Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0030898.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

94 .. 2175

Gene Structure 2082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0030898.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

atgcccaccagtttttactacaccgcaggcgaaagccaagggattcggaatgtaggcaacgaacaaaactattacattgaaaacagcacagctctggagatggtgtaccgaatcaacgtcggcggaggctccatcccgccggtcgaagacaccggaatgtaccggtattgggactcccccgacaatacctatttggattatgtgagtagagaattcagcgtactaccacagaacagtacaatcgagctcaactttgtcgaagttccagaatactctgccccaaaagcagtttacacaaccggtcggtcaatggggatgaacaaaaccatcaacaagagctataacctcacatgggtatttcccttagatcccaagtttaattacctggtgagactccatttctgtgagtttgaatctaatattaccaagtacggagatcgatcgtttcaaatctacatggccaaccaaatcgcagaaaaacttgcagatgtcatcggatggagtaaagcaaatgggaatccagtttacagagactacgttgtgggaatgttcacgtctccggttggaagcgagaagaaagttaacctctctctagtactctcagcgctacagagagactcgtatactaaatacaacgatggcatcttgaacgggctagaaatcttcaagctcagtgacccgagtcggaatctcgccggacccaaccccgacccacctccgttgataccaccaaagataccatcgaagagacccagtaagaaaaagtctactcctatggcagctattatcgcaggcgtagtttccgggttacttatgctctctgttctcggtttctttgttctccgaagagggagaaaggccaaggactatagctcaagtcaagtaaagtggggtctgctttctttttcaacgactactaagtccaccacgtcttacggttcatctctgccgtccgagctgtgtcatcacttttcattggtggagatcagagcagccacgcaaaactttgatgattcgaacgttattgggcgtggcgggtttggtaacgtgtacaaaggtaccatcaacggtgcgtccaccccctttgcgatcaaacggctgaaagcagagtcgtcacagggtgcccttgagttcaagacggagatcgaattgctctcccaactgcgtcacgtccatctcgtgtctctggtcgggtactgtgacgacaacggtgagatgattttggtgtatgactatatggaaaatgggaccctacgcgatcatttgtacaactctgaaaatccacctcttccttgggaacaaaggcttcaagtttgtattggtgccgcgcgtgggttgcactaccttcacactggtgtcaagtgtatgatcattcaccgagacgtgaagagcaccaacatcttgttggacgataaatgggtggccaaggtcgctgatttcgggttgtcaaaaatgggcacgaccaccatgtctaagacccacattagcaccatggttaagggtagttttggttatctcgacccagagtactaccgtcgtcaacagttgactgagaagtctgatgtgtactcatttggcgtagtattgtgtgaggtgttgtgtgctaggccggctttgatccgtacagcggataagaagcaaatgaacctagctgcatggtttaagacctgtcatggaaacggaacacttgaccaaatcattgacccgaatttgaggggtaagattgtaaatgagtgtttgaacaagtttgttgaaattgcaattagttgtatgaatgataatgggagtgaacgaccgtccatgaatgatgttatatgggcgcttgattgtgcattaaaacttcaacagaccgcagagggttcggatttggatttcaatgccgggaagaagggtgaagatgaggcttcagtgctgaatgatagtgatgcagggtttagtggcacatgggaagactcgtcaggttccaagaacagcagggtgaccaaaactagtagtagttaccaaaatactactgctagtgattccattaaagggctgtcaggtacagtcttctccgagatctacgatcccaatggaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

