Rorug02G0514700

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
64588112 .. 64591460
3349 bp
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UTR
Exon/CDS
Intron
Rorug02G0514700.1

Sequence Viewer

Length: 1512 bp
ATGGCACCGCCAATAATGTTGTTGCTTCTCCTAGCTTCGTTCTTGATTCCAACGCAGACCCAATTCCAAGTCGAAGCCAAAGACCAGGCCTTTACCTCCATAGTCATATCCCAAAAGGGTCTTGATTTTCTTAAGGAATTGCTGGTGACCGAAGCTGTGTCTTCCATAATTCCACTCCAAGTTCCCCAAATTAAGAAATCGATGAGGGTCCCGTTTCTGGGGAGTGTTTATATGGTGGTTTCGAATATCACAATCTATGGAATCGATGTGGGTTCGTCTTATATCAAGCTGGGTGATGATGGGATTGCTATTATTGCTTCGGAGACGACTTGTAATTTGAGCATGAATTGGTATTATTCGTATAGTACTTGGGTTGCGCCGGTTGAGGTTTCCGATGAAGGCAGTGCCTCTGTAAAGGTTGAAGGCGTGGAAGTTGGGCTTACATTAGGCTTGGGGATCCAAGAAGGAACTCTGAAGCTTTCCCTGAAGGACTGTGGTTGTCATGTTAAGGAGATTTCCATAAAATTGGATGGAGGAGCCTCTTGGTTTTATCAAGGGATGATTAATGCATTTGAAGAACAAATAGGATCTGCAGTGGAAAATTCTATCACCAAAAAACTTAAAGATGGAATTGTAAAGCTCGATTCAGTTCTGCAAGCTCTTCCAAAGGAAATCCCATTAGATGATGATACTTATTTGAATGCAACTTTTGTAAATGACCCAGTTTTGAGTAATTCTTCCATAGGATTTGAGATTAATGGTTTATTTACTGCACGAAGAAAGCCTTCAGTCTTTGAGTACCATAACAAGGATTCAAAAGCATTAGTTGCATGCTCGGATCCATCTAAAATGCTTGGAATAGCATTGGATGAGGCTGTGTTTAACTCTGTAGCAGCCACATACTTTGATGCAGAATTTATGCAATGGACTGTGGACAAGATACCAGATCAGTCTTTTTTGAACACTGCTGGATGGAGATTCATTATTCCCCAACTATACAAGAAATACCCAAACCATGATATGAACTTGAATATTTCTTTATCTTCTCCACCAGTCATAAAGATCTCAGAGCATAATATTGGTGCTATCATCTATGCTGACCTGATCATTGATGTATTGGACGAAAACAGTGTAATACCAGTTGCATGCATCTCATTGGTCATTCGTGCATCAAGTTCAGTTAAACTCTCGGGCAATAACCTTGCCGGCAGCATGAAAGTGGATGACTTTTCTATGTCATTGAAGTGGAGCAATATTGGCAATCTTCGCATGTATCTCATTCAGCCGGTGGTTTGGACGGTCATTCAGACTGTTTTTGTGCCATATGTGAACTCACACCTCGGAAAGGGAATCCCACTACCAATCGTTCACGGATTCACCATTCAGAATGGCGAACTACTCTGCTCGGGTTCAAAAATTATGGTTTGCAGCGACGTGACATACGAACCATCAGATTCACACAATCTTAATGCGTTCCTACAAAGTCTGTCTAAATACACTCATGCCACATAA

Protein Analysis

503

Amino Acids

55.07

Weight (kDa)

5.06

Isoelectric Point (pI)

