RLG00000012573

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
20004046 .. 20006526
2481 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012573

Sequence Viewer

Length: 2481 bp
ATGAAACCAACCATCACTCCTCTCTACCTCTACTTGTTCCTCCACATCCTCACTCTCTTTGTCACCGGTCAGTCGCCACCATACATTCCGGTCGACAATATCACCCTCGCCTGCGGCAATTCCGGCCAACATAGCTCCAACGACCTCAGAAAGTGGAGTGGAGATATCGATTCAAAATTCACCCCAATAGATAACGCATCCGAATCCATAGATGCACCACCGTCAGACCAAGCCAGCCAAGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCAAATTCACTTACAAAATTCCCCTCTCTCCCGGCCAAAAATTCATCCGCTTGCATTTCAATCCAGATACATACGCTTCGGAATTCCAATGCCCCAAATCTCTCTTCTCCGTCACCACCGGCGGCTTCACTCTCCTCAAAGACTTCAACGCATCAGTCACTGCCGACGCTTACGGTGAGTCCCCGCTGGTCAGAGAATTCTGTGTGAACATCGAGACAGGACAAAGACTCGAGATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCTTGTCCATGCCCACTAGTTTTTACTACACCGGCTCAATCTCATATCTGATCGGAAACGACACAACTCTGGAGATGGTGTACCGAATCAACGTGGGAGGAGTCCTCATCTCGCCTAACGCAGACACCGGAATGTACCGGAATTGGGACACTGACGAAATTTATTTGGATGATTTAAGTAAAAAAGAAAGCGTGCTACCACAGAACAATACAATAGAGCTCAATTTCTCCAAAGTTCCAGAATACTCTGCCCCAAAAGCAGTTTACACAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTCACATGGATATTTCCCTTAGATCCCGAGTTTTATTACCTCGTGAGACTCCATTTCTGTGAGTTTGAATCTGATATTACCGAGTCCGGAGATCGAGCGTTTCAAATCTTCATGGCCAATCAAACCGCAGAAAATATTGCAGATATTATCCAATGGAGTGGAGCAAATGGGAATCCAGTTTACAGAGACTACGTTGTGGGAATGTTCATGTCTCCGGTTGGAAGAGAGAAGAAAGTTAACCTCTTTCTAGTACTCGCAGCGGTACAGACAGATTCGTATACTAAATACAACGATGCCATCTTGAACGGGCTGGAAATCTTCAAGCTCAGTGACTCGGATGGGAATCTCGCCGGACCACCACCACTGCAGCTCCCGTCACAAAATCCAGATGATATTGAAAATAAGAAGTCGACTCCCATGGTTGCTATCGTTGCCGGTGTAGTTGCCGGCTTCATTACACTCTCTGTTATCAGATTCTTGGTTTCGAGGCGACGATGGAAGTTAAAGGACTCTGGGTCTGGCTCCAGGCAAACGACAAAGCCAACAATGAACCCGGAGCAATTTATGCCTACTTATTTATGTCGTTACTTTCCACTGGAAGAGATCACAGCCGCCACCAAAAACTTCAATGAAACATTCATTATTGGAGCTGGAGGATTTGGCAACGTATACAAAGGATGTATTGATAGTGGAGTCACTCCAGTTGCCATCAAACGACTGAAACCAGAGTCATCGCAGGGTGCCCACGAGTTTAAGACCGAAATTGAGATGCTCTCCCAACTCCGTCATCGCCATTTGGTTTCATTAATTGGATATTGTGTTGATAACGGCGAGATGATCTTAGTGTATGATTACATGGCACACGGAACCCTCCGGGACCATCTCTACCACACCGACAACCCGCCTCTCCCCTGGGAGAAGCGACTTCAGATTTGCATAGGCACAGCTCGAGGGTTGCAATACCTTCATAGTGGAACAAAGGGCACCATCATTCACCGAGATGTGAAGAGCACAAACATATTATTGGATGACAAATGGATGGCCAAAGTTTCCGATTTTGGGCTATCTAAGGGCACGACTGACATTTCCAAAACCCACATCAGCACGGTGGTGAAAGGCAGTTTTGGGTATCTGGACCCAGAATACTACCGCCGACAACGTCTGACTGAGAAGTCAGATGTGTACTCACTTGGTGTAGTGTTGTTTGAGGTATTATGTGCGAGGCTAGCAGTGATTCAGACAGAAGAGCTGATGCAAGTGAGCCTGGCTGAGTGGGCTAAGATCTGTCATCAGAATGGGGACCTTGATCAAATCATTGATGCAAGATTGAGAGGTAAGATTGCAGCCGACTGCCTGAATAAGTTCACTAAGGTAGCTATCAGTTGCATGCGTGATAATGGGACAGAACGGCCGTCCATGAATGATGTTGTAAAGGAGCTTGAGCTTGCATTGCAGCTTCAGCAGAGTGCAGAAGGGAATATTAAATGCACTGAAAGGGATGTTGAAATTGAAACAAGCAGTAGTGAGCAAAGTTGTGCCACCAACGATTCCGTCAAATGTATATCTGCAACAATCTTCTCCGAGATTAACAACCTAAGTGGGAGATGA

Protein Analysis

827

Amino Acids

92.35

Weight (kDa)

5.74

Isoelectric Point (pI)

44.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 37 - 399 8e-31 Malectin-like domain
Pkinase PF00069 504 - 769 2.7e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 506 - 771 2.5e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2044
AccB1I GGYRCC 2 cut(s) 1613, 1856
AccI GTMKAC 4 cut(s) 93, 1151, 1283, 1542
AccIII TCCGGA 1 cut(s) 959
AciI CCGC 9 cut(s) 114, 319, 393, 455, 999, 1133, 1485, 1775, 2023
AclWI GGATC 1 cut(s) 890
AcoI YGGCCR 5 cut(s) 124, 304, 987, 1914, 2282
AcsI RAATTY 7 cut(s) 176, 275, 288, 311, 353, 467, 714
AcuI CTGAAG 2 cut(s) 1784, 2315
AdeI CACNNNGTG 1 cut(s) 2066
AfaI GTAC 6 cut(s) 533, 638, 692, 1125, 1137, 2057
AfiI CCNNNNNNNGG 3 cut(s) 258, 700, 1932
AgeI ACCGGT 1 cut(s) 65
AhdI GACNNNNNGTC 1 cut(s) 1387
AhlI ACTAGT 1 cut(s) 572
AjnI CCWGG 3 cut(s) 1397, 1784, 2136
AjuI GAANNNNNNNTTGG 2 cut(s) 359, 391
AleI CACNNNNGTG 1 cut(s) 1982
Alw21I GWGCWC 2 cut(s) 777, 1886
Alw26I GTCTC 4 cut(s) 479, 913, 1053, 1089
AlwI GGATC 1 cut(s) 890
AlwNI CAGNNNCTG 1 cut(s) 431
Ama87I CYCGRG 3 cut(s) 500, 899, 1821
Aor13HI TCCGGA 1 cut(s) 959
AoxI GGCC 5 cut(s) 124, 304, 987, 1914, 2282
ApeKI GCWGC 4 cut(s) 1130, 1240, 2216, 2326
ApoI RAATTY 7 cut(s) 176, 275, 288, 311, 353, 467, 714
ArsI GACNNNNNNTTYG 2 cut(s) 1788, 1820
AseI ATTAAT 1 cut(s) 1679
AsiGI ACCGGT 1 cut(s) 65
Asp700I GAANNNNTTC 1 cut(s) 2234
AspS9I GGNCC 4 cut(s) 1226, 1750, 2008, 2173
AsuC2I CCSGG 3 cut(s) 303, 1427, 1748
AsuHPI GGTGA 8 cut(s) 55, 94, 172, 376, 458, 499, 1859, 1996
