Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

76201607 .. 76205290

Gene Structure 3684 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021527

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

ATGGTGTACCGAATCAACATCGGAGGAGGCCCTATCTCGCCGGACGCAGACACTGGAATGTACCGGTATTGGGACTCCTCCGACGATACCTATTTGGATTATCTTCCCCGGTTTCCAACTTCATCCTTACCCTCTCATCTCTCTCTACCTACAATGAGACCAATCATCACTCCTCTCTACCTCTACTTGTTCCTCCACATCCGCACTCTCTTCGTCACCGGTCAGTCGCCACCATACACTCCGGTCGACAATACCCTCCTCACCTGTGGCAATTCCGGCCAACAGAGCTCCAATGACGGCAGAAAGTGGAGCGGAGATATCGACTCAAAATTCACCCCAGTAGGTAACGCATCCCAATCCATAGATGCACCGCGGTCGGACACAGCCAGCCAAGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCGAATTCACTTACAAAATTCCCCTCTCTCCCGGCCAAAAATTCATCCGCTTGCATTTCAATCCACAGACATACACCCCGGACTTCCAACGCTCCAATTCCCTCTTCTCCGTCACCGCCGCCGGCTTCACTCTCCTCAAAGACTTCAACGCCTCCGTCACCGCCGACGCCTCCGGCCGGCCCACGCTGGTCAGAGAATTCTGTGTAAACATCGAGACAGTGGAGAGACTCAACATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCCATGCCCACCAGTTTTTACTACACCGCAGGCGAAAGCGATTCAGCTAAATTGGTCGACGCCAGCGCAAGCTCATATACGATCGAAAACAATACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGCGGAGGCCCCATCTCGCCGAACGCAGACACCGGAATGTACCGGACTTGGGAAACTGACGACAAAATCTATTTGGATGATATAAGTAAAAAATTCAGCGTGCTACCACAGAACAATACAATTGAGCTCAATTTCGTCAGAGGAGTTCCAGAATACTCTGCTCCAAAACCAGTTTACACAACAGCTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTCACATGGGTATTTCCCTTAGATCCCAAGTTTAATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGATATTACCAAGCCCAGAGATCGAGCGTTTCAAATCTTCATGGCCAATCAAACCGCAGAAAATATTTTTGATGTTATCGTAGAGAGCGGAGCAAATGGGAATCCAGTTTACAGAGACTACGTCGTCGGAATGTTCACGCCTCCGGTTGGAAGAGCGAAGAAAGTTAACCTCTTTCTAGTACTCGCAGCGTTACAGAGAGATTCGTATACTAAATACAACGATGGCATCTTGAACGGGCTAGAAATCTTCAAGCTCAGCGACTCGAGTCGGAATCTGGCCGGACCCAACCCCGACCCACCTCCGGTGAAAGCACCAAACGCACCACCGAAGAGACCCAGTAAGAAGAAGTCTACTCCTATGGCAGCTATCATTGCAGGCGTAGTTTCCGGGTTACTTATGCTCTCTGTTCTCGGATTTTTTGTTTTCCGGCGAGGGAGAAAGGCCAAGGATTATAGCTCAAGTCAAGTAAAGTGGGGTCTGCTCTCTTTTTCAACGACTACTAAGTCCTCCAAGTCCACCACGTCTTACGGTTCATCTCTACCGTCCGAGCTGTGTCATCACTTTTCATTGCCGGAGATCAGAGCCGCCACGCAAAACTTTGATGATTCGAACGTTATTGGGCGTGGCGGGTTTGGTAACGTGTACAAAGGTACCATCAACGGTGCGTCCACCCCCTTTGCGATCAAACGGCTGAAAGCGGAGTCGTCACAGGGTGCCCTTGAGTTCAAGACGGAGATCGAATTGCTCTCCCAACTCCGTCACGTCCATCTCGTGTCTCTGGTCGGGTACTGTGACGACAACGGCGAGATGATTCTGGTGTATGACTATATGGAAAATGGGACCCTACGCGATCATTTGTACAACTCCGAAAATCCACCTCTTCCTTGGGAACAAAGGCTTCAAATTTGTATTGGTGCGGCGCGCGGGTTGCACTACCTTCACACTGGTGTCAAGTGCATGATCATTCACCGAGACGTGAAGAGCACGAACATCTTGTTGGACGACAAATGGGTGGCCAAGGTCGCTGATTTCGGGTTGTCGAAAATGGGCACGACCAACATGTCTAAGACCCACATTAGCACCATGGTCAAGGGCAGTTTCGGCTATCTCGACCCGGAGTACTACCGTCGTCAACAATTGACTGAGAAGTCTGATGTGTACTCATTCGGCGTAGTATTGTGTGAGGTGTTGTGTGCTAGGCCGGCTTTGATCCGAACAGCAGACAAGAAGCAAATGAACCTAGCTGCATGGTTTAAGACCTGTCATGGAAACGGAACGCTTGACCAAATCATTGACCCCAATTTGAGGGGTAAGATTGTAAATGAGTGCTTGGACAAGTTTGTTGAAATTGCAATTAGTTGTATGCATGATAATGGGAGTGAACGACCGTCCATGAATGATGTTATATGGGCGCTTGATTGTGCATTAAAACTTCAACAGACCGCAGAGGGTTCGGATTTGGATTTCAATGCCGGGAAGAAGGGTGAAGACGAGGCTTTAGTGCTGAATGATAGTGATGCAGGGTTTAGTGGCACATGGGAAGACTCGTCAGGTTCCAAGAACAGCAGGGTGACCAAAACTAGTAGTAGTTACCAAAATTCTACTGTTAGTGATTCCATTAAAGGGCTGTCAGGTACAGTCTTCTCTGAGATCTACGATCCCAATGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

938

Amino Acids

103.84

Weight (kDa)

7.51

Isoelectric Point (pI)

38.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	88 - 464	5.4e-31	Malectin-like domain
Malectin	PF11721	276 - 420	6.5e-06	Malectin domain
Pkinase	PF00069	582 - 848	5.1e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	584 - 849	1.6e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	1262, 1642, 2200, 2287
Acc65I	GGTACC	1 cut(s)	1790
AccB1I	GGYRCC	2 cut(s)	1790, 1853
AccBSI	CCGCTC	2 cut(s)	312, 1227
AccI	GTMKAC	4 cut(s)	246, 771, 1346, 1490
AccII	CGCG	4 cut(s)	373, 1989, 2062, 2064
AclI	AACGTT	1 cut(s)	1752
AclWI	GGATC	3 cut(s)	1085, 2344, 2792
AcoI	YGGCCR	6 cut(s)	277, 457, 598, 1182, 1416, 2154
AcsI	RAATTY	8 cut(s)	329, 428, 441, 464, 620, 932, 2043, 2737
AcyI	GRCGYC	2 cut(s)	591, 774
AdeI	CACNNNGTG	1 cut(s)	1853
AfiI	CCNNNNNNNGG	9 cut(s)	70, 411, 600, 889, 1075, 1286, 1441, 2445, 2763
AflIII	ACRYGT	2 cut(s)	1779, 2199
AgeI	ACCGGT	2 cut(s)	63, 218
AhlI	ACTAGT	1 cut(s)	2720
AjiI	CACGTC	3 cut(s)	1662, 1903, 2116
AjnI	CCWGG	1 cut(s)	1107
AjuI	GAANNNNNNNTTGG	4 cut(s)	512, 544, 2120, 2152
AleI	CACNNNNGTG	1 cut(s)	2085
Alw21I	GWGCWC	3 cut(s)	290, 969, 2126
Alw26I	GTCTC	8 cut(s)	151, 632, 643, 1108, 1248, 1465, 1920, 2106
AlwI	GGATC	3 cut(s)	1085, 2344, 2792
AlwNI	CAGNNNCTG	1 cut(s)	53
Ama87I	CYCGRG	1 cut(s)	1402
ApeKI	GCWGC	3 cut(s)	1325, 1502, 2384
ApoI	RAATTY	8 cut(s)	329, 428, 441, 464, 620, 932, 2043, 2737
AsiGI	ACCGGT	2 cut(s)	63, 218