32.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LBP_BPI_CETP PF01273 40 - 215 4.5e-23 LBP / BPI / CETP family, N-terminal domain
LBP_BPI_CETP_C PF02886 279 - 468 3.7e-28 LBP / BPI / CETP family, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AciI CCGC 1 cut(s) 8
AclWI GGATC 5 cut(s) 451, 464, 595, 833, 846
AcsI RAATTY 2 cut(s) 601, 914
AcuI CTGAAG 3 cut(s) 494, 506, 771
AfaI GTAC 2 cut(s) 367, 800
AfiI CCNNNNNNNGG 4 cut(s) 217, 218, 808, 1345
AflII CTTAAG 1 cut(s) 131
AgsI TTSAA 8 cut(s) 422, 575, 700, 816, 961, 1030, 1243, 1413
AjiI CACGTC 1 cut(s) 1435
AjnI CCWGG 1 cut(s) 84
AluBI AGCT 6 cut(s) 35, 155, 289, 478, 640, 659
AluI AGCT 6 cut(s) 35, 155, 289, 478, 640, 659
Alw26I GTCTC 1 cut(s) 317
AlwI GGATC 5 cut(s) 451, 464, 595, 833, 846
Ama87I CYCGRG 2 cut(s) 1189, 1405
AoxI GGCC 1 cut(s) 87
ApeKI GCWGC 3 cut(s) 893, 1209, 1428
ApoI RAATTY 2 cut(s) 601, 914
ArsI GACNNNNNNTTYG 2 cut(s) 319, 351
AseI ATTAAT 2 cut(s) 564, 756
Asp700I GAANNNNTTC 1 cut(s) 784
AspLEI GCGC 1 cut(s) 379
AspS9I GGNCC 1 cut(s) 208
AsuHPI GGTGA 4 cut(s) 157, 305, 601, 1369
AsuII TTCGAA 1 cut(s) 242
AvaI CYCGRG 2 cut(s) 1189, 1405
AvaII GGWCC 1 cut(s) 208
BamHI GGATCC 2 cut(s) 456, 838
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 1 cut(s) 153
BbvI GCAGC 3 cut(s) 905, 1221, 1440
BccI CCATC 6 cut(s) 293, 524, 620, 850, 966, 1456
BciT130I CCWGG 1 cut(s) 86
BclI TGATCA 1 cut(s) 1104
BcoDI GTCTC 1 cut(s) 317
BfaI CTAG 1 cut(s) 32
BfmI CTRYAG 2 cut(s) 591, 888
BfrI CTTAAG 1 cut(s) 131
BglII AGATCT 1 cut(s) 1062
BisI GCNGC 3 cut(s) 894, 1210, 1429
BlsI GCNGC 3 cut(s) 895, 1211, 1430
BmcAI AGTACT 1 cut(s) 367
Bme1390I CCNGG 1 cut(s) 86
Bme18I GGWCC 1 cut(s) 208
BmeT110I CYCGRG 2 cut(s) 1189, 1405
BmgBI CACGTC 1 cut(s) 1435
BmgT120I GGNCC 1 cut(s) 208
BmiI GGNNCC 6 cut(s) 6, 209, 210, 458, 538, 840
BmrFI CCNGG 1 cut(s) 86
BmrI ACTGGG 1 cut(s) 716
BmsI GCATC 3 cut(s) 898, 1158, 1178
BmuI ACTGGG 1 cut(s) 716
BpiI GAAGAC 1 cut(s) 153
Bpu14I TTCGAA 1 cut(s) 242
Bsa29I ATCGAT 2 cut(s) 200, 264
BsaJI CCNNGG 1 cut(s) 1339
Bsc4I CCNNNNNNNGG 4 cut(s) 217, 218, 808, 1345
Bse118I RCCGGY 3 cut(s) 379, 1205, 1285
Bse1I ACTGG 3 cut(s) 722, 1052, 1139
Bse3DI GCAATG 1 cut(s) 929
BseBI CCWGG 1 cut(s) 86
BseCI ATCGAT 2 cut(s) 200, 264
BseDI CCNNGG 1 cut(s) 1339
BseGI GGATG 5 cut(s) 535, 564, 874, 977, 1228
BseLI CCNNNNNNNGG 4 cut(s) 217, 218, 808, 1345
BseMI GCAATG 1 cut(s) 929
BseMII CTCAG 1 cut(s) 1080
BseNI ACTGG 3 cut(s) 722, 1052, 1139
BseRI GAGGAG 1 cut(s) 549
BseXI GCAGC 3 cut(s) 905, 1221, 1440
BseYI CCCAGC 1 cut(s) 289
BsgI GTGCAG 1 cut(s) 756
BshFI GGCC 1 cut(s) 89
BshNI GGYRCC 1 cut(s) 4
BshVI ATCGAT 2 cut(s) 200, 264
BsiHKCI CYCGRG 2 cut(s) 1189, 1405