AsuNHI GCTAGC 1 cut(s) 2098
AvaI CYCGRG 3 cut(s) 500, 899, 1821
AvaII GGWCC 4 cut(s) 1226, 1750, 2008, 2173
BaeGI GKGCMC 3 cut(s) 1618, 1859, 1949
BalI TGGCCA 2 cut(s) 989, 1916
BanI GGYRCC 2 cut(s) 1613, 1856
BanII GRGCYC 1 cut(s) 777
BauI CACGAG 2 cut(s) 914, 1619
Bbv12I GWGCWC 2 cut(s) 777, 1886
BbvI GCAGC 4 cut(s) 1142, 1252, 2228, 2338
BceAI ACGGC 3 cut(s) 1717, 2269, 2297
BciT130I CCWGG 3 cut(s) 1399, 1786, 2138
BclI TGATCA 1 cut(s) 2179
BcnI CCSGG 3 cut(s) 303, 1427, 1748
BcoDI GTCTC 4 cut(s) 479, 913, 1053, 1089
BcuI ACTAGT 1 cut(s) 572
BfaI CTAG 3 cut(s) 573, 1121, 2099
BfmI CTRYAG 1 cut(s) 1238
BglII AGATCT 1 cut(s) 2154
BisI GCNGC 7 cut(s) 115, 394, 1131, 1241, 1485, 2217, 2327
BlsI GCNGC 7 cut(s) 116, 395, 1132, 1242, 1486, 2218, 2328
BmcAI AGTACT 1 cut(s) 1125
Bme1390I CCNGG 6 cut(s) 303, 1399, 1427, 1748, 1786, 2138
Bme18I GGWCC 4 cut(s) 1226, 1750, 2008, 2173
BmeRI GACNNNNNGTC 1 cut(s) 1387
BmeT110I CYCGRG 3 cut(s) 500, 899, 1821
BmgT120I GGNCC 4 cut(s) 1226, 1750, 2008, 2173
BmiI GGNNCC 7 cut(s) 1396, 1615, 1741, 1751, 1858, 2010, 2174
BmrFI CCNGG 6 cut(s) 303, 1399, 1427, 1748, 1786, 2138
BmsI GCATC 8 cut(s) 202, 206, 431, 517, 1156, 1632, 2115, 2182
BmtI GCTAGC 1 cut(s) 2102
BplI GAGNNNNNCTC 4 cut(s) 645, 677, 1631, 1663
BpmI CTGGAG 4 cut(s) 647, 1381, 1545, 1557
BpuEI CTTGAG 1 cut(s) 2333
BpuMI CCSGG 3 cut(s) 303, 1427, 1748
Bsa29I ATCGAT 1 cut(s) 168
BsaBI GATNNNNATC 1 cut(s) 1215
BsaJI CCNNGG 3 cut(s) 1290, 1784, 1785
BsaWI WCCGGW 6 cut(s) 65, 88, 683, 693, 959, 1087
BsaXI ACNNNNNCTCC 5 cut(s) 31, 620, 650, 1227, 1257
Bsc4I CCNNNNNNNGG 3 cut(s) 258, 700, 1932
Bse118I RCCGGY 5 cut(s) 65, 389, 587, 1307, 1319
Bse1I ACTGG 3 cut(s) 1049, 1473, 1574
Bse3DI GCAATG 1 cut(s) 2321
Bse8I GATNNNNATC 1 cut(s) 1215
BseAI TCCGGA 1 cut(s) 959
BseBI CCWGG 3 cut(s) 1399, 1786, 2138
BseCI ATCGAT 1 cut(s) 168
BseDI CCNNGG 3 cut(s) 1290, 1784, 1785
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 3 cut(s) 258, 700, 1932
BseMI GCAATG 1 cut(s) 2321
BseMII CTCAG 4 cut(s) 160, 1213, 2031, 2133
BseNI ACTGG 3 cut(s) 1049, 1473, 1574
BseRI GAGGAG 3 cut(s) 9, 395, 669
