Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013532.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

21238 .. 23829

Gene Structure 2592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013532.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

atgaaacctattttcattcctctttacccttccagcttgtttctactgttcgtcaccctactggtggccggcgagtccgcacctatctactctccatccgatgatattacccttaactgcggctcttccggcgacacagtcagtaattatgattttcaaacttggacgggggacatcaactcaaagtttttccccgaagcagttggtagcgcatcccaagtcgagaaagcaccactgtcgtcctccatgggcagccaagtgccattcaccacagctcggctttcgtattcggaattcacttacatctttcccgtaagtccaggccagaagttcatccgcttgtatttcttcccagccacgtacaacgtggacttcgaccgctcgaaatcacttttctccgtcaaagccggtggctacagacttctcaaggacttcaacgcttctctcagtagtacagtctacgatgtctctgagacgatacttagggaattctgtgtcaactttgagccagatcagcggagtctgaacatcacattcactcccagccagggtggatacgcttttattaacgggatcgaaatcatgtccatgccaaccaatctttaccactcggcagcccaaggcgatgggactagttatctcggcaacagcggtagcagatattatgttgaaaacaacaccgctctggagatgatcttccgaatcaacgttggtggcagctcagtatctccgaatgaagacaccggcatgtaccgcacctgggatccaatcgacgagttctacttggatgatctaagtagaaatttgagcgctgcacgaagatataatactcctgtcaattttgcaagaatccctaactacactgctcccgaagaggtgtaccgaacaggccggacaatgggagggaccagtaccatcaacaagagctacaatctcacctggggattccctgtagatcccgacttttcttacctggtgaggctccatttctgtgagattgacccaaatatttccaaggcttggggtagagtgtttcagatattcatagccaatttaacagctgaaccgttcgcggacataatcagatggactacagaaaatggagaaggaaatgggattcccatctatagggactactttgtaccggtgccgatatttggaacccagaagaaaggttccgttaatctctttgttgcactacaagcatatcaagacgattattacactcaatataacgatgcgatcttgaatgggctggaaatcttcaaacttaatgacacagacggcaatctcggcggacccatccccgagctaccgaatatcccgccaaaggtgacgtcggaaagctctagaaactcgaagaagaagtcgactcctatgcttgctatcatcgccggtgtagtttcggccttacttgttctttccttcctcgggtttttagttttcaggcgtggacgaaaagtcaaggattccaaatccagccacaggatgacaacgtcaaccatgacccttaggtcaccttatccatcttatttgtgccgtgacttttcactggcagagatcaaagccgccaccaaaaacttcgatgacactttaattgttggagtcggtgggtttggccatgtctacaaaggatacttcgacaagggggccacccttgtggcaatcaaacggctgaaagccacttcatcgcagggggcccacgagttcatgacggaaatcaaaatgctctcccgattgcgccatcgtcatttggtttctcttataggattttgtgccgatcaaggtgagatgatcttagtctatgattacatggcacgtgggaccctcagtgatcatttgcaccggaccaaggaaccacctcttccttggaaactacggcttcacatttgtattggtgcagcacaaggtttgcactaccttcacacaggtactgaaggcaccatcattcaccgtgacgtaaagagcgcaaacatattattagacgagaaatgggtagcgaaggtttcagattttgggttgtcaaaaaagggcattatcacaatatccaagacccacattagcacgaaggtgaagggtagttttggatatcttgaccctgattactaccgacgtcaacaactgactgagaagtctgacgtgtattcattcggcgtagtgttatgcgaggtattgtgtgggaggccagctgtgaccattgtagataataatagagttgggctagctagctgggtcaagaagtgtcatcatgaagggaaacttgatcaaattgttgacccaaatgtgaagggtgaaattgcattgcgatgcttgcataaatttgtttccatcgcaatcagttgcatggatgataatgggatcaatcggccgtcaatggagaatgttgtgagagggcttcaatttgcatttgaaatgcaacagaacaacgagaattatattgatcacattgaaatgatggttcaagatgagattggattgatcaaggacaataaagggtctagttctagtgagcgaagcagtggggcgaaagaatccatccaaaggttgaccgggacaatcttctccgagatcatcgatccagttgggagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

863

Amino Acids

96.34

Weight (kDa)

7.26

Isoelectric Point (pI)

37.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1513, 2131
AatII	GACGTC	2 cut(s)	1340, 2116
AccB1I	GGYRCC	2 cut(s)	1147, 1940
AccB7I	CCANNNNNTGG	1 cut(s)	1020
AccBSI	CCGCTC	2 cut(s)	381, 683
AccI	GTMKAC	3 cut(s)	459, 1370, 1626
AccII	CGCG	1 cut(s)	1073
AclI	AACGTT	1 cut(s)	708
AclWI	GGATC	6 cut(s)	581, 758, 771, 950, 2366, 2570
AcoI	YGGCCR	3 cut(s)	66, 1618, 2366
AcsI	RAATTY	4 cut(s)	293, 488, 802, 2318
AcuI	CTGAAG	1 cut(s)	1956
AcvI	CACGTG	1 cut(s)	1820
AcyI	GRCGYC	2 cut(s)	1337, 2113
AfaI	GTAC	7 cut(s)	362, 454, 752, 881, 913, 1143, 1933
AfeI	AGCGCT	1 cut(s)	811
AflIII	ACRYGT	1 cut(s)	2139
AgeI	ACCGGT	1 cut(s)	1144
AgsI	TTSAA	9 cut(s)	158, 436, 671, 1249, 1267, 2399, 2411, 2450, 2462
AhdI	GACNNNNNGTC	1 cut(s)	1460
AhlI	ACTAGT	1 cut(s)	632
AjiI	CACGTC	1 cut(s)	2140
AjnI	CCWGG	5 cut(s)	319, 546, 758, 938, 972
AleI	CACNNNNGTG	2 cut(s)	1658, 2069
Alw26I	GTCTC	2 cut(s)	467, 472
AlwI	GGATC	6 cut(s)	581, 758, 771, 950, 2366, 2570
AlwNI	CAGNNNCTG	1 cut(s)	1934
Ama87I	CYCGRG	2 cut(s)	1307, 1430
Aor51HI	AGCGCT	1 cut(s)	811
AoxI	GGCC	9 cut(s)	66, 322, 889, 1407, 1618, 1650, 1698, 2183, 2366
ApaI	GGGCCC	1 cut(s)	1702
ApeKI	GCWGC	5 cut(s)	252, 614, 717, 812, 1901
ApoI	RAATTY	4 cut(s)	293, 488, 802, 2318
ArsI	GACNNNNNNTTYG	4 cut(s)	1322, 1352, 1354, 1384
AsiGI	ACCGGT	1 cut(s)	1144
AspLEI	GCGC	4 cut(s)	212, 812, 1743, 1970
AspS9I	GGNCC	7 cut(s)	906, 1298, 1650, 1698, 1699, 1824, 1848
AsuC2I	CCSGG	1 cut(s)	2551
AsuNHI	GCTAGC	2 cut(s)	2221, 2225
AvaI	CYCGRG	2 cut(s)	1307, 1430
