Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

80331416 .. 80334389

Gene Structure 2974 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53327

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2646 bp

ATGAAAACAATCATCACTCCTCTCTACCTCTCCTTGTTCCTCCACATCCTCACTCTCTTCGTCACCGCTCAGTCGCCACCATACACTCCGGTCGACAATATCGTCCTCGCCTGTGGCAATTCCGGCCAACCGACCTCTAATGACCTCAGAAAGTGGAGTGGAGATATCAACTCAAAATTCACCCCAATAGGTAACGCATCCCAATCCATAGATGCACCGCGGTCGGGCACAGCGAGCCAAGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCGAATTCACTTACAAAATTCCCCTCTCTCGCGGCCAAAAATTCATCCGCTTGCATTTCAATCCAGATACATACACCCCGGATTTCCGACGCTCCAATTCCCTCTTCTCCGTCACCGCCGGCGGCTTCACTCTCCTCAAAGACTTCAACGCCTCCGTCACCGCCGACGCTTTCGGCGAGTCCCCGCTGGTCAGAGAATTCTGTGTAAACATCGAGACAGGACAGAGACTCGAGATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCAATGCCCGCCGGTTTTTACTATACTTCTTCAGCTAATTTTGTCGACACCGGCGCAAGGTCATATCCGATCGAAAACAACACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGCGGAGGCCCCATCTCGCCGAACACAGACACCGGAATGTACCGGAATTGGGACACCGCAGACGAAATTTATTTGGATGATAGAAGTAAAAAATTGAGCGTGCTACCACAGAACAATACAATCGAGCTCAATTTCGTCGAAGTTCCAGAATACTCTGCCCCAAAACCAGTTTACACAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTCACATGGGTATTTCCCTTAGATCCCAAGTTTTATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGATATTACCAAGTACGGTGATCGATCGTTTCAAATCTTCATGGCCAATCAAACCGCAGAAGAACTTGCAGATGTCATCGGATGGAGTGGAGCAAATGGGAATCCAGTTTACAGAGACTACGTTGTGGGAATGTTCATGCCTCCGGTTGGAAACCAGAAGAAAGTTAAACTCTTTCTAGTACTCGCAGCGCTGCAGAGAGATTCGTATACTAAATACAACGATGTCATCTTGAACGGGCTAGAAATCTTCAAGCTCAATGACACGAGTGGGAATCTTGCCGGACCCAACCCCGACCCACCTCCGGTGAAACCACCAAAGGTACCACCGAAGAGCCCCAGTAAGAAAAAGTCTGCTCCTATGGCAGCTATCATTGCAGGCGTAGTTTCCGGTTTACTTATGCTCTCTGTTCTCGGATTTTTTGTTTTCCGGCGAGGGAGAAAGTCCAAGGACTATAGCTCAAGTCAAGTAAAGTGGGGTCCGCTTTCTTTTTCAACGACTACTAAGTCCTCCAAGTCCACCACGTCTTACGGTTCATCTCTGCCGTCGGAGCTGTGTCATCACTTTTCATTGCCGGAGATCAGAGCCGCCACGCAAAACTTTGATGAATCGAACGTTATTGGGCGTGGCGGGTTTGGTAACGTGTACAAAGGTACCATCAACGGTGCGTCCACCCCCTTTGCGATCAAACGGCTGAAAGCGGAGTCGTCACAGGGTGCCCTTGAGTTCAAGACGGAGATCGAGTTGCTCTCCCAACTGCGTCACGTCCATCTCGTGTCTCTGGTCGGGTATTGTGACGACAACGGTGAGATGATTTTGGTGTATGACTACATGGAAAATGGGACCCTACGCGATCATTTGTACAACTCCGAAAATCCACCTCTTCCTTGGGAACAAAGGCTTCAAGTTTGTATTGGTGCGGCGCGTGGGTTGCACTACCTTCACACTGGTGTCAAGTGTATGATCATTCACCGAGATGTGAAGAGCACGAACATCTTGTTGGATGATAAATGGGTGGCCAAGGTCGCTGATTTTGGGTTGTCGAAAATGGGCACGACCACCATGTCTAAGACCCACATCAGCACCATGGTCAAGGGTAGTTTCGGCTATCTCGACCCGGAGTACTATCGTCGTCAACAGTTGACTGAGAAGTCTGATGTGTACTCATTCGGAGTAGTATTGTGTGAGGTCTTGTGTGCTAGGCCGGCTTTGATCCGTACAACGGACAAGAAGCAAATGAACCTAGCTGCATGGTTTAAGACCTGTCACGGAAACGGAACGCTTGACCAAATCATTGACCCTAATTTGAGGGGTAAGATTGTAAATGAGTGCTTGGACAAGTTTGTTGAAATTGCAATTAGTTGTATGCATGATAATGGGAGTGAACGACCGTCCATGAATGATGTTATATGGGCGCTTGAGTGTGCATTAAAACTTCAAGAGACCGTAGAGGGTTCGGATTTGGATTTCAATGCCGGAAAGAAGGGTGAAGATGAGGCTTCAATGCTGAATGATAGTGATGCAGGGTTTAGTGGCACATGGGGAGACTCGTTAGGTTCCAATAACAGCAGGGTGACCAAAACTAGTAGTAGTTACCAAAATTCTAGTGCTAGTGATTCCATTAAAGGGTTGTCAGGTACAATCTTCTCTGAGATCTACGAACCCAATGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

881

Amino Acids

97.54

Weight (kDa)

7.51

Isoelectric Point (pI)

39.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 408	3.2e-27	Malectin-like domain
Pkinase	PF00069	526 - 792	5.4e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	528 - 793	2.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	101, 1474, 2032, 2119
Acc65I	GGTACC	2 cut(s)	1291, 1622
AccB1I	GGYRCC	3 cut(s)	1291, 1622, 1685
AccBSI	CCGCTC	1 cut(s)	68
AccI	GTMKAC	3 cut(s)	93, 606, 1178
AccII	CGCG	4 cut(s)	220, 303, 1821, 1894
AclI	AACGTT	1 cut(s)	1584
AclWI	GGATC	2 cut(s)	917, 2176
AcoI	YGGCCR	4 cut(s)	124, 304, 1014, 1986
AcsI	RAATTY	7 cut(s)	176, 275, 288, 311, 467, 741, 2569
AcuI	CTGAAG	1 cut(s)	576
AdeI	CACNNNGTG	1 cut(s)	1685
AfeI	AGCGCT	1 cut(s)	1161
AfiI	CCNNNNNNNGG	9 cut(s)	224, 258, 618, 724, 907, 1118, 1273, 2191, 2595
AflIII	ACRYGT	1 cut(s)	1611
AhlI	ACTAGT	1 cut(s)	2552
AjiI	CACGTC	2 cut(s)	1494, 1735
AjnI	CCWGG	1 cut(s)	939
AjuI	GAANNNNNNNTTGG	4 cut(s)	359, 391, 1952, 1984
AleI	CACNNNNGTG	1 cut(s)	1917
Alw21I	GWGCWC	2 cut(s)	804, 1958
Alw26I	GTCTC	7 cut(s)	479, 490, 940, 1080, 1752, 2405, 2508
AlwI	GGATC	2 cut(s)	917, 2176
Ama87I	CYCGRG	1 cut(s)	500
Aor51HI	AGCGCT	1 cut(s)	1161
AoxI	GGCC	6 cut(s)	124, 304, 682, 1014, 1986, 2171
ApeKI	GCWGC	4 cut(s)	1157, 1162, 1334, 2216
ApoI	RAATTY	7 cut(s)	176, 275, 288, 311, 467, 741, 2569