BseSI GKGCMC 3 cut(s) 1618, 1859, 1949
BseX3I CGGCCG 1 cut(s) 2282
BseXI GCAGC 4 cut(s) 1142, 1252, 2228, 2338
BsgI GTGCAG 1 cut(s) 2361
Bsh1285I CGRYCG 2 cut(s) 93, 2285
BshFI GGCC 5 cut(s) 126, 306, 989, 1916, 2284
BshNI GGYRCC 2 cut(s) 1613, 1856
BshTI ACCGGT 1 cut(s) 65
BshVI ATCGAT 1 cut(s) 168
BsiEI CGRYCG 2 cut(s) 93, 2285
BsiHKAI GWGCWC 2 cut(s) 777, 1886
BsiHKCI CYCGRG 3 cut(s) 500, 899, 1821
BsiWI CGTACG 1 cut(s) 531
BslFI GGGAC 6 cut(s) 227, 436, 716, 1763, 2186, 2287
BslI CCNNNNNNNGG 3 cut(s) 258, 700, 1932
BsmAI GTCTC 4 cut(s) 479, 913, 1053, 1089
BsmFI GGGAC 6 cut(s) 227, 436, 716, 1763, 2186, 2287
BsnI GGCC 5 cut(s) 126, 306, 989, 1916, 2284
BsoBI CYCGRG 3 cut(s) 500, 899, 1821
Bsp1286I GDGCHC 5 cut(s) 777, 1618, 1859, 1886, 1949
Bsp13I TCCGGA 1 cut(s) 959
Bsp143I GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
Bsp19I CCATGG 1 cut(s) 1290
BspACI CCGC 9 cut(s) 114, 319, 393, 455, 999, 1133, 1485, 1775, 2023
BspANI GGCC 5 cut(s) 126, 306, 989, 1916, 2284
BspCNI CTCAG 4 cut(s) 159, 1212, 2032, 2134
BspDI ATCGAT 1 cut(s) 168
BspEI TCCGGA 1 cut(s) 959
BspLI GGNNCC 7 cut(s) 1396, 1615, 1741, 1751, 1858, 2010, 2174
BspMAI CTGCAG 1 cut(s) 1242
BspOI GCTAGC 1 cut(s) 2102
BspPI GGATC 1 cut(s) 890
BspQI GCTCTTC 2 cut(s) 1874, 2112
BspT107I GGYRCC 2 cut(s) 1613, 1856
BsrDI GCAATG 1 cut(s) 2321
BsrFI RCCGGY 5 cut(s) 65, 389, 587, 1307, 1319
BsrI ACTGG 3 cut(s) 1049, 1473, 1574
BssAI RCCGGY 5 cut(s) 65, 389, 587, 1307, 1319
BssECI CCNNGG 3 cut(s) 1290, 1784, 1785
BssMI GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
BssNAI GTATAC 2 cut(s) 1152, 1543
BssSI CACGAG 2 cut(s) 914, 1619
BssT1I CCWWGG 1 cut(s) 1290
Bst1107I GTATAC 2 cut(s) 1152, 1543
Bst2BI CACGAG 2 cut(s) 914, 1619
Bst2UI CCWGG 3 cut(s) 1399, 1786, 2138
Bst4CI ACNGT 3 cut(s) 222, 446, 1981
Bst6I CTCTTC 5 cut(s) 380, 1090, 1467, 1874, 2112
BstAPI GCANNNNNTGC 1 cut(s) 1438
BstC8I GCNNGC 8 cut(s) 112, 235, 323, 749, 1321, 2100, 2261, 2319
BstDSI CCRYGG 1 cut(s) 1290
BstKTI GATC 8 cut(s) 507, 609, 898, 967, 1479, 1713, 2157, 2182
BstMAI GTCTC 4 cut(s) 479, 913, 1053, 1089
BstMBI GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