Asp718I	GGTACC	1 cut(s)	1790
AspLEI	GCGC	4 cut(s)	782, 2062, 2064, 2554
AspS9I	GGNCC	5 cut(s)	29, 603, 848, 1421, 1980
AsuC2I	CCSGG	6 cut(s)	109, 456, 503, 1528, 2255, 2614
AsuII	TTCGAA	1 cut(s)	1748
AvaI	CYCGRG	1 cut(s)	1402
AvaII	GGWCC	2 cut(s)	1421, 1980
BaeGI	GKGCMC	2 cut(s)	1858, 2192
BaeI	ACNNNNGTAYC	2 cut(s)	1774, 1807
BalI	TGGCCA	2 cut(s)	1184, 2156
BanI	GGYRCC	2 cut(s)	1790, 1853
BanII	GRGCYC	2 cut(s)	290, 969
BauI	CACGAG	1 cut(s)	1910
BbsI	GAAGAC	3 cut(s)	2634, 2688, 2773
Bbv12I	GWGCWC	3 cut(s)	290, 969, 2126
BbvI	GCAGC	3 cut(s)	1337, 1514, 2371
BccI	CCATC	6 cut(s)	814, 860, 1058, 1355, 1802, 1914
BceAI	ACGGC	3 cut(s)	313, 1844, 1957
BcgI	CGANNNNNNTGC	6 cut(s)	193, 227, 357, 391, 2574, 2608
BciT130I	CCWGG	1 cut(s)	1109
BclI	TGATCA	1 cut(s)	2100
BcnI	CCSGG	6 cut(s)	109, 456, 503, 1528, 2255, 2614
BcoDI	GTCTC	8 cut(s)	151, 632, 643, 1108, 1248, 1465, 1920, 2106
BcuI	ACTAGT	1 cut(s)	2720
BfaI	CTAG	5 cut(s)	1316, 1379, 2337, 2381, 2721
BfoI	RGCGCY	1 cut(s)	2555
BglII	AGATCT	1 cut(s)	2790
BisI	GCNGC	6 cut(s)	543, 1326, 1503, 1725, 2058, 2385
BlpI	GCTNAGC	1 cut(s)	1394
BlsI	GCNGC	6 cut(s)	544, 1327, 1504, 1726, 2059, 2386
BmcAI	AGTACT	2 cut(s)	1320, 2261
Bme1390I	CCNGG	7 cut(s)	109, 456, 503, 1109, 1528, 2255, 2614
Bme18I	GGWCC	2 cut(s)	1421, 1980
BmeT110I	CYCGRG	1 cut(s)	1402
BmgBI	CACGTC	3 cut(s)	1662, 1903, 2116
BmgT120I	GGNCC	5 cut(s)	29, 603, 848, 1421, 1980
BmiI	GGNNCC	7 cut(s)	850, 1423, 1792, 1855, 1981, 1982, 2695
BmrFI	CCNGG	7 cut(s)	109, 456, 503, 1109, 1528, 2255, 2614
BmrI	ACTGGG	2 cut(s)	332, 1470
BmsI	GCATC	5 cut(s)	355, 359, 670, 1374, 2647
BmuI	ACTGGG	2 cut(s)	332, 1470
BoxI	GACNNNNGTC	1 cut(s)	1404
BpiI	GAAGAC	3 cut(s)	2634, 2688, 2773
BpmI	CTGGAG	1 cut(s)	836
Bpu1102I	GCTNAGC	1 cut(s)	1394
Bpu14I	TTCGAA	1 cut(s)	1748
BpuEI	CTTGAG	2 cut(s)	1582, 1880
BpuMI	CCSGG	6 cut(s)	109, 456, 503, 1528, 2255, 2614
BsaHI	GRCGYC	2 cut(s)	591, 774
BsaI	GGTCTC	2 cut(s)	151, 1465
BsaJI	CCNNGG	7 cut(s)	107, 371, 501, 1584, 2024, 2157, 2223
BsaWI	WCCGGW	7 cut(s)	63, 218, 241, 872, 882, 1282, 1441
BsaXI	ACNNNNNCTCC	2 cut(s)	809, 839
Bsc4I	CCNNNNNNNGG	9 cut(s)	70, 411, 600, 889, 1075, 1286, 1441, 2445, 2763
Bse118I	RCCGGY	5 cut(s)	63, 218, 545, 600, 2341
Bse1I	ACTGG	7 cut(s)	58, 338, 726, 1010, 1244, 1476, 2089
Bse3DI	GCAATG	2 cut(s)	1509, 1706