Asp718I	GGTACC	2 cut(s)	1291, 1622
AspLEI	GCGC	4 cut(s)	617, 1162, 1894, 2386
AspS9I	GGNCC	4 cut(s)	683, 1253, 1448, 1812
AsuC2I	CCSGG	2 cut(s)	350, 2087
AvaI	CYCGRG	1 cut(s)	500
AvaII	GGWCC	3 cut(s)	1253, 1448, 1812
BaeGI	GKGCMC	3 cut(s)	230, 1690, 2024
BaeI	ACNNNNGTAYC	2 cut(s)	1606, 1639
BalI	TGGCCA	2 cut(s)	1016, 1988
BanI	GGYRCC	3 cut(s)	1291, 1622, 1685
BanII	GRGCYC	2 cut(s)	804, 1307
BauI	CACGAG	2 cut(s)	1234, 1742
Bbv12I	GWGCWC	2 cut(s)	804, 1958
BbvI	GCAGC	4 cut(s)	1149, 1169, 1346, 2203
BccI	CCATC	6 cut(s)	649, 695, 890, 1047, 1634, 1746
BceAI	ACGGC	2 cut(s)	1498, 1676
BcgI	CGANNNNNNTGC	2 cut(s)	204, 238
BciT130I	CCWGG	1 cut(s)	941
BclI	TGATCA	1 cut(s)	1932
BcnI	CCSGG	2 cut(s)	350, 2087
BcoDI	GTCTC	7 cut(s)	479, 490, 940, 1080, 1752, 2405, 2508
BcuI	ACTAGT	1 cut(s)	2552
BfaI	CTAG	7 cut(s)	1148, 1211, 2169, 2213, 2553, 2574, 2580
BfmI	CTRYAG	2 cut(s)	1163, 1423
BfoI	RGCGCY	2 cut(s)	1163, 2387
BglII	AGATCT	1 cut(s)	2622
BisI	GCNGC	8 cut(s)	304, 394, 1158, 1163, 1335, 1557, 1890, 2217
BlsI	GCNGC	8 cut(s)	305, 395, 1159, 1164, 1336, 1558, 1891, 2218
BmcAI	AGTACT	2 cut(s)	1152, 2093
Bme1390I	CCNGG	3 cut(s)	350, 941, 2087
Bme18I	GGWCC	3 cut(s)	1253, 1448, 1812
BmeT110I	CYCGRG	1 cut(s)	500
BmgBI	CACGTC	2 cut(s)	1494, 1735
BmgT120I	GGNCC	4 cut(s)	683, 1253, 1448, 1812
BmiI	GGNNCC	9 cut(s)	685, 1255, 1293, 1449, 1624, 1687, 1813, 1814, 2527
BmrFI	CCNGG	3 cut(s)	350, 941, 2087
BmrI	ACTGGG	1 cut(s)	1302
BmsI	GCATC	4 cut(s)	202, 206, 517, 2479
BmuI	ACTGGG	1 cut(s)	1302
BplI	GAGNNNNNCTC	2 cut(s)	1703, 1735
BpmI	CTGGAG	1 cut(s)	671
BpuEI	CTTGAG	3 cut(s)	1414, 1712, 2408
BpuMI	CCSGG	2 cut(s)	350, 2087
Bsa29I	ATCGAT	1 cut(s)	994
BsaI	GGTCTC	1 cut(s)	2405
BsaJI	CCNNGG	6 cut(s)	218, 348, 1416, 1856, 1989, 2055
BsaWI	WCCGGW	6 cut(s)	88, 707, 717, 1114, 1273, 1358
BsaXI	ACNNNNNCTCC	4 cut(s)	644, 674, 1697, 1727
Bsc4I	CCNNNNNNNGG	9 cut(s)	224, 258, 618, 724, 907, 1118, 1273, 2191, 2595
Bse118I	RCCGGY	4 cut(s)	389, 572, 611, 2173
Bse1I	ACTGG	4 cut(s)	842, 1076, 1308, 1921
Bse3DI	GCAATG	2 cut(s)	1341, 1538
BseBI	CCWGG	1 cut(s)	941
BseCI	ATCGAT	1 cut(s)	994
BseDI	CCNNGG	6 cut(s)	218, 348, 1416, 1856, 1989, 2055