693

Amino Acids

76.95

Weight (kDa)

6.84

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	919, 1468, 1555
Acc65I	GGTACC	1 cut(s)	1058
AccB1I	GGYRCC	3 cut(s)	1058, 1121, 1322
AccI	GTMKAC	2 cut(s)	623, 767
AccII	CGCG	3 cut(s)	1257, 1328, 1330
AciI	CCGC	7 cut(s)	24, 123, 137, 1035, 1326, 1628, 1851
AclI	AACGTT	1 cut(s)	1020
AclWI	GGATC	3 cut(s)	362, 1612, 2060
AcoI	YGGCCR	2 cut(s)	459, 1422
AcsI	RAATTY	2 cut(s)	212, 1708
AcuI	CTGAAG	1 cut(s)	1890
AdeI	CACNNNGTG	1 cut(s)	1121
AfeI	AGCGCT	1 cut(s)	606
AfiI	CCNNNNNNNGG	5 cut(s)	169, 352, 1332, 1627, 2031
AflIII	ACRYGT	1 cut(s)	1047
AgeI	ACCGGT	2 cut(s)	162, 299
AhlI	ACTAGT	1 cut(s)	1988
AjiI	CACGTC	4 cut(s)	555, 930, 1171, 1384
AjnI	CCWGG	1 cut(s)	384
AleI	CACNNNNGTG	1 cut(s)	1353
AluBI	AGCT	8 cut(s)	92, 247, 339, 670, 782, 873, 958, 1652
AluI	AGCT	8 cut(s)	92, 247, 339, 670, 782, 873, 958, 1652
Alw21I	GWGCWC	2 cut(s)	249, 1394
Alw26I	GTCTC	7 cut(s)	385, 525, 561, 609, 742, 1188, 1374
AlwI	GGATC	3 cut(s)	362, 1612, 2060
Ama87I	CYCGRG	1 cut(s)	679
Aor51HI	AGCGCT	1 cut(s)	606
AoxI	GGCC	4 cut(s)	459, 858, 1422, 1607
ApeKI	GCWGC	3 cut(s)	779, 992, 1652
ApoI	RAATTY	2 cut(s)	212, 1708
AsiGI	ACCGGT	2 cut(s)	162, 299
Asp718I	GGTACC	1 cut(s)	1058
AspLEI	GCGC	3 cut(s)	607, 1330, 1822
AspS9I	GGNCC	2 cut(s)	698, 1248
AsuC2I	CCSGG	2 cut(s)	805, 1882
AsuHPI	GGTGA	5 cut(s)	400, 1223, 1367, 1904, 1990
AsuII	TTCGAA	1 cut(s)	1016
AvaI	CYCGRG	1 cut(s)	679
AvaII	GGWCC	2 cut(s)	698, 1248
BaeGI	GKGCMC	2 cut(s)	1126, 1460
BaeI	ACNNNNGTAYC	2 cut(s)	1042, 1075
BalI	TGGCCA	2 cut(s)	461, 1424
BanI	GGYRCC	3 cut(s)	1058, 1121, 1322
BanII	GRGCYC	1 cut(s)	249
BauI	CACGAG	1 cut(s)	1178
BbsI	GAAGAC	3 cut(s)	153, 1956, 2041
Bbv12I	GWGCWC	2 cut(s)	249, 1394
BbvI	GCAGC	3 cut(s)	791, 1004, 1639
BccI	CCATC	8 cut(s)	94, 140, 335, 492, 632, 748, 1070, 1182
BceAI	ACGGC	2 cut(s)	934, 1112
BcgI	CGANNNNNNTGC	2 cut(s)	1842, 1876
BciT130I	CCWGG	1 cut(s)	386
BclI	TGATCA	1 cut(s)	1368
BcnI	CCSGG	2 cut(s)	805, 1882
BcoDI	GTCTC	7 cut(s)	385, 525, 561, 609, 742, 1188, 1374
BcuI	ACTAGT	1 cut(s)	1988
BfaI	CTAG	6 cut(s)	593, 656, 1605, 1649, 1989, 2016
BfmI	CTRYAG	2 cut(s)	608, 868
BfoI	RGCGCY	2 cut(s)	608, 1823
BglII	AGATCT	1 cut(s)	2058
BisI	GCNGC	4 cut(s)	780, 993, 1326, 1653
BlsI	GCNGC	4 cut(s)	781, 994, 1327, 1654