AvaII	GGWCC	4 cut(s)	906, 1298, 1824, 1848
AxyI	CCTNAGG	1 cut(s)	1511
BaeGI	GKGCMC	1 cut(s)	1702
BalI	TGGCCA	1 cut(s)	1620
BamHI	GGATCC	1 cut(s)	763
BanI	GGYRCC	2 cut(s)	1147, 1940
BanII	GRGCYC	1 cut(s)	1702
BarI	GAAGNNNNNNTAC	2 cut(s)	811, 843
BauI	CACGAG	1 cut(s)	1703
BbrPI	CACGTG	1 cut(s)	1820
BbsI	GAAGAC	1 cut(s)	744
BbvI	GCAGC	5 cut(s)	264, 626, 729, 799, 1913
BceAI	ACGGC	5 cut(s)	1300, 1524, 1688, 1895, 2353
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1360, 1394
BciT130I	CCWGG	5 cut(s)	321, 548, 760, 940, 974
BciVI	GTATCC	2 cut(s)	548, 1628
BclI	TGATCA	4 cut(s)	1834, 2263, 2440, 2478
BcnI	CCSGG	1 cut(s)	2551
BcoDI	GTCTC	2 cut(s)	467, 472
BcuI	ACTAGT	1 cut(s)	632
BfaI	CTAG	6 cut(s)	633, 1350, 2222, 2226, 2499, 2505
BfmI	CTRYAG	4 cut(s)	415, 951, 1092, 1126
BfoI	RGCGCY	1 cut(s)	813
BfuI	GTATCC	2 cut(s)	548, 1628
BisI	GCNGC	7 cut(s)	121, 253, 615, 718, 813, 1569, 1902
BlsI	GCNGC	7 cut(s)	122, 254, 616, 719, 814, 1570, 1903
Bme1390I	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
Bme18I	GGWCC	4 cut(s)	906, 1298, 1824, 1848
BmeRI	GACNNNNNGTC	1 cut(s)	1460
BmeT110I	CYCGRG	2 cut(s)	1307, 1430
BmgBI	CACGTC	1 cut(s)	2140
BmgT120I	GGNCC	7 cut(s)	906, 1298, 1650, 1698, 1699, 1824, 1848
BmrFI	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
BmsI	GCATC	3 cut(s)	221, 1228, 2297
BmtI	GCTAGC	2 cut(s)	2225, 2229
BpiI	GAAGAC	1 cut(s)	744
BpmI	CTGGAG	1 cut(s)	707
BpuEI	CTTGAG	1 cut(s)	410
BpuMI	CCSGG	1 cut(s)	2551
Bsa29I	ATCGAT	1 cut(s)	2574
BsaAI	YACGTR	2 cut(s)	360, 1820
BsaBI	GATNNNNATC	2 cut(s)	578, 1121
BsaHI	GRCGYC	2 cut(s)	1337, 2113
BsaJI	CCNNGG	9 cut(s)	246, 547, 619, 759, 939, 1014, 1429, 1851, 1868
BsaWI	WCCGGW	2 cut(s)	1144, 1845
BsaXI	ACNNNNNCTCC	2 cut(s)	523, 553
Bse118I	RCCGGY	5 cut(s)	68, 407, 743, 1144, 1394
Bse1I	ACTGG	4 cut(s)	66, 909, 1557, 2579
Bse21I	CCTNAGG	1 cut(s)	1511
Bse3DI	GCAATG	1 cut(s)	2300
Bse8I	GATNNNNATC	2 cut(s)	578, 1121
BseBI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
BseCI	ATCGAT	1 cut(s)	2574
BseDI	CCNNGG	9 cut(s)	246, 547, 619, 759, 939, 1014, 1429, 1851, 1868
BseGI	GGATG	8 cut(s)	95, 212, 333, 793, 1302, 1494, 2353, 2535
BseJI	GATNNNNATC	2 cut(s)	578, 1121
BseMI	GCAATG	1 cut(s)	2300
BseMII	CTCAG	5 cut(s)	460, 462, 735, 1843, 2118