BstMCI CGRYCG 2 cut(s) 93, 2285
BstMWI GCNNNNNNNGC 9 cut(s) 123, 132, 812, 1304, 1438, 2099, 2147, 2323, 2332
BstNI CCWGG 3 cut(s) 1399, 1786, 2138
BstNSI RCATGY 1 cut(s) 2263
BstSCI CCNGG 6 cut(s) 301, 1397, 1425, 1746, 1784, 2136
BstSFI CTRYAG 1 cut(s) 1238
BstSLI GKGCMC 3 cut(s) 1618, 1859, 1949
BstV1I GCAGC 4 cut(s) 1142, 1252, 2228, 2338
BstX2I RGATCY 2 cut(s) 895, 2154
BstXI CCANNNNNNTGG 1 cut(s) 1031
BstYI RGATCY 2 cut(s) 895, 2154
BstZ17I GTATAC 2 cut(s) 1152, 1543
BstZI CGGCCG 1 cut(s) 2282
Bsu15I ATCGAT 1 cut(s) 168
BsuRI GGCC 5 cut(s) 126, 306, 989, 1916, 2284
BsuTUI ATCGAT 1 cut(s) 168
BtgI CCRYGG 1 cut(s) 1290
BtgZI GCGATG 2 cut(s) 1590, 1646
BtsI GCAGTG 3 cut(s) 429, 1235, 2109
BtsIMutI CAGTG 7 cut(s) 429, 705, 1207, 1235, 1466, 2109, 2361
Cac8I GCNNGC 8 cut(s) 112, 235, 323, 749, 1321, 2100, 2261, 2319
CaiI CAGNNNCTG 1 cut(s) 431
Cfr10I RCCGGY 5 cut(s) 65, 389, 587, 1307, 1319
Cfr13I GGNCC 4 cut(s) 1226, 1750, 2008, 2173
ClaI ATCGAT 1 cut(s) 168
CseI GACGC 1 cut(s) 446
Csp6I GTAC 6 cut(s) 532, 637, 691, 1124, 1136, 2056
CspAI ACCGGT 1 cut(s) 65
CspCI CAANNNNNGTGG 1 cut(s) 2452
CviAII CATG 8 cut(s) 565, 879, 985, 1081, 1291, 1729, 2260, 2290
CviQI GTAC 6 cut(s) 532, 637, 691, 1124, 1136, 2056
DpnI GATC 8 cut(s) 506, 608, 897, 966, 1478, 1712, 2156, 2181
DpnII GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
DraIII CACNNNGTG 1 cut(s) 2066
DrdI GACNNNNNNGTC 1 cut(s) 2044
DriI GACNNNNNGTC 1 cut(s) 1387
DseDI GACNNNNNNGTC 1 cut(s) 2044
EaeI YGGCCR 5 cut(s) 124, 304, 987, 1914, 2282
EagI CGGCCG 1 cut(s) 2282
Eam1104I CTCTTC 5 cut(s) 380, 1090, 1467, 1874, 2112
Eam1105I GACNNNNNGTC 1 cut(s) 1387
EarI CTCTTC 5 cut(s) 380, 1090, 1467, 1874, 2112
Ecl136II GAGCTC 1 cut(s) 775
EclXI CGGCCG 1 cut(s) 2282
Eco130I CCWWGG 1 cut(s) 1290
Eco24I GRGCYC 1 cut(s) 777
Eco32I GATATC 1 cut(s) 166
Eco47I GGWCC 4 cut(s) 1226, 1750, 2008, 2173
Eco52I CGGCCG 1 cut(s) 2282
Eco53kI GAGCTC 1 cut(s) 775
Eco57I CTGAAG 2 cut(s) 1784, 2315
Eco88I CYCGRG 3 cut(s) 500, 899, 1821
EcoICRI GAGCTC 1 cut(s) 775
EcoO109I RGGNCCY 1 cut(s) 2173
EcoRI GAATTC 2 cut(s) 353, 467
EcoRII CCWGG 3 cut(s) 1397, 1784, 2136