BsiSI CCGG 3 cut(s) 380, 1206, 1286
BslFI GGGAC 1 cut(s) 194
BslI CCNNNNNNNGG 4 cut(s) 217, 218, 808, 1345
BsmAI GTCTC 1 cut(s) 317
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 1 cut(s) 194
BsmI GAATGC 1 cut(s) 706
BsnI GGCC 1 cut(s) 89
BsoBI CYCGRG 2 cut(s) 1189, 1405
Bsp119I TTCGAA 1 cut(s) 242
Bsp143I GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
BspACI CCGC 1 cut(s) 8
BspANI GGCC 1 cut(s) 89
BspCNI CTCAG 1 cut(s) 1079
BspDI ATCGAT 2 cut(s) 200, 264
BspLI GGNNCC 6 cut(s) 6, 209, 210, 458, 538, 840
BspMAI CTGCAG 1 cut(s) 595
BspPI GGATC 5 cut(s) 451, 464, 595, 833, 846
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 1 cut(s) 242
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 929
BsrFI RCCGGY 3 cut(s) 379, 1205, 1285
BsrI ACTGG 3 cut(s) 722, 1052, 1139
BssAI RCCGGY 3 cut(s) 379, 1205, 1285
BssECI CCNNGG 1 cut(s) 1339
BssMI GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
Bst2UI CCWGG 1 cut(s) 86
Bst4CI ACNGT 5 cut(s) 494, 931, 1130, 1300, 1312
Bst6I CTCTTC 1 cut(s) 666
BstAFI CTTAAG 1 cut(s) 131
BstAPI GCANNNNNTGC 1 cut(s) 827
BstBI TTCGAA 1 cut(s) 242
BstC8I GCNNGC 4 cut(s) 657, 832, 1147, 1207
BstDEI CTNAG 1 cut(s) 1066
BstEII GGTNACC 1 cut(s) 145
BstENI CCTNNNNNAGG 1 cut(s) 1343
BstF5I GGATG 5 cut(s) 535, 564, 874, 977, 1228
BstHHI GCGC 1 cut(s) 379
BstKTI GATC 6 cut(s) 459, 590, 841, 949, 1065, 1107
BstMAI GTCTC 1 cut(s) 317
BstMBI GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
BstMWI GCNNNNNNNGC 4 cut(s) 314, 827, 1257, 1266
BstNI CCWGG 1 cut(s) 86
BstNSI RCATGY 3 cut(s) 834, 1149, 1273
BstPI GGTNACC 1 cut(s) 145
BstSCI CCNGG 1 cut(s) 84
BstSFI CTRYAG 2 cut(s) 591, 888
BstV1I GCAGC 3 cut(s) 905, 1221, 1440
BstV2I GAAGAC 1 cut(s) 153
BstX2I RGATCY 4 cut(s) 456, 587, 838, 1062
BstXI CCANNNNNNTGG 1 cut(s) 526
BstYI RGATCY 4 cut(s) 456, 587, 838, 1062
Bsu15I ATCGAT 2 cut(s) 200, 264
BsuRI GGCC 1 cut(s) 89
BsuTUI ATCGAT 2 cut(s) 200, 264
BtrI CACGTC 1 cut(s) 1435
BtsCI GGATG 5 cut(s) 535, 564, 874, 977, 1228
BtsI GCAGTG 3 cut(s) 409, 600, 963
BtsIMutI CAGTG 4 cut(s) 409, 600, 963, 1135
Cac8I GCNNGC 4 cut(s) 657, 832, 1147, 1207
CfoI GCGC 1 cut(s) 379
Cfr10I RCCGGY 3 cut(s) 379, 1205, 1285
Cfr13I GGNCC 1 cut(s) 208
ClaI ATCGAT 2 cut(s) 200, 264
Csp6I GTAC 2 cut(s) 366, 799
CspCI CAANNNNNGTGG 2 cut(s) 886, 921
CviAII CATG 8 cut(s) 343, 503, 831, 1016, 1146, 1213, 1270, 1502
CviQI GTAC 2 cut(s) 366, 799
DdeI CTNAG 1 cut(s) 1066
DpnI GATC 6 cut(s) 458, 589, 840, 948, 1064, 1106
DpnII GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
Eco147I AGGCCT 1 cut(s) 89
Eco47I GGWCC 1 cut(s) 208
Eco57I CTGAAG 3 cut(s) 494, 506, 771
Eco88I CYCGRG 2 cut(s) 1189, 1405
Eco91I GGTNACC 1 cut(s) 145