BseBI	CCWGG	1 cut(s)	1109
BseDI	CCNNGG	7 cut(s)	107, 371, 501, 1584, 2024, 2157, 2223
BseGI	GGATG	6 cut(s)	122, 198, 350, 468, 922, 1044
BseLI	CCNNNNNNNGG	9 cut(s)	70, 411, 600, 889, 1075, 1286, 1441, 2445, 2763
BseMI	GCAATG	2 cut(s)	1509, 1706
BseMII	CTCAG	3 cut(s)	1408, 2274, 2778
BseNI	ACTGG	7 cut(s)	58, 338, 726, 1010, 1244, 1476, 2089
BsePI	GCGCGC	1 cut(s)	2060
BseRI	GAGGAG	6 cut(s)	39, 67, 162, 248, 548, 996
BseSI	GKGCMC	2 cut(s)	1858, 2192
BseX3I	CGGCCG	1 cut(s)	598
BseXI	GCAGC	3 cut(s)	1337, 1514, 2371
Bsh1236I	CGCG	4 cut(s)	373, 1989, 2062, 2064
Bsh1285I	CGRYCG	5 cut(s)	246, 377, 601, 798, 2528
BshNI	GGYRCC	2 cut(s)	1790, 1853
BshTI	ACCGGT	2 cut(s)	63, 218
BsiEI	CGRYCG	5 cut(s)	246, 377, 601, 798, 2528
BsiHKAI	GWGCWC	3 cut(s)	290, 969, 2126
BsiHKCI	CYCGRG	1 cut(s)	1402
BsiWI	CGTACG	1 cut(s)	684
BslFI	GGGAC	3 cut(s)	86, 380, 1993
BslI	CCNNNNNNNGG	9 cut(s)	70, 411, 600, 889, 1075, 1286, 1441, 2445, 2763
BsmAI	GTCTC	8 cut(s)	151, 632, 643, 1108, 1248, 1465, 1920, 2106
BsmBI	CGTCTC	1 cut(s)	2106
BsmFI	GGGAC	3 cut(s)	86, 380, 1993
Bso31I	GGTCTC	2 cut(s)	151, 1465
BsoBI	CYCGRG	1 cut(s)	1402
Bsp119I	TTCGAA	1 cut(s)	1748
Bsp1286I	GDGCHC	5 cut(s)	290, 969, 1858, 2126, 2192
Bsp1407I	TGTACA	2 cut(s)	1782, 1998
Bsp1720I	GCTNAGC	1 cut(s)	1394
Bsp19I	CCATGG	1 cut(s)	2223
BspCNI	CTCAG	3 cut(s)	1407, 2275, 2779
BspFNI	CGCG	4 cut(s)	373, 1989, 2062, 2064
BspLI	GGNNCC	7 cut(s)	850, 1423, 1792, 1855, 1981, 1982, 2695
BspPI	GGATC	3 cut(s)	1085, 2344, 2792
BspQI	GCTCTTC	2 cut(s)	1285, 2114
BspT104I	TTCGAA	1 cut(s)	1748
BspT107I	GGYRCC	2 cut(s)	1790, 1853
BspTNI	GGTCTC	2 cut(s)	151, 1465
BsrBI	CCGCTC	2 cut(s)	312, 1227
BsrDI	GCAATG	2 cut(s)	1509, 1706
BsrFI	RCCGGY	5 cut(s)	63, 218, 545, 600, 2341
BsrGI	TGTACA	2 cut(s)	1782, 1998
BsrI	ACTGG	7 cut(s)	58, 338, 726, 1010, 1244, 1476, 2089
BssAI	RCCGGY	5 cut(s)	63, 218, 545, 600, 2341
BssECI	CCNNGG	7 cut(s)	107, 371, 501, 1584, 2024, 2157, 2223
BssHII	GCGCGC	1 cut(s)	2060
BssNAI	GTATAC	1 cut(s)	1347
BssNI	GRCGYC	2 cut(s)	591, 774
BssSI	CACGAG	1 cut(s)	1910
BssT1I	CCWWGG	4 cut(s)	1584, 2024, 2157, 2223
Bst1107I	GTATAC	1 cut(s)	1347
Bst2BI	CACGAG	1 cut(s)	1910
Bst2UI	CCWGG	1 cut(s)	1109
Bst4CI	ACNGT	9 cut(s)	643, 1670, 1683, 1802, 1931, 2267, 2529, 2746, 2779
Bst6I	CTCTTC	6 cut(s)	215, 533, 1285, 1463, 2025, 2114
BstACI	GRCGYC	2 cut(s)	591, 774