EcoRV GATATC 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 1290
EcoT38I GRGCYC 1 cut(s) 777
ErhI CCWWGG 1 cut(s) 1290
FaeI CATG 8 cut(s) 568, 882, 988, 1084, 1294, 1732, 2263, 2293
FaqI GGGAC 6 cut(s) 227, 436, 716, 1763, 2186, 2287
FatI CATG 8 cut(s) 564, 878, 984, 1080, 1290, 1728, 2259, 2289
FauI CCCGC 2 cut(s) 462, 1782
FbaI TGATCA 1 cut(s) 2179
FblI GTMKAC 4 cut(s) 93, 1151, 1283, 1542
Fnu4HI GCNGC 7 cut(s) 115, 394, 1131, 1241, 1485, 2217, 2327
FriOI GRGCYC 1 cut(s) 777
Fsp4HI GCNGC 7 cut(s) 115, 394, 1131, 1241, 1485, 2217, 2327
FspBI CTAG 3 cut(s) 573, 1121, 2099
GluI GCNGC 7 cut(s) 115, 394, 1131, 1241, 1485, 2217, 2327
GsuI CTGGAG 4 cut(s) 647, 1381, 1545, 1557
HaeIII GGCC 5 cut(s) 126, 306, 989, 1916, 2284
HgaI GACGC 1 cut(s) 446
Hin1II CATG 8 cut(s) 568, 882, 988, 1084, 1294, 1732, 2263, 2293
HincII GTYRAC 3 cut(s) 94, 1111, 1284
HindII GTYRAC 3 cut(s) 94, 1111, 1284
HpaI GTTAAC 1 cut(s) 1111
HphI GGTGA 8 cut(s) 55, 94, 172, 376, 458, 499, 1859, 1996
Hpy99I CGWCG 2 cut(s) 440, 1368
HpyAV CCTTC 3 cut(s) 520, 1847, 2339
HpyCH4III ACNGT 3 cut(s) 222, 446, 1981
HpyCH4IV ACGT 4 cut(s) 648, 1065, 1539, 2032
HpyF10VI GCNNNNNNNGC 9 cut(s) 123, 132, 812, 1304, 1438, 2099, 2147, 2323, 2332
HpySE526I ACGT 4 cut(s) 648, 1065, 1539, 2032
Hsp92II CATG 8 cut(s) 568, 882, 988, 1084, 1294, 1732, 2263, 2293
Kpn2I TCCGGA 1 cut(s) 959
KroI GCCGGC 1 cut(s) 1319
KroNI GCCGGC 1 cut(s) 1321
Ksp22I TGATCA 1 cut(s) 2179
KspAI GTTAAC 1 cut(s) 1111
Kzo9I GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
LguI GCTCTTC 2 cut(s) 1874, 2112
LmnI GCTCC 8 cut(s) 140, 275, 1034, 1248, 1400, 1429, 1520, 2308
Lsp1109I GCAGC 4 cut(s) 1142, 1252, 2228, 2338
LweI GCATC 8 cut(s) 202, 206, 431, 517, 1156, 1632, 2115, 2182
MaeI CTAG 3 cut(s) 573, 1121, 2099
MaeII ACGT 4 cut(s) 648, 1065, 1539, 2032
MaeIII GTNAC 7 cut(s) 61, 382, 427, 1202, 1248, 1457, 1567
MalI GATC 8 cut(s) 506, 608, 897, 966, 1478, 1712, 2156, 2181
MboI GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
MboII GAAGA 9 cut(s) 367, 973, 1107, 1114, 1183, 1484, 1891, 2129, 2440
MflI RGATCY 2 cut(s) 895, 2154