EcoNI CCTNNNNNAGG 1 cut(s) 1343
EcoO109I RGGNCCY 1 cut(s) 208
EcoO65I GGTNACC 1 cut(s) 145
EcoRII CCWGG 1 cut(s) 84
EcoT22I ATGCAT 2 cut(s) 571, 1151
Esp3I CGTCTC 1 cut(s) 317
FaeI CATG 8 cut(s) 346, 506, 834, 1019, 1149, 1216, 1273, 1505
FalI AAGNNNNNCTT 4 cut(s) 423, 455, 769, 801
FaqI GGGAC 1 cut(s) 194
FatI CATG 8 cut(s) 342, 502, 830, 1015, 1145, 1212, 1269, 1501
FauNDI CATATG 1 cut(s) 1324
FbaI TGATCA 1 cut(s) 1104
Fnu4HI GCNGC 3 cut(s) 894, 1210, 1429
FokI GGATG 5 cut(s) 542, 571, 881, 984, 1235
Fsp4HI GCNGC 3 cut(s) 894, 1210, 1429
FspBI CTAG 1 cut(s) 32
GlaI GCGC 1 cut(s) 378
GluI GCNGC 3 cut(s) 894, 1210, 1429
GsaI CCCAGC 1 cut(s) 293
HaeIII GGCC 1 cut(s) 89
HapII CCGG 3 cut(s) 380, 1206, 1286
HhaI GCGC 1 cut(s) 379
Hin1II CATG 8 cut(s) 346, 506, 834, 1019, 1149, 1216, 1273, 1505
Hin6I GCGC 1 cut(s) 377
HinP1I GCGC 1 cut(s) 377
HindIII AAGCTT 1 cut(s) 476
HinfI GANTC 8 cut(s) 46, 261, 644, 812, 978, 1350, 1374, 1454
HpaII CCGG 3 cut(s) 380, 1206, 1286
HphI GGTGA 4 cut(s) 157, 305, 601, 1369
Hpy166II GTNNAC 3 cut(s) 934, 1330, 1369
Hpy188I TCNGA 9 cut(s) 322, 394, 474, 838, 1069, 1308, 1343, 1386, 1453
Hpy188III TCNNGA 2 cut(s) 43, 122
Hpy8I GTNNAC 3 cut(s) 934, 1330, 1369
Hpy99I CGWCG 1 cut(s) 1436
HpyAV CCTTC 5 cut(s) 392, 416, 458, 481, 795
HpyCH4III ACNGT 5 cut(s) 494, 931, 1130, 1300, 1312
HpyCH4IV ACGT 1 cut(s) 1434
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 827, 1257, 1266
HpyF3I CTNAG 1 cut(s) 1066
HpySE526I ACGT 1 cut(s) 1434
Hsp92II CATG 8 cut(s) 346, 506, 834, 1019, 1149, 1216, 1273, 1505
HspAI GCGC 1 cut(s) 377
KflI GGGWCCC 1 cut(s) 208
KroI GCCGGC 1 cut(s) 1205
KroNI GCCGGC 1 cut(s) 1207
Ksp22I TGATCA 1 cut(s) 1104
Kzo9I GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 2 cut(s) 536, 1248
Lsp1109I GCAGC 3 cut(s) 905, 1221, 1440
LweI GCATC 3 cut(s) 898, 1158, 1178
MaeI CTAG 1 cut(s) 32
MaeII ACGT 1 cut(s) 1434
MaeIII GTNAC 2 cut(s) 145, 1435
MalI GATC 6 cut(s) 458, 589, 840, 948, 1064, 1106
MboI GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
MboII GAAGA 7 cut(s) 153, 587, 653, 729, 789, 1035, 1256
MflI RGATCY 4 cut(s) 456, 587, 838, 1062
MmeI TCCRAC 1 cut(s) 74
MnlI CCTC 8 cut(s) 106, 198, 379, 418, 527, 550, 865, 1349
Mph1103I ATGCAT 2 cut(s) 571, 1151
MroNI GCCGGC 1 cut(s) 1205
MroXI GAANNNNTTC 1 cut(s) 784
MseI TTAA 9 cut(s) 132, 192, 507, 564, 621, 756, 882, 1182, 1467
MslI CAYNNNNRTG 2 cut(s) 1217, 1243
MspCI CTTAAG 1 cut(s) 131
MspI CCGG 3 cut(s) 380, 1206, 1286
MspR9I CCNGG 1 cut(s) 86
Mva1269I GAATGC 1 cut(s) 706
MvaI CCWGG 1 cut(s) 86
MwoI GCNNNNNNNGC 4 cut(s) 314, 827, 1257, 1266
NaeI GCCGGC 1 cut(s) 1207
NdeI CATATG 1 cut(s) 1324
NdeII GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