BseNI	ACTGG	4 cut(s)	66, 909, 1557, 2579
BseSI	GKGCMC	1 cut(s)	1702
BseX3I	CGGCCG	1 cut(s)	2366
BseXI	GCAGC	5 cut(s)	264, 626, 729, 799, 1913
BseYI	CCCAGC	3 cut(s)	352, 542, 2229
BsgI	GTGCAG	2 cut(s)	798, 1920
Bsh1236I	CGCG	1 cut(s)	1073
Bsh1285I	CGRYCG	2 cut(s)	379, 2369
BshFI	GGCC	9 cut(s)	68, 324, 891, 1409, 1620, 1652, 1700, 2185, 2368
BshNI	GGYRCC	2 cut(s)	1147, 1940
BshTI	ACCGGT	1 cut(s)	1144
BshVI	ATCGAT	1 cut(s)	2574
BsiEI	CGRYCG	2 cut(s)	379, 2369
BsiHKCI	CYCGRG	2 cut(s)	1307, 1430
BsiSI	CCGG	9 cut(s)	69, 129, 408, 744, 892, 1145, 1395, 1846, 2550
BslFI	GGGAC	6 cut(s)	185, 643, 919, 1145, 1837, 2566
BsmAI	GTCTC	2 cut(s)	467, 472
BsmBI	CGTCTC	1 cut(s)	467
BsmFI	GGGAC	6 cut(s)	185, 643, 919, 1145, 1837, 2566
BsnI	GGCC	9 cut(s)	68, 324, 891, 1409, 1620, 1652, 1700, 2185, 2368
BsoBI	CYCGRG	2 cut(s)	1307, 1430
Bsp120I	GGGCCC	1 cut(s)	1698
Bsp1286I	GDGCHC	1 cut(s)	1702
Bsp19I	CCATGG	1 cut(s)	246
BspANI	GGCC	9 cut(s)	68, 324, 891, 1409, 1620, 1652, 1700, 2185, 2368
BspCNI	CTCAG	5 cut(s)	459, 463, 734, 1842, 2119
BspDI	ATCGAT	1 cut(s)	2574
BspFNI	CGCG	1 cut(s)	1073
BspHI	TCATGA	2 cut(s)	1710, 2248
BspOI	GCTAGC	2 cut(s)	2225, 2229
BspPI	GGATC	6 cut(s)	581, 758, 771, 950, 2366, 2570
BspQI	GCTCTTC	1 cut(s)	130
BspT107I	GGYRCC	2 cut(s)	1147, 1940
BsrBI	CCGCTC	2 cut(s)	381, 683
BsrDI	GCAATG	1 cut(s)	2300
BsrFI	RCCGGY	5 cut(s)	68, 407, 743, 1144, 1394
BsrI	ACTGG	4 cut(s)	66, 909, 1557, 2579
BssAI	RCCGGY	5 cut(s)	68, 407, 743, 1144, 1394
BssECI	CCNNGG	9 cut(s)	246, 547, 619, 759, 939, 1014, 1429, 1851, 1868
BssNI	GRCGYC	2 cut(s)	1337, 2113
BssSI	CACGAG	1 cut(s)	1703
BssT1I	CCWWGG	5 cut(s)	246, 619, 1014, 1851, 1868
Bst2BI	CACGAG	1 cut(s)	1703
Bst2UI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
Bst4CI	ACNGT	6 cut(s)	48, 139, 237, 457, 1068, 1955
Bst6I	CTCTTC	3 cut(s)	130, 867, 1869
BstACI	GRCGYC	2 cut(s)	1337, 2113
BstBAI	YACGTR	2 cut(s)	360, 1820
BstC8I	GCNNGC	6 cut(s)	70, 1383, 2187, 2223, 2227, 2312
BstDEI	CTNAG	9 cut(s)	446, 471, 482, 721, 794, 1511, 1798, 1829, 2127
BstDSI	CCRYGG	1 cut(s)	246
BstEII	GGTNACC	1 cut(s)	1515
BstF5I	GGATG	8 cut(s)	95, 212, 333, 793, 1302, 1494, 2353, 2535
BstFNI	CGCG	1 cut(s)	1073
BstH2I	RGCGCY	1 cut(s)	813
BstHHI	GCGC	4 cut(s)	212, 812, 1743, 1970