BmcAI	AGTACT	2 cut(s)	597, 1529
Bme1390I	CCNGG	3 cut(s)	386, 805, 1882
Bme18I	GGWCC	2 cut(s)	698, 1248
BmeT110I	CYCGRG	1 cut(s)	679
BmgBI	CACGTC	4 cut(s)	555, 930, 1171, 1384
BmgT120I	GGNCC	2 cut(s)	698, 1248
BmiI	GGNNCC	8 cut(s)	130, 700, 1060, 1123, 1249, 1250, 1324, 1963
BmrFI	CCNGG	3 cut(s)	386, 805, 1882
BmrI	ACTGGG	1 cut(s)	747
BmsI	GCATC	2 cut(s)	651, 1915
BmuI	ACTGGG	1 cut(s)	747
BoxI	GACNNNNGTC	1 cut(s)	681
BpiI	GAAGAC	3 cut(s)	153, 1956, 2041
BpmI	CTGGAG	1 cut(s)	116
Bpu14I	TTCGAA	1 cut(s)	1016
BpuEI	CTTGAG	2 cut(s)	859, 1148
BpuMI	CCSGG	2 cut(s)	805, 1882
Bsa29I	ATCGAT	1 cut(s)	439
BsaI	GGTCTC	1 cut(s)	742
BsaJI	CCNNGG	5 cut(s)	37, 861, 1292, 1425, 1491
BsaWI	WCCGGW	4 cut(s)	152, 162, 299, 559
BsaXI	ACNNNNNCTCC	2 cut(s)	89, 119
Bsc4I	CCNNNNNNNGG	5 cut(s)	169, 352, 1332, 1627, 2031
Bse118I	RCCGGY	4 cut(s)	139, 162, 299, 1609
Bse1I	ACTGG	4 cut(s)	9, 521, 753, 1357
BseBI	CCWGG	1 cut(s)	386
BseCI	ATCGAT	1 cut(s)	439
BseDI	CCNNGG	5 cut(s)	37, 861, 1292, 1425, 1491
BseGI	GGATG	3 cut(s)	132, 321, 503
BseLI	CCNNNNNNNGG	5 cut(s)	169, 352, 1332, 1627, 2031
BseMII	CTCAG	3 cut(s)	615, 685, 1542
BseNI	ACTGG	4 cut(s)	9, 521, 753, 1357
BseSI	GKGCMC	2 cut(s)	1126, 1460
BseXI	GCAGC	3 cut(s)	791, 1004, 1639
Bsh1236I	CGCG	3 cut(s)	1257, 1328, 1330
Bsh1285I	CGRYCG	4 cut(s)	144, 304, 443, 1796
BshFI	GGCC	4 cut(s)	461, 860, 1424, 1609
BshNI	GGYRCC	3 cut(s)	1058, 1121, 1322
BshTI	ACCGGT	2 cut(s)	162, 299
BshVI	ATCGAT	1 cut(s)	439
BsiEI	CGRYCG	4 cut(s)	144, 304, 443, 1796
BsiHKAI	GWGCWC	2 cut(s)	249, 1394
BsiHKCI	CYCGRG	1 cut(s)	679
BsiSI	CCGG	9 cut(s)	140, 153, 163, 300, 560, 696, 804, 1610, 1881
BslFI	GGGAC	2 cut(s)	185, 1261
BslI	CCNNNNNNNGG	5 cut(s)	169, 352, 1332, 1627, 2031
BsmAI	GTCTC	7 cut(s)	385, 525, 561, 609, 742, 1188, 1374
BsmBI	CGTCTC	2 cut(s)	561, 1374
BsmFI	GGGAC	2 cut(s)	185, 1261
BsnI	GGCC	4 cut(s)	461, 860, 1424, 1609
Bso31I	GGTCTC	1 cut(s)	742
BsoBI	CYCGRG	1 cut(s)	679
Bsp119I	TTCGAA	1 cut(s)	1016
Bsp1286I	GDGCHC	4 cut(s)	249, 1126, 1394, 1460
Bsp1407I	TGTACA	2 cut(s)	1050, 1266
Bsp19I	CCATGG	1 cut(s)	1491
BspACI	CCGC	7 cut(s)	24, 123, 137, 1035, 1326, 1628, 1851
BspANI	GGCC	4 cut(s)	461, 860, 1424, 1609
BspCNI	CTCAG	3 cut(s)	614, 684, 1543
BspDI	ATCGAT	1 cut(s)	439
BspFNI	CGCG	3 cut(s)	1257, 1328, 1330
BspLI	GGNNCC	8 cut(s)	130, 700, 1060, 1123, 1249, 1250, 1324, 1963