BseGI	GGATG	7 cut(s)	45, 197, 315, 757, 876, 1058, 1978
BseLI	CCNNNNNNNGG	9 cut(s)	224, 258, 618, 724, 907, 1118, 1273, 2191, 2595
BseMI	GCAATG	2 cut(s)	1341, 1538
BseMII	CTCAG	4 cut(s)	83, 160, 2106, 2610
BseNI	ACTGG	4 cut(s)	842, 1076, 1308, 1921
BseRI	GAGGAG	2 cut(s)	9, 395
BseSI	GKGCMC	3 cut(s)	230, 1690, 2024
BseXI	GCAGC	4 cut(s)	1149, 1169, 1346, 2203
Bsh1236I	CGCG	4 cut(s)	220, 303, 1821, 1894
Bsh1285I	CGRYCG	5 cut(s)	93, 224, 633, 998, 2360
BshFI	GGCC	6 cut(s)	126, 306, 684, 1016, 1988, 2173
BshNI	GGYRCC	3 cut(s)	1291, 1622, 1685
BshVI	ATCGAT	1 cut(s)	994
BsiEI	CGRYCG	5 cut(s)	93, 224, 633, 998, 2360
BsiHKAI	GWGCWC	2 cut(s)	804, 1958
BsiHKCI	CYCGRG	1 cut(s)	500
BsiWI	CGTACG	1 cut(s)	531
BslFI	GGGAC	4 cut(s)	227, 436, 740, 1825
BslI	CCNNNNNNNGG	9 cut(s)	224, 258, 618, 724, 907, 1118, 1273, 2191, 2595
BsmAI	GTCTC	7 cut(s)	479, 490, 940, 1080, 1752, 2405, 2508
BsmFI	GGGAC	4 cut(s)	227, 436, 740, 1825
BsnI	GGCC	6 cut(s)	126, 306, 684, 1016, 1988, 2173
Bso31I	GGTCTC	1 cut(s)	2405
BsoBI	CYCGRG	1 cut(s)	500
Bsp1286I	GDGCHC	6 cut(s)	230, 804, 1307, 1690, 1958, 2024
Bsp1407I	TGTACA	2 cut(s)	1614, 1830
Bsp19I	CCATGG	1 cut(s)	2055
BspANI	GGCC	6 cut(s)	126, 306, 684, 1016, 1988, 2173
BspCNI	CTCAG	4 cut(s)	82, 159, 2107, 2611
BspDI	ATCGAT	1 cut(s)	994
BspFNI	CGCG	4 cut(s)	220, 303, 1821, 1894
BspLI	GGNNCC	9 cut(s)	685, 1255, 1293, 1449, 1624, 1687, 1813, 1814, 2527
BspMAI	CTGCAG	1 cut(s)	1167
BspPI	GGATC	2 cut(s)	917, 2176
BspQI	GCTCTTC	2 cut(s)	1295, 1946
BspT107I	GGYRCC	3 cut(s)	1291, 1622, 1685
BspTNI	GGTCTC	1 cut(s)	2405
BsrBI	CCGCTC	1 cut(s)	68
BsrDI	GCAATG	2 cut(s)	1341, 1538
BsrFI	RCCGGY	4 cut(s)	389, 572, 611, 2173
BsrGI	TGTACA	2 cut(s)	1614, 1830
BsrI	ACTGG	4 cut(s)	842, 1076, 1308, 1921
BssAI	RCCGGY	4 cut(s)	389, 572, 611, 2173
BssECI	CCNNGG	6 cut(s)	218, 348, 1416, 1856, 1989, 2055
BssNAI	GTATAC	1 cut(s)	1179
BssSI	CACGAG	2 cut(s)	1234, 1742
BssT1I	CCWWGG	4 cut(s)	1416, 1856, 1989, 2055
Bst1107I	GTATAC	1 cut(s)	1179
Bst2BI	CACGAG	2 cut(s)	1234, 1742
Bst2UI	CCWGG	1 cut(s)	941
Bst4CI	ACNGT	7 cut(s)	989, 1502, 1634, 1775, 2109, 2361, 2416
Bst6I	CTCTTC	5 cut(s)	62, 380, 1295, 1857, 1946