BstMAI	GTCTC	2 cut(s)	467, 472
BstMCI	CGRYCG	2 cut(s)	379, 2369
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 514, 753, 1202, 1293, 1391, 2311
BstNI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
BstNSI	RCATGY	1 cut(s)	751
BstPI	GGTNACC	1 cut(s)	1515
BstSCI	CCNGG	6 cut(s)	319, 546, 758, 938, 972, 2549
BstSFI	CTRYAG	4 cut(s)	415, 951, 1092, 1126
BstSLI	GKGCMC	1 cut(s)	1702
BstUI	CGCG	1 cut(s)	1073
BstV1I	GCAGC	5 cut(s)	264, 626, 729, 799, 1913
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	2 cut(s)	763, 955
BstXI	CCANNNNNNTGG	2 cut(s)	626, 1660
BstYI	RGATCY	2 cut(s)	763, 955
BstZI	CGGCCG	1 cut(s)	2366
Bsu15I	ATCGAT	1 cut(s)	2574
Bsu36I	CCTNAGG	1 cut(s)	1511
BsuI	GTATCC	2 cut(s)	548, 1628
BsuRI	GGCC	9 cut(s)	68, 324, 891, 1409, 1620, 1652, 1700, 2185, 2368
BsuTUI	ATCGAT	1 cut(s)	2574
BtgI	CCRYGG	1 cut(s)	246
BtgZI	GCGATG	5 cut(s)	639, 1375, 1674, 2314, 2320
BtrI	CACGTC	1 cut(s)	2140
BtsCI	GGATG	8 cut(s)	95, 212, 333, 793, 1302, 1494, 2353, 2535
BtsI	GCAGTG	2 cut(s)	861, 2524
BtsIMutI	CAGTG	5 cut(s)	233, 861, 1550, 1837, 2524
Cac8I	GCNNGC	6 cut(s)	70, 1383, 2187, 2223, 2227, 2312
CaiI	CAGNNNCTG	1 cut(s)	1934
CciI	TCATGA	2 cut(s)	1710, 2248
CfoI	GCGC	4 cut(s)	212, 812, 1743, 1970
Cfr10I	RCCGGY	5 cut(s)	68, 407, 743, 1144, 1394
Cfr13I	GGNCC	7 cut(s)	906, 1298, 1650, 1698, 1699, 1824, 1848
ClaI	ATCGAT	1 cut(s)	2574
CsiI	ACCWGGT	1 cut(s)	972
Csp6I	GTAC	7 cut(s)	361, 453, 751, 880, 912, 1142, 1932
CspAI	ACCGGT	1 cut(s)	1144
CspCI	CAANNNNNGTGG	4 cut(s)	391, 426, 694, 729
CviQI	GTAC	7 cut(s)	361, 453, 751, 880, 912, 1142, 1932
DdeI	CTNAG	9 cut(s)	446, 471, 482, 721, 794, 1511, 1798, 1829, 2127
DrdI	GACNNNNNNGTC	2 cut(s)	1513, 2131
DriI	GACNNNNNGTC	1 cut(s)	1460
DseDI	GACNNNNNNGTC	2 cut(s)	1513, 2131
EaeI	YGGCCR	3 cut(s)	66, 1618, 2366
EagI	CGGCCG	1 cut(s)	2366
Eam1104I	CTCTTC	3 cut(s)	130, 867, 1869
Eam1105I	GACNNNNNGTC	1 cut(s)	1460
EarI	CTCTTC	3 cut(s)	130, 867, 1869
EciI	GGCGGA	1 cut(s)	1311
EclXI	CGGCCG	1 cut(s)	2366
Eco130I	CCWWGG	5 cut(s)	246, 619, 1014, 1851, 1868
Eco24I	GRGCYC	1 cut(s)	1702
Eco32I	GATATC	1 cut(s)	2090
Eco47I	GGWCC	4 cut(s)	906, 1298, 1824, 1848
Eco47III	AGCGCT	1 cut(s)	811
Eco52I	CGGCCG	1 cut(s)	2366
Eco57I	CTGAAG	1 cut(s)	1956
Eco72I	CACGTG	1 cut(s)	1820