BstAUI	TGTACA	2 cut(s)	1782, 1998
BstBI	TTCGAA	1 cut(s)	1748
BstDEI	CTNAG	6 cut(s)	1087, 1394, 1641, 2205, 2283, 2787
BstDSI	CCRYGG	2 cut(s)	371, 2223
BstEII	GGTNACC	1 cut(s)	2710
BstF5I	GGATG	6 cut(s)	122, 198, 350, 468, 922, 1044
BstFNI	CGCG	4 cut(s)	373, 1989, 2062, 2064
BstH2I	RGCGCY	1 cut(s)	2555
BstHHI	GCGC	4 cut(s)	782, 2062, 2064, 2554
BstMAI	GTCTC	8 cut(s)	151, 632, 643, 1108, 1248, 1465, 1920, 2106
BstMCI	CGRYCG	5 cut(s)	246, 377, 601, 798, 2528
BstMWI	GCNNNNNNNGC	8 cut(s)	276, 285, 1457, 1511, 2068, 2162, 2241, 2342
BstNI	CCWGG	1 cut(s)	1109
BstNSI	RCATGY	1 cut(s)	2203
BstPAI	GACNNNNGTC	1 cut(s)	1404
BstPI	GGTNACC	1 cut(s)	2710
BstSCI	CCNGG	7 cut(s)	107, 454, 501, 1107, 1526, 2253, 2612
BstSLI	GKGCMC	2 cut(s)	1858, 2192
BstUI	CGCG	4 cut(s)	373, 1989, 2062, 2064
BstV1I	GCAGC	3 cut(s)	1337, 1514, 2371
BstV2I	GAAGAC	3 cut(s)	2634, 2688, 2773
BstX2I	RGATCY	2 cut(s)	1090, 2790
BstYI	RGATCY	2 cut(s)	1090, 2790
BstZ17I	GTATAC	1 cut(s)	1347
BstZI	CGGCCG	1 cut(s)	598
BtgI	CCRYGG	2 cut(s)	371, 2223
BtrI	CACGTC	3 cut(s)	1662, 1903, 2116
BtsCI	GGATG	6 cut(s)	122, 198, 350, 468, 922, 1044
BtsIMutI	CAGTG	3 cut(s)	51, 648, 2082
CaiI	CAGNNNCTG	1 cut(s)	53
CfoI	GCGC	4 cut(s)	782, 2062, 2064, 2554
Cfr10I	RCCGGY	5 cut(s)	63, 218, 545, 600, 2341
Cfr13I	GGNCC	5 cut(s)	29, 603, 848, 1421, 1980
Cfr42I	CCGCGG	1 cut(s)	374
CseI	GACGC	4 cut(s)	53, 599, 782, 1794
CsiI	ACCWGGT	1 cut(s)	1107
CspAI	ACCGGT	2 cut(s)	63, 218
CspCI	CAANNNNNGTGG	4 cut(s)	1592, 1627, 1798, 1833
DdeI	CTNAG	6 cut(s)	1087, 1394, 1641, 2205, 2283, 2787
DraIII	CACNNNGTG	1 cut(s)	1853
DrdI	GACNNNNNNGTC	4 cut(s)	1262, 1642, 2200, 2287
DseDI	GACNNNNNNGTC	4 cut(s)	1262, 1642, 2200, 2287
EaeI	YGGCCR	6 cut(s)	277, 457, 598, 1182, 1416, 2154
EagI	CGGCCG	1 cut(s)	598
Eam1104I	CTCTTC	6 cut(s)	215, 533, 1285, 1463, 2025, 2114
EarI	CTCTTC	6 cut(s)	215, 533, 1285, 1463, 2025, 2114
EciI	GGCGGA	1 cut(s)	858
Ecl136II	GAGCTC	2 cut(s)	288, 967
EclXI	CGGCCG	1 cut(s)	598
Eco130I	CCWWGG	4 cut(s)	1584, 2024, 2157, 2223
Eco24I	GRGCYC	2 cut(s)	290, 969
Eco31I	GGTCTC	2 cut(s)	151, 1465
Eco32I	GATATC	1 cut(s)	319
Eco47I	GGWCC	2 cut(s)	1421, 1980
Eco52I	CGGCCG	1 cut(s)	598
Eco53kI	GAGCTC	2 cut(s)	288, 967
Eco88I	CYCGRG	1 cut(s)	1402
Eco91I	GGTNACC	1 cut(s)	2710
EcoICRI	GAGCTC	2 cut(s)	288, 967
EcoO109I	RGGNCCY	3 cut(s)	29, 848, 1980
