Rroxscaffold_2G00085830

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
8085767 .. 8086811
1045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00085830.1

Sequence Viewer

Length: 993 bp
ATGAGGAAGCTAGTTGATACACCAACCAATTTCAAGATACAGTTGCCAAATACCAACATGAAACCAACCATCGCTCCTCTGTACCTTTCCTTGTTTCTTCACATCCTCACCCTACTTGTATCCGGTGATCCACCACCTATCTACACTCCGGTGGAAGATATCACCCTCAACTGTGGCTATTCCGGTAGCTTACAGGATTTCTATAGTAACCGAAATTGGACTGGAGATATCAACTCAAAGTTGTCCCCCATAGAAGCTGGTAACGCTACCTCCCAAGTCAAAGAAGCACCAGCCTCAGCTAGCCAAGTACCATACACCACAACACGGTTATCTCGTTACGAATTTACGTACCGATTTGACAACCTCACTGCTGGCCAGAAGTTCATTCGGTTGTATTTCAACCCAACTTCGTACCCAAACTTCGAGCGCTCCAAAGCTCTCTTCTCCGTCAAAGTTGGTCCATATACGCTTCTCAATGACTTCAATGCTTCAGCTACTGTGGATGCTAATTCGGTGGAGACTCTATATAAAGAATACTGCTTAAACGTTGACGATGAAGGAGAGAGTATTAACATCACGTTCACTCCAAGCACCAAAGCCAAAGATCCTAACTTCTTCTACCTAAGCAAGGGGGTGAAATATCTAAGCACAGAGCAAGGGGTGAAATATCTAAGCAACAAAGTGAACTATTACATCGAAAACAGCATTGCAATGGAGACGGTCTACCGAATCAACGTCGGTGGAATGGCCATCTCGCCGGAGGCAGACACCGGAATGTACCGGACATGGGAAACTGCTGATGAAACTTATTTGGATAATATAAGTAGAGAATTCAACGTGCTACCACAGAACAATACCATTGAACTTAGTTTTGAAGCGGTGCCGGAATACTCTAGCCCCAAAAGCAGTTTACATAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTACAATCTCACCTGGGCATTTCCTATAGATTCTAA

Protein Analysis

330

Amino Acids

37.33

Weight (kDa)

5.16

Isoelectric Point (pI)

