Rmu_sc0000521.1_g000008

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000521.1
Physical Location & Seq
Forward (+)
41062 .. 41448
387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000521.1_g000008.1.cds

Sequence Viewer

Length: 387 bp
atgatcgagttggcttggctagatgggctaaaaggtgtcatcgcaatgggaaacttgatcagattgtttgatcaaaacttgaagagtgaaattgcagtcagatgcttgcataaatttgcttccattgcaatgagttacatggatgataatgggatcaataagccgtcaatggatgatgttgtgagagggcttcagtttgcattgcagatgcaggaaaacaacgaggattatattgatcacattgaaaggacgattcaagatgagatttcattggtcaaggacaatgaagggtcttgttctagtgagcaaagaaatggggcaaacaaatccattaaagagttgaccaagacaattttctctgagattattgatccggttggaagataa

Protein Analysis

128

Amino Acids

14.45

Weight (kDa)

4.76

Isoelectric Point (pI)

53.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 161, 365
AcsI RAATTY 1 cut(s) 113
AcuI CTGAAG 1 cut(s) 176
AgsI TTSAA 3 cut(s) 82, 245, 257
AjuI GAANNNNNNNTTGG 2 cut(s) 338, 370
AlwI GGATC 2 cut(s) 161, 365
ApoI RAATTY 1 cut(s) 113
BccI CCATC 1 cut(s) 17
BceAI ACGGC 1 cut(s) 148
BclI TGATCA 3 cut(s) 57, 70, 235
BfaI CTAG 2 cut(s) 20, 300
BmsI GCATC 2 cut(s) 92, 198
BsaWI WCCGGW 1 cut(s) 373
Bse3DI GCAATG 4 cut(s) 51, 123, 135, 200
BseGI GGATG 2 cut(s) 148, 178
BseMI GCAATG 4 cut(s) 51, 123, 135, 200
BseMII CTCAG 1 cut(s) 351
BsiSI CCGG 1 cut(s) 374
Bsp143I GATC 6 cut(s) 3, 57, 70, 153, 235, 370
BspCNI CTCAG 1 cut(s) 352
BspPI GGATC 2 cut(s) 161, 365
BsrDI GCAATG 4 cut(s) 51, 123, 135, 200
BssMI GATC 6 cut(s) 3, 57, 70, 153, 235, 370
Bst6I CTCTTC 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 1 cut(s) 360
BstF5I GGATG 2 cut(s) 148, 178
BstKTI GATC 6 cut(s) 6, 60, 73, 156, 238, 373
BstMBI GATC 6 cut(s) 3, 57, 70, 153, 235, 370
BstMWI GCNNNNNNNGC 2 cut(s) 25, 125
BtgZI GCGATG 1 cut(s) 25
BtsCI GGATG 2 cut(s) 148, 178
Cac8I GCNNGC 1 cut(s) 107
CviAII CATG 1 cut(s) 139
CviJI RGCY 5 cut(s) 14, 19, 28, 163, 190
CviKI_1 RGCY 5 cut(s) 14, 19, 28, 163, 190
DdeI CTNAG 1 cut(s) 360
DpnI GATC 6 cut(s) 5, 59, 72, 155, 237, 372
DpnII GATC 6 cut(s) 3, 57, 70, 153, 235, 370
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
Eco57I CTGAAG 1 cut(s) 176
FaeI CATG 1 cut(s) 142
FaiI YATR 3 cut(s) 111, 140, 231
FatI CATG 1 cut(s) 138
FbaI TGATCA 3 cut(s) 57, 70, 235
FokI GGATG 2 cut(s) 155, 185
FspBI CTAG 2 cut(s) 20, 300
HapII CCGG 1 cut(s) 374
Hin1II CATG 1 cut(s) 142
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HinfI GANTC 1 cut(s) 253
HpaII CCGG 1 cut(s) 374
Hpy166II GTNNAC 1 cut(s) 342
Hpy188I TCNGA 3 cut(s) 62, 101, 361
Hpy188III TCNNGA 1 cut(s) 257
Hpy8I GTNNAC 1 cut(s) 342
HpyAV CCTTC 1 cut(s) 281
HpyCH4V TGCA 6 cut(s) 95, 109, 128, 200, 205, 211
HpyF10VI GCNNNNNNNGC 2 cut(s) 25, 125
HpyF3I CTNAG 1 cut(s) 360
Hsp92II CATG 1 cut(s) 142
Ksp22I TGATCA 3 cut(s) 57, 70, 235
Kzo9I GATC 6 cut(s) 3, 57, 70, 153, 235, 370
LpnPI CCDG 1 cut(s) 197
LweI GCATC 2 cut(s) 92, 198
MaeI CTAG 2 cut(s) 20, 300
MaeIII GTNAC 1 cut(s) 134
MalI GATC 6 cut(s) 5, 59, 72, 155, 237, 372
MboI GATC 6 cut(s) 3, 57, 70, 153, 235, 370
MboII GAAGA 1 cut(s) 94
MluCI AATT 3 cut(s) 90, 113, 351
MmeI TCCRAC 1 cut(s) 358
MnlI CCTC 2 cut(s) 179, 217
MseI TTAA 1 cut(s) 333
MslI CAYNNNNRTG 2 cut(s) 44, 128
MspI CCGG 1 cut(s) 374
MwoI GCNNNNNNNGC 2 cut(s) 25, 125
NdeII GATC 6 cut(s) 3, 57, 70, 153, 235, 370
NlaIII CATG 1 cut(s) 142
PfeI GAWTC 1 cut(s) 253
RseI CAYNNNNRTG 2 cut(s) 44, 128
SaqAI TTAA 1 cut(s) 333
Sau3AI GATC 6 cut(s) 3, 57, 70, 153, 235, 370
SetI ASST 1 cut(s) 37
SfaNI GCATC 2 cut(s) 92, 198
SmiMI CAYNNNNRTG 2 cut(s) 44, 128
Sse9I AATT 3 cut(s) 90, 113, 351
SspMI CTAG 2 cut(s) 20, 300
TaqI TCGA 1 cut(s) 6
TasI AATT 3 cut(s) 90, 113, 351
TfiI GAWTC 1 cut(s) 253
Tru1I TTAA 1 cut(s) 333
Tru9I TTAA 1 cut(s) 333
TspDTI ATGAA 2 cut(s) 258, 300
XapI RAATTY 1 cut(s) 113
XspI CTAG 2 cut(s) 20, 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.