BspPI	GGATC	3 cut(s)	362, 1612, 2060
BspQI	GCTCTTC	1 cut(s)	1382
BspT104I	TTCGAA	1 cut(s)	1016
BspT107I	GGYRCC	3 cut(s)	1058, 1121, 1322
BspTNI	GGTCTC	1 cut(s)	742
BsrFI	RCCGGY	4 cut(s)	139, 162, 299, 1609
BsrGI	TGTACA	2 cut(s)	1050, 1266
BsrI	ACTGG	4 cut(s)	9, 521, 753, 1357
BssAI	RCCGGY	4 cut(s)	139, 162, 299, 1609
BssECI	CCNNGG	5 cut(s)	37, 861, 1292, 1425, 1491
BssNAI	GTATAC	1 cut(s)	624
BssSI	CACGAG	1 cut(s)	1178
BssT1I	CCWWGG	5 cut(s)	37, 861, 1292, 1425, 1491
Bst1107I	GTATAC	1 cut(s)	624
Bst2BI	CACGAG	1 cut(s)	1178
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	9 cut(s)	236, 938, 1070, 1199, 1211, 1535, 1545, 1797, 2047
Bst6I	CTCTTC	4 cut(s)	740, 841, 1293, 1382
BstAUI	TGTACA	2 cut(s)	1050, 1266
BstBI	TTCGAA	1 cut(s)	1016
BstC8I	GCNNGC	3 cut(s)	28, 793, 1611
BstDEI	CTNAG	6 cut(s)	364, 601, 671, 918, 1473, 1551
BstDSI	CCRYGG	1 cut(s)	1491
BstEII	GGTNACC	1 cut(s)	1978
BstF5I	GGATG	3 cut(s)	132, 321, 503
BstFNI	CGCG	3 cut(s)	1257, 1328, 1330
BstH2I	RGCGCY	2 cut(s)	608, 1823
BstHHI	GCGC	3 cut(s)	607, 1330, 1822
BstMAI	GTCTC	7 cut(s)	385, 525, 561, 609, 742, 1188, 1374
BstMCI	CGRYCG	4 cut(s)	144, 304, 443, 1796
BstMWI	GCNNNNNNNGC	6 cut(s)	284, 788, 955, 1336, 1430, 1610
BstNI	CCWGG	1 cut(s)	386
BstPAI	GACNNNNGTC	1 cut(s)	681
BstPI	GGTNACC	1 cut(s)	1978
BstSCI	CCNGG	3 cut(s)	384, 803, 1880
BstSFI	CTRYAG	2 cut(s)	608, 868
BstSLI	GKGCMC	2 cut(s)	1126, 1460
BstUI	CGCG	3 cut(s)	1257, 1328, 1330
BstV1I	GCAGC	3 cut(s)	791, 1004, 1639
BstV2I	GAAGAC	3 cut(s)	153, 1956, 2041
BstX2I	RGATCY	2 cut(s)	367, 2058
BstYI	RGATCY	2 cut(s)	367, 2058
BstZ17I	GTATAC	1 cut(s)	624
Bsu15I	ATCGAT	1 cut(s)	439
BsuRI	GGCC	4 cut(s)	461, 860, 1424, 1609
BsuTUI	ATCGAT	1 cut(s)	439
BtgI	CCRYGG	1 cut(s)	1491
BtrI	CACGTC	4 cut(s)	555, 930, 1171, 1384
BtsCI	GGATG	3 cut(s)	132, 321, 503
BtsIMutI	CAGTG	3 cut(s)	679, 1350, 1914
Cac8I	GCNNGC	3 cut(s)	28, 793, 1611
CfoI	GCGC	3 cut(s)	607, 1330, 1822
Cfr10I	RCCGGY	4 cut(s)	139, 162, 299, 1609
Cfr13I	GGNCC	2 cut(s)	698, 1248
ClaI	ATCGAT	1 cut(s)	439
CseI	GACGC	2 cut(s)	1062, 1154
CsiI	ACCWGGT	1 cut(s)	384
CspAI	ACCGGT	2 cut(s)	162, 299
CspCI	CAANNNNNGTGG	6 cut(s)	702, 737, 869, 904, 1066, 1101
CviAII	CATG	8 cut(s)	351, 457, 1468, 1492, 1656, 1673, 1801, 1944
DdeI	CTNAG	6 cut(s)	364, 601, 671, 918, 1473, 1551
DraIII	CACNNNGTG	1 cut(s)	1121