35.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 880
AccI GTMKAC 1 cut(s) 723
AciI CCGC 1 cut(s) 878
AclI AACGTT 1 cut(s) 546
AclWI GGATC 2 cut(s) 122, 599
AcoI YGGCCR 2 cut(s) 373, 747
AcsI RAATTY 2 cut(s) 341, 830
AcuI CTGAAG 1 cut(s) 474
AfaI GTAC 5 cut(s) 83, 309, 350, 413, 779
AfeI AGCGCT 1 cut(s) 428
AfiI CCNNNNNNNGG 3 cut(s) 324, 628, 787
AgsI TTSAA 6 cut(s) 34, 400, 484, 835, 863, 875
AjnI CCWGG 1 cut(s) 969
AjuI GAANNNNNNNTTGG 2 cut(s) 425, 457
AleI CACNNNNGTG 1 cut(s) 149
AluBI AGCT 7 cut(s) 10, 189, 257, 299, 437, 494, 958
AluI AGCT 7 cut(s) 10, 189, 257, 299, 437, 494, 958
Alw26I GTCTC 2 cut(s) 512, 710
AlwI GGATC 2 cut(s) 122, 599
AlwNI CAGNNNCTG 1 cut(s) 497
Aor51HI AGCGCT 1 cut(s) 428
AoxI GGCC 2 cut(s) 373, 747
ApoI RAATTY 2 cut(s) 341, 830
AspLEI GCGC 1 cut(s) 429
AspS9I GGNCC 1 cut(s) 458
AsuHPI GGTGA 6 cut(s) 100, 137, 154, 646, 673, 959
AsuNHI GCTAGC 1 cut(s) 299
AvaII GGWCC 1 cut(s) 458
BalI TGGCCA 2 cut(s) 375, 749
BanI GGYRCC 1 cut(s) 880
BarI GAAGNNNNNNTAC 2 cut(s) 404, 436
BbvCI CCTCAGC 1 cut(s) 295
BccI CCATC 3 cut(s) 77, 758, 954
BciT130I CCWGG 1 cut(s) 971
BciVI GTATCC 1 cut(s) 130
BcoDI GTCTC 2 cut(s) 512, 710
BfaI CTAG 3 cut(s) 11, 300, 894
BfmI CTRYAG 2 cut(s) 202, 982
BfoI RGCGCY 1 cut(s) 430
BfuI GTATCC 1 cut(s) 130
Bme1390I CCNGG 1 cut(s) 971
Bme18I GGWCC 1 cut(s) 458
BmgT120I GGNCC 1 cut(s) 458
BmiI GGNNCC 1 cut(s) 882
BmrFI CCNGG 1 cut(s) 971
BmsI GCATC 1 cut(s) 493
BmtI GCTAGC 1 cut(s) 303
BpmI CTGGAG 1 cut(s) 243
Bpu10I CCTNAGC 2 cut(s) 295, 623
BsaAI YACGTR 1 cut(s) 348
BsaJI CCNNGG 1 cut(s) 970
BsaWI WCCGGW 5 cut(s) 122, 148, 182, 770, 780
BsaXI ACNNNNNCTCC 6 cut(s) 58, 88, 254, 284, 568, 598
Bsc4I CCNNNNNNNGG 3 cut(s) 324, 628, 787
Bse1I ACTGG 1 cut(s) 226
Bse3DI GCAATG 2 cut(s) 705, 717
BseBI CCWGG 1 cut(s) 971
BseDI CCNNGG 1 cut(s) 970
BseGI GGATG 3 cut(s) 102, 508, 940
BseLI CCNNNNNNNGG 3 cut(s) 324, 628, 787
BseMI GCAATG 2 cut(s) 705, 717
BseMII CTCAG 1 cut(s) 309
BseNI ACTGG 1 cut(s) 226
BseRI GAGGAG 1 cut(s) 66
BshFI GGCC 2 cut(s) 375, 749
BshNI GGYRCC 1 cut(s) 880
BsiSI CCGG 7 cut(s) 123, 149, 183, 758, 771, 781, 884
BslFI GGGAC 1 cut(s) 229
BslI CCNNNNNNNGG 3 cut(s) 324, 628, 787
BsmAI GTCTC 2 cut(s) 512, 710
BsmBI CGTCTC 1 cut(s) 710
BsmFI GGGAC 1 cut(s) 229
BsnI GGCC 2 cut(s) 375, 749
Bsp143I GATC 2 cut(s) 127, 604
BspACI CCGC 1 cut(s) 878
BspANI GGCC 2 cut(s) 375, 749
BspCNI CTCAG 1 cut(s) 308
BspLI GGNNCC 1 cut(s) 882
BspOI GCTAGC 1 cut(s) 303
BspPI GGATC 2 cut(s) 122, 599
BspT107I GGYRCC 1 cut(s) 880
BsrDI GCAATG 2 cut(s) 705, 717