Eco81I	CCTNAGG	1 cut(s)	1511
Eco88I	CYCGRG	2 cut(s)	1307, 1430
Eco91I	GGTNACC	1 cut(s)	1515
EcoO109I	RGGNCCY	2 cut(s)	1698, 1824
EcoO65I	GGTNACC	1 cut(s)	1515
EcoRI	GAATTC	2 cut(s)	293, 488
EcoRII	CCWGG	5 cut(s)	319, 546, 758, 938, 972
EcoRV	GATATC	1 cut(s)	2090
EcoT14I	CCWWGG	5 cut(s)	246, 619, 1014, 1851, 1868
EcoT38I	GRGCYC	1 cut(s)	1702
ErhI	CCWWGG	5 cut(s)	246, 619, 1014, 1851, 1868
Esp3I	CGTCTC	1 cut(s)	467
FalI	AAGNNNNNCTT	2 cut(s)	2244, 2276
FaqI	GGGAC	6 cut(s)	185, 643, 919, 1145, 1837, 2566
FauI	CCCGC	1 cut(s)	1332
FbaI	TGATCA	4 cut(s)	1834, 2263, 2440, 2478
FblI	GTMKAC	3 cut(s)	459, 1370, 1626
Fnu4HI	GCNGC	7 cut(s)	121, 253, 615, 718, 813, 1569, 1902
FokI	GGATG	8 cut(s)	82, 199, 320, 800, 1289, 1501, 2360, 2522
FriOI	GRGCYC	1 cut(s)	1702
Fsp4HI	GCNGC	7 cut(s)	121, 253, 615, 718, 813, 1569, 1902
FspBI	CTAG	6 cut(s)	633, 1350, 2222, 2226, 2499, 2505
GlaI	GCGC	4 cut(s)	211, 811, 1742, 1969
GluI	GCNGC	7 cut(s)	121, 253, 615, 718, 813, 1569, 1902
GsaI	CCCAGC	3 cut(s)	356, 546, 2233
GsuI	CTGGAG	1 cut(s)	707
HaeII	RGCGCY	1 cut(s)	813
HaeIII	GGCC	9 cut(s)	68, 324, 891, 1409, 1620, 1652, 1700, 2185, 2368
HapII	CCGG	9 cut(s)	69, 129, 408, 744, 892, 1145, 1395, 1846, 2550
HhaI	GCGC	4 cut(s)	212, 812, 1743, 1970
Hin1I	GRCGYC	2 cut(s)	1337, 2113
Hin6I	GCGC	4 cut(s)	210, 810, 1741, 1968
HinP1I	GCGC	4 cut(s)	210, 810, 1741, 1968
HincII	GTYRAC	6 cut(s)	499, 1371, 1500, 2117, 2275, 2547
HindII	GTYRAC	6 cut(s)	499, 1371, 1500, 2117, 2275, 2547
HpaII	CCGG	9 cut(s)	69, 129, 408, 744, 892, 1145, 1395, 1846, 2550
Hpy99I	CGWCG	3 cut(s)	776, 1342, 2115
HpyCH4III	ACNGT	6 cut(s)	48, 139, 237, 457, 1068, 1955
HpyCH4IV	ACGT	9 cut(s)	359, 366, 708, 1337, 1496, 1819, 1959, 2113, 2139
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 514, 753, 1202, 1293, 1391, 2311
HpyF3I	CTNAG	9 cut(s)	446, 471, 482, 721, 794, 1511, 1798, 1829, 2127
HpySE526I	ACGT	9 cut(s)	359, 366, 708, 1337, 1496, 1819, 1959, 2113, 2139
Hsp92I	GRCGYC	2 cut(s)	1337, 2113
HspAI	GCGC	4 cut(s)	210, 810, 1741, 1968
KflI	GGGWCCC	1 cut(s)	1824
KroI	GCCGGC	1 cut(s)	68
KroNI	GCCGGC	1 cut(s)	70
Ksp22I	TGATCA	4 cut(s)	1834, 2263, 2440, 2478
LguI	GCTCTTC	1 cut(s)	130
LmnI	GCTCC	2 cut(s)	871, 987
Lsp1109I	GCAGC	5 cut(s)	264, 626, 729, 799, 1913