BstAUI	TGTACA	2 cut(s)	1614, 1830
BstC8I	GCNNGC	7 cut(s)	235, 323, 391, 570, 776, 1348, 2175
BstDEI	CTNAG	7 cut(s)	69, 146, 919, 1473, 2037, 2115, 2619
BstDSI	CCRYGG	2 cut(s)	218, 2055
BstEII	GGTNACC	1 cut(s)	2542
BstF5I	GGATG	7 cut(s)	45, 197, 315, 757, 876, 1058, 1978
BstFNI	CGCG	4 cut(s)	220, 303, 1821, 1894
BstH2I	RGCGCY	2 cut(s)	1163, 2387
BstHHI	GCGC	4 cut(s)	617, 1162, 1894, 2386
BstMAI	GTCTC	7 cut(s)	479, 490, 940, 1080, 1752, 2405, 2508
BstMCI	CGRYCG	5 cut(s)	93, 224, 633, 998, 2360
BstMWI	GCNNNNNNNGC	8 cut(s)	123, 234, 1331, 1343, 1519, 1900, 1994, 2174
BstNI	CCWGG	1 cut(s)	941
BstPI	GGTNACC	1 cut(s)	2542
BstSCI	CCNGG	3 cut(s)	348, 939, 2085
BstSFI	CTRYAG	2 cut(s)	1163, 1423
BstSLI	GKGCMC	3 cut(s)	230, 1690, 2024
BstUI	CGCG	4 cut(s)	220, 303, 1821, 1894
BstV1I	GCAGC	4 cut(s)	1149, 1169, 1346, 2203
BstX2I	RGATCY	2 cut(s)	922, 2622
BstYI	RGATCY	2 cut(s)	922, 2622
BstZ17I	GTATAC	1 cut(s)	1179
Bsu15I	ATCGAT	1 cut(s)	994
BsuRI	GGCC	6 cut(s)	126, 306, 684, 1016, 1988, 2173
BsuTUI	ATCGAT	1 cut(s)	994
BtgI	CCRYGG	2 cut(s)	218, 2055
BtrI	CACGTC	2 cut(s)	1494, 1735
BtsCI	GGATG	7 cut(s)	45, 197, 315, 757, 876, 1058, 1978
BtsIMutI	CAGTG	1 cut(s)	1914
Cac8I	GCNNGC	7 cut(s)	235, 323, 391, 570, 776, 1348, 2175
CfoI	GCGC	4 cut(s)	617, 1162, 1894, 2386
Cfr10I	RCCGGY	4 cut(s)	389, 572, 611, 2173
Cfr13I	GGNCC	4 cut(s)	683, 1253, 1448, 1812
Cfr42I	CCGCGG	1 cut(s)	221
ClaI	ATCGAT	1 cut(s)	994
CseI	GACGC	4 cut(s)	369, 446, 1626, 1718
CsiI	ACCWGGT	1 cut(s)	939
CspCI	CAANNNNNGTGG	4 cut(s)	1424, 1459, 1630, 1665
DdeI	CTNAG	7 cut(s)	69, 146, 919, 1473, 2037, 2115, 2619
DraIII	CACNNNGTG	1 cut(s)	1685
DrdI	GACNNNNNNGTC	4 cut(s)	101, 1474, 2032, 2119
DseDI	GACNNNNNNGTC	4 cut(s)	101, 1474, 2032, 2119
EaeI	YGGCCR	4 cut(s)	124, 304, 1014, 1986
Eam1104I	CTCTTC	5 cut(s)	62, 380, 1295, 1857, 1946
EarI	CTCTTC	5 cut(s)	62, 380, 1295, 1857, 1946
EciI	GGCGGA	1 cut(s)	693
Ecl136II	GAGCTC	1 cut(s)	802
Eco130I	CCWWGG	4 cut(s)	1416, 1856, 1989, 2055
Eco24I	GRGCYC	2 cut(s)	804, 1307
Eco31I	GGTCTC	1 cut(s)	2405
Eco32I	GATATC	1 cut(s)	166
Eco47I	GGWCC	3 cut(s)	1253, 1448, 1812
Eco47III	AGCGCT	1 cut(s)	1161
Eco53kI	GAGCTC	1 cut(s)	802
