSGC 5 cut(s) 508, 1332, 1958, 2001, 2291
TfiI GAWTC 3 cut(s) 1087, 1128, 2845
Tru1I TTAA 4 cut(s) 363, 1229, 1275, 2744
Tru9I TTAA 4 cut(s) 363, 1229, 1275, 2744
TseFI GTSAC 6 cut(s) 187, 946, 1139, 2006, 2202, 2342
TseI GCWGC 4 cut(s) 130, 626, 1074, 2631
Tsp45I GTSAC 6 cut(s) 187, 946, 1139, 2006, 2202, 2342
TspGWI ACGGA 6 cut(s) 106, 510, 1486, 1689, 2117, 2838
VpaK11BI GGWCC 1 cut(s) 499
XapI RAATTY 6 cut(s) 173, 563, 716, 937, 1382, 2274
XbaI TCTAGA 1 cut(s) 2479
XceI RCATGY 2 cut(s) 2203, 2588
XcmI CCANNNNNNNNNTGG 3 cut(s) 1052, 2253, 2279
XmiI GTMKAC 1 cut(s) 346
XmnI GAANNNNTTC 1 cut(s) 2849
XspI CTAG 5 cut(s) 699, 1416, 1712, 2480, 2819
ZraI GACGTC 1 cut(s) 2501
ZrmI AGTACT 2 cut(s) 1298, 2559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.