MhlI GDGCHC 5 cut(s) 777, 1618, 1859, 1886, 1949
MlsI TGGCCA 2 cut(s) 989, 1916
MluNI TGGCCA 2 cut(s) 989, 1916
MmeI TCCRAC 2 cut(s) 162, 1072
Mox20I TGGCCA 2 cut(s) 989, 1916
MroI TCCGGA 1 cut(s) 959
MroNI GCCGGC 1 cut(s) 1319
MroXI GAANNNNTTC 1 cut(s) 2234
MscI TGGCCA 2 cut(s) 989, 1916
MseI TTAA 7 cut(s) 731, 1110, 1376, 1626, 1679, 2355, 2460
MslI CAYNNNNRTG 5 cut(s) 686, 930, 1872, 1982, 2166
Msp20I TGGCCA 2 cut(s) 989, 1916
MspA1I CMGCKG 2 cut(s) 457, 1133
MspR9I CCNGG 6 cut(s) 303, 1399, 1427, 1748, 1786, 2138
MvaI CCWGG 3 cut(s) 1399, 1786, 2138
MwoI GCNNNNNNNGC 9 cut(s) 123, 132, 812, 1304, 1438, 2099, 2147, 2323, 2332
NaeI GCCGGC 1 cut(s) 1321
NciI CCSGG 3 cut(s) 303, 1427, 1748
NcoI CCATGG 1 cut(s) 1290
NdeII GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
NgoMIV GCCGGC 1 cut(s) 1319
NheI GCTAGC 1 cut(s) 2098
NlaIII CATG 8 cut(s) 568, 882, 988, 1084, 1294, 1732, 2263, 2293
NlaIV GGNNCC 7 cut(s) 1396, 1615, 1741, 1751, 1858, 2010, 2174
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 6 cut(s) 61, 382, 427, 1202, 1248, 1567
NspI RCATGY 1 cut(s) 2263
OliI CACNNNNGTG 1 cut(s) 1982
PaeI GCATGC 1 cut(s) 2263
PaeR7I CTCGAG 2 cut(s) 500, 1821
PasI CCCWGGG 1 cut(s) 1785
PciSI GCTCTTC 2 cut(s) 1874, 2112
PdiI GCCGGC 1 cut(s) 1321
PdmI GAANNNNTTC 1 cut(s) 2234
Pfl23II CGTACG 1 cut(s) 531
PflFI GACNNNGTC 1 cut(s) 2031
PfoI TCCNGGA 1 cut(s) 1746
PinAI ACCGGT 1 cut(s) 65
PkrI GCNGC 7 cut(s) 116, 395, 1132, 1242, 1486, 2218, 2328
PpuMI RGGWCCY 1 cut(s) 2173
PshBI ATTAAT 1 cut(s) 1679
Psp124BI GAGCTC 1 cut(s) 777
Psp5II RGGWCCY 1 cut(s) 2173
Psp6I CCWGG 3 cut(s) 1397, 1784, 2136
PspGI CCWGG 3 cut(s) 1397, 1784, 2136
PspLI CGTACG 1 cut(s) 531
PspN4I GGNNCC 7 cut(s) 1396, 1615, 1741, 1751, 1858, 2010, 2174
PspPI GGNCC 4 cut(s) 1226, 1750, 2008, 2173
PspPPI RGGWCCY 1 cut(s) 2173
PspXI VCTCGAGB 1 cut(s) 1821
PstI CTGCAG 1 cut(s) 1242
PstNI CAGNNNCTG 1 cut(s) 431
PsuI RGATCY 2 cut(s) 895, 2154
PsyI GACNNNGTC 1 cut(s) 2031
RsaI GTAC 6 cut(s) 533, 638, 692, 1125, 1137, 2057
RsaNI GTAC 6 cut(s) 532, 637, 691, 1124, 1136, 2056
RseI CAYNNNNRTG 5 cut(s) 686, 930, 1872, 1982, 2166
SacI GAGCTC 1 cut(s) 777