Eco57I	CTGAAG	1 cut(s)	576
Eco88I	CYCGRG	1 cut(s)	500
Eco91I	GGTNACC	1 cut(s)	2542
EcoICRI	GAGCTC	1 cut(s)	802
EcoO109I	RGGNCCY	2 cut(s)	683, 1812
EcoO65I	GGTNACC	1 cut(s)	2542
EcoRI	GAATTC	2 cut(s)	275, 467
EcoRII	CCWGG	1 cut(s)	939
EcoRV	GATATC	1 cut(s)	166
EcoT14I	CCWWGG	4 cut(s)	1416, 1856, 1989, 2055
EcoT22I	ATGCAT	1 cut(s)	2340
EcoT38I	GRGCYC	2 cut(s)	804, 1307
ErhI	CCWWGG	4 cut(s)	1416, 1856, 1989, 2055
FaqI	GGGAC	4 cut(s)	227, 436, 740, 1825
FauI	CCCGC	3 cut(s)	462, 577, 1592
FbaI	TGATCA	1 cut(s)	1932
FblI	GTMKAC	3 cut(s)	93, 606, 1178
Fnu4HI	GCNGC	8 cut(s)	304, 394, 1158, 1163, 1335, 1557, 1890, 2217
FokI	GGATG	7 cut(s)	32, 184, 302, 764, 883, 1065, 1985
FriOI	GRGCYC	2 cut(s)	804, 1307
Fsp4HI	GCNGC	8 cut(s)	304, 394, 1158, 1163, 1335, 1557, 1890, 2217
FspBI	CTAG	7 cut(s)	1148, 1211, 2169, 2213, 2553, 2574, 2580
GlaI	GCGC	4 cut(s)	616, 1161, 1893, 2385
GluI	GCNGC	8 cut(s)	304, 394, 1158, 1163, 1335, 1557, 1890, 2217
GsuI	CTGGAG	1 cut(s)	671
HaeII	RGCGCY	2 cut(s)	1163, 2387
HaeIII	GGCC	6 cut(s)	126, 306, 684, 1016, 1988, 2173
HgaI	GACGC	4 cut(s)	369, 446, 1626, 1718
HhaI	GCGC	4 cut(s)	617, 1162, 1894, 2386
Hin6I	GCGC	4 cut(s)	615, 1160, 1892, 2384
HinP1I	GCGC	4 cut(s)	615, 1160, 1892, 2384
HincII	GTYRAC	4 cut(s)	94, 607, 2105, 2112
HindII	GTYRAC	4 cut(s)	94, 607, 2105, 2112
Hpy188III	TCNNGA	9 cut(s)	335, 484, 502, 650, 821, 1201, 1699, 2081, 2408
Hpy99I	CGWCG	6 cut(s)	363, 440, 677, 815, 1519, 2103
HpyAV	CCTTC	3 cut(s)	520, 1919, 2446
HpyCH4III	ACNGT	7 cut(s)	989, 1502, 1634, 1775, 2109, 2361, 2416
HpyCH4IV	ACGT	6 cut(s)	672, 1092, 1493, 1584, 1611, 1734
HpyF10VI	GCNNNNNNNGC	8 cut(s)	123, 234, 1331, 1343, 1519, 1900, 1994, 2174
HpyF3I	CTNAG	7 cut(s)	69, 146, 919, 1473, 2037, 2115, 2619
HpySE526I	ACGT	6 cut(s)	672, 1092, 1493, 1584, 1611, 1734
HspAI	GCGC	4 cut(s)	615, 1160, 1892, 2384
KflI	GGGWCCC	1 cut(s)	1812
KpnI	GGTACC	2 cut(s)	1295, 1626
KroI	GCCGGC	2 cut(s)	389, 2173
KroNI	GCCGGC	2 cut(s)	391, 2175
Ksp22I	TGATCA	1 cut(s)	1932
KspI	CCGCGG	1 cut(s)	221
LguI	GCTCTTC	2 cut(s)	1295, 1946
LmnI	GCTCC	5 cut(s)	275, 368, 1061, 1330, 1519
Lsp1109I	GCAGC	4 cut(s)	1149, 1169, 1346, 2203
LweI	GCATC	4 cut(s)	202, 206, 517, 2479