EcoO65I	GGTNACC	1 cut(s)	2710
EcoRI	GAATTC	2 cut(s)	428, 620
EcoRII	CCWGG	1 cut(s)	1107
EcoRV	GATATC	1 cut(s)	319
EcoT14I	CCWWGG	4 cut(s)	1584, 2024, 2157, 2223
EcoT22I	ATGCAT	1 cut(s)	2508
EcoT38I	GRGCYC	2 cut(s)	290, 969
ErhI	CCWWGG	4 cut(s)	1584, 2024, 2157, 2223
Esp3I	CGTCTC	1 cut(s)	2106
FaqI	GGGAC	3 cut(s)	86, 380, 1993
FauI	CCCGC	2 cut(s)	1760, 2057
FbaI	TGATCA	1 cut(s)	2100
FblI	GTMKAC	4 cut(s)	246, 771, 1346, 1490
Fnu4HI	GCNGC	6 cut(s)	543, 1326, 1503, 1725, 2058, 2385
FokI	GGATG	6 cut(s)	109, 185, 337, 455, 929, 1051
FriOI	GRGCYC	2 cut(s)	290, 969
FseI	GGCCGGCC	1 cut(s)	604
Fsp4HI	GCNGC	6 cut(s)	543, 1326, 1503, 1725, 2058, 2385
FspBI	CTAG	5 cut(s)	1316, 1379, 2337, 2381, 2721
GlaI	GCGC	4 cut(s)	781, 2061, 2063, 2553
GluI	GCNGC	6 cut(s)	543, 1326, 1503, 1725, 2058, 2385
GsuI	CTGGAG	1 cut(s)	836
HaeII	RGCGCY	1 cut(s)	2555
HgaI	GACGC	4 cut(s)	53, 599, 782, 1794
HhaI	GCGC	4 cut(s)	782, 2062, 2064, 2554
Hin1I	GRCGYC	2 cut(s)	591, 774
Hin6I	GCGC	4 cut(s)	780, 2060, 2062, 2552
HinP1I	GCGC	4 cut(s)	780, 2060, 2062, 2552
HincII	GTYRAC	4 cut(s)	247, 772, 1306, 2273
HindII	GTYRAC	4 cut(s)	247, 772, 1306, 2273
HpaI	GTTAAC	1 cut(s)	1306
Hpy188III	TCNNGA	6 cut(s)	637, 815, 989, 1369, 1867, 2249
Hpy99I	CGWCG	7 cut(s)	86, 593, 776, 842, 1265, 1268, 2271
HpyAV	CCTTC	3 cut(s)	673, 2087, 2614
HpyCH4III	ACNGT	9 cut(s)	643, 1670, 1683, 1802, 1931, 2267, 2529, 2746, 2779
HpyCH4IV	ACGT	7 cut(s)	837, 1260, 1661, 1752, 1779, 1902, 2115
HpyF10VI	GCNNNNNNNGC	8 cut(s)	276, 285, 1457, 1511, 2068, 2162, 2241, 2342
HpyF3I	CTNAG	6 cut(s)	1087, 1394, 1641, 2205, 2283, 2787
HpySE526I	ACGT	7 cut(s)	837, 1260, 1661, 1752, 1779, 1902, 2115
Hsp92I	GRCGYC	2 cut(s)	591, 774
HspAI	GCGC	4 cut(s)	780, 2060, 2062, 2552
KflI	GGGWCCC	1 cut(s)	1980
KpnI	GGTACC	1 cut(s)	1794
KroI	GCCGGC	3 cut(s)	545, 600, 2341
KroNI	GCCGGC	3 cut(s)	547, 602, 2343
Ksp22I	TGATCA	1 cut(s)	2100
KspAI	GTTAAC	1 cut(s)	1306
KspI	CCGCGG	1 cut(s)	374
LguI	GCTCTTC	2 cut(s)	1285, 2114
LmnI	GCTCC	6 cut(s)	293, 309, 428, 521, 1006, 1229
Lsp1109I	GCAGC	3 cut(s)	1337, 1514, 2371
LweI	GCATC	5 cut(s)	355, 359, 670, 1374, 2647
MabI	ACCWGGT	1 cut(s)	1107
MaeI	CTAG	5 cut(s)	1316, 1379, 2337, 2381, 2721
MaeII	ACGT	7 cut(s)	837, 1260, 1661, 1752, 1779, 1902, 2115
MbiI	CCGCTC	2 cut(s)	312, 1227