DrdI	GACNNNNNNGTC	3 cut(s)	919, 1468, 1555
DseDI	GACNNNNNNGTC	3 cut(s)	919, 1468, 1555
EaeI	YGGCCR	2 cut(s)	459, 1422
Eam1104I	CTCTTC	4 cut(s)	740, 841, 1293, 1382
EarI	CTCTTC	4 cut(s)	740, 841, 1293, 1382
EciI	GGCGGA	1 cut(s)	138
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	5 cut(s)	37, 861, 1292, 1425, 1491
Eco24I	GRGCYC	1 cut(s)	249
Eco31I	GGTCTC	1 cut(s)	742
Eco47I	GGWCC	2 cut(s)	698, 1248
Eco47III	AGCGCT	1 cut(s)	606
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	1 cut(s)	1890
Eco88I	CYCGRG	1 cut(s)	679
Eco91I	GGTNACC	1 cut(s)	1978
EcoICRI	GAGCTC	1 cut(s)	247
EcoO109I	RGGNCCY	1 cut(s)	1248
EcoO65I	GGTNACC	1 cut(s)	1978
EcoRI	GAATTC	1 cut(s)	212
EcoRII	CCWGG	1 cut(s)	384
EcoT14I	CCWWGG	5 cut(s)	37, 861, 1292, 1425, 1491
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	5 cut(s)	37, 861, 1292, 1425, 1491
Esp3I	CGTCTC	2 cut(s)	561, 1374
FaeI	CATG	8 cut(s)	354, 460, 1471, 1495, 1659, 1676, 1804, 1947
FaqI	GGGAC	2 cut(s)	185, 1261
FatI	CATG	8 cut(s)	350, 456, 1467, 1491, 1655, 1672, 1800, 1943
FauI	CCCGC	2 cut(s)	144, 1028
FbaI	TGATCA	1 cut(s)	1368
FblI	GTMKAC	2 cut(s)	623, 767
Fnu4HI	GCNGC	4 cut(s)	780, 993, 1326, 1653
FokI	GGATG	3 cut(s)	119, 328, 510
FriOI	GRGCYC	1 cut(s)	249
Fsp4HI	GCNGC	4 cut(s)	780, 993, 1326, 1653
FspBI	CTAG	6 cut(s)	593, 656, 1605, 1649, 1989, 2016
GlaI	GCGC	3 cut(s)	606, 1329, 1821
GluI	GCNGC	4 cut(s)	780, 993, 1326, 1653
GsuI	CTGGAG	1 cut(s)	116
HaeII	RGCGCY	2 cut(s)	608, 1823
HaeIII	GGCC	4 cut(s)	461, 860, 1424, 1609
HapII	CCGG	9 cut(s)	140, 153, 163, 300, 560, 696, 804, 1610, 1881
HgaI	GACGC	2 cut(s)	1062, 1154
HhaI	GCGC	3 cut(s)	607, 1330, 1822
Hin1II	CATG	8 cut(s)	354, 460, 1471, 1495, 1659, 1676, 1804, 1947
Hin6I	GCGC	3 cut(s)	605, 1328, 1820
HinP1I	GCGC	3 cut(s)	605, 1328, 1820
HincII	GTYRAC	3 cut(s)	583, 1541, 1548
HindII	GTYRAC	3 cut(s)	583, 1541, 1548
HpaI	GTTAAC	1 cut(s)	583
HpaII	CCGG	9 cut(s)	140, 153, 163, 300, 560, 696, 804, 1610, 1881
HphI	GGTGA	5 cut(s)	400, 1223, 1367, 1904, 1990
Hpy188III	TCNNGA	5 cut(s)	95, 266, 646, 1135, 1517
Hpy99I	CGWCG	2 cut(s)	122, 1539
HpyAV	CCTTC	2 cut(s)	1355, 1882
HpyCH4III	ACNGT	9 cut(s)	236, 938, 1070, 1199, 1211, 1535, 1545, 1797, 2047
HpyCH4IV	ACGT	8 cut(s)	117, 537, 554, 929, 1020, 1047, 1170, 1383
HpyCH4V	TGCA	6 cut(s)	485, 1339, 1655, 1760, 1832, 1928
HpyF10VI	GCNNNNNNNGC	6 cut(s)	284, 788, 955, 1336, 1430, 1610