MabI	ACCWGGT	1 cut(s)	939
MaeI	CTAG	7 cut(s)	1148, 1211, 2169, 2213, 2553, 2574, 2580
MaeII	ACGT	6 cut(s)	672, 1092, 1493, 1584, 1611, 1734
MbiI	CCGCTC	1 cut(s)	68
MflI	RGATCY	2 cut(s)	922, 2622
MhlI	GDGCHC	6 cut(s)	230, 804, 1307, 1690, 1958, 2024
MlsI	TGGCCA	2 cut(s)	1016, 1988
MluNI	TGGCCA	2 cut(s)	1016, 1988
MlyI	GAGTC	5 cut(s)	458, 492, 942, 1682, 2510
MmeI	TCCRAC	4 cut(s)	382, 1099, 1497, 1950
Mox20I	TGGCCA	2 cut(s)	1016, 1988
Mph1103I	ATGCAT	1 cut(s)	2340
MreI	CGCCGGCG	1 cut(s)	389
MroNI	GCCGGC	2 cut(s)	389, 2173
MscI	TGGCCA	2 cut(s)	1016, 1988
MseI	TTAA	4 cut(s)	1137, 2226, 2399, 2592
MslI	CAYNNNNRTG	5 cut(s)	710, 957, 1917, 1944, 2343
Msp20I	TGGCCA	2 cut(s)	1016, 1988
MspA1I	CMGCKG	2 cut(s)	220, 457
MspR9I	CCNGG	3 cut(s)	350, 941, 2087
MvaI	CCWGG	1 cut(s)	941
MvnI	CGCG	4 cut(s)	220, 303, 1821, 1894
MwoI	GCNNNNNNNGC	8 cut(s)	123, 234, 1331, 1343, 1519, 1900, 1994, 2174
NaeI	GCCGGC	2 cut(s)	391, 2175
NciI	CCSGG	2 cut(s)	350, 2087
NcoI	CCATGG	1 cut(s)	2055
NgoMIV	GCCGGC	2 cut(s)	389, 2173
NlaIV	GGNNCC	9 cut(s)	685, 1255, 1293, 1449, 1624, 1687, 1813, 1814, 2527
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	8 cut(s)	61, 382, 427, 1677, 1730, 1763, 2234, 2542
NsiI	ATGCAT	1 cut(s)	2340
OliI	CACNNNNGTG	1 cut(s)	1917
PaeR7I	CTCGAG	1 cut(s)	500
PciSI	GCTCTTC	2 cut(s)	1295, 1946
PcsI	WCGNNNNNNNCGW	5 cut(s)	99, 230, 444, 1740, 2079
PdiI	GCCGGC	2 cut(s)	391, 2175
PfeI	GAWTC	8 cut(s)	549, 666, 968, 1072, 1172, 1243, 1577, 2585
Pfl23II	CGTACG	1 cut(s)	531
PkrI	GCNGC	8 cut(s)	305, 395, 1159, 1164, 1336, 1558, 1891, 2218
Ple19I	CGATCG	2 cut(s)	633, 998
PleI	GAGTC	5 cut(s)	457, 492, 942, 1681, 2510
PpsI	GAGTC	5 cut(s)	457, 492, 942, 1681, 2510
PpuMI	RGGWCCY	1 cut(s)	1812
Psp124BI	GAGCTC	1 cut(s)	804
Psp1406I	AACGTT	1 cut(s)	1584
Psp5II	RGGWCCY	1 cut(s)	1812
Psp6I	CCWGG	1 cut(s)	939
PspEI	GGTNACC	1 cut(s)	2542
PspGI	CCWGG	1 cut(s)	939
PspLI	CGTACG	1 cut(s)	531
PspN4I	GGNNCC	9 cut(s)	685, 1255, 1293, 1449, 1624, 1687, 1813, 1814, 2527
PspPI	GGNCC	4 cut(s)	683, 1253, 1448, 1812
PspPPI	RGGWCCY	1 cut(s)	1812
PstI	CTGCAG	1 cut(s)	1167
PsuI	RGATCY	2 cut(s)	922, 2622
PvuI	CGATCG	2 cut(s)	633, 998