NgoMIV GCCGGC 1 cut(s) 1205
NlaIII CATG 8 cut(s) 346, 506, 834, 1019, 1149, 1216, 1273, 1505
NlaIV GGNNCC 6 cut(s) 6, 209, 210, 458, 538, 840
NmuCI GTSAC 2 cut(s) 145, 1435
NsiI ATGCAT 2 cut(s) 571, 1151
NspI RCATGY 3 cut(s) 834, 1149, 1273
NspV TTCGAA 1 cut(s) 242
PaeI GCATGC 2 cut(s) 834, 1149
PceI AGGCCT 1 cut(s) 89
PciSI GCTCTTC 1 cut(s) 666
PcsI WCGNNNNNNNCGW 1 cut(s) 1440
PctI GAATGC 1 cut(s) 706
PdiI GCCGGC 1 cut(s) 1207
PdmI GAANNNNTTC 1 cut(s) 784
PfeI GAWTC 8 cut(s) 46, 261, 644, 812, 978, 1350, 1374, 1454
PkrI GCNGC 3 cut(s) 895, 1211, 1430
PpuMI RGGWCCY 1 cut(s) 208
PshBI ATTAAT 2 cut(s) 564, 756
Psp5II RGGWCCY 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 84
PspEI GGTNACC 1 cut(s) 145
PspFI CCCAGC 1 cut(s) 289
PspGI CCWGG 1 cut(s) 84
PspN4I GGNNCC 6 cut(s) 6, 209, 210, 458, 538, 840
PspPI GGNCC 1 cut(s) 208
PspPPI RGGWCCY 1 cut(s) 208
PstI CTGCAG 1 cut(s) 595
PsuI RGATCY 4 cut(s) 456, 587, 838, 1062
RsaI GTAC 2 cut(s) 367, 800
RsaNI GTAC 2 cut(s) 366, 799
RseI CAYNNNNRTG 2 cut(s) 1217, 1243
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 9 cut(s) 132, 192, 507, 564, 621, 756, 882, 1182, 1467
SatI GCNGC 3 cut(s) 894, 1210, 1429
Sau3AI GATC 6 cut(s) 456, 587, 838, 946, 1062, 1104
Sau96I GGNCC 1 cut(s) 208
ScaI AGTACT 1 cut(s) 367
ScrFI CCNGG 1 cut(s) 86
SfaNI GCATC 3 cut(s) 898, 1158, 1178
SfcI CTRYAG 2 cut(s) 591, 888
SfuI TTCGAA 1 cut(s) 242
SinI GGWCC 1 cut(s) 208
SmiMI CAYNNNNRTG 2 cut(s) 1217, 1243
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
SphI GCATGC 2 cut(s) 834, 1149
SseBI AGGCCT 1 cut(s) 89
SsiI CCGC 1 cut(s) 8
SspI AATATT 3 cut(s) 1033, 1078, 1255
SspMI CTAG 1 cut(s) 32
StuI AGGCCT 1 cut(s) 89
StyD4I CCNGG 1 cut(s) 84
TaaI ACNGT 5 cut(s) 494, 931, 1130, 1300, 1312
TaiI ACGT 1 cut(s) 1437
TaqI TCGA 5 cut(s) 72, 200, 242, 264, 642
TaqII GACCGA 1 cut(s) 164
TatI WGTACW 1 cut(s) 365
TfiI GAWTC 8 cut(s) 46, 261, 644, 812, 978, 1350, 1374, 1454
Tru1I TTAA 9 cut(s) 132, 192, 507, 564, 621, 756, 882, 1182, 1467
Tru9I TTAA 9 cut(s) 132, 192, 507, 564, 621, 756, 882, 1182, 1467
TscAI CASTG 4 cut(s) 409, 600, 970, 1135
TseFI GTSAC 2 cut(s) 145, 1435
TseI GCWGC 3 cut(s) 893, 1209, 1428
Tsp45I GTSAC 2 cut(s) 145, 1435
TspDTI ATGAA 5 cut(s) 359, 411, 970, 1037, 1229
TspGWI ACGGA 1 cut(s) 1386
TspRI CASTG 4 cut(s) 409, 600, 970, 1135
Vha464I CTTAAG 1 cut(s) 131
VpaK11BI GGWCC 1 cut(s) 208
VspI ATTAAT 2 cut(s) 564, 756
XagI CCTNNNNNAGG 1 cut(s) 1343
XapI RAATTY 2 cut(s) 601, 914
XceI RCATGY 3 cut(s) 834, 1149, 1273
XmnI GAANNNNTTC 1 cut(s) 784
XspI CTAG 1 cut(s) 32
ZrmI AGTACT 1 cut(s) 367
Zsp2I ATGCAT 2 cut(s) 571, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.