HpyF3I	CTNAG	6 cut(s)	364, 601, 671, 918, 1473, 1551
HpySE526I	ACGT	8 cut(s)	117, 537, 554, 929, 1020, 1047, 1170, 1383
Hsp92II	CATG	8 cut(s)	354, 460, 1471, 1495, 1659, 1676, 1804, 1947
HspAI	GCGC	3 cut(s)	605, 1328, 1820
KflI	GGGWCCC	1 cut(s)	1248
KpnI	GGTACC	1 cut(s)	1062
KroI	GCCGGC	1 cut(s)	1609
KroNI	GCCGGC	1 cut(s)	1611
Ksp22I	TGATCA	1 cut(s)	1368
KspAI	GTTAAC	1 cut(s)	583
LguI	GCTCTTC	1 cut(s)	1382
LmnI	GCTCC	1 cut(s)	134
Lsp1109I	GCAGC	3 cut(s)	791, 1004, 1639
LweI	GCATC	2 cut(s)	651, 1915
MabI	ACCWGGT	1 cut(s)	384
MaeI	CTAG	6 cut(s)	593, 656, 1605, 1649, 1989, 2016
MaeII	ACGT	8 cut(s)	117, 537, 554, 929, 1020, 1047, 1170, 1383
MaeIII	GTNAC	8 cut(s)	674, 807, 1043, 1113, 1166, 1199, 1978, 1997
MflI	RGATCY	2 cut(s)	367, 2058
MhlI	GDGCHC	4 cut(s)	249, 1126, 1394, 1460
MlsI	TGGCCA	2 cut(s)	461, 1424
MluCI	AATT	6 cut(s)	212, 379, 1148, 1708, 1755, 1761
MluNI	TGGCCA	2 cut(s)	461, 1424
MlyI	GAGTC	6 cut(s)	167, 387, 611, 691, 1118, 1946
MmeI	TCCRAC	3 cut(s)	544, 665, 1386
Mox20I	TGGCCA	2 cut(s)	461, 1424
MroNI	GCCGGC	1 cut(s)	1609
MscI	TGGCCA	2 cut(s)	461, 1424
MseI	TTAA	6 cut(s)	378, 582, 1497, 1662, 1835, 2028
MslI	CAYNNNNRTG	3 cut(s)	155, 402, 1353
Msp20I	TGGCCA	2 cut(s)	461, 1424
MspA1I	CMGCKG	1 cut(s)	1628
MspI	CCGG	9 cut(s)	140, 153, 163, 300, 560, 696, 804, 1610, 1881
MspR9I	CCNGG	3 cut(s)	386, 805, 1882
MvaI	CCWGG	1 cut(s)	386
MvnI	CGCG	3 cut(s)	1257, 1328, 1330
MwoI	GCNNNNNNNGC	6 cut(s)	284, 788, 955, 1336, 1430, 1610
NaeI	GCCGGC	1 cut(s)	1611
NciI	CCSGG	2 cut(s)	805, 1882
NcoI	CCATGG	1 cut(s)	1491
NgoMIV	GCCGGC	1 cut(s)	1609
NlaIII	CATG	8 cut(s)	354, 460, 1471, 1495, 1659, 1676, 1804, 1947
NlaIV	GGNNCC	8 cut(s)	130, 700, 1060, 1123, 1249, 1250, 1324, 1963
NmuCI	GTSAC	5 cut(s)	674, 1113, 1166, 1199, 1978
NspV	TTCGAA	1 cut(s)	1016
OliI	CACNNNNGTG	1 cut(s)	1353
PciSI	GCTCTTC	1 cut(s)	1382
PcsI	WCGNNNNNNNCGW	1 cut(s)	1176
PdiI	GCCGGC	1 cut(s)	1611
PfeI	GAWTC	7 cut(s)	43, 111, 413, 517, 688, 1013, 2021
PinAI	ACCGGT	2 cut(s)	162, 299
PkrI	GCNGC	4 cut(s)	781, 994, 1327, 1654
Ple19I	CGATCG	1 cut(s)	443
PleI	GAGTC	6 cut(s)	167, 387, 611, 690, 1117, 1946
PpsI	GAGTC	6 cut(s)	167, 387, 611, 690, 1117, 1946
PpuMI	RGGWCCY	1 cut(s)	1248
PshAI	GACNNNNGTC	1 cut(s)	681
Psp124BI	GAGCTC	1 cut(s)	249
Psp1406I	AACGTT	1 cut(s)	1020
Psp5II	RGGWCCY	1 cut(s)	1248
Psp6I	CCWGG	1 cut(s)	384