RseI	CAYNNNNRTG	5 cut(s)	710, 957, 1917, 1944, 2343
SacI	GAGCTC	1 cut(s)	804
SacII	CCGCGG	1 cut(s)	221
SalI	GTCGAC	2 cut(s)	92, 605
SapI	GCTCTTC	2 cut(s)	1295, 1946
SaqAI	TTAA	4 cut(s)	1137, 2226, 2399, 2592
SatI	GCNGC	8 cut(s)	304, 394, 1158, 1163, 1335, 1557, 1890, 2217
Sau96I	GGNCC	4 cut(s)	683, 1253, 1448, 1812
ScaI	AGTACT	2 cut(s)	1152, 2093
SchI	GAGTC	5 cut(s)	458, 492, 942, 1682, 2510
ScrFI	CCNGG	3 cut(s)	350, 941, 2087
SduI	GDGCHC	6 cut(s)	230, 804, 1307, 1690, 1958, 2024
SexAI	ACCWGGT	1 cut(s)	939
SfaNI	GCATC	4 cut(s)	202, 206, 517, 2479
SfcI	CTRYAG	2 cut(s)	1163, 1423
Sfr274I	CTCGAG	1 cut(s)	500
Sfr303I	CCGCGG	1 cut(s)	221
SgrAI	CRCCGGYG	2 cut(s)	389, 611
SgrBI	CCGCGG	1 cut(s)	221
SinI	GGWCC	3 cut(s)	1253, 1448, 1812
SlaI	CTCGAG	1 cut(s)	500
SmiMI	CAYNNNNRTG	5 cut(s)	710, 957, 1917, 1944, 2343
SmlI	CTYRAG	4 cut(s)	500, 1429, 1691, 2387
SmoI	CTYRAG	4 cut(s)	500, 1429, 1691, 2387
SpeI	ACTAGT	1 cut(s)	2552
SspMI	CTAG	7 cut(s)	1148, 1211, 2169, 2213, 2553, 2574, 2580
SstI	GAGCTC	1 cut(s)	804
StyD4I	CCNGG	3 cut(s)	348, 939, 2085
StyI	CCWWGG	4 cut(s)	1416, 1856, 1989, 2055
TaaI	ACNGT	7 cut(s)	989, 1502, 1634, 1775, 2109, 2361, 2416
TaiI	ACGT	6 cut(s)	675, 1095, 1496, 1587, 1614, 1737
TaqII	GACCGA	1 cut(s)	849
TatI	WGTACW	5 cut(s)	1150, 1614, 1830, 2091, 2130
TauI	GCSGC	4 cut(s)	306, 396, 1559, 1892
TfiI	GAWTC	8 cut(s)	549, 666, 968, 1072, 1172, 1243, 1577, 2585
Tru1I	TTAA	4 cut(s)	1137, 2226, 2399, 2592
Tru9I	TTAA	4 cut(s)	1137, 2226, 2399, 2592
TscAI	CASTG	1 cut(s)	1921
TseFI	GTSAC	8 cut(s)	61, 382, 427, 1677, 1730, 1763, 2234, 2542
TseI	GCWGC	4 cut(s)	1157, 1162, 1334, 2216
Tsp45I	GTSAC	8 cut(s)	61, 382, 427, 1677, 1730, 1763, 2234, 2542
TspGWI	ACGGA	8 cut(s)	370, 415, 561, 1718, 2174, 2207, 2253, 2259
TspRI	CASTG	1 cut(s)	1921
VpaK11BI	GGWCC	3 cut(s)	1253, 1448, 1812
XapI	RAATTY	7 cut(s)	176, 275, 288, 311, 467, 741, 2569
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1854
XhoI	CTCGAG	1 cut(s)	500
XmiI	GTMKAC	3 cut(s)	93, 606, 1178
XspI	CTAG	7 cut(s)	1148, 1211, 2169, 2213, 2553, 2574, 2580
ZrmI	AGTACT	2 cut(s)	1152, 2093
Zsp2I	ATGCAT	1 cut(s)	2340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.