MfeI	CAATTG	2 cut(s)	960, 2276
MflI	RGATCY	2 cut(s)	1090, 2790
MhlI	GDGCHC	5 cut(s)	290, 969, 1858, 2126, 2192
MlsI	TGGCCA	2 cut(s)	1184, 2156
MluNI	TGGCCA	2 cut(s)	1184, 2156
MlyI	GAGTC	8 cut(s)	68, 317, 645, 1110, 1394, 1414, 1850, 2678
MmeI	TCCRAC	8 cut(s)	105, 140, 357, 535, 1246, 1267, 1388, 2118
Mox20I	TGGCCA	2 cut(s)	1184, 2156
Mph1103I	ATGCAT	1 cut(s)	2508
MroNI	GCCGGC	3 cut(s)	545, 600, 2341
MscI	TGGCCA	2 cut(s)	1184, 2156
MseI	TTAA	5 cut(s)	1101, 1305, 2394, 2567, 2760
MslI	CAYNNNNRTG	5 cut(s)	56, 875, 1125, 2085, 2511
Msp20I	TGGCCA	2 cut(s)	1184, 2156
MspA1I	CMGCKG	1 cut(s)	373
MspR9I	CCNGG	7 cut(s)	109, 456, 503, 1109, 1528, 2255, 2614
MunI	CAATTG	2 cut(s)	960, 2276
MvaI	CCWGG	1 cut(s)	1109
MvnI	CGCG	4 cut(s)	373, 1989, 2062, 2064
MwoI	GCNNNNNNNGC	8 cut(s)	276, 285, 1457, 1511, 2068, 2162, 2241, 2342
NaeI	GCCGGC	3 cut(s)	547, 602, 2343
NciI	CCSGG	6 cut(s)	109, 456, 503, 1528, 2255, 2614
NcoI	CCATGG	1 cut(s)	2223
NgoMIV	GCCGGC	3 cut(s)	545, 600, 2341
NlaIV	GGNNCC	7 cut(s)	850, 1423, 1792, 1855, 1981, 1982, 2695
NmeAIII	GCCGAG	1 cut(s)	391
NmuCI	GTSAC	7 cut(s)	214, 535, 580, 1845, 1898, 1931, 2710
NsiI	ATGCAT	1 cut(s)	2508
NspI	RCATGY	1 cut(s)	2203
NspV	TTCGAA	1 cut(s)	1748
OliI	CACNNNNGTG	1 cut(s)	2085
PaeR7I	CTCGAG	1 cut(s)	1402
PauI	GCGCGC	1 cut(s)	2060
PciI	ACATGT	1 cut(s)	2199
PciSI	GCTCTTC	2 cut(s)	1285, 2114
PcsI	WCGNNNNNNNCGW	3 cut(s)	1908, 1941, 2247
PdiI	GCCGGC	3 cut(s)	547, 602, 2343
Pfl23II	CGTACG	1 cut(s)	684
PflFI	GACNNNGTC	1 cut(s)	1259
PinAI	ACCGGT	2 cut(s)	63, 218
PkrI	GCNGC	6 cut(s)	544, 1327, 1504, 1726, 2059, 2386
Ple19I	CGATCG	1 cut(s)	798
PleI	GAGTC	8 cut(s)	68, 317, 645, 1110, 1394, 1413, 1849, 2678
PpsI	GAGTC	8 cut(s)	68, 317, 645, 1110, 1394, 1413, 1849, 2678
PpuMI	RGGWCCY	1 cut(s)	1980
PscI	ACATGT	1 cut(s)	2199
PshAI	GACNNNNGTC	1 cut(s)	1404
Psp124BI	GAGCTC	2 cut(s)	290, 969
Psp1406I	AACGTT	1 cut(s)	1752
Psp5II	RGGWCCY	1 cut(s)	1980
Psp6I	CCWGG	1 cut(s)	1107
PspEI	GGTNACC	1 cut(s)	2710
PspGI	CCWGG	1 cut(s)	1107
PspLI	CGTACG	1 cut(s)	684
PspN4I	GGNNCC	7 cut(s)	850, 1423, 1792, 1855, 1981, 1982, 2695
PspPI	GGNCC	5 cut(s)	29, 603, 848, 1421, 1980
PspPPI	RGGWCCY	1 cut(s)	1980
PspXI	VCTCGAGB	1 cut(s)	1402
PstNI	CAGNNNCTG	1 cut(s)	53
PsuI	RGATCY	2 cut(s)	1090, 2790
PsyI	GACNNNGTC	1 cut(s)	1259
PteI	GCGCGC	1 cut(s)	2060
PvuI	CGATCG	1 cut(s)	798