LweI	GCATC	3 cut(s)	221, 1228, 2297
MabI	ACCWGGT	1 cut(s)	972
MaeI	CTAG	6 cut(s)	633, 1350, 2222, 2226, 2499, 2505
MaeII	ACGT	9 cut(s)	359, 366, 708, 1337, 1496, 1819, 1959, 2113, 2139
MaeIII	GTNAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
MbiI	CCGCTC	2 cut(s)	381, 683
MflI	RGATCY	2 cut(s)	763, 955
MhlI	GDGCHC	1 cut(s)	1702
MlsI	TGGCCA	1 cut(s)	1620
MluNI	TGGCCA	1 cut(s)	1620
MlyI	GAGTC	4 cut(s)	83, 529, 1366, 1614
MmeI	TCCRAC	2 cut(s)	1320, 1582
Mox20I	TGGCCA	1 cut(s)	1620
MroNI	GCCGGC	1 cut(s)	68
MscI	TGGCCA	1 cut(s)	1620
MseI	TTAA	6 cut(s)	114, 567, 1055, 1182, 1272, 1595
MslI	CAYNNNNRTG	7 cut(s)	587, 746, 990, 1658, 2069, 2305, 2450
Msp20I	TGGCCA	1 cut(s)	1620
MspA1I	CMGCKG	4 cut(s)	517, 651, 1061, 2189
MspI	CCGG	9 cut(s)	69, 129, 408, 744, 892, 1145, 1395, 1846, 2550
MspR9I	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
MvaI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
MvnI	CGCG	1 cut(s)	1073
MwoI	GCNNNNNNNGC	7 cut(s)	129, 514, 753, 1202, 1293, 1391, 2311
NaeI	GCCGGC	1 cut(s)	70
NciI	CCSGG	1 cut(s)	2551
NcoI	CCATGG	1 cut(s)	246
NgoMIV	GCCGGC	1 cut(s)	68
NheI	GCTAGC	2 cut(s)	2221, 2225
NmeAIII	GCCGAG	4 cut(s)	256, 590, 621, 1272
NmuCI	GTSAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
NspI	RCATGY	1 cut(s)	751
OliI	CACNNNNGTG	2 cut(s)	1658, 2069
PagI	TCATGA	2 cut(s)	1710, 2248
PciSI	GCTCTTC	1 cut(s)	130
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PdiI	GCCGGC	1 cut(s)	70
PfeI	GAWTC	6 cut(s)	702, 849, 945, 1117, 1469, 2531
PflFI	GACNNNGTC	2 cut(s)	137, 1495
PflMI	CCANNNNNTGG	1 cut(s)	1020
PinAI	ACCGGT	1 cut(s)	1144
PkrI	GCNGC	7 cut(s)	122, 254, 616, 719, 814, 1570, 1903
PleI	GAGTC	4 cut(s)	82, 528, 1366, 1613
PmaCI	CACGTG	1 cut(s)	1820
PmlI	CACGTG	1 cut(s)	1820
PpsI	GAGTC	4 cut(s)	82, 528, 1366, 1613
Ppu21I	YACGTR	2 cut(s)	360, 1820
PpuMI	RGGWCCY	1 cut(s)	1824
Psp1406I	AACGTT	1 cut(s)	708
Psp5II	RGGWCCY	1 cut(s)	1824
Psp6I	CCWGG	5 cut(s)	319, 546, 758, 938, 972
PspCI	CACGTG	1 cut(s)	1820
PspEI	GGTNACC	1 cut(s)	1515
PspFI	CCCAGC	3 cut(s)	352, 542, 2229
PspGI	CCWGG	5 cut(s)	319, 546, 758, 938, 972
PspOMI	GGGCCC	1 cut(s)	1698
PspPI	GGNCC	7 cut(s)	906, 1298, 1650, 1698, 1699, 1824, 1848
PspPPI	RGGWCCY	1 cut(s)	1824
PstNI	CAGNNNCTG	1 cut(s)	1934
PsuI	RGATCY	2 cut(s)	763, 955