BsrI ACTGG 1 cut(s) 226
BssECI CCNNGG 1 cut(s) 970
BssMI GATC 2 cut(s) 127, 604
Bst2UI CCWGG 1 cut(s) 971
Bst4CI ACNGT 5 cut(s) 42, 173, 327, 499, 721
Bst6I CTCTTC 1 cut(s) 446
BstBAI YACGTR 1 cut(s) 348
BstC8I GCNNGC 2 cut(s) 301, 373
BstDEI CTNAG 5 cut(s) 295, 623, 644, 671, 866
BstENI CCTNNNNNAGG 1 cut(s) 626
BstF5I GGATG 3 cut(s) 102, 508, 940
BstH2I RGCGCY 1 cut(s) 430
BstHHI GCGC 1 cut(s) 429
BstKTI GATC 2 cut(s) 130, 607
BstMAI GTCTC 2 cut(s) 512, 710
BstMBI GATC 2 cut(s) 127, 604
BstMWI GCNNNNNNNGC 2 cut(s) 263, 903
BstNI CCWGG 1 cut(s) 971
BstSCI CCNGG 1 cut(s) 969
BstSFI CTRYAG 2 cut(s) 202, 982
BstSNI TACGTA 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
BsuI GTATCC 1 cut(s) 130
BsuRI GGCC 2 cut(s) 375, 749
BtgZI GCGATG 1 cut(s) 55
BtsCI GGATG 3 cut(s) 102, 508, 940
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 2 cut(s) 301, 373
CaiI CAGNNNCTG 1 cut(s) 497
CfoI GCGC 1 cut(s) 429
Cfr13I GGNCC 1 cut(s) 458
Csp6I GTAC 5 cut(s) 82, 308, 349, 412, 778
CspCI CAANNNNNGTGG 2 cut(s) 721, 756
CviAII CATG 2 cut(s) 58, 786
CviQI GTAC 5 cut(s) 82, 308, 349, 412, 778
DdeI CTNAG 5 cut(s) 295, 623, 644, 671, 866
DpnI GATC 2 cut(s) 129, 606
DpnII GATC 2 cut(s) 127, 604
EaeI YGGCCR 2 cut(s) 373, 747
Eam1104I CTCTTC 1 cut(s) 446
EarI CTCTTC 1 cut(s) 446
Eco105I TACGTA 1 cut(s) 348
Eco32I GATATC 2 cut(s) 160, 229
Eco47I GGWCC 1 cut(s) 458
Eco47III AGCGCT 1 cut(s) 428
Eco57I CTGAAG 1 cut(s) 474
EcoNI CCTNNNNNAGG 1 cut(s) 626
EcoRI GAATTC 1 cut(s) 830
EcoRII CCWGG 1 cut(s) 969
EcoRV GATATC 2 cut(s) 160, 229
Esp3I CGTCTC 1 cut(s) 710
FaeI CATG 2 cut(s) 61, 789
FaqI GGGAC 1 cut(s) 229
FatI CATG 2 cut(s) 57, 785
FblI GTMKAC 1 cut(s) 723
FokI GGATG 3 cut(s) 89, 515, 947
FspBI CTAG 3 cut(s) 11, 300, 894
GlaI GCGC 1 cut(s) 428
GsuI CTGGAG 1 cut(s) 243
HaeII RGCGCY 1 cut(s) 430
HaeIII GGCC 2 cut(s) 375, 749
HapII CCGG 7 cut(s) 123, 149, 183, 758, 771, 781, 884
HhaI GCGC 1 cut(s) 429
Hin1II CATG 2 cut(s) 61, 789
Hin6I GCGC 1 cut(s) 427
HinP1I GCGC 1 cut(s) 427
HincII GTYRAC 1 cut(s) 550
HindII GTYRAC 1 cut(s) 550
HinfI GANTC 3 cut(s) 520, 729, 987
HpaII CCGG 7 cut(s) 123, 149, 183, 758, 771, 781, 884
HphI GGTGA 6 cut(s) 100, 137, 154, 646, 673, 959
Hpy166II GTNNAC 5 cut(s) 550, 582, 685, 724, 911
Hpy188III TCNNGA 1 cut(s) 34
Hpy8I GTNNAC 5 cut(s) 550, 582, 685, 724, 911
Hpy99I CGWCG 1 cut(s) 740
HpyAV CCTTC 1 cut(s) 551
HpyCH4III ACNGT 5 cut(s) 42, 173, 327, 499, 721
HpyCH4IV ACGT 5 cut(s) 347, 546, 578, 735, 837
HpyCH4V TGCA 1 cut(s) 710
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 903