PspEI	GGTNACC	1 cut(s)	1978
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	8 cut(s)	130, 700, 1060, 1123, 1249, 1250, 1324, 1963
PspPI	GGNCC	2 cut(s)	698, 1248
PspPPI	RGGWCCY	1 cut(s)	1248
PsuI	RGATCY	2 cut(s)	367, 2058
PvuI	CGATCG	1 cut(s)	443
RseI	CAYNNNNRTG	3 cut(s)	155, 402, 1353
SacI	GAGCTC	1 cut(s)	249
SapI	GCTCTTC	1 cut(s)	1382
SaqAI	TTAA	6 cut(s)	378, 582, 1497, 1662, 1835, 2028
SatI	GCNGC	4 cut(s)	780, 993, 1326, 1653
Sau96I	GGNCC	2 cut(s)	698, 1248
ScaI	AGTACT	2 cut(s)	597, 1529
SchI	GAGTC	6 cut(s)	167, 387, 611, 691, 1118, 1946
ScrFI	CCNGG	3 cut(s)	386, 805, 1882
SduI	GDGCHC	4 cut(s)	249, 1126, 1394, 1460
SexAI	ACCWGGT	1 cut(s)	384
SfaNI	GCATC	2 cut(s)	651, 1915
SfcI	CTRYAG	2 cut(s)	608, 868
SfuI	TTCGAA	1 cut(s)	1016
SinI	GGWCC	2 cut(s)	698, 1248
SmiMI	CAYNNNNRTG	3 cut(s)	155, 402, 1353
SmlI	CTYRAG	2 cut(s)	874, 1127
SmoI	CTYRAG	2 cut(s)	874, 1127
SpeI	ACTAGT	1 cut(s)	1988
Sse9I	AATT	6 cut(s)	212, 379, 1148, 1708, 1755, 1761
SsiI	CCGC	7 cut(s)	24, 123, 137, 1035, 1326, 1628, 1851
SspI	AATATT	1 cut(s)	421
SspMI	CTAG	6 cut(s)	593, 656, 1605, 1649, 1989, 2016
SstI	GAGCTC	1 cut(s)	249
StyD4I	CCNGG	3 cut(s)	384, 803, 1880
StyI	CCWWGG	5 cut(s)	37, 861, 1292, 1425, 1491
TaaI	ACNGT	9 cut(s)	236, 938, 1070, 1199, 1211, 1535, 1545, 1797, 2047
TaiI	ACGT	8 cut(s)	120, 540, 557, 932, 1023, 1050, 1173, 1386
TaqI	TCGA	8 cut(s)	144, 243, 258, 439, 743, 1016, 1146, 1518
TaqII	GACCGA	1 cut(s)	294
TasI	AATT	6 cut(s)	212, 379, 1148, 1708, 1755, 1761
TatI	WGTACW	6 cut(s)	236, 595, 1050, 1266, 1527, 1566
TauI	GCSGC	1 cut(s)	1328
TfiI	GAWTC	7 cut(s)	43, 111, 413, 517, 688, 1013, 2021
Tru1I	TTAA	6 cut(s)	378, 582, 1497, 1662, 1835, 2028
Tru9I	TTAA	6 cut(s)	378, 582, 1497, 1662, 1835, 2028
TscAI	CASTG	3 cut(s)	679, 1357, 1914
TseFI	GTSAC	5 cut(s)	674, 1113, 1166, 1199, 1978
TseI	GCWGC	3 cut(s)	779, 992, 1652
Tsp45I	GTSAC	5 cut(s)	674, 1113, 1166, 1199, 1978
TspDTI	ATGAA	6 cut(s)	332, 930, 963, 1658, 1787, 1817
TspGWI	ACGGA	5 cut(s)	447, 708, 1154, 1610, 1695
TspRI	CASTG	3 cut(s)	679, 1357, 1914
VpaK11BI	GGWCC	2 cut(s)	698, 1248
XapI	RAATTY	2 cut(s)	212, 1708
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1290, 1402
XmiI	GTMKAC	2 cut(s)	623, 767
XspI	CTAG	6 cut(s)	593, 656, 1605, 1649, 1989, 2016
ZrmI	AGTACT	2 cut(s)	597, 1529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.