PsyI	GACNNNGTC	2 cut(s)	137, 1495
PvuII	CAGCTG	2 cut(s)	1061, 2189
RsaI	GTAC	7 cut(s)	362, 454, 752, 881, 913, 1143, 1933
RsaNI	GTAC	7 cut(s)	361, 453, 751, 880, 912, 1142, 1932
RseI	CAYNNNNRTG	7 cut(s)	587, 746, 990, 1658, 2069, 2305, 2450
SalI	GTCGAC	1 cut(s)	1369
SapI	GCTCTTC	1 cut(s)	130
SaqAI	TTAA	6 cut(s)	114, 567, 1055, 1182, 1272, 1595
SatI	GCNGC	7 cut(s)	121, 253, 615, 718, 813, 1569, 1902
Sau96I	GGNCC	7 cut(s)	906, 1298, 1650, 1698, 1699, 1824, 1848
SchI	GAGTC	4 cut(s)	83, 529, 1366, 1614
ScrFI	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
SduI	GDGCHC	1 cut(s)	1702
SexAI	ACCWGGT	1 cut(s)	972
SfaNI	GCATC	3 cut(s)	221, 1228, 2297
SfcI	CTRYAG	4 cut(s)	415, 951, 1092, 1126
SgrAI	CRCCGGYG	1 cut(s)	1394
SinI	GGWCC	4 cut(s)	906, 1298, 1824, 1848
SmiMI	CAYNNNNRTG	7 cut(s)	587, 746, 990, 1658, 2069, 2305, 2450
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
SpeI	ACTAGT	1 cut(s)	632
SspI	AATATT	1 cut(s)	1009
SspMI	CTAG	6 cut(s)	633, 1350, 2222, 2226, 2499, 2505
StyD4I	CCNGG	6 cut(s)	319, 546, 758, 938, 972, 2549
StyI	CCWWGG	5 cut(s)	246, 619, 1014, 1851, 1868
TaaI	ACNGT	6 cut(s)	48, 139, 237, 457, 1068, 1955
TaiI	ACGT	9 cut(s)	362, 369, 711, 1340, 1499, 1822, 1962, 2116, 2142
TatI	WGTACW	1 cut(s)	452
TauI	GCSGC	2 cut(s)	123, 1571
TfiI	GAWTC	6 cut(s)	702, 849, 945, 1117, 1469, 2531
Tru1I	TTAA	6 cut(s)	114, 567, 1055, 1182, 1272, 1595
Tru9I	TTAA	6 cut(s)	114, 567, 1055, 1182, 1272, 1595
TscAI	CASTG	5 cut(s)	240, 868, 1557, 1837, 2524
TseFI	GTSAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
TseI	GCWGC	5 cut(s)	252, 614, 717, 812, 1901
Tsp45I	GTSAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
TspDTI	ATGAA	9 cut(s)	4, 17, 322, 750, 1033, 1677, 1699, 2136, 2265
TspGWI	ACGGA	3 cut(s)	388, 1168, 1730
TspRI	CASTG	5 cut(s)	240, 868, 1557, 1837, 2524
Tth111I	GACNNNGTC	2 cut(s)	137, 1495
Van91I	CCANNNNNTGG	1 cut(s)	1020
VpaK11BI	GGWCC	4 cut(s)	906, 1298, 1824, 1848
XapI	RAATTY	4 cut(s)	293, 488, 802, 2318
XbaI	TCTAGA	1 cut(s)	1349
XceI	RCATGY	1 cut(s)	751
XcmI	CCANNNNNNNNNTGG	2 cut(s)	364, 1866
XmiI	GTMKAC	3 cut(s)	459, 1370, 1626
XspI	CTAG	6 cut(s)	633, 1350, 2222, 2226, 2499, 2505
ZraI	GACGTC	2 cut(s)	1338, 2114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.