HpyF3I CTNAG 5 cut(s) 295, 623, 644, 671, 866
HpySE526I ACGT 5 cut(s) 347, 546, 578, 735, 837
Hsp92II CATG 2 cut(s) 61, 789
HspAI GCGC 1 cut(s) 427
Kzo9I GATC 2 cut(s) 127, 604
LmnI GCTCC 2 cut(s) 79, 434
LweI GCATC 1 cut(s) 493
MaeI CTAG 3 cut(s) 11, 300, 894
MaeII ACGT 5 cut(s) 347, 546, 578, 735, 837
MaeIII GTNAC 3 cut(s) 206, 260, 335
MalI GATC 2 cut(s) 129, 606
MboI GATC 2 cut(s) 127, 604
MboII GAAGA 4 cut(s) 89, 167, 433, 607
MflI RGATCY 1 cut(s) 604
MlsI TGGCCA 2 cut(s) 375, 749
MluCI AATT 5 cut(s) 28, 214, 341, 508, 830
MluNI TGGCCA 2 cut(s) 375, 749
MlyI GAGTC 1 cut(s) 514
MnlI CCTC 7 cut(s) 87, 116, 176, 280, 304, 374, 754
Mox20I TGGCCA 2 cut(s) 375, 749
MscI TGGCCA 2 cut(s) 375, 749
MseI TTAA 2 cut(s) 542, 570
MslI CAYNNNNRTG 3 cut(s) 149, 710, 773
Msp20I TGGCCA 2 cut(s) 375, 749
MspI CCGG 7 cut(s) 123, 149, 183, 758, 771, 781, 884
MspR9I CCNGG 1 cut(s) 971
MvaI CCWGG 1 cut(s) 971
MwoI GCNNNNNNNGC 2 cut(s) 263, 903
NdeII GATC 2 cut(s) 127, 604
NheI GCTAGC 1 cut(s) 299
NlaIII CATG 2 cut(s) 61, 789
NlaIV GGNNCC 1 cut(s) 882
OliI CACNNNNGTG 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 331
PfeI GAWTC 2 cut(s) 729, 987
PleI GAGTC 1 cut(s) 514
PpsI GAGTC 1 cut(s) 514
Ppu21I YACGTR 1 cut(s) 348
Psp1406I AACGTT 1 cut(s) 546
Psp6I CCWGG 1 cut(s) 969
PspGI CCWGG 1 cut(s) 969
PspN4I GGNNCC 1 cut(s) 882
PspPI GGNCC 1 cut(s) 458
PstNI CAGNNNCTG 1 cut(s) 497
PsuI RGATCY 1 cut(s) 604
RsaI GTAC 5 cut(s) 83, 309, 350, 413, 779
RsaNI GTAC 5 cut(s) 82, 308, 349, 412, 778
RseI CAYNNNNRTG 3 cut(s) 149, 710, 773
SaqAI TTAA 2 cut(s) 542, 570
Sau3AI GATC 2 cut(s) 127, 604
Sau96I GGNCC 1 cut(s) 458
SchI GAGTC 1 cut(s) 514
ScrFI CCNGG 1 cut(s) 971
SfaNI GCATC 1 cut(s) 493
SfcI CTRYAG 2 cut(s) 202, 982
SinI GGWCC 1 cut(s) 458
SmiMI CAYNNNNRTG 3 cut(s) 149, 710, 773
SnaBI TACGTA 1 cut(s) 348
Sse9I AATT 5 cut(s) 28, 214, 341, 508, 830
SsiI CCGC 1 cut(s) 878
SspMI CTAG 3 cut(s) 11, 300, 894
StyD4I CCNGG 1 cut(s) 969
TaaI ACNGT 5 cut(s) 42, 173, 327, 499, 721
TaiI ACGT 5 cut(s) 350, 549, 581, 738, 840
TaqI TCGA 2 cut(s) 423, 696
TaqII GACCGA 1 cut(s) 913
TasI AATT 5 cut(s) 28, 214, 341, 508, 830
TfiI GAWTC 2 cut(s) 729, 987
Tru1I TTAA 2 cut(s) 542, 570
Tru9I TTAA 2 cut(s) 542, 570
TscAI CASTG 1 cut(s) 373
TspDTI ATGAA 5 cut(s) 74, 373, 570, 816, 951
TspGWI ACGGA 1 cut(s) 436
TspRI CASTG 1 cut(s) 373
VpaK11BI GGWCC 1 cut(s) 458
XagI CCTNNNNNAGG 1 cut(s) 626
XapI RAATTY 2 cut(s) 341, 830
XmiI GTMKAC 1 cut(s) 723
XspI CTAG 3 cut(s) 11, 300, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.