Rorug02G0515800

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
64672312 .. 64672779
468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0515800.1

Sequence Viewer

Length: 468 bp
ATGACCTTTACTTCTGCTATCACAAAAATGCTCCGGCTACTTCAGAAACTTGGTCCATTTGATGCTCCTCCCGACCCAGAAGCAGTGCTGCCTGATCAAGCACCAAAGCACCAAAACTTGGACTGGGCAAAGATACTTGTGGTGTTCAGCTTAGCATCAGCAATTGACATTGCTCTCCTATCCGTCCAGATTCACTCCCAGAAGCTCCCTATAACCTTTTACTTTCTCGAGCTCGCTCTCTTGCTTGCATTTTCTTGTTTCTTCACCAGCAGGTCAGTTCATTCCAGCTCTCCACTAGTCGCTCGAGTGCTCGAGCGATTTGGCATATTTTTTGGAGTTACTGCATTCTTCAAATCCATCACTATTCCATTTCCAGCTATGTGGTTCAAATGTATTGCGTGCTTCGTCTACGCAGTTTCTTGGCTTGCAATCTTGTTTTGCAACTCCTCACCATCCTCTGTTCAATAA

Protein Analysis

155

Amino Acids

17.27

Weight (kDa)

8.78

Isoelectric Point (pI)

52.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 261
AccB7I CCANNNNNTGG 1 cut(s) 118
AccI GTMKAC 1 cut(s) 408
AcuI CTGAAG 1 cut(s) 26
AfiI CCNNNNNNNGG 1 cut(s) 118
AgsI TTSAA 3 cut(s) 352, 388, 464
AhlI ACTAGT 1 cut(s) 295
AluBI AGCT 5 cut(s) 150, 205, 232, 288, 377
AluI AGCT 5 cut(s) 150, 205, 232, 288, 377
Alw21I GWGCWC 2 cut(s) 234, 312
Ama87I CYCGRG 3 cut(s) 227, 303, 311
ApeKI GCWGC 1 cut(s) 88
AspS9I GGNCC 1 cut(s) 53
AsuHPI GGTGA 2 cut(s) 256, 441
AvaI CYCGRG 3 cut(s) 227, 303, 311
AvaII GGWCC 1 cut(s) 53
BanII GRGCYC 1 cut(s) 234
Bbv12I GWGCWC 2 cut(s) 234, 312
BbvI GCAGC 1 cut(s) 75
BccI CCATC 2 cut(s) 365, 460
BclI TGATCA 1 cut(s) 94
BcuI ACTAGT 1 cut(s) 295
BfaI CTAG 1 cut(s) 296
BfuAI ACCTGC 1 cut(s) 261
BisI GCNGC 1 cut(s) 89
BlpI GCTNAGC 1 cut(s) 151
BlsI GCNGC 1 cut(s) 90
Bme18I GGWCC 1 cut(s) 53
BmeT110I CYCGRG 3 cut(s) 227, 303, 311
BmgT120I GGNCC 1 cut(s) 53
BmrI ACTGGG 1 cut(s) 133
BmsI GCATC 2 cut(s) 52, 164
BmuI ACTGGG 1 cut(s) 133
Bpu1102I GCTNAGC 1 cut(s) 151
Bsc4I CCNNNNNNNGG 1 cut(s) 118
Bse1I ACTGG 1 cut(s) 128
Bse3DI GCAATG 1 cut(s) 168
BseGI GGATG 1 cut(s) 452
BseLI CCNNNNNNNGG 1 cut(s) 118
BseMI GCAATG 1 cut(s) 168
BseNI ACTGG 1 cut(s) 128
BseRI GAGGAG 2 cut(s) 57, 436
BseXI GCAGC 1 cut(s) 75
BsiHKAI GWGCWC 2 cut(s) 234, 312
BsiHKCI CYCGRG 3 cut(s) 227, 303, 311
BsiSI CCGG 1 cut(s) 34
BslI CCNNNNNNNGG 1 cut(s) 118
BsmI GAATGC 1 cut(s) 344
BsoBI CYCGRG 3 cut(s) 227, 303, 311
Bsp1286I GDGCHC 2 cut(s) 234, 312
Bsp143I GATC 1 cut(s) 94
Bsp1720I GCTNAGC 1 cut(s) 151
BspMI ACCTGC 1 cut(s) 261
BsrDI GCAATG 1 cut(s) 168
BsrI ACTGG 1 cut(s) 128
BssMI GATC 1 cut(s) 94
BstC8I GCNNGC 4 cut(s) 234, 246, 400, 426
BstDEI CTNAG 1 cut(s) 151
BstF5I GGATG 1 cut(s) 452
BstKTI GATC 1 cut(s) 97
BstMBI GATC 1 cut(s) 94
BstV1I GCAGC 1 cut(s) 75
BstXI CCANNNNNNTGG 1 cut(s) 381
BtsCI GGATG 1 cut(s) 452
BtsI GCAGTG 1 cut(s) 90
BtsIMutI CAGTG 1 cut(s) 90
BveI ACCTGC 1 cut(s) 261
Cac8I GCNNGC 4 cut(s) 234, 246, 400, 426
Cfr13I GGNCC 1 cut(s) 53
CviJI RGCY 7 cut(s) 37, 150, 205, 232, 288, 377, 424
CviKI_1 RGCY 7 cut(s) 37, 150, 205, 232, 288, 377, 424
DdeI CTNAG 1 cut(s) 151
DpnI GATC 1 cut(s) 96
DpnII GATC 1 cut(s) 94
Ecl136II GAGCTC 1 cut(s) 232
Eco24I GRGCYC 1 cut(s) 234
Eco47I GGWCC 1 cut(s) 53
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 1 cut(s) 26
Eco88I CYCGRG 3 cut(s) 227, 303, 311
EcoICRI GAGCTC 1 cut(s) 232
EcoT38I GRGCYC 1 cut(s) 234
FaiI YATR 3 cut(s) 212, 326, 380
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 1 cut(s) 89
FokI GGATG 1 cut(s) 439
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 1 cut(s) 89
FspBI CTAG 1 cut(s) 296
GluI GCNGC 1 cut(s) 89
HapII CCGG 1 cut(s) 34
HinfI GANTC 1 cut(s) 190
HpaII CCGG 1 cut(s) 34
HphI GGTGA 2 cut(s) 256, 441
Hpy166II GTNNAC 1 cut(s) 409
Hpy188I TCNGA 1 cut(s) 45
Hpy188III TCNNGA 3 cut(s) 71, 187, 227
Hpy8I GTNNAC 1 cut(s) 409
HpyCH4V TGCA 4 cut(s) 248, 344, 428, 441
HpyF3I CTNAG 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 1 cut(s) 94
LmnI GCTCC 3 cut(s) 36, 70, 210
Lsp1109I GCAGC 1 cut(s) 75
LweI GCATC 2 cut(s) 52, 164
MaeI CTAG 1 cut(s) 296
MaeIII GTNAC 1 cut(s) 337
MalI GATC 1 cut(s) 96
MboI GATC 1 cut(s) 94
MboII GAAGA 2 cut(s) 253, 340
MfeI CAATTG 1 cut(s) 162
MhlI GDGCHC 2 cut(s) 234, 312
MluCI AATT 1 cut(s) 162
MnlI CCTC 3 cut(s) 78, 457, 466
MslI CAYNNNNRTG 1 cut(s) 26
MspI CCGG 1 cut(s) 34
MunI CAATTG 1 cut(s) 162
Mva1269I GAATGC 1 cut(s) 344
NdeII GATC 1 cut(s) 94
PaeR7I CTCGAG 3 cut(s) 227, 303, 311
PctI GAATGC 1 cut(s) 344
PfeI GAWTC 1 cut(s) 190
PflMI CCANNNNNTGG 1 cut(s) 118
PkrI GCNGC 1 cut(s) 90
Psp124BI GAGCTC 1 cut(s) 234
PspPI GGNCC 1 cut(s) 53
PspXI VCTCGAGB 2 cut(s) 303, 311
RseI CAYNNNNRTG 1 cut(s) 26
SacI GAGCTC 1 cut(s) 234
SatI GCNGC 1 cut(s) 89
Sau3AI GATC 1 cut(s) 94
Sau96I GGNCC 1 cut(s) 53
SduI GDGCHC 2 cut(s) 234, 312
SetI ASST 8 cut(s) 8, 152, 207, 218, 234, 275, 290, 379
SfaNI GCATC 2 cut(s) 52, 164
Sfr274I CTCGAG 3 cut(s) 227, 303, 311
SinI GGWCC 1 cut(s) 53
SlaI CTCGAG 3 cut(s) 227, 303, 311
SmiMI CAYNNNNRTG 1 cut(s) 26
SmlI CTYRAG 3 cut(s) 227, 303, 311
SmoI CTYRAG 3 cut(s) 227, 303, 311
SpeI ACTAGT 1 cut(s) 295
Sse9I AATT 1 cut(s) 162
SspMI CTAG 1 cut(s) 296
SstI GAGCTC 1 cut(s) 234
TaqI TCGA 3 cut(s) 228, 304, 312
TasI AATT 1 cut(s) 162
TfiI GAWTC 1 cut(s) 190
TscAI CASTG 1 cut(s) 90
TseI GCWGC 1 cut(s) 88
TspDTI ATGAA 1 cut(s) 269
TspGWI ACGGA 1 cut(s) 172
TspRI CASTG 1 cut(s) 90
Van91I CCANNNNNTGG 1 cut(s) 118
VpaK11BI GGWCC 1 cut(s) 53
XhoI CTCGAG 3 cut(s) 227, 303, 311
XmiI GTMKAC 1 cut(s) 408
XspI CTAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.