SalI GTCGAC 2 cut(s) 92, 1282
SapI GCTCTTC 2 cut(s) 1874, 2112
SaqAI TTAA 7 cut(s) 731, 1110, 1376, 1626, 1679, 2355, 2460
SatI GCNGC 7 cut(s) 115, 394, 1131, 1241, 1485, 2217, 2327
Sau3AI GATC 8 cut(s) 504, 606, 895, 964, 1476, 1710, 2154, 2179
Sau96I GGNCC 4 cut(s) 1226, 1750, 2008, 2173
ScaI AGTACT 1 cut(s) 1125
ScrFI CCNGG 6 cut(s) 303, 1399, 1427, 1748, 1786, 2138
SduI GDGCHC 5 cut(s) 777, 1618, 1859, 1886, 1949
SfaNI GCATC 8 cut(s) 202, 206, 431, 517, 1156, 1632, 2115, 2182
SfcI CTRYAG 1 cut(s) 1238
Sfr274I CTCGAG 2 cut(s) 500, 1821
SgrAI CRCCGGYG 1 cut(s) 389
SinI GGWCC 4 cut(s) 1226, 1750, 2008, 2173
SlaI CTCGAG 2 cut(s) 500, 1821
SmiMI CAYNNNNRTG 5 cut(s) 686, 930, 1872, 1982, 2166
SmlI CTYRAG 3 cut(s) 500, 1821, 2312
SmoI CTYRAG 3 cut(s) 500, 1821, 2312
SpeI ACTAGT 1 cut(s) 572
SphI GCATGC 1 cut(s) 2263
SsiI CCGC 9 cut(s) 114, 319, 393, 455, 999, 1133, 1485, 1775, 2023
SspI AATATT 2 cut(s) 1009, 2353
SspMI CTAG 3 cut(s) 573, 1121, 2099
SstI GAGCTC 1 cut(s) 777
StyD4I CCNGG 6 cut(s) 301, 1397, 1425, 1746, 1784, 2136
StyI CCWWGG 1 cut(s) 1290
TaaI ACNGT 3 cut(s) 222, 446, 1981
TaiI ACGT 4 cut(s) 651, 1068, 1542, 2035
TaqI TCGA 9 cut(s) 93, 168, 483, 501, 552, 967, 1283, 1358, 1822
TaqII GACCGA 2 cut(s) 822, 1646
TatI WGTACW 2 cut(s) 1123, 2055
TauI GCSGC 3 cut(s) 117, 396, 1487
Tru1I TTAA 7 cut(s) 731, 1110, 1376, 1626, 1679, 2355, 2460
Tru9I TTAA 7 cut(s) 731, 1110, 1376, 1626, 1679, 2355, 2460
TscAI CASTG 7 cut(s) 436, 712, 1207, 1242, 1473, 2109, 2368
TseFI GTSAC 6 cut(s) 61, 382, 427, 1202, 1248, 1567
TseI GCWGC 4 cut(s) 1130, 1240, 2216, 2326
Tsp45I GTSAC 6 cut(s) 61, 382, 427, 1202, 1248, 1567
TspGWI ACGGA 5 cut(s) 370, 561, 1646, 1752, 2413
TspRI CASTG 7 cut(s) 436, 712, 1207, 1242, 1473, 2109, 2368
Tth111I GACNNNGTC 1 cut(s) 2031
VpaK11BI GGWCC 4 cut(s) 1226, 1750, 2008, 2173
VspI ATTAAT 1 cut(s) 1679
XapI RAATTY 7 cut(s) 176, 275, 288, 311, 353, 467, 714
XceI RCATGY 1 cut(s) 2263
XhoI CTCGAG 2 cut(s) 500, 1821
XmiI GTMKAC 4 cut(s) 93, 1151, 1283, 1542
XmnI GAANNNNTTC 1 cut(s) 2234
XspI CTAG 3 cut(s) 573, 1121, 2099
ZrmI AGTACT 1 cut(s) 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.