RigI	GGCCGGCC	1 cut(s)	604
RseI	CAYNNNNRTG	5 cut(s)	56, 875, 1125, 2085, 2511
SacI	GAGCTC	2 cut(s)	290, 969
SacII	CCGCGG	1 cut(s)	374
SalI	GTCGAC	2 cut(s)	245, 770
SapI	GCTCTTC	2 cut(s)	1285, 2114
SaqAI	TTAA	5 cut(s)	1101, 1305, 2394, 2567, 2760
SatI	GCNGC	6 cut(s)	543, 1326, 1503, 1725, 2058, 2385
Sau96I	GGNCC	5 cut(s)	29, 603, 848, 1421, 1980
ScaI	AGTACT	2 cut(s)	1320, 2261
SchI	GAGTC	8 cut(s)	68, 317, 645, 1110, 1394, 1414, 1850, 2678
ScrFI	CCNGG	7 cut(s)	109, 456, 503, 1109, 1528, 2255, 2614
SduI	GDGCHC	5 cut(s)	290, 969, 1858, 2126, 2192
SexAI	ACCWGGT	1 cut(s)	1107
SfaNI	GCATC	5 cut(s)	355, 359, 670, 1374, 2647
Sfr274I	CTCGAG	1 cut(s)	1402
Sfr303I	CCGCGG	1 cut(s)	374
SfuI	TTCGAA	1 cut(s)	1748
SgrBI	CCGCGG	1 cut(s)	374
SinI	GGWCC	2 cut(s)	1421, 1980
SlaI	CTCGAG	1 cut(s)	1402
SmiMI	CAYNNNNRTG	5 cut(s)	56, 875, 1125, 2085, 2511
SmlI	CTYRAG	3 cut(s)	1402, 1597, 1859
SmoI	CTYRAG	3 cut(s)	1402, 1597, 1859
SpeI	ACTAGT	1 cut(s)	2720
SspI	AATATT	1 cut(s)	1204
SspMI	CTAG	5 cut(s)	1316, 1379, 2337, 2381, 2721
SstI	GAGCTC	2 cut(s)	290, 969
StyD4I	CCNGG	7 cut(s)	107, 454, 501, 1107, 1526, 2253, 2612
StyI	CCWWGG	4 cut(s)	1584, 2024, 2157, 2223
TaaI	ACNGT	9 cut(s)	643, 1670, 1683, 1802, 1931, 2267, 2529, 2746, 2779
TaiI	ACGT	7 cut(s)	840, 1263, 1664, 1755, 1782, 1905, 2118
TaqII	GACCGA	1 cut(s)	1017
TatI	WGTACW	5 cut(s)	1318, 1782, 1998, 2259, 2298
TauI	GCSGC	3 cut(s)	545, 1727, 2060
Tru1I	TTAA	5 cut(s)	1101, 1305, 2394, 2567, 2760
Tru9I	TTAA	5 cut(s)	1101, 1305, 2394, 2567, 2760
TscAI	CASTG	3 cut(s)	58, 648, 2089
TseFI	GTSAC	7 cut(s)	214, 535, 580, 1845, 1898, 1931, 2710
TseI	GCWGC	3 cut(s)	1325, 1502, 2384
Tsp45I	GTSAC	7 cut(s)	214, 535, 580, 1845, 1898, 1931, 2710
TspDTI	ATGAA	9 cut(s)	111, 457, 682, 1055, 1168, 1662, 1695, 2390, 2549
TspGWI	ACGGA	6 cut(s)	523, 568, 714, 1886, 1886, 2427
TspRI	CASTG	3 cut(s)	58, 648, 2089
Tth111I	GACNNNGTC	1 cut(s)	1259
VpaK11BI	GGWCC	2 cut(s)	1421, 1980
XapI	RAATTY	8 cut(s)	329, 428, 441, 464, 620, 932, 2043, 2737
XceI	RCATGY	1 cut(s)	2203
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2022
XhoI	CTCGAG	1 cut(s)	1402
XmiI	GTMKAC	4 cut(s)	246, 771, 1346, 1490
XspI	CTAG	5 cut(s)	1316, 1379, 2337, 2381, 2721
ZrmI	AGTACT	2 cut(s)	1320, 2261
Zsp2I	ATGCAT	1 cut